Pregenerated sensors for OMP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074006Ensembl transcript IDs: ENSMUST00000098281.4
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTCACAGCGGGCTGCTGCCGACACTGGGAGGAGAACCTTCCTGCTaGCAGAGGCTGGGCATTCGCCTCCTGGCTCCAGCTTTGGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: GHSGLLPTLGGEPSC*QRLGIRLLAPALAS Trigger: GCTGGCCAAAGCTGGAGCCAGGAGGCGAATGCCCAGCCTCTGGCAGCAGGAAGGTTCTCCTCCCAGTGTCGGCAGCAGCCCGCTGTGACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR GCA 90 bp | TTCGCCTCCTGGCTCCAGCTTTGGCCAGCAGGGCAAACGCCTTCTTaGCAGGTTCCCCGGAAGGTGTTCCTGTCCAGTCTCAGTCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: FASWLQLWPAGQTPS*QVPRKVFLSSLSLP Trigger: TGGGAGACTGAGACTGGACAGGAACACCTTCCGGGGAACCTGGCAAGAAGGCGTTTGCCCTGCTGGCCAAAGCTGGAGCCAGGAGGCGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR GCA 90 bp | GCAGTCCTGGCAGCTCACCAGCTGGGACAGATCCTACCTTCAGTATaGCCGAGGGAGGCAGCCTTGAGACAGTCAGGGGACACTGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: AVLAAHQLGQILPSV*PREAALRQSGDTAE Trigger: CTCAGCAGTGTCCCCTGACTGTCTCAAGGCTGCCTCCCTCGGGCATACTGAAGGTAGGATCTGTCCCAGCTGGTGAGCTGCCAGGACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR TCA 90 bp | GACACCGGTACCACAGCCTATCTCCTGCCTCCAGAATCCTGCACCTaGGCTGGGGTTTGCAGTCCTGGCAGCTCACCAGCTGGGACAGAT | + |
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Preference number: 1 (lower is better) Translates to: DTGTTAYLLPPESCT*AGVCSPGSSPAGTD Trigger: ATCTGTCCCAGCTGGTGAGCTGCCAGGACTGCAAACCCCAGCTCAGGTGCAGGATTCTGGAGGCAGGAGATAGGCTGTGGTACCGGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR GCA 90 bp | GGGTGTGGCTCCCTAGAGTCAGCAGAGTCCAGAAGCACCGGCCAGTaGTTCGGCAAGCATGTTATGGAGCAGAGGCACCGGCTCAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: GCGSLESAESRSTGQ*FGKHVMEQRHRLKR Trigger: TCTCTTGAGCCGGTGCCTCTGCTCCATAACATGCTTGCCGAAGCACTGGCCGGTGCTTCTGGACTCTGCTGACTCTAGGGAGCCACACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR CCA 90 bp | CGGTACCACAGCCTATCTCCTGCCTCCAGAATCCTGCACCTGAGCTaGGGTTTGCAGTCCTGGCAGCTCACCAGCTGGGACAGATCCTAC | + |
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Preference number: 1 (lower is better) Translates to: RYHSLSPASRILHLS*GLQSWQLTSWDRSY Trigger: GTAGGATCTGTCCCAGCTGGTGAGCTGCCAGGACTGCAAACCCCAGCTCAGGTGCAGGATTCTGGAGGCAGGAGATAGGCTGTGGTACCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR CCA 90 bp | TCTCCTGCCTCCAGAATCCTGCACCTGAGCTGGGGTTTGCAGTCCTaGCAGCTCACCAGCTGGGACAGATCCTACCTTCAGTATGCCCGA | + |
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Preference number: 1 (lower is better) Translates to: SPASRILHLSWGLQS*QLTSWDRSYLQYAR Trigger: TCGGGCATACTGAAGGTAGGATCTGTCCCAGCTGGTGAGCTGCCAGGACTGCAAACCCCAGCTCAGGTGCAGGATTCTGGAGGCAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR CCA 90 bp | CAGCAGAGTCCAGAAGCACCGGCCAGTGCTTCGGCAAGCATGTTATaGAGCAGAGGCACCGGCTCAAGAGACACCGGTACCACAGCCTAT | + |
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Preference number: 1 (lower is better) Translates to: QQSPEAPASASASML*SRGTGSRDTGTTAY Trigger: ATAGGCTGTGGTACCGGTGTCTCTTGAGCCGGTGCCTCTGCTCCATAACATGCTTGCCGAAGCACTGGCCGGTGCTTCTGGACTCTGCTG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR TCA 90 bp | AGGTTCCCCGGAAGGTGTTCCTGTCCAGTCTCAGTCTCCCATCCCTaGAGGGAGGAATCAGTGCTGGCCGTTTGCATCTCTTGGTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: RFPGRCSCPVSVSHP*REESVLAVCISWSV Trigger: GACTGACCAAGAGATGCAAACGGCCAGCACTGATTCCTCCCTTCAGGGATGGGAGACTGAGACTGGACAGGAACACCTTCCGGGGAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR CCA 90 bp | GGGACACTGCTGAGGTACCTCTGGCTGATGCTAGGTAACAGGCAATaGAAGGCTTTCAGGATGTGCAAGGCGAGGGACAATGAGACTTGG | + |
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Preference number: 1 (lower is better) Translates to: GTLLRYLWLMLGNRQ*KAFRMCKARDNETW Trigger: CCAAGTCTCATTGTCCCTCGCCTTGCACATCCTGAAAGCCTTCCATTGCCTGTTACCTAGCATCAGCCAGAGGTACCTCAGCAGTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR GCA 90 bp | GTTCCTGTCCAGTCTCAGTCTCCCATCCCTGAAGGGAGGAATCAGTaGTGGCCGTTTGCATCTCTTGGTCAGTCTCTTTATCTCTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: VPVQSQSPIPEGRNQ*WPFASLGQSLYLSV Trigger: GACTGAGAGATAAAGAGACTGACCAAGAGATGCAAACGGCCAGCACTGATTCCTCCCTTCAGGGATGGGAGACTGAGACTGGACAGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR CCA 90 bp | CATACAAATAGTTATGCCATCTCTCAATACCCATATGAGCGTGGGTaGCTAGAGTTGTTTCAGTTTCTACACGCTCTCTCACTTCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: HTNSYAISQYPYERG*LELFQFLHALSLLH Trigger: ATGGAGAAGTGAGAGAGCGTGTAGAAACTGAAACAACTCTAGCCACCCACGCTCATATGGGTATTGAGAGATGGCATAACTATTTGTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR CAA 90 bp | ATTCGCCTCCTGGCTCCAGCTTTGGCCAGCAGGGCAAACGCCTTCTaGCCAGGTTCCCCGGAAGGTGTTCCTGTCCAGTCTCAGTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: IRLLAPALASRANAF*PGSPEGVPVQSQSP Trigger: GGGAGACTGAGACTGGACAGGAACACCTTCCGGGGAACCTGGCAAGAAGGCGTTTGCCCTGCTGGCCAAAGCTGGAGCCAGGAGGCGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR CAA 90 bp | GGAAAAGCAGTCAGATCAAGCCCCGCTGTCATCCTGCCCAGTGTCTaGAAGGCCCTAAGGTCACAGCGGGCTGCTGCCGACACTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GKAVRSSPAVILPSV*KALRSQRAAADTGR Trigger: CCTCCCAGTGTCGGCAGCAGCCCGCTGTGACCTTAGGGCCTTCAAGACACTGGGCAGGATGACAGCGGGGCTTGATCTGACTGCTTTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCAGACGGATCCGAGTGAGGCAGAGTTGGGGCACAGGCAGTGTGAACCAAATCCTGCACCTGAGCTaGGGTTTGCAGTCCTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: QGRRIRVRQSWGTGSVNQILHLS*GLQSWQ Trigger: CTGCCAGGACTGCAAACCCCAGCTCAGGTGCAGGAT...TTGGTTCACACTGCCTGTGCCCCAACTCTGCCTCACTCGGATCCGTCTGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR CAA 90 bp | CACAGCCTATCTCCTGCCTCCAGAATCCTGCACCTGAGCTGGGGTTaGCAGTCCTGGCAGCTCACCAGCTGGGACAGATCCTACCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: HSLSPASRILHLSWG*QSWQLTSWDRSYLQ Trigger: CTGAAGGTAGGATCTGTCCCAGCTGGTGAGCTGCCAGGACTGCAAACCCCAGCTCAGGTGCAGGATTCTGGAGGCAGGAGATAGGCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR-3UTR TCA 90 bp | GGTCAGTCTCTTTATCTCTCAGTCCCGCTCTTCACCACAGGGGGCCCATCCATCCATGGGACATCACTGTaGGCCGCAGCACTGGCACCA | + |
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Preference number: 2 (lower is better) Translates to: GQSLYLSVPLFTTGGPSIHGTSL*AAALAP Trigger: TGGTGCCAGTGCTGCGGCTCACAGTGATGTCCCATG...GATGGATGGGCCCCCTGTGGTGAAGAGCGGGACTGAGAGATAAAGAGACTGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR-3UTR TCA 90 bp | GCACCTGAGCTGGGGTTTGCAGTCCTGGCAGCTCACCAGCTGGGACAGATCCTATCAGTCTCCCATCCCTaGAGGGAGGAATCAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: APELGFAVLAAHQLGQILSVSHP*REESVL Trigger: CAGCACTGATTCCTCCCTTCAGGGATGGGAGACTGA...TAGGATCTGTCCCAGCTGGTGAGCTGCCAGGACTGCAAACCCCAGCTCAGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR-3UTR CCA 90 bp | TCCCCGGAAGGTGTTCCTGTCCAGTCTCAGTCTCCCATCCCTGAAGGGAGGAATTGTGAGCCGCAGCACTaGCACCAGGGAAAAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: SPEGVPVQSQSPIPEGRNCEPQH*HQGKGG Trigger: CCCTCCTTTTCCCTGGTGCCAGTGCTGCGGCTCACA...ATTCCTCCCTTCAGGGATGGGAGACTGAGACTGGACAGGAACACCTTCCGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR-3UTR GCA 90 bp | CCTAGAGTCAGCAGAGTCCAGAAGCACCGGCCAGTGCTTCGGCAAGCATGTTATGGAGAACCTTCCTGCTaGCAGAGGCTGGGCATTCGC | + |
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Preference number: 2 (lower is better) Translates to: PRVSRVQKHRPVLRQACYGEPSC*QRLGIR Trigger: GCGAATGCCCAGCCTCTGGCAGCAGGAAGGTTCTCC...ATAACATGCTTGCCGAAGCACTGGCCGGTGCTTCTGGACTCTGCTGACTCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR-3UTR TCA 90 bp | ATGGGACATCACTGTGAGCCGCAGCACTGGCACCAGGGAAAAGGAGGGGATGTAGAACTCTGGCCAAGATaGGCACAGGAGGAGCAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: MGHHCEPQHWHQGKGGDVELWPR*AQEEQL Trigger: TAGCTGCTCCTCCTGTGCTCATCTTGGCCAGAGTTC...TACATCCCCTCCTTTTCCCTGGTGCCAGTGCTGCGGCTCACAGTGATGTCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR-3UTR GCA 90 bp | AGACCTGGAAAAGCAGTCAGATCAAGCCCCGCTGTCATCCTGCCCAGTGTCTTGGGAGGAGAACCTTCCTaGTGCCAGAGGCTGGGCATT | + |
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Preference number: 2 (lower is better) Translates to: RPGKAVRSSPAVILPSVLGGEPS*CQRLGI Trigger: AATGCCCAGCCTCTGGCAGCAGGAAGGTTCTCCTCC...CAAGACACTGGGCAGGATGACAGCGGGGCTTGATCTGACTGCTTTTCCAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR-3UTR CCA 90 bp | CCTAGAGTCAGCAGAGTCCAGAAGCACCGGCCAGTGCTTCGGCAAGCATGTTATGCTAGCTCAGAGCCCTaGACCCCTCTAACTCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: PRVSRVQKHRPVLRQACYASSEP*TPLTLL Trigger: TAGCAGAGTTAGAGGGGTCCAGGGCTCTGAGCTAGC...ATAACATGCTTGCCGAAGCACTGGCCGGTGCTTCTGGACTCTGCTGACTCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCAGACGGATCCGAGTGAGGCAGAGTTGGGGCACAGGCAGTGTGAACCAACCATATGAGCGTGGGTaGCTAGAGTTGTTTCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: QGRRIRVRQSWGTGSVNQPYERG*LELFQF Trigger: AAACTGAAACAACTCTAGCCACCCACGCTCATATGG...TTGGTTCACACTGCCTGTGCCCCAACTCTGCCTCACTCGGATCCGTCTGCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR-3UTR GCA 90 bp | AGACCTGGAAAAGCAGTCAGATCAAGCCCCGCTGTCATCCTGCCCAGTGTCTTGGAAGGGAGGAATCAGTaGTGGCCGTTTGCATCTCTT | + |
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Preference number: 2 (lower is better) Translates to: RPGKAVRSSPAVILPSVLEGRNQ*WPFASL Trigger: AAGAGATGCAAACGGCCAGCACTGATTCCTCCCTTC...CAAGACACTGGGCAGGATGACAGCGGGGCTTGATCTGACTGCTTTTCCAGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR-3UTR CCA 90 bp | ACGCCTCAGTCAGGATCACCTCCACCAAGTCCACAAGCCAGTACCAGCTCAATAAACCAGGCCCAGACCTaGAAAAGCAGTCAGATCAAG | + |
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Preference number: 2 (lower is better) Translates to: TPQSGSPPPSPQASTSSINQAQT*KSSQIK Trigger: CTTGATCTGACTGCTTTTCCAGGTCTGGGCCTGGTT...TATTGAGCTGGTACTGGCTTGTGGACTTGGTGGAGGTGATCCTGACTGAGGCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR GCA 72 bp | GGGCTGCTGCCGACACTGGGAGGAGAACCTTCCTGCTaGCAGAGGCTGGGCATTCGCCTCCTGGCTCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: GLLPTLGGEPSC*QRLGIRLLAPA Trigger: AGCTGGAGCCAGGAGGCGAATGCCCAGCCTCTGGCAGCAGGAAGGTTCTCCTCCCAGTGTCGGCAGCAGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR GCA 72 bp | AGCGGGCTGCTGCCGACACTGGGAGGAGAACCTTCCTaGTGCCAGAGGCTGGGCATTCGCCTCCTGGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: SGLLPTLGGEPS*CQRLGIRLLAP Trigger: TGGAGCCAGGAGGCGAATGCCCAGCCTCTGGCAGCAGGAAGGTTCTCCTCCCAGTGTCGGCAGCAGCCCGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR-3UTR CAA 90 bp | GGCTCCCTAGAGTCAGCAGAGTCCAGAAGCACCGGCCAGTGCTTCGGCAAGCATCACCTGAGCTGGGGTTaGCAGTCCTGGCAGCTCACC | + |
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Preference number: 3 (lower is better) Translates to: GSLESAESRSTGQCFGKHHLSWG*QSWQLT Trigger: GGTGAGCTGCCAGGACTGCAAACCCCAGCTCAGGTG...ATGCTTGCCGAAGCACTGGCCGGTGCTTCTGGACTCTGCTGACTCTAGGGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR TCA 72 bp | CCGGCTTCTAGACTACGGAGCCATGGGACATCACTGTaGGCCGCAGCACTGGCACCAGGGAAAAGGAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: PASRLRSHGTSL*AAALAPGKRRG Trigger: TCCCCTCCTTTTCCCTGGTGCCAGTGCTGCGGCTCACAGTGATGTCCCATGGCTCCGTAGTCTAGAAGCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR GCA 72 bp | TGGCTCCAGCTTTGGCCAGCAGGGCAAACGCCTTCTTaGCAGGTTCCCCGGAAGGTGTTCCTGTCCAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: WLQLWPAGQTPS*QVPRKVFLSSL Trigger: GAGACTGGACAGGAACACCTTCCGGGGAACCTGGCAAGAAGGCGTTTGCCCTGCTGGCCAAAGCTGGAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR GCA 72 bp | GCAGCTCACCAGCTGGGACAGATCCTACCTTCAGTATaGCCGAGGGAGGCAGCCTTGAGACAGTCAGGGGAC | + |
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Preference number: 3 (lower is better) Translates to: AAHQLGQILPSV*PREAALRQSGD Trigger: GTCCCCTGACTGTCTCAAGGCTGCCTCCCTCGGGCATACTGAAGGTAGGATCTGTCCCAGCTGGTGAGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR CCA 72 bp | TACGGAGCCATGGGACATCACTGTGAGCCGCAGCACTaGCACCAGGGAAAAGGAGGGGATGTAGCACTCGGG | + |
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Preference number: 3 (lower is better) Translates to: YGAMGHHCEPQH*HQGKGGDVALG Trigger: CCCGAGTGCTACATCCCCTCCTTTTCCCTGGTGCCAGTGCTGCGGCTCACAGTGATGTCCCATGGCTCCGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR CCA 72 bp | CTGAGCTGGGGTTTGCAGTCCTGGCAGCTCACCAGCTaGGACAGATCCTACCTTCAGTATGCCCGAGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: LSWGLQSWQLTS*DRSYLQYARGR Trigger: CCTCCCTCGGGCATACTGAAGGTAGGATCTGTCCCAGCTGGTGAGCTGCCAGGACTGCAAACCCCAGCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR CCA 72 bp | AGCCTATCTCCTGCCTCCAGAATCCTGCACCTGAGCTaGGGTTTGCAGTCCTGGCAGCTCACCAGCTGGGAC | + |
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Preference number: 3 (lower is better) Translates to: SLSPASRILHLS*GLQSWQLTSWD Trigger: GTCCCAGCTGGTGAGCTGCCAGGACTGCAAACCCCAGCTCAGGTGCAGGATTCTGGAGGCAGGAGATAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR CCA 72 bp | CCAGAAGCACCGGCCAGTGCTTCGGCAAGCATGTTATaGAGCAGAGGCACCGGCTCAAGAGACACCGGTACC | + |
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Preference number: 3 (lower is better) Translates to: PEAPASASASML*SRGTGSRDTGT Trigger: GGTACCGGTGTCTCTTGAGCCGGTGCCTCTGCTCCATAACATGCTTGCCGAAGCACTGGCCGGTGCTTCTGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR GCA 72 bp | CCGGCTCAAGAGACACCGGTACCACAGCCTATCTCCTaGCTCCAGAATCCTGCACCTGAGCTGGGGTTTGCA | + |
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Preference number: 3 (lower is better) Translates to: PAQETPVPQPIS*LQNPAPELGFA Trigger: TGCAAACCCCAGCTCAGGTGCAGGATTCTGGAGGCAGGAGATAGGCTGTGGTACCGGTGTCTCTTGAGCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR-3UTR CAA 90 bp | CCTAGAGTCAGCAGAGTCCAGAAGCACCGGCCAGTGCTTCGGCAAGCATGTTATCCGAGGGAGGCAGCCTaGAGACAGTCAGGGGACACT | + |
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Preference number: 3 (lower is better) Translates to: PRVSRVQKHRPVLRQACYPREAA*RQSGDT Trigger: AGTGTCCCCTGACTGTCTCAAGGCTGCCTCCCTCGG...ATAACATGCTTGCCGAAGCACTGGCCGGTGCTTCTGGACTCTGCTGACTCTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR CCA 72 bp | TCCAGAATCCTGCACCTGAGCTGGGGTTTGCAGTCCTaGCAGCTCACCAGCTGGGACAGATCCTACCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: SRILHLSWGLQS*QLTSWDRSYLQ Trigger: CTGAAGGTAGGATCTGTCCCAGCTGGTGAGCTGCCAGGACTGCAAACCCCAGCTCAGGTGCAGGATTCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR CCA 72 bp | GAAGAGAAGCAGAAAGGCAGAGGCACTGTCTGGGTGTaGCTCCCTAGAGTCAGCAGAGTCCAGAAGCACCGG | + |
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Preference number: 3 (lower is better) Translates to: EEKQKGRGTVWV*LPRVSRVQKHR Trigger: CCGGTGCTTCTGGACTCTGCTGACTCTAGGGAGCCACACCCAGACAGTGCCTCTGCCTTTCTGCTTCTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR CCA 72 bp | GCTCTTCACCACAGGGGGCCCATCCATCTTCCCACGTaGACCCAAAAGGCCTCTACAGTCTATAGTAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: ALHHRGPIHLPT*TQKASTVYSSS Trigger: GCTGCTACTATAGACTGTAGAGGCCTTTTGGGTCCACGTGGGAAGATGGATGGGCCCCCTGTGGTGAAGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR-3UTR CAA 90 bp | CCTAGAGTCAGCAGAGTCCAGAAGCACCGGCCAGTGCTTCGGCAAGCATGTTATACAGGGACATCACTGTaGCTAGCTCAGAGCCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: PRVSRVQKHRPVLRQACYTGTSL*LAQSPG Trigger: TCCAGGGCTCTGAGCTAGCAACAGTGATGTCCCTGT...ATAACATGCTTGCCGAAGCACTGGCCGGTGCTTCTGGACTCTGCTGACTCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR CCA 72 bp | CTGAGGTACCTCTGGCTGATGCTAGGTAACAGGCAATaGAAGGCTTTCAGGATGTGCAAGGCGAGGGACAAT | + |
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Preference number: 3 (lower is better) Translates to: LRYLWLMLGNRQ*KAFRMCKARDN Trigger: ATTGTCCCTCGCCTTGCACATCCTGAAAGCCTTCCATTGCCTGTTACCTAGCATCAGCCAGAGGTACCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR GCA 72 bp | CAGTCTCAGTCTCCCATCCCTGAAGGGAGGAATCAGTaGTGGCCGTTTGCATCTCTTGGTCAGTCTCTTTAT | + |
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Preference number: 3 (lower is better) Translates to: QSQSPIPEGRNQ*WPFASLGQSLY Trigger: ATAAAGAGACTGACCAAGAGATGCAAACGGCCAGCACTGATTCCTCCCTTCAGGGATGGGAGACTGAGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR CCA 72 bp | AGTTATGCCATCTCTCAATACCCATATGAGCGTGGGTaGCTAGAGTTGTTTCAGTTTCTACACGCTCTCTCA | + |
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Preference number: 3 (lower is better) Translates to: SYAISQYPYERG*LELFQFLHALS Trigger: TGAGAGAGCGTGTAGAAACTGAAACAACTCTAGCCACCCACGCTCATATGGGTATTGAGAGATGGCATAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| CDS-3UTR CCA 90 bp | CATTCGCCTCCTGGCTCCAGCTTTGGCCAGCAGGGCAAACGCCTTCTTGCCAGGCCTTGCGCCAGAAGATaGCGGCGGGGTCCAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: HSPPGSSFGQQGKRLLARPCARR*RRGPAA Trigger: AGCTGCTGGACCCCGCCGCCATCTTCTGGCGCAAGG...CCTGGCAAGAAGGCGTTTGCCCTGCTGGCCAAAGCTGGAGCCAGGAGGCGAATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| 3UTR CAA 72 bp | TGCCAGAGGCTGGGCATTCGCCTCCTGGCTCCAGCTTaGGCCAGCAGGGCAAACGCCTTCTTGCCAGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: CQRLGIRLLAPA*ASRANAFLPGS Trigger: GGAACCTGGCAAGAAGGCGTTTGCCCTGCTGGCCAAAGCTGGAGCCAGGAGGCGAATGCCCAGCCTCTGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
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| CDS-3UTR GCA 90 bp | GGCATTCGCCTCCTGGCTCCAGCTTTGGCCAGCAGGGCAAACGCCTTCTTGCCACGTCGGAGTCTTCCTTaGGCCAGAAGATGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GIRLLAPALASRANAFLPRRSLP*ARRWRR Trigger: CCGCCGCCATCTTCTGGCGCAAGGAAGACTCCGACG...TGGCAAGAAGGCGTTTGCCCTGCTGGCCAAAGCTGGAGCCAGGAGGCGAATGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS-3UTR GCA 90 bp | GCACCTGAGCTGGGGTTTGCAGTCCTGGCAGCTCACCAGCTGGGACAGATCCTATCGGGCGTCCAGTTCTaGGAGGTGCCCGTGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: APELGFAVLAAHQLGQILSGVQF*EVPVMV Trigger: CACCATCACGGGCACCTCGCAGAACTGGACGCCCGA...TAGGATCTGTCCCAGCTGGTGAGCTGCCAGGACTGCAAACCCCAGCTCAGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS-3UTR CCA 90 bp | CAGGGCAGACGGATCCGAGTGAGGCAGAGTTGGGGCACAGGCAGTGTGAACCAATGCTGGGTCAGGTCCTaGTCCAGAACCAGCGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: QGRRIRVRQSWGTGSVNQCWVRS*SRTSGI Trigger: GATGCCGCTGGTTCTGGACCAGGACCTGACCCAGCA...TTGGTTCACACTGCCTGTGCCCCAACTCTGCCTCACTCGGATCCGTCTGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| 3UTR CAA 72 bp | TCTCCTGCCTCCAGAATCCTGCACCTGAGCTGGGGTTaGCAGTCCTGGCAGCTCACCAGCTGGGACAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: SPASRILHLSWG*QSWQLTSWDRS Trigger: GGATCTGTCCCAGCTGGTGAGCTGCCAGGACTGCAAACCCCAGCTCAGGTGCAGGATTCTGGAGGCAGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS-3UTR GCA 90 bp | GAAGGCCCTAAGGTCACAGCGGGCTGCTGCCGACACTGGGAGGAGAACCTTCCTTTCTTCTCCCCACGCTaGTTCAGGCTCTCTACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: EGPKVTAGCCRHWEENLPFFSPR*FRLSTR Trigger: CCGAGTAGAGAGCCTGAAGCAGCGTGGGGAGAAGAA...AGGAAGGTTCTCCTCCCAGTGTCGGCAGCAGCCCGCTGTGACCTTAGGGCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS-3UTR CCA 90 bp | TGCACCAAGGACGCCTCAGTCAGGATCACCTCCACCAAGTCCACAAGCCAGTACCGGAGCCGCATCTGCTaGGTCAGGTCCTGGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CTKDASVRITSTKSTSQYRSRIC*VRSWSR Trigger: TCTGGACCAGGACCTGACCCAGCAGATGCGGCTCCG...GTACTGGCTTGTGGACTTGGTGGAGGTGATCCTGACTGAGGCGTCCTTGGTGCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS-3UTR GCA 90 bp | CCTAGAGTCAGCAGAGTCCAGAAGCACCGGCCAGTGCTTCGGCAAGCATGTTATAGCGGCATCTCCAGCTaGTGCTTCTGCGGCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PRVSRVQKHRPVLRQACYSGISS*CFCGPS Trigger: GGATGGGCCGCAGAAGCAGCAGCTGGAGATGCCGCT...ATAACATGCTTGCCGAAGCACTGGCCGGTGCTTCTGGACTCTGCTGACTCTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| 3UTR CAA 72 bp | CAGATCCTACCTTCAGTATGCCCGAGGGAGGCAGCCTaGAGACAGTCAGGGGACACTGCTGAGGTACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QILPSVCPREAA*RQSGDTAEVPL Trigger: CAGAGGTACCTCAGCAGTGTCCCCTGACTGTCTCAAGGCTGCCTCCCTCGGGCATACTGAAGGTAGGATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS-3UTR TCA 90 bp | TCCCAGTTCAAAAAGCACTGCACCAAGGACGCCTCAGTCAGGATCACCTCCACCGCTTCTGCTGCTGGATaGAATCGAGGCGGTAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: SQFKKHCTKDASVRITSTASAAG*NRGGRR Trigger: CCGTCTACCGCCTCGATTTCATCCAGCAGCAGAAGC...GGTGGAGGTGATCCTGACTGAGGCGTCCTTGGTGCAGTGCTTTTTGAACTGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS-3UTR GCA 90 bp | TGCACCAAGGACGCCTCAGTCAGGATCACCTCCACCAAGTCCACAAGCCAGTACAGCTTCTCACCATCCTaGTTCTTCTCCCCACGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CTKDASVRITSTKSTSQYSFSPS*FFSPRC Trigger: GCAGCGTGGGGAGAAGAAGCAGGATGGTGAGAAGCT...GTACTGGCTTGTGGACTTGGTGGAGGTGATCCTGACTGAGGCGTCCTTGGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS-3UTR CCA 90 bp | GGCCGTTTGCATCTCTTGGTCAGTCTCTTTATCTCTCAGTCCCGCTCTTCACCAGCGGGGTCCAGCAGCTaGCGTGTCATGAGGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRLHLLVSLFISQSRSSPAGSSS*RVMRLV Trigger: CACCAACCTCATGACACGCCAGCTGCTGGACCCCGC...TGGTGAAGAGCGGGACTGAGAGATAAAGAGACTGACCAAGAGATGCAAACGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| 3UTR CAA 72 bp | CTCCCATCCCTGAAGGGAGGAATCAGTGCTGGCCGTTaGCATCTCTTGGTCAGTCTCTTTATCTCTCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSLKGGISAGR*HLLVSLFISQS Trigger: GGACTGAGAGATAAAGAGACTGACCAAGAGATGCAAACGGCCAGCACTGATTCCTCCCTTCAGGGATGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS-3UTR GCA 90 bp | CTACACCATTCGAGTCTCAGTCTCCCAGTTCAAAAAGCACTGCACCAAGGACGCAAACTCCAGGGCGTCTaGCTCATTCCAATCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LHHSSLSLPVQKALHQGRKLQGV*LIPIHG Trigger: GCCATGGATTGGAATGAGGCAGACGCCCTGGAGTTT...GCGTCCTTGGTGCAGTGCTTTTTGAACTGGGAGACTGAGACTCGAATGGTGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| 3UTR CAA 72 bp | CTGAAGGGAGGAATCAGTGCTGGCCGTTTGCATCTCTaGGTCAGTCTCTTTATCTCTCAGTCCCGCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKGGISAGRLHL*VSLFISQSRSS Trigger: TGAAGAGCGGGACTGAGAGATAAAGAGACTGACCAAGAGATGCAAACGGCCAGCACTGATTCCTCCCTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS-3UTR CCA 90 bp | ACTCTGCTACACCATTCGAGTCTCAGTCTCCCAGTTCAAAAAGCACTGCACCAACCTCATTCCAATCCATaGCGTCGGAGTCTTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLLHHSSLSLPVQKALHQPHSNP*RRSLPC Trigger: GCAAGGAAGACTCCGACGCCATGGATTGGAATGAGG...TTGGTGCAGTGCTTTTTGAACTGGGAGACTGAGACTCGAATGGTGTAGCAGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS-3UTR GCA 90 bp | ACTCTGCTACACCATTCGAGTCTCAGTCTCCCAGTTCAAAAAGCACTGCACCAATCGAACTGCAGCTTCTaGTGCTGGATGAAATCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLLHHSSLSLPVQKALHQSNCSF*CWMKSR Trigger: CCTCGATTTCATCCAGCAGCAGAAGCTGCAGTTCGA...TTGGTGCAGTGCTTTTTGAACTGGGAGACTGAGACTCGAATGGTGTAGCAGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| 3UTR CAA 72 bp | ATCTCTCAATACCCATATGAGCGTGGGTGGCTAGAGTaGTTTCAGTTTCTACACGCTCTCTCACTTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ISQYPYERGWLE*FQFLHALSLLH Trigger: ATGGAGAAGTGAGAGAGCGTGTAGAAACTGAAACAACTCTAGCCACCCACGCTCATATGGGTATTGAGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS CCA 90 bp | TCGGAGTCTTCCTTGCGCCAGAAGATGGCGGCGGGGTCCAGCAGCTaGCGTGTCATGAGGTTGGTGAGGTCGGGCGTCCAGTTCTGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SESSLRQKMAAGSSS*RVMRLVRSGVQFCE Trigger: CTCGCAGAACTGGACGCCCGACCTCACCAACCTCATGACACGCCAGCTGCTGGACCCCGCCGCCATCTTCTGGCGCAAGGAAGACTCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS GCA 90 bp | GCCGGCCGGATCAGCTTCTCACCATCCTGCTTCTTCTCCCCACGCTaGTTCAGGCTCTCTACTCGGAGCCGCATCTGCTGGGTCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AGRISFSPSCFFSPR*FRLSTRSRICWVRS Trigger: GGACCTGACCCAGCAGATGCGGCTCCGAGTAGAGAGCCTGAAGCAGCGTGGGGAGAAGAAGCAGGATGGTGAGAAGCTGATCCGGCCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS GCA 90 bp | AGCAGCTGGCGTGTCATGAGGTTGGTGAGGTCGGGCGTCCAGTTCTaGGAGGTGCCCGTGATGGTGACCTTGCCGGGCTTGTCCAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: SSWRVMRLVRSGVQF*EVPVMVTLPGLSRT Trigger: GGTTCTGGACAAGCCCGGCAAGGTCACCATCACGGGCACCTCGCAGAACTGGACGCCCGACCTCACCAACCTCATGACACGCCAGCTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS CCA 90 bp | TGCTTCAGGCTCTCTACTCGGAGCCGCATCTGCTGGGTCAGGTCCTaGTCCAGAACCAGCGGCATCTCCAGCTGCTGCTTCTGCGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CFRLSTRSRICWVRS*SRTSGISSCCFCGP Trigger: TGGGCCGCAGAAGCAGCAGCTGGAGATGCCGCTGGTTCTGGACCAGGACCTGACCCAGCAGATGCGGCTCCGAGTAGAGAGCCTGAAGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS CCA 90 bp | TTCTCCCCACGCTGCTTCAGGCTCTCTACTCGGAGCCGCATCTGCTaGGTCAGGTCCTGGTCCAGAACCAGCGGCATCTCCAGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSPRCFRLSTRSRIC*VRSWSRTSGISSCC Trigger: GCAGCAGCTGGAGATGCCGCTGGTTCTGGACCAGGACCTGACCCAGCAGATGCGGCTCCGAGTAGAGAGCCTGAAGCAGCGTGGGGAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS GCA 90 bp | TTCTTCTCCCCACGCTGCTTCAGGCTCTCTACTCGGAGCCGCATCTaGTGGGTCAGGTCCTGGTCCAGAACCAGCGGCATCTCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FFSPRCFRLSTRSRI*WVRSWSRTSGISSC Trigger: GCAGCTGGAGATGCCGCTGGTTCTGGACCAGGACCTGACCCAGCAGATGCGGCTCCGAGTAGAGAGCCTGAAGCAGCGTGGGGAGAAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS CCA 90 bp | AAAGGCGCTCCCCAAACTCCAGGGCGTCTGCCTCATTCCAATCCATaGCGTCGGAGTCTTCCTTGCGCCAGAAGATGGCGGCGGGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KGAPQTPGRLPHSNP*RRSLPCARRWRRGP Trigger: TGGACCCCGCCGCCATCTTCTGGCGCAAGGAAGACTCCGACGCCATGGATTGGAATGAGGCAGACGCCCTGGAGTTTGGGGAGCGCCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS-3UTR CAA 90 bp | GCACCTGAGCTGGGGTTTGCAGTCCTGGCAGCTCACCAGCTGGGACAGATCCTATGGCGTGTCATGAGGTaGGTGAGGTCGGGCGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: APELGFAVLAAHQLGQILWRVMR*VRSGVQ Trigger: CTGGACGCCCGACCTCACCAACCTCATGACACGCCA...TAGGATCTGTCCCAGCTGGTGAGCTGCCAGGACTGCAAACCCCAGCTCAGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS-3UTR CAA 90 bp | GCTGCCAGAGGCTGGGCATTCGCCTCCTGGCTCCAGCTTTGGCCAGCAGGGCAAATGACCTTGCGGATCTaGGCCAGATCAGAAAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AARGWAFASWLQLWPAGQMTLRI*ARSERR Trigger: GCGCCTTTCTGATCTGGCCAAGATCCGCAAGGTCAT...TTGCCCTGCTGGCCAAAGCTGGAGCCAGGAGGCGAATGCCCAGCCTCTGGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS-3UTR CAA 90 bp | TCCCCGGAAGGTGTTCCTGTCCAGTCTCAGTCTCCCATCCCTGAAGGGAGGAATGTGACCTTGCCGGGCTaGTCCAGAACCACGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPEGVPVQSQSPIPEGRNVTLPG*SRTTFQ Trigger: CTGGAACGTGGTTCTGGACAAGCCCGGCAAGGTCAC...ATTCCTCCCTTCAGGGATGGGAGACTGAGACTGGACAGGAACACCTTCCGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS-3UTR CAA 90 bp | CCTAGAGTCAGCAGAGTCCAGAAGCACCGGCCAGTGCTTCGGCAAGCATGTTATCCCGTGATGGTGACCTaGCCGGGCTTGTCCAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: PRVSRVQKHRPVLRQACYPVMVT*PGLSRT Trigger: GGTTCTGGACAAGCCCGGCAAGGTCACCATCACGGG...ATAACATGCTTGCCGAAGCACTGGCCGGTGCTTCTGGACTCTGCTGACTCTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS GCA 90 bp | GATCTTGGCCAGATCAGAAAGGCGCTCCCCAAACTCCAGGGCGTCTaGCTCATTCCAATCCATGGCGTCGGAGTCTTCCTTGCGCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: DLGQIRKALPKLQGV*LIPIHGVGVFLAPE Trigger: TTCTGGCGCAAGGAAGACTCCGACGCCATGGATTGGAATGAGGCAGACGCCCTGGAGTTTGGGGAGCGCCTTTCTGATCTGGCCAAGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS-3UTR CAA 90 bp | CTACACCATTCGAGTCTCAGTCTCCCAGTTCAAAAAGCACTGCACCAAGGACGCGCGTCGGAGTCTTCCTaGCGCCAGAAGATGGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LHHSSLSLPVQKALHQGRASESS*RQKMAA Trigger: CGCCGCCATCTTCTGGCGCAAGGAAGACTCCGACGC...GCGTCCTTGGTGCAGTGCTTTTTGAACTGGGAGACTGAGACTCGAATGGTGTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS-3UTR CAA 90 bp | GCACAACACCAGCGAGCAGCAAATGCCAGCCTTCCTAACAGGGACATCACTGTTACAGAGGCCTTTAGGTaGGCAGGCTCCACGCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: AQHQRAANASLPNRDITVTEAFR*AGSTPS Trigger: CGAGGGCGTGGAGCCTGCCAACCTAAAGGCCTCTGT...AACAGTGATGTCCCTGTTAGGAAGGCTGGCATTTGCTGCTCGCTGGTGTTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS-3UTR CAA 90 bp | TACTCCTCACCAGGACTAGCCCTCAGGCCCACATCCATACAAATAGTTATGCCAAGGAAATACATGACCTaGCGGATCTTGGCCAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: YSSPGLALRPTSIQIVMPRKYMT*RILARS Trigger: TGATCTGGCCAAGATCCGCAAGGTCATGTATTTCCT...TGGCATAACTATTTGTATGGATGTGGGCCTGAGGGCTAGTCCTGGTGAGGAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS CAA 72 bp | ATGGCGGCGGGGTCCAGCAGCTGGCGTGTCATGAGGTaGGTGAGGTCGGGCGTCCAGTTCTGCGAGGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: MAAGSSSWRVMR*VRSGVQFCEVP Trigger: GGGCACCTCGCAGAACTGGACGCCCGACCTCACCAACCTCATGACACGCCAGCTGCTGGACCCCGCCGCCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS CAA 90 bp | CGCCAGAAGATGGCGGCGGGGTCCAGCAGCTGGCGTGTCATGAGGTaGGTGAGGTCGGGCGTCCAGTTCTGCGAGGTGCCCGTGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RQKMAAGSSSWRVMR*VRSGVQFCEVPVMV Trigger: CACCATCACGGGCACCTCGCAGAACTGGACGCCCGACCTCACCAACCTCATGACACGCCAGCTGCTGGACCCCGCCGCCATCTTCTGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS CCA 72 bp | TCCTTGCGCCAGAAGATGGCGGCGGGGTCCAGCAGCTaGCGTGTCATGAGGTTGGTGAGGTCGGGCGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLRQKMAAGSSS*RVMRLVRSGVQ Trigger: CTGGACGCCCGACCTCACCAACCTCATGACACGCCAGCTGCTGGACCCCGCCGCCATCTTCTGGCGCAAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS GCA 72 bp | CCACGCTGCTTCAGGCTCTCTACTCGGAGCCGCATCTaGTGGGTCAGGTCCTGGTCCAGAACCAGCGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: PRCFRLSTRSRI*WVRSWSRTSGI Trigger: GATGCCGCTGGTTCTGGACCAGGACCTGACCCAGCAGATGCGGCTCCGAGTAGAGAGCCTGAAGCAGCGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS GCA 72 bp | CGTGTCATGAGGTTGGTGAGGTCGGGCGTCCAGTTCTaGGAGGTGCCCGTGATGGTGACCTTGCCGGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RVMRLVRSGVQF*EVPVMVTLPGL Trigger: CAAGCCCGGCAAGGTCACCATCACGGGCACCTCGCAGAACTGGACGCCCGACCTCACCAACCTCATGACACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS CCA 72 bp | CGCTGCTTCAGGCTCTCTACTCGGAGCCGCATCTGCTaGGTCAGGTCCTGGTCCAGAACCAGCGGCATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RCFRLSTRSRIC*VRSWSRTSGIS Trigger: GGAGATGCCGCTGGTTCTGGACCAGGACCTGACCCAGCAGATGCGGCTCCGAGTAGAGAGCCTGAAGCAGCG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS CCA 72 bp | CCCCAAACTCCAGGGCGTCTGCCTCATTCCAATCCATaGCGTCGGAGTCTTCCTTGCGCCAGAAGATGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PQTPGRLPHSNP*RRSLPCARRWR Trigger: CCGCCATCTTCTGGCGCAAGGAAGACTCCGACGCCATGGATTGGAATGAGGCAGACGCCCTGGAGTTTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS TCA 72 bp | CGTTCCAGTGATCGAACTGCAGCTTCTGCTGCTGGATaGAATCGAGGCGGTAGACGGACTCAGCCGGCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: RSSDRTAASAAG*NRGGRRTQPAG Trigger: TCCGGCCGGCTGAGTCCGTCTACCGCCTCGATTTCATCCAGCAGCAGAAGCTGCAGTTCGATCACTGGAACG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS CAA 90 bp | ACGCCCTCGCCAAAGGTGATGAGGAAATACATGACCTTGCGGATCTaGGCCAGATCAGAAAGGCGCTCCCCAAACTCCAGGGCGTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TPSPKVMRKYMTLRI*ARSERRSPNSRASA Trigger: GGCAGACGCCCTGGAGTTTGGGGAGCGCCTTTCTGATCTGGCCAAGATCCGCAAGGTCATGTATTTCCTCATCACCTTTGGCGAGGGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS CAA 90 bp | GCAGGCTCCACGCCCTCGCCAAAGGTGATGAGGAAATACATGACCTaGCGGATCTTGGCCAGATCAGAAAGGCGCTCCCCAAACTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AGSTPSPKVMRKYMT*RILARSERRSPNSR Trigger: CCTGGAGTTTGGGGAGCGCCTTTCTGATCTGGCCAAGATCCGCAAGGTCATGTATTTCCTCATCACCTTTGGCGAGGGCGTGGAGCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS GCA 72 bp | ATCAGCTTCTCACCATCCTGCTTCTTCTCCCCACGCTaGTTCAGGCTCTCTACTCGGAGCCGCATCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ISFSPSCFFSPR*FRLSTRSRICW Trigger: CCAGCAGATGCGGCTCCGAGTAGAGAGCCTGAAGCAGCGTGGGGAGAAGAAGCAGGATGGTGAGAAGCTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS GCA 72 bp | CAGATCAGAAAGGCGCTCCCCAAACTCCAGGGCGTCTaGCTCATTCCAATCCATGGCGTCGGAGTCTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: QIRKALPKLQGV*LIPIHGVGVFL Trigger: AAGGAAGACTCCGACGCCATGGATTGGAATGAGGCAGACGCCCTGGAGTTTGGGGAGCGCCTTTCTGATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS TCA 72 bp | GTGACCTTGCCGGGCTTGTCCAGAACCACGTTCCAGTaGTCGAACTGCAGCTTCTGCTGCTGGATGAAATCG | + |
|
Preference number: 6 (lower is better) Translates to: VTLPGLSRTTFQ*SNCSFCCWMKS Trigger: CGATTTCATCCAGCAGCAGAAGCTGCAGTTCGATCACTGGAACGTGGTTCTGGACAAGCCCGGCAAGGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||
| CDS CAA 72 bp | ACGCCCTCGCCAAAGGTGATGAGGAAATACATGACCTaGCGGATCTTGGCCAGATCAGAAAGGCGCTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TPSPKVMRKYMT*RILARSERRSP Trigger: TGGGGAGCGCCTTTCTGATCTGGCCAAGATCCGCAAGGTCATGTATTTCCTCATCACCTTTGGCGAGGGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098281.4 |
||