Pregenerated sensors for OMG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049612Ensembl transcript IDs: ENSMUST00000164465.3
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGTGTGAGCATTTATTTACAGTGACAGCCTTGGTTTCACTTAAGTaGCAAAACCCTTTTGAGTGGCTCACGTTTCATTCACCTTACAGA | + |
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Preference number: 1 (lower is better) Translates to: WCEHLFTVTALVSLK*QNPFEWLTFHSPYR Trigger: TCTGTAAGGTGAATGAAACGTGAGCCACTCAAAAGGGTTTTGCCACTTAAGTGAAACCAAGGCTGTCACTGTAAATAAATGCTCACACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| 3UTR TCA 90 bp | AAATTTTCCCTGTTAAGATGCCAAGCTAAGAGCCTCCTAGCCTTTTaGAGAGCAGTTGTCCATTATATAATCTGCAGACTAGCAAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: KFSLLRCQAKSLLAF*RAVVHYIICRLARV Trigger: GACTCTTGCTAGTCTGCAGATTATATAATGGACAACTGCTCTTCAAAAGGCTAGGAGGCTCTTAGCTTGGCATCTTAACAGGGAAAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| 3UTR-3UTR TCA 90 bp | CTCACGTTTCATTCACCTTACAGACTTCATCTTCCCTACAGCAAAAGCTGTGATTGTCTAGAGACCACGTaGCACAGCCAGGAGCATAGG | + |
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Preference number: 2 (lower is better) Translates to: LTFHSPYRLHLPYSKSCDCLETT*HSQEHR Trigger: CCTATGCTCCTGGCTGTGTCACGTGGTCTCTAGACA...ATCACAGCTTTTGCTGTAGGGAAGATGAAGTCTGTAAGGTGAATGAAACGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| 3UTR-3UTR CCA 90 bp | CACAGCCAGGAGCATAGGCCTTTTATTTTGTCCCAGACATTTGACAGTGTAAACCCCAACTGTACATCATaGAGGAAGGTTCTCCTTCGT | + |
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Preference number: 2 (lower is better) Translates to: HSQEHRPFILSQTFDSVNPNCTS*RKVLLR Trigger: ACGAAGGAGAACCTTCCTCCATGATGTACAGTTGGG...GTTTACACTGTCAAATGTCTGGGACAAAATAAAAGGCCTATGCTCCTGGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| 3UTR-3UTR CAA 90 bp | TTGAAGAGCAGTTGTCCATTATATAATCTGCAGACTAGCAAGAGTCCCTCAGAATTTACAGTGACAGCCTaGGTTTCACTTAAGTGGCAA | + |
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Preference number: 3 (lower is better) Translates to: LKSSCPLYNLQTSKSPSEFTVTA*VSLKWQ Trigger: TTGCCACTTAAGTGAAACCAAGGCTGTCACTGTAAA...TTCTGAGGGACTCTTGCTAGTCTGCAGATTATATAATGGACAACTGCTCTTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR TCA 90 bp | AGCTTGAATCACTGGTTAGATAGGGGCACGTTTTCCCAACTGTACATCATGGAGTGCCACGAGCTATGCTaGGGGTCACGGGGCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SLNHWLDRGTFSQLYIMECHELC*GSRGLG Trigger: CCCCAAGCCCCGTGACCCTCAGCATAGCTCGTGGCA...CTCCATGATGTACAGTTGGGAAAACGTGCCCCTATCTAACCAGTGATTCAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CCA 90 bp | TCCCAACTGTACATCATGGAGGAAGGTTCTCCTTCGTTTCAGAAACTGCAGACCTGTGGGTGTGTCTTCTaGGTAGGCCACCACAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SQLYIMEEGSPSFQKLQTCGCVF*VGHHSP Trigger: AGGGCTGTGGTGGCCTACCCAGAAGACACACCCACA...GGTCTGCAGTTTCTGAAACGAAGGAGAACCTTCCTCCATGATGTACAGTTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR GCA 90 bp | AGGGGCACGTTTTCCCAACTGTACATCATGGAGGAAGGTTCTCCTTCGTTTCAGCCGAGTGTTTCCATTTaGAGTGGTTTCTTCCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: RGTFSQLYIMEEGSPSFQPSVSI*SGFFPP Trigger: CGGAGGGAAGAAACCACTGCAAATGGAAACACTCGG...CTGAAACGAAGGAGAACCTTCCTCCATGATGTACAGTTGGGAAAACGTGCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR TCA 90 bp | AGCAGTTGTCCATTATATAATCTGCAGACTAGCAAGAGTCCCTCAGAAGCAGGACTTCCCTCCGTAAGTTaGGGGTTGTGCTTTGTCGAG | + |
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Preference number: 4 (lower is better) Translates to: SSCPLYNLQTSKSPSEAGLPSVS*GLCFVE Trigger: CTCGACAAAGCACAACCCTCAACTTACGGAGGGAAG...TCCTGCTTCTGAGGGACTCTTGCTAGTCTGCAGATTATATAATGGACAACTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR TCA 90 bp | CTCACGTTTCATTCACCTTACAGACTTCATCTTCCCTACAGCAAAAGCTGTGATAGAGACCGAGGTAACTaGGCAGGCAGACTTTCAAGC | + |
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Preference number: 4 (lower is better) Translates to: LTFHSPYRLHLPYSKSCDRDRGN*AGRLSS Trigger: GCTTGAAAGTCTGCCTGCTCAGTTACCTCGGTCTCT...ATCACAGCTTTTGCTGTAGGGAAGATGAAGTCTGTAAGGTGAATGAAACGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR GCA 90 bp | CTCACGTTTCATTCACCTTACAGACTTCATCTTCCCTACAGCAAAAGCTGTGATCAGTCCACATGCCTGTaGCTCTCTGTGCATGTACAC | + |
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Preference number: 4 (lower is better) Translates to: LTFHSPYRLHLPYSKSCDQSTCL*LSVHVH Trigger: GTGTACATGCACAGAGAGGCACAGGCATGTGGACTG...ATCACAGCTTTTGCTGTAGGGAAGATGAAGTCTGTAAGGTGAATGAAACGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR GCA 90 bp | ACCCTTTTGAGTGGCTCACGTTTCATTCACCTTACAGACTTCATCTTCCCTACAGAGGTGTGGGGTACATaGTCTGTTCCTTTAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: TLLSGSRFIHLTDFIFPTEVWGT*SVPLER Trigger: CCTCTCTAAAGGAACAGAGCATGTACCCCACACCTC...TGTAGGGAAGATGAAGTCTGTAAGGTGAATGAAACGTGAGCCACTCAAAAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR TCA 90 bp | TCCCAACTGTACATCATGGAGGAAGGTTCTCCTTCGTTTCAGAAACTGCAGACCTTCAAGCCTGTTGTTTaGAATATCCAGGGTTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SQLYIMEEGSPSFQKLQTFKPVV*NIQGSQ Trigger: CTGAGAACCCTGGATATTTCAAACAACAGGCTTGAA...GGTCTGCAGTTTCTGAAACGAAGGAGAACCTTCCTCCATGATGTACAGTTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR GCA 90 bp | ATGATGTGGTGTGAGCATTTATTTACAGTGACAGCCTTGGTTTCACTTAAGTGGCCTGAACAGTCCACATaGCTGTGCCTCTCTGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: MMWCEHLFTVTALVSLKWPEQST*LCLSVH Trigger: ATGCACAGAGAGGCACAGGCATGTGGACTGTTCAGG...CCACTTAAGTGAAACCAAGGCTGTCACTGTAAATAAATGCTCACACCACATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CCA 90 bp | GGCTCACGTTTCATTCACCTTACAGACTTCATCTTCCCTACAGCAAAAGCTGTGGTTTGGAAGGCATGTTaGTTGGAACTGTCCAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: GSRFIHLTDFIFPTAKAVVWKAC*LELSKA Trigger: AGCTTTGGACAGTTCCAACCAACATGCCTTCCAAAC...CACAGCTTTTGCTGTAGGGAAGATGAAGTCTGTAAGGTGAATGAAACGTGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CCA 90 bp | AGGGGCACGTTTTCCCAACTGTACATCATGGAGGAAGGTTCTCCTTCGTTTCAGTTCCTCGATATTGTTTaGGTGTTTTGGTCACTTTGG | + |
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Preference number: 4 (lower is better) Translates to: RGTFSQLYIMEEGSPSFQFLDIV*VFWSLW Trigger: CCAAAGTGACCAAAACACCCAAACAATATCGAGGAA...CTGAAACGAAGGAGAACCTTCCTCCATGATGTACAGTTGGGAAAACGTGCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CCA 90 bp | CACAGCCAGGAGCATAGGCCTTTTATTTTGTCCCAGACATTTGACAGTGTAAACGCAGCTGCTGCTTCATaGGAATTGGTCATTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: HSQEHRPFILSQTFDSVNAAAAS*ELVISV Trigger: CACAGAAATGACCAATTCCCATGAAGCAGCAGCTGC...GTTTACACTGTCAAATGTCTGGGACAAAATAAAAGGCCTATGCTCCTGGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR TCA 90 bp | GGCTCACGTTTCATTCACCTTACAGACTTCATCTTCCCTACAGCAAAAGCTGTGTTGGTCACTTTGGGTTaGGTTACCATACTCAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: GSRFIHLTDFIFPTAKAVLVTLG*VTILKE Trigger: CTCTTTGAGTATGGTAACTCAACCCAAAGTGACCAA...CACAGCTTTTGCTGTAGGGAAGATGAAGTCTGTAAGGTGAATGAAACGTGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR GCA 90 bp | CTCACGTTTCATTCACCTTACAGACTTCATCTTCCCTACAGCAAAAGCTGTGATGACAGGTCCACGATATaGAGTTTGGAAGGCATGTTG | + |
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Preference number: 4 (lower is better) Translates to: LTFHSPYRLHLPYSKSCDDRSTI*SLEGML Trigger: CAACATGCCTTCCAAACTGCATATCGTGGACCTGTC...ATCACAGCTTTTGCTGTAGGGAAGATGAAGTCTGTAAGGTGAATGAAACGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR GCA 90 bp | TCCCAACTGTACATCATGGAGGAAGGTTCTCCTTCGTTTCAGAAACTGCAGACCATGGTGTCCACTGTCTaGATCTCACTCATAGTAAAT | + |
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Preference number: 4 (lower is better) Translates to: SQLYIMEEGSPSFQKLQTMVSTV*ISLIVN Trigger: ATTTACTATGAGTGAGATGCAGACAGTGGACACCAT...GGTCTGCAGTTTCTGAAACGAAGGAGAACCTTCCTCCATGATGTACAGTTGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CCA 90 bp | AGCTTGAATCACTGGTTAGATAGGGGCACGTTTTCCCAACTGTACATCATGGAGTCTGTGCATGTACACTaGAGAGGACAAATGCATAAG | + |
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Preference number: 4 (lower is better) Translates to: SLNHWLDRGTFSQLYIMESVHVH*RGQMHK Trigger: CTTATGCATTTGTCCTCTCCAGTGTACATGCACAGA...CTCCATGATGTACAGTTGGGAAAACGTGCCCCTATCTAACCAGTGATTCAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CCA 90 bp | AGGGGCACGTTTTCCCAACTGTACATCATGGAGGAAGGTTCTCCTTCGTTTCAGGTATATGGGGTTAACTaGTTATGCAGATCAGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: RGTFSQLYIMEEGSPSFQVYGVN*LCRSVK Trigger: CTTTACTGATCTGCATAACCAGTTAACCCCATATAC...CTGAAACGAAGGAGAACCTTCCTCCATGATGTACAGTTGGGAAAACGTGCCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CCA 90 bp | GAGTCCCTCAGAAGCAGGACATTGTTTAGATTGGAAGTAGTTCTGTCTTGTGTGCCAGGGTTCTCAGATTaGTATATGGGGTTAACTGGT | + |
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Preference number: 4 (lower is better) Translates to: ESLRSRTLFRLEVVLSCVPGFSD*YMGLTG Trigger: ACCAGTTAACCCCATATACCAATCTGAGAACCCTGG...CACACAAGACAGAACTACTTCCAATCTAAACAATGTCCTGCTTCTGAGGGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CCA 90 bp | ACCCTTTTGAGTGGCTCACGTTTCATTCACCTTACAGACTTCATCTTCCCTACACTGCTTCATGGGAATTaGTCATTTCTGTGGGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: TLLSGSRFIHLTDFIFPTLLHGN*SFLWVC Trigger: ACACACCCACAGAAATGACCAATTCCCATGAAGCAG...TGTAGGGAAGATGAAGTCTGTAAGGTGAATGAAACGTGAGCCACTCAAAAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CCA 90 bp | GGCTCACGTTTCATTCACCTTACAGACTTCATCTTCCCTACAGCAAAAGCTGTGTGTTTCCATTTGCAGTaGTTTCTTCCCTCCGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: GSRFIHLTDFIFPTAKAVCFHLQ*FLPSVS Trigger: ACTTACGGAGGGAAGAAACCACTGCAAATGGAAACA...CACAGCTTTTGCTGTAGGGAAGATGAAGTCTGTAAGGTGAATGAAACGTGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR TCA 90 bp | GGCTCACGTTTCATTCACCTTACAGACTTCATCTTCCCTACAGCAAAAGCTGTGGACCACCTGTTATTATaGAGAGTTATCTCTTGCAAC | + |
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Preference number: 4 (lower is better) Translates to: GSRFIHLTDFIFPTAKAVDHLLL*RVISCN Trigger: GTTGCAAGAGATAACTCTTCATAATAACAGGTGGTC...CACAGCTTTTGCTGTAGGGAAGATGAAGTCTGTAAGGTGAATGAAACGTGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR TCA 90 bp | GAGTCCCTCAGAAGCAGGACATTGTTTAGATTGGAAGTAGTTCTGTCTTGTGTGTATCTTTGCTTAGAGTaGCACCAAATGTGGTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: ESLRSRTLFRLEVVLSCVYLCLE*HQMWFP Trigger: AGGAAACCACATTTGGTGTCACTCTAAGCAAAGATA...CACACAAGACAGAACTACTTCCAATCTAAACAATGTCCTGCTTCTGAGGGACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CCA 90 bp | TTGAAGAGCAGTTGTCCATTATATAATCTGCAGACTAGCAAGAGTCCCTCAGAAGGAAGGCATGTTGGTTaGAACTGTCCAAAGCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: LKSSCPLYNLQTSKSPSEGRHVG*NCPKLV Trigger: AACAAGCTTTGGACAGTTCCAACCAACATGCCTTCC...TTCTGAGGGACTCTTGCTAGTCTGCAGATTATATAATGGACAACTGCTCTTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CCA 90 bp | TTGAAGAGCAGTTGTCCATTATATAATCTGCAGACTAGCAAGAGTCCCTCAGAACCACGATATGCAGTTTaGAAGGCATGTTGGTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: LKSSCPLYNLQTSKSPSEPRYAV*KACWLE Trigger: TTCCAACCAACATGCCTTCCAAACTGCATATCGTGG...TTCTGAGGGACTCTTGCTAGTCTGCAGATTATATAATGGACAACTGCTCTTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| 3UTR CAA 72 bp | ATGATGTGGTGTGAGCATTTATTTACAGTGACAGCCTaGGTTTCACTTAAGTGGCAAAACCCTTTTGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: MMWCEHLFTVTA*VSLKWQNPFEW Trigger: CCACTCAAAAGGGTTTTGCCACTTAAGTGAAACCAAGGCTGTCACTGTAAATAAATGCTCACACCACATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR TCA 90 bp | GAGTCCCTCAGAAGCAGGACATTGTTTAGATTGGAAGTAGTTCTGTCTTGTGTGGCAGGTAAAGATGTGTaGGATTTGTCAGGTTTATTA | + |
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Preference number: 4 (lower is better) Translates to: ESLRSRTLFRLEVVLSCVAGKDV*DLSGLL Trigger: TAATAAACCTGACAAATCTCACACATCTTTACCTGC...CACACAAGACAGAACTACTTCCAATCTAAACAATGTCCTGCTTCTGAGGGACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR TCA 90 bp | CTTGTGTGTAAAACAATGATGTGGTGTGAGCATTTATTTACAGTGACAGCCTTGATTCCATCCTGGAGGTaGATAGTTAGAGTTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LVCKTMMWCEHLFTVTALIPSWR*IVRVAA Trigger: AGCTGCAACTCTAACTATTCACCTCCAGGATGGAAT...CAAGGCTGTCACTGTAAATAAATGCTCACACCACATCATTGTTTTACACACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CCA 90 bp | ACCCTTTTGAGTGGCTCACGTTTCATTCACCTTACAGACTTCATCTTCCCTACAATTGTTTGGGTGTTTTaGTCACTTTGGGTTGAGTTA | + |
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Preference number: 4 (lower is better) Translates to: TLLSGSRFIHLTDFIFPTIVWVF*SLWVEL Trigger: TAACTCAACCCAAAGTGACCAAAACACCCAAACAAT...TGTAGGGAAGATGAAGTCTGTAAGGTGAATGAAACGTGAGCCACTCAAAAGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CCA 90 bp | CTTGTGTGTAAAACAATGATGTGGTGTGAGCATTTATTTACAGTGACAGCCTTGAATTGGTCATTTCTGTaGGTGTGTCTTCTGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LVCKTMMWCEHLFTVTALNWSFL*VCLLGR Trigger: CCTACCCAGAAGACACACCCACAGAAATGACCAATT...CAAGGCTGTCACTGTAAATAAATGCTCACACCACATCATTGTTTTACACACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CCA 90 bp | ATGATGTGGTGTGAGCATTTATTTACAGTGACAGCCTTGGTTTCACTTAAGTGGTTCAGAGAAGTTATTTaGCATGCCACGAGCTATGCT | + |
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Preference number: 4 (lower is better) Translates to: MMWCEHLFTVTALVSLKWFREVI*HATSYA Trigger: AGCATAGCTCGTGGCATGCCAAATAACTTCTCTGAA...CCACTTAAGTGAAACCAAGGCTGTCACTGTAAATAAATGCTCACACCACATCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR TCA 90 bp | GTGTGTAAAACAATGATGTGGTGTGAGCATTTATTTACAGTGACAGCCTTGGTTAAGGATTTGTGTCAGTaGGTTATTAGACAGGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: VCKTMMWCEHLFTVTALVKDLCQ*VIRQVH Trigger: GTGGACCTGTCTAATAACTCACTGACACAAATCCTT...AACCAAGGCTGTCACTGTAAATAAATGCTCACACCACATCATTGTTTTACACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CCA 90 bp | CTTTTGAAGAGCAGTTGTCCATTATATAATCTGCAGACTAGCAAGAGTCCCTCATGCAACTGCAAAAGTTaGTCAAAAGACTGTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LLKSSCPLYNLQTSKSPSCNCKS*SKDCSG Trigger: TCCAGAACAGTCTTTTGACCAACTTTTGCAGTTGCA...TGAGGGACTCTTGCTAGTCTGCAGATTATATAATGGACAACTGCTCTTCAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CCA 90 bp | ATGATGTGGTGTGAGCATTTATTTACAGTGACAGCCTTGGTTTCACTTAAGTGGGTGTTTTGGTCACTTTaGGTTGAGTTACCATACTCA | + |
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Preference number: 4 (lower is better) Translates to: MMWCEHLFTVTALVSLKWVFWSL*VELPYS Trigger: TGAGTATGGTAACTCAACCCAAAGTGACCAAAACAC...CCACTTAAGTGAAACCAAGGCTGTCACTGTAAATAAATGCTCACACCACATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR TCA 90 bp | CTTGTGTGTAAAACAATGATGTGGTGTGAGCATTTATTTACAGTGACAGCCTTGTTGTTTATGGTCACATaGCCACCTGTTATTATGAAG | + |
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Preference number: 4 (lower is better) Translates to: LVCKTMMWCEHLFTVTALLFMVT*PPVIMK Trigger: CTTCATAATAACAGGTGGTCATGTGACCATAAACAA...CAAGGCTGTCACTGTAAATAAATGCTCACACCACATCATTGTTTTACACACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR GCA 90 bp | GTGTGTAAAACAATGATGTGGTGTGAGCATTTATTTACAGTGACAGCCTTGGTTGTTATCTCTTGCAACTaGAAAAGTTGGTCAAAAGAC | + |
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Preference number: 4 (lower is better) Translates to: VCKTMMWCEHLFTVTALVVISCN*KSWSKD Trigger: GTCTTTTGACCAACTTTTGCAGTTGCAAGAGATAAC...AACCAAGGCTGTCACTGTAAATAAATGCTCACACCACATCATTGTTTTACACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CCA 90 bp | CTGCCTGAACAGTCCACATGCCTGTGCCTCTCTGTGCATGTACACTaGAGAGGACAAATGCATAAGATGCCAGGCGTGAGAAACAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: LPEQSTCLCLSVHVH*RGQMHKMPGVRNRR Trigger: CCTTCTGTTTCTCACGCCTGGCATCTTATGCATTTGTCCTCTCCAGTGTACATGCACAGAGAGGCACAGGCATGTGGACTGTTCAGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CCA 90 bp | AGCTGCTGCTTCATGGGAATTGGTCATTTCTGTGGGTGTGTCTTCTaGGTAGGCCACCACAGCCCTATCAGTGCTACTAAAAGTGGTATC | + |
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Preference number: 5 (lower is better) Translates to: SCCFMGIGHFCGCVF*VGHHSPISATKSGI Trigger: GATACCACTTTTAGTAGCACTGATAGGGCTGTGGTGGCCTACCCAGAAGACACACCCACAGAAATGACCAATTCCCATGAAGCAGCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CAA 90 bp | AGGGGCACGTTTTCCCAACTGTACATCATGGAGGAAGGTTCTCCTTCGTTTCAGTCTTCCCTCCGTAAGTaGAGGGTTGTGCTTTGTCGA | + |
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Preference number: 5 (lower is better) Translates to: RGTFSQLYIMEEGSPSFQSSLRK*RVVLCR Trigger: TCGACAAAGCACAACCCTCAACTTACGGAGGGAAGA...CTGAAACGAAGGAGAACCTTCCTCCATGATGTACAGTTGGGAAAACGTGCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CAA 90 bp | GGCTCACGTTTCATTCACCTTACAGACTTCATCTTCCCTACAGCAAAAGCTGTGGCCGAGTGTTTCCATTaGCAGTGGTTTCTTCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: GSRFIHLTDFIFPTAKAVAECFH*QWFLPS Trigger: GGAGGGAAGAAACCACTGCAAATGGAAACACTCGGC...CACAGCTTTTGCTGTAGGGAAGATGAAGTCTGTAAGGTGAATGAAACGTGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS TCA 90 bp | GTGGCCGAGTGTTTCCATTTGCAGTGGTTTCTTCCCTCCGTAAGTTaGGGGTTGTGCTTTGTCGAGGCATTTCAGAGAAGTTATTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: VAECFHLQWFLPSVS*GLCFVEAFQRSYLA Trigger: TGCCAAATAACTTCTCTGAAATGCCTCGACAAAGCACAACCCTCAACTTACGGAGGGAAGAAACCACTGCAAATGGAAACACTCGGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS GCA 90 bp | GGTGGTAATGTAGTCAAGTTTCTGCCTGAACAGTCCACATGCCTGTaGCTCTCTGTGCATGTACACTGGAGAGGACAAATGCATAAGATG | + |
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Preference number: 5 (lower is better) Translates to: GGNVVKFLPEQSTCL*LSVHVHWRGQMHKM Trigger: CATCTTATGCATTTGTCCTCTCCAGTGTACATGCACAGAGAGGCACAGGCATGTGGACTGTTCAGGCAGAAACTTGACTACATTACCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CAA 90 bp | GGCTCACGTTTCATTCACCTTACAGACTTCATCTTCCCTACAGCAAAAGCTGTGTGGAAGGCATGTTGGTaGGAACTGTCCAAAGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: GSRFIHLTDFIFPTAKAVWKACW*ELSKAC Trigger: ACAAGCTTTGGACAGTTCCAACCAACATGCCTTCCA...CACAGCTTTTGCTGTAGGGAAGATGAAGTCTGTAAGGTGAATGAAACGTGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CAA 90 bp | AGCTTGAATCACTGGTTAGATAGGGGCACGTTTTCCCAACTGTACATCATGGAGGTTGAGGGTTGTGCTTaGTCGAGGCATTTCAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: SLNHWLDRGTFSQLYIMEVEGCA*SRHFRE Trigger: TTCTCTGAAATGCCTCGACAAAGCACAACCCTCAAC...CTCCATGATGTACAGTTGGGAAAACGTGCCCCTATCTAACCAGTGATTCAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CCA 90 bp | GTTATTAGACAGGTCCACGATATGCAGTTTGGAAGGCATGTTGGTTaGAACTGTCCAAAGCTTGTTACTGCTGAGGTTAAGAACCTCGAG | + |
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Preference number: 5 (lower is better) Translates to: VIRQVHDMQFGRHVG*NCPKLVTAEVKNLE Trigger: CTCGAGGTTCTTAACCTCAGCAGTAACAAGCTTTGGACAGTTCCAACCAACATGCCTTCCAAACTGCATATCGTGGACCTGTCTAATAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CAA 90 bp | CACAGCCAGGAGCATAGGCCTTTTATTTTGTCCCAGACATTTGACAGTGTAAACAGTTTGGAAGGCATGTaGGTTGGAACTGTCCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: HSQEHRPFILSQTFDSVNSLEGM*VGTVQS Trigger: GCTTTGGACAGTTCCAACCAACATGCCTTCCAAACT...GTTTACACTGTCAAATGTCTGGGACAAAATAAAAGGCCTATGCTCCTGGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CAA 90 bp | CTCACGTTTCATTCACCTTACAGACTTCATCTTCCCTACAGCAAAAGCTGTGATGCTGCTTCATGGGAATaGGTCATTTCTGTGGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: LTFHSPYRLHLPYSKSCDAASWE*VISVGV Trigger: CACACCCACAGAAATGACCAATTCCCATGAAGCAGC...ATCACAGCTTTTGCTGTAGGGAAGATGAAGTCTGTAAGGTGAATGAAACGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS TCA 90 bp | ATATTGTTGTTAGCAGCAGACATGTTCCAGAGAGACCGAGGTAACTaGGCAGGCAGACTTTCAAGCCTGTTGTTTGAAATATCCAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: ILLLAADMFQRDRGN*AGRLSSLLFEISRV Trigger: AACCCTGGATATTTCAAACAACAGGCTTGAAAGTCTGCCTGCTCAGTTACCTCGGTCTCTCTGGAACATGTCTGCTGCTAACAACAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS GCA 90 bp | CCTGGAAGGATTTGTGTCAGTGAGTTATTAGACAGGTCCACGATATaGAGTTTGGAAGGCATGTTGGTTGGAACTGTCCAAAGCTTGTTA | + |
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Preference number: 5 (lower is better) Translates to: PGRICVSELLDRSTI*SLEGMLVGTVQSLL Trigger: TAACAAGCTTTGGACAGTTCCAACCAACATGCCTTCCAAACTGCATATCGTGGACCTGTCTAATAACTCACTGACACAAATCCTTCCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CAA 90 bp | CACAGCCAGGAGCATAGGCCTTTTATTTTGTCCCAGACATTTGACAGTGTAAACTTTCAGAGAAGTTATTaGGCATGCCACGAGCTATGC | + |
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Preference number: 5 (lower is better) Translates to: HSQEHRPFILSQTFDSVNFQRSY*ACHELC Trigger: GCATAGCTCGTGGCATGCCAAATAACTTCTCTGAAA...GTTTACACTGTCAAATGTCTGGGACAAAATAAAAGGCCTATGCTCCTGGCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CAA 90 bp | GGCTCACGTTTCATTCACCTTACAGACTTCATCTTCCCTACAGCAAAAGCTGTGTTTGGTCACTTTGGGTaGAGTTACCATACTCAAAGA | + |
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Preference number: 5 (lower is better) Translates to: GSRFIHLTDFIFPTAKAVFGHFG*SYHTQR Trigger: TCTTTGAGTATGGTAACTCAACCCAAAGTGACCAAA...CACAGCTTTTGCTGTAGGGAAGATGAAGTCTGTAAGGTGAATGAAACGTGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS TCA 90 bp | GTTTCCTTTCCTCGATATTGTTTGGGTGTTTTGGTCACTTTGGGTTaGGTTACCATACTCAAAGAGTTAATGGTGTCCACTGTCTGCATC | + |
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Preference number: 5 (lower is better) Translates to: VSFPRYCLGVLVTLG*VTILKELMVSTVCI Trigger: GATGCAGACAGTGGACACCATTAACTCTTTGAGTATGGTAACTCAACCCAAAGTGACCAAAACACCCAAACAATATCGAGGAAAGGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CAA 90 bp | GTGTGTAAAACAATGATGTGGTGTGAGCATTTATTTACAGTGACAGCCTTGGTTTCCAGGGTTCTCAGATaGGTATATGGGGTTAACTGG | + |
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Preference number: 5 (lower is better) Translates to: VCKTMMWCEHLFTVTALVSRVLR*VYGVNW Trigger: CCAGTTAACCCCATATACCAATCTGAGAACCCTGGA...AACCAAGGCTGTCACTGTAAATAAATGCTCACACCACATCATTGTTTTACACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CAA 90 bp | ATGATGTGGTGTGAGCATTTATTTACAGTGACAGCCTTGGTTTCACTTAAGTGGGGAACTGTCCAAAGCTaGTTACTGCTGAGGTTAAGA | + |
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Preference number: 5 (lower is better) Translates to: MMWCEHLFTVTALVSLKWGTVQS*LLLRLR Trigger: TCTTAACCTCAGCAGTAACAAGCTTTGGACAGTTCC...CCACTTAAGTGAAACCAAGGCTGTCACTGTAAATAAATGCTCACACCACATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CAA 90 bp | ACCCTTTTGAGTGGCTCACGTTTCATTCACCTTACAGACTTCATCTTCCCTACATTTCCTCGATATTGTTaGGGTGTTTTGGTCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TLLSGSRFIHLTDFIFPTFPRYC*GVLVTL Trigger: CAAAGTGACCAAAACACCCAAACAATATCGAGGAAA...TGTAGGGAAGATGAAGTCTGTAAGGTGAATGAAACGTGAGCCACTCAAAAGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CAA 90 bp | CTTTTGAAGAGCAGTTGTCCATTATATAATCTGCAGACTAGCAAGAGTCCCTCATTGCAACTGCAAAAGTaGGTCAAAAGACTGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLKSSCPLYNLQTSKSPSLQLQK*VKRLFW Trigger: CCAGAACAGTCTTTTGACCAACTTTTGCAGTTGCAA...TGAGGGACTCTTGCTAGTCTGCAGATTATATAATGGACAACTGCTCTTCAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CAA 90 bp | TTGAAGAGCAGTTGTCCATTATATAATCTGCAGACTAGCAAGAGTCCCTCAGAAAGACTTTCAAGCCTGTaGTTTGAAATATCCAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LKSSCPLYNLQTSKSPSERLSSL*FEISRV Trigger: AACCCTGGATATTTCAAACAACAGGCTTGAAAGTCT...TTCTGAGGGACTCTTGCTAGTCTGCAGATTATATAATGGACAACTGCTCTTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS-3UTR CAA 90 bp | GTGTGTAAAACAATGATGTGGTGTGAGCATTTATTTACAGTGACAGCCTTGGTTTTTCAAGCCTGTTGTTaGAAATATCCAGGGTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: VCKTMMWCEHLFTVTALVFQACC*KYPGFS Trigger: TGAGAACCCTGGATATTTCAAACAACAGGCTTGAAA...AACCAAGGCTGTCACTGTAAATAAATGCTCACACCACATCATTGTTTTACACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CCA 90 bp | AAGAGTTATCTCTTGCAACTGCAAAAGTTGGTCAAAAGACTGTTCTaGAATGAATGTGAATTTATTGTTGTGCAGGTAAAGATGTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KSYLLQLQKLVKRLF*NECEFIVVQVKMCE Trigger: CTCACACATCTTTACCTGCACAACAATAAATTCACATTCATTCCAGAACAGTCTTTTGACCAACTTTTGCAGTTGCAAGAGATAACTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CCA 72 bp | CAGTCCACATGCCTGTGCCTCTCTGTGCATGTACACTaGAGAGGACAAATGCATAAGATGCCAGGCGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: QSTCLCLSVHVH*RGQMHKMPGVR Trigger: TCTCACGCCTGGCATCTTATGCATTTGTCCTCTCCAGTGTACATGCACAGAGAGGCACAGGCATGTGGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CCA 72 bp | GGTTGTGCTTTGTCGAGGCATTTCAGAGAAGTTATTTaGCATGCCACGAGCTATGCTGAGGGTCACGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: GCALSRHFREVI*HATSYAEGHGA Trigger: AGCCCCGTGACCCTCAGCATAGCTCGTGGCATGCCAAATAACTTCTCTGAAATGCCTCGACAAAGCACAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS GCA 72 bp | GTAGTCAAGTTTCTGCCTGAACAGTCCACATGCCTGTaGCTCTCTGTGCATGTACACTGGAGAGGACAAATG | + |
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Preference number: 6 (lower is better) Translates to: VVKFLPEQSTCL*LSVHVHWRGQM Trigger: CATTTGTCCTCTCCAGTGTACATGCACAGAGAGGCACAGGCATGTGGACTGTTCAGGCAGAAACTTGACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS GCA 72 bp | GGTAATGTAGTCAAGTTTCTGCCTGAACAGTCCACATaGCTGTGCCTCTCTGTGCATGTACACTGGAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: GNVVKFLPEQST*LCLSVHVHWRG Trigger: TCCTCTCCAGTGTACATGCACAGAGAGGCACAGGCATGTGGACTGTTCAGGCAGAAACTTGACTACATTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CAA 90 bp | GGTGGCCGAGTGTTTCCATTTGCAGTGGTTTCTTCCCTCCGTAAGTaGAGGGTTGTGCTTTGTCGAGGCATTTCAGAGAAGTTATTTGGC | + |
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Preference number: 6 (lower is better) Translates to: GGRVFPFAVVSSLRK*RVVLCRGISEKLFG Trigger: GCCAAATAACTTCTCTGAAATGCCTCGACAAAGCACAACCCTCAACTTACGGAGGGAAGAAACCACTGCAAATGGAAACACTCGGCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CCA 72 bp | TTCATGGGAATTGGTCATTTCTGTGGGTGTGTCTTCTaGGTAGGCCACCACAGCCCTATCAGTGCTACTAAA | + |
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Preference number: 6 (lower is better) Translates to: FMGIGHFCGCVF*VGHHSPISATK Trigger: TTTAGTAGCACTGATAGGGCTGTGGTGGCCTACCCAGAAGACACACCCACAGAAATGACCAATTCCCATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CCA 72 bp | CAGGTCCACGATATGCAGTTTGGAAGGCATGTTGGTTaGAACTGTCCAAAGCTTGTTACTGCTGAGGTTAAG | + |
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Preference number: 6 (lower is better) Translates to: QVHDMQFGRHVG*NCPKLVTAEVK Trigger: CTTAACCTCAGCAGTAACAAGCTTTGGACAGTTCCAACCAACATGCCTTCCAAACTGCATATCGTGGACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CAA 72 bp | TTAGACAGGTCCACGATATGCAGTTTGGAAGGCATGTaGGTTGGAACTGTCCAAAGCTTGTTACTGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LDRSTICSLEGM*VGTVQSLLLLR Trigger: CCTCAGCAGTAACAAGCTTTGGACAGTTCCAACCAACATGCCTTCCAAACTGCATATCGTGGACCTGTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CAA 72 bp | GTGTTTCCATTTGCAGTGGTTTCTTCCCTCCGTAAGTaGAGGGTTGTGCTTTGTCGAGGCATTTCAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VFPFAVVSSLRK*RVVLCRGISEK Trigger: CTTCTCTGAAATGCCTCGACAAAGCACAACCCTCAACTTACGGAGGGAAGAAACCACTGCAAATGGAAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS TCA 72 bp | TTAGCAGCAGACATGTTCCAGAGAGACCGAGGTAACTaGGCAGGCAGACTTTCAAGCCTGTTGTTTGAAATA | + |
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Preference number: 6 (lower is better) Translates to: LAADMFQRDRGN*AGRLSSLLFEI Trigger: TATTTCAAACAACAGGCTTGAAAGTCTGCCTGCTCAGTTACCTCGGTCTCTCTGGAACATGTCTGCTGCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS TCA 72 bp | TGTTTCCATTTGCAGTGGTTTCTTCCCTCCGTAAGTTaGGGGTTGTGCTTTGTCGAGGCATTTCAGAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: CFHLQWFLPSVS*GLCFVEAFQRS Trigger: ACTTCTCTGAAATGCCTCGACAAAGCACAACCCTCAACTTACGGAGGGAAGAAACCACTGCAAATGGAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CAA 72 bp | GTCAGTGAGTTATTAGACAGGTCCACGATATGCAGTTaGGAAGGCATGTTGGTTGGAACTGTCCAAAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VSELLDRSTICS*EGMLVGTVQSL Trigger: CAAGCTTTGGACAGTTCCAACCAACATGCCTTCCAAACTGCATATCGTGGACCTGTCTAATAACTCACTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CAA 90 bp | AGTGAGTTATTAGACAGGTCCACGATATGCAGTTTGGAAGGCATGTaGGTTGGAACTGTCCAAAGCTTGTTACTGCTGAGGTTAAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: SELLDRSTICSLEGM*VGTVQSLLLLRLRT Trigger: GGTTCTTAACCTCAGCAGTAACAAGCTTTGGACAGTTCCAACCAACATGCCTTCCAAACTGCATATCGTGGACCTGTCTAATAACTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CAA 90 bp | AGGATTTGTGTCAGTGAGTTATTAGACAGGTCCACGATATGCAGTTaGGAAGGCATGTTGGTTGGAACTGTCCAAAGCTTGTTACTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RICVSELLDRSTICS*EGMLVGTVQSLLLL Trigger: CAGCAGTAACAAGCTTTGGACAGTTCCAACCAACATGCCTTCCAAACTGCATATCGTGGACCTGTCTAATAACTCACTGACACAAATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CAA 72 bp | AGTTTGGAAGGCATGTTGGTTGGAACTGTCCAAAGCTaGTTACTGCTGAGGTTAAGAACCTCGAGACTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLEGMLVGTVQS*LLLRLRTSRLL Trigger: AAGAAGTCTCGAGGTTCTTAACCTCAGCAGTAACAAGCTTTGGACAGTTCCAACCAACATGCCTTCCAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CAA 90 bp | ACGATATGCAGTTTGGAAGGCATGTTGGTTGGAACTGTCCAAAGCTaGTTACTGCTGAGGTTAAGAACCTCGAGACTTCTTAGGGTATTT | + |
|
Preference number: 6 (lower is better) Translates to: TICSLEGMLVGTVQS*LLLRLRTSRLLRVF Trigger: AAATACCCTAAGAAGTCTCGAGGTTCTTAACCTCAGCAGTAACAAGCTTTGGACAGTTCCAACCAACATGCCTTCCAAACTGCATATCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS GCA 72 bp | ATTTGTGTCAGTGAGTTATTAGACAGGTCCACGATATaGAGTTTGGAAGGCATGTTGGTTGGAACTGTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: ICVSELLDRSTI*SLEGMLVGTVQ Trigger: TTGGACAGTTCCAACCAACATGCCTTCCAAACTGCATATCGTGGACCTGTCTAATAACTCACTGACACAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CAA 90 bp | GGTTTCCTTTCCTCGATATTGTTTGGGTGTTTTGGTCACTTTGGGTaGAGTTACCATACTCAAAGAGTTAATGGTGTCCACTGTCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GFLSSILFGCFGHFG*SYHTQRVNGVHCLH Trigger: ATGCAGACAGTGGACACCATTAACTCTTTGAGTATGGTAACTCAACCCAAAGTGACCAAAACACCCAAACAATATCGAGGAAAGGAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CAA 72 bp | TCCTCGATATTGTTTGGGTGTTTTGGTCACTTTGGGTaGAGTTACCATACTCAAAGAGTTAATGGTGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SSILFGCFGHFG*SYHTQRVNGVH Trigger: GTGGACACCATTAACTCTTTGAGTATGGTAACTCAACCCAAAGTGACCAAAACACCCAAACAATATCGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CAA 90 bp | GGCAGACTTTCAAGCCTGTTGTTTGAAATATCCAGGGTTCTCAGATaGGTATATGGGGTTAACTGGTTATGCAGATCAGTAAAGTGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: GRLSSLLFEISRVLR*VYGVNWLCRSVKWL Trigger: TAACCACTTTACTGATCTGCATAACCAGTTAACCCCATATACCAATCTGAGAACCCTGGATATTTCAAACAACAGGCTTGAAAGTCTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CCA 72 bp | ATGTGGTTTCCTTTCCTCGATATTGTTTGGGTGTTTTaGTCACTTTGGGTTGAGTTACCATACTCAAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: MWFPFLDIVWVF*SLWVELPYSKS Trigger: ACTCTTTGAGTATGGTAACTCAACCCAAAGTGACCAAAACACCCAAACAATATCGAGGAAAGGAAACCACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS GCA 72 bp | GTTACCATACTCAAAGAGTTAATGGTGTCCACTGTCTaGATCTCACTCATAGTAAATAAGCTTGAGGTAAAC | + |
|
Preference number: 6 (lower is better) Translates to: VTILKELMVSTV*ISLIVNKLEVN Trigger: GTTTACCTCAAGCTTATTTACTATGAGTGAGATGCAGACAGTGGACACCATTAACTCTTTGAGTATGGTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS CCA 72 bp | CTCTTGCAACTGCAAAAGTTGGTCAAAAGACTGTTCTaGAATGAATGTGAATTTATTGTTGTGCAGGTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLQLQKLVKRLF*NECEFIVVQVK Trigger: CTTTACCTGCACAACAATAAATTCACATTCATTCCAGAACAGTCTTTTGACCAACTTTTGCAGTTGCAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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| CDS TCA 72 bp | ATGTTTTGTTTATGGTCACATGACCACCTGTTATTATaGAGAGTTATCTCTTGCAACTGCAAAAGTTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: MFCLWSHDHLLL*RVISCNCKSWS Trigger: TGACCAACTTTTGCAGTTGCAAGAGATAACTCTTCATAATAACAGGTGGTCATGTGACCATAAACAAAACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164465.3 |
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