Pregenerated sensors for OMA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035069Ensembl transcript IDs: ENSMUST00000035780.4
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | ATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTCCGCAAGCTAGCCTTTTCTaGGGCGTGCCCCAGGACTGC | + |
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Preference number: 4 (lower is better) Translates to: IRKRSTVLLMEPTIHPLPQASLF*GVPQDC Trigger: GCAGTCCTGGGGCACGCCGCAGAAAAGGCTAGCTTG...CGGAAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR CCA 90 bp | ATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTCCGTACGGCAGGACAGCTTaGAGAACAGGAGGCCGCGAG | + |
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Preference number: 4 (lower is better) Translates to: IRKRSTVLLMEPTIHPLPYGRTA*RTGGRE Trigger: CTCGCGGCCTCCTGTTCTCCAAGCTGTCCTGCCGTA...CGGAAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR CCA 90 bp | ATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTCCGGCGTGTGCGATCTCATaGCCCAGGAGGAAGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: IRKRSTVLLMEPTIHPLPACAIS*PRRKDS Trigger: GCTGTCCTTCCTCCTGGGCCATGAGATCGCACACGC...CGGAAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR TCA 90 bp | GTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTGGGACTGGGGCAGCCTaGACCCTTGCAGATGTACGG | + |
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Preference number: 4 (lower is better) Translates to: VIRKRSTVLLMEPTIHPLGTGAA*TLADVR Trigger: CCGTACATCTGCAAGGGTTCAGGCTGCCCCAGTCCC...AAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR GCA 90 bp | ATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTCCGTGCTCGGAGCTTTGGTaGCAGTGGACAGCTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: IRKRSTVLLMEPTIHPLPCSELW*QWTACW Trigger: CCAGCAAGCTGTCCACTGGCACCAAAGCTCCGAGCA...CGGAAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR GCA 90 bp | ATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTCCGAGGAAGGACAGCTGGTaGACGTCCGTCACACTATTC | + |
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Preference number: 4 (lower is better) Translates to: IRKRSTVLLMEPTIHPLPRKDSW*TSVTLF Trigger: GAATAGTGTGACGGACGTGCACCAGCTGTCCTTCCT...CGGAAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR GCA 90 bp | ATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTCCGATCTGCTCCTGCTTCTaGATGGGGAGAGCATCCGTT | + |
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Preference number: 4 (lower is better) Translates to: IRKRSTVLLMEPTIHPLPICSCF*MGRASV Trigger: AACGGATGCTCTCCCCATGCAGAAGCAGGAGCAGAT...CGGAAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR TCA 90 bp | TTGCGTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCGCCATGAAGACTCTCTaGGAACTCCATCTGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LRNKEKVHCAAHGAHDSPAMKTL*ELHLLP Trigger: TGGCAGCAGATGGAGTTCTCAGAGAGTCTTCATGGC...GGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTACGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR GCA 90 bp | GTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTGCACCCCCAATTCCTTaGTTTGGGCACTTGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: VIRKRSTVLLMEPTIHPLAPPIP*FGHLRG Trigger: GCCTCTCAAGTGCCCAAAGCAAGGAATTGGGGGTGC...AAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR CCA 90 bp | GTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTGCTCCTGCTTCTGCATaGGGAGAGCATCCGTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: VIRKRSTVLLMEPTIHPLAPASA*GEHPFS Trigger: AGAAAACGGATGCTCTCCCCATGCAGAAGCAGGAGC...AAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR TCA 90 bp | AAAAGTTGCGTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTGCACTGGCTTCAGAATaGGCAGCAAGAGAGGGACTG | + |
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Preference number: 4 (lower is better) Translates to: KSCVIRKRSTVLLMEPTIALASE*AAREGL Trigger: CAGTCCCTCTCTTGCTGCTCATTCTGAAGCCAGTGC...AATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTACGCAACTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR GCA 90 bp | GTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTTTAGGGGGAAGTGCTTaGCACCATTTCCTTATGCCC | + |
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Preference number: 4 (lower is better) Translates to: VIRKRSTVLLMEPTIHPLLGGSA*HHFLMP Trigger: GGGCATAAGGAAATGGTGGCAAGCACTTCCCCCTAA...AAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR GCA 90 bp | TTGCGTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCATAGCAAGGAGCTTTTaGACTGGCTTCAGAATGAGC | + |
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Preference number: 4 (lower is better) Translates to: LRNKEKVHCAAHGAHDSPIARSF*TGFRMS Trigger: GCTCATTCTGAAGCCAGTGCAAAAGCTCCTTGCTAT...GGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTACGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR GCA 90 bp | TTGCGTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCCTTGTTAGGGGGAAGTaGTTGCCACCATTTCCTTAT | + |
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Preference number: 4 (lower is better) Translates to: LRNKEKVHCAAHGAHDSPLVRGK*LPPFPY Trigger: ATAAGGAAATGGTGGCAAGCACTTCCCCCTAACAAG...GGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTACGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR GCA 90 bp | TTGCGTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCAAAGAGCAGTCCAAATaGACTCAGACCAAGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LRNKEKVHCAAHGAHDSPKEQSK*TQTKKQ Trigger: CTGCTTCTTGGTCTGAGTGCATTTGGACTGCTCTTT...GGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTACGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR GCA 90 bp | ATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTCCGTCTGAGAACTCCATCTaGTGCCAAAACACTGAACTA | + |
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Preference number: 4 (lower is better) Translates to: IRKRSTVLLMEPTIHPLPSENSI*CQNTEL Trigger: TAGTTCAGTGTTTTGGCAGCAGATGGAGTTCTCAGA...CGGAAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR TCA 90 bp | AAAAGTTGCGTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCTGCTGCCAAAACACTaGACTAGCTCTTACATCGGC | + |
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Preference number: 4 (lower is better) Translates to: KSCVIRKRSTVLLMEPTILLPKH*TSSYIG Trigger: GCCGATGTAAGAGCTAGTTCAGTGTTTTGGCAGCAG...AATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTACGCAACTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR GCA 90 bp | GTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTGAGAACTCCATCTGCTaGCAAAACACTGAACTAGCT | + |
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Preference number: 4 (lower is better) Translates to: VIRKRSTVLLMEPTIHPLENSIC*QNTELA Trigger: AGCTAGTTCAGTGTTTTGGCAGCAGATGGAGTTCTC...AAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR TCA 90 bp | ATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTCCGTCACTTCCAGGTGAGTaGAATAAAACACTACAAAGA | + |
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Preference number: 4 (lower is better) Translates to: IRKRSTVLLMEPTIHPLPSLPGE*NKTLQR Trigger: TCTTTGTAGTGTTTTATTTCACTCACCTGGAAGTGA...CGGAAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR GCA 90 bp | GTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTGTCGGAAGTGTTCTTTaGCCACTAACAGTAGTTTAC | + |
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Preference number: 4 (lower is better) Translates to: VIRKRSTVLLMEPTIHPLVGSVL*PLTVVY Trigger: GTAAACTACTGTTAGTGGGCAAAGAACACTTCCGAC...AAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR GCA 90 bp | TTGCGTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCTCAAACATGTACTCCTaGAACTTTGACTGTATCCAC | + |
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Preference number: 4 (lower is better) Translates to: LRNKEKVHCAAHGAHDSPSNMYS*NFDCIH Trigger: GTGGATACAGTCAAAGTTGCAGGAGTACATGTTTGA...GGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTACGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR CCA 90 bp | AAAAGTTGCGTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCCCAATTCCTTGCTTTaGGCACTTGAGAGGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: KSCVIRKRSTVLLMEPTIPNSLL*ALERHL Trigger: AAGATGCCTCTCAAGTGCCCAAAGCAAGGAATTGGG...AATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTACGCAACTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR GCA 90 bp | GTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTAGAGCATCCGTTTTCTaGTTTTTGACAGTGATGTTT | + |
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Preference number: 4 (lower is better) Translates to: VIRKRSTVLLMEPTIHPLRASVF*FLTVMF Trigger: AAACATCACTGTCAAAAAGCAGAAAACGGATGCTCT...AAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS GCA 90 bp | ATGAACCAAGCTAGCCTTTTCTGCGGCGTGCCCCAGGACTGCGTGTaGGATCTCATGGCCCAGGAGGAAGGACAGCTGGTGCACGTCCGT | + |
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Preference number: 5 (lower is better) Translates to: MNQASLFCGVPQDCV*DLMAQEEGQLVHVR Trigger: ACGGACGTGCACCAGCTGTCCTTCCTCCTGGGCCATGAGATCGCACACGCAGTCCTGGGGCACGCCGCAGAAAAGGCTAGCTTGGTTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CCA 90 bp | CTAGCCTTTTCTGCGGCGTGCCCCAGGACTGCGTGTGCGATCTCATaGCCCAGGAGGAAGGACAGCTGGTGCACGTCCGTCACACTATTC | + |
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Preference number: 5 (lower is better) Translates to: LAFSAACPRTACAIS*PRRKDSWCTSVTLF Trigger: GAATAGTGTGACGGACGTGCACCAGCTGTCCTTCCTCCTGGGCCATGAGATCGCACACGCAGTCCTGGGGCACGCCGCAGAAAAGGCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CCA 90 bp | CCCAGGACTGCGTGTGCGATCTCATGGCCCAGGAGGAAGGACAGCTaGTGCACGTCCGTCACACTATTCAGAAGCCCGGTGAAAATAAAC | + |
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Preference number: 5 (lower is better) Translates to: PRTACAISWPRRKDS*CTSVTLFRSPVKIN Trigger: GTTTATTTTCACCGGGCTTCTGAATAGTGTGACGGACGTGCACCAGCTGTCCTTCCTCCTGGGCCATGAGATCGCACACGCAGTCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR CAA 90 bp | ATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTCCGTTACGGCAGGACAGCTaGGAGAACAGGAGGCCGCGA | + |
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Preference number: 5 (lower is better) Translates to: IRKRSTVLLMEPTIHPLPLRQDS*ENRRPR Trigger: TCGCGGCCTCCTGTTCTCCAAGCTGTCCTGCCGTAA...CGGAAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS GCA 90 bp | AGGACTGCGTGTGCGATCTCATGGCCCAGGAGGAAGGACAGCTGGTaGACGTCCGTCACACTATTCAGAAGCCCGGTGAAAATAAACACT | + |
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Preference number: 5 (lower is better) Translates to: RTACAISWPRRKDSW*TSVTLFRSPVKINT Trigger: AGTGTTTATTTTCACCGGGCTTCTGAATAGTGTGACGGACGTGCACCAGCTGTCCTTCCTCCTGGGCCATGAGATCGCACACGCAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CCA 90 bp | AGAGAGTGGCGGGCAATTGCAGACCTCCCGGAGTTTGAGAGCCTGTaGTATGAGTCTATCCAAGTACTCAGCTCGGTTCCCATGAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: REWRAIADLPEFESL*YESIQVLSSVPMRR Trigger: CCTTCTCATGGGAACCGAGCTGAGTACTTGGATAGACTCATACCACAGGCTCTCAAACTCCGGGAGGTCTGCAATTGCCCGCCACTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR CAA 90 bp | GTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTGGGAGCACAAAGGCATaGACGGCTGGGGAGTCAACC | + |
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Preference number: 5 (lower is better) Translates to: VIRKRSTVLLMEPTIHPLGSTKA*TAGEST Trigger: GGTTGACTCCCCAGCCGTCAATGCCTTTGTGCTCCC...AAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR CAA 90 bp | ATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTCCGGTTAGGGGGAAGTGCTaGCCACCATTTCCTTATGCC | + |
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Preference number: 5 (lower is better) Translates to: IRKRSTVLLMEPTIHPLPVRGKC*PPFPYA Trigger: GGCATAAGGAAATGGTGGCAAGCACTTCCCCCTAAC...CGGAAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CCA 90 bp | CTCGGTTCCCATGAGAAGGATGTGTCGACAGCCACTCTGGCAACTTaGGATAGCCATGAAGACTCTCTGAGAACTCCATCTGCTGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: LGSHEKDVSTATLAT*DSHEDSLRTPSAAK Trigger: TTTGGCAGCAGATGGAGTTCTCAGAGAGTCTTCATGGCTATCCCAAGTTGCCAGAGTGGCTGTCGACACATCCTTCTCATGGGAACCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR CAA 90 bp | GTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTTTACTGCTCGGAGCTTaGGTGCCAGTGGACAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: VIRKRSTVLLMEPTIHPLLLLGA*VPVDSL Trigger: CAAGCTGTCCACTGGCACCAAAGCTCCGAGCAGTAA...AAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR CAA 90 bp | TTGCGTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCCGCCAGCCACTTTCCTaGCTCCTTGTCTTAGAACAG | + |
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Preference number: 5 (lower is better) Translates to: LRNKEKVHCAAHGAHDSPRQPLS*LLVLEQ Trigger: CTGTTCTAAGACAAGGAGCAAGGAAAGTGGCTGGCG...GGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTACGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS GCA 90 bp | CTCACGCTGTCTTTAAATAGCTCCTTCTTGTTAGGGGGAAGTGCTTaGCACCATTTCCTTATGCCCCTGCCCACGATGATAGCAAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: LTLSLNSSFLLGGSA*HHFLMPLPTMIARS Trigger: GCTCCTTGCTATCATCGTGGGCAGGGGCATAAGGAAATGGTGGCAAGCACTTCCCCCTAACAAGAAGGAGCTATTTAAAGACAGCGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS GCA 90 bp | CATGAACCACCCAGTTGGTCTCCGAGATCCCCGGGACGTCTCGATTaGACTGTGTCAGATGATAAACCATTTCTTTCACAGTCAGGTAGC | + |
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Preference number: 5 (lower is better) Translates to: HEPPSWSPRSPGRLD*TVSDDKPFLSQSGS Trigger: GCTACCTGACTGTGAAAGAAATGGTTTATCATCTGACACAGTGCAATCGAGACGTCCCGGGGATCTCGGAGACCAACTGGGTGGTTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR CAA 90 bp | AAAAGTTGCGTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTAGCACCCCCAATTCCTaGCTTTGGGCACTTGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: KSCVIRKRSTVLLMEPTISTPNS*LWALER Trigger: CCTCTCAAGTGCCCAAAGCAAGGAATTGGGGGTGCT...AATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTACGCAACTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR CAA 90 bp | GTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTAGCTGTAGTCCAACTTaGTCAGCTTCGGCCTCCAAT | + |
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Preference number: 5 (lower is better) Translates to: VIRKRSTVLLMEPTIHPLSCSPT*SASASN Trigger: ATTGGAGGCCGAAGCTGACAAAGTTGGACTACAGCT...AAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CCA 90 bp | CGTCACACTATTCAGAAGCCCGGTGAAAATAAACACTTGTCCATTTaGGAGCACAAAGGCATTGACGGCTGGGGAGTCAACCACATGAAC | + |
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Preference number: 5 (lower is better) Translates to: RHTIQKPGENKHLSI*EHKGIDGWGVNHMN Trigger: GTTCATGTGGTTGACTCCCCAGCCGTCAATGCCTTTGTGCTCCCAAATGGACAAGTGTTTATTTTCACCGGGCTTCTGAATAGTGTGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CCA 90 bp | TATGGTCGATCAAACATGTACTCCTGCAACTTTGACTGTATCCACTaGCCCAAAACTGCCAAGCTGTCTCGGGGACAAATGGCCCAAATC | + |
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Preference number: 5 (lower is better) Translates to: YGRSNMYSCNFDCIH*PKTAKLSRGQMAQI Trigger: GATTTGGGCCATTTGTCCCCGAGACAGCTTGGCAGTTTTGGGCCAGTGGATACAGTCAAAGTTGCAGGAGTACATGTTTGATCGACCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR CAA 90 bp | TTGCGTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCCCTTGCTTTGGGCACTaGAGAGGCATCTTGATTTTT | + |
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Preference number: 5 (lower is better) Translates to: LRNKEKVHCAAHGAHDSPPCFGH*RGILIF Trigger: AAAAATCAAGATGCCTCTCAAGTGCCCAAAGCAAGG...GGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTACGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS TCA 90 bp | CAATGTTCTACTGTATGGTCGATCAAACATGTACTCCTGCAACTTTaGCTGTATCCACTGGCCCAAAACTGCCAAGCTGTCTCGGGGACA | + |
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Preference number: 5 (lower is better) Translates to: QCSTVWSIKHVLLQL*LYPLAQNCQAVSGT Trigger: TGTCCCCGAGACAGCTTGGCAGTTTTGGGCCAGTGGATACAGTCAAAGTTGCAGGAGTACATGTTTGATCGACCATACAGTAGAACATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR CAA 90 bp | ATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTCCGGGTGAAAATAAACACTaGTCCATTTGGGAGCACAAA | + |
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Preference number: 5 (lower is better) Translates to: IRKRSTVLLMEPTIHPLPGENKH*SIWEHK Trigger: TTTGTGCTCCCAAATGGACAAGTGTTTATTTTCACC...CGGAAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR CAA 90 bp | AAAAGTTGCGTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTTGTACTCCTGCAACTTaGACTGTATCCACTGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: KSCVIRKRSTVLLMEPTICTPAT*TVSTGP Trigger: TGGGCCAGTGGATACAGTCAAAGTTGCAGGAGTACA...AATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTACGCAACTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS-3UTR CAA 90 bp | GTAATAAGGAAAAGGTCCACTGTGCTGCTCATGGAGCCCACGATTCACCCACTTTCCGTTTTCTGCTTTTaGACAGTGATGTTTAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: VIRKRSTVLLMEPTIHPLSVFCF*TVMFRS Trigger: GGACCTAAACATCACTGTCAAAAAGCAGAAAACGGA...AAGTGGGTGAATCGTGGGCTCCATGAGCAGCACAGTGGACCTTTTCCTTATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS GCA 72 bp | AACCAAGCTAGCCTTTTCTGCGGCGTGCCCCAGGACTaGGTGTGCGATCTCATGGCCCAGGAGGAAGGACAG | + |
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Preference number: 6 (lower is better) Translates to: NQASLFCGVPQD*VCDLMAQEEGQ Trigger: CTGTCCTTCCTCCTGGGCCATGAGATCGCACACGCAGTCCTGGGGCACGCCGCAGAAAAGGCTAGCTTGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CCA 72 bp | GCGTGTGCGATCTCATGGCCCAGGAGGAAGGACAGCTaGTGCACGTCCGTCACACTATTCAGAAGCCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: ACAISWPRRKDS*CTSVTLFRSPV Trigger: CACCGGGCTTCTGAATAGTGTGACGGACGTGCACCAGCTGTCCTTCCTCCTGGGCCATGAGATCGCACACGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CAA 72 bp | TACGGAAACTCCGGGCCTCTATTACGGCAGGACAGCTaGGAGAACAGGAGGCCGCGAGAGCAGGAACGCCAG | + |
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Preference number: 6 (lower is better) Translates to: YGNSGPLLRQDS*ENRRPREQERQ Trigger: CTGGCGTTCCTGCTCTCGCGGCCTCCTGTTCTCCAAGCTGTCCTGCCGTAATAGAGGCCCGGAGTTTCCGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS GCA 72 bp | GAGCAGCAAGAGAGGGACTGGGGCAGCCTGAACCCTTaGAGATGTACGGAAACTCCGGGCCTCTATTACGGC | + |
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Preference number: 6 (lower is better) Translates to: EQQERDWGSLNP*RCTETPGLYYG Trigger: GCCGTAATAGAGGCCCGGAGTTTCCGTACATCTGCAAGGGTTCAGGCTGCCCCAGTCCCTCTCTTGCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CAA 72 bp | AATAGCCGAGGGTCTGGGCCAGAGAGTGGCGGGCAATaGCAGACCTCCCGGAGTTTGAGAGCCTGTGGTATG | + |
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Preference number: 6 (lower is better) Translates to: NSRGSGPESGGQ*QTSRSLRACGM Trigger: CATACCACAGGCTCTCAAACTCCGGGAGGTCTGCAATTGCCCGCCACTCTCTGGCCCAGACCCTCGGCTATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CAA 90 bp | GGGTCTGGGCCAGAGAGTGGCGGGCAATTGCAGACCTCCCGGAGTTaGAGAGCCTGTGGTATGAGTCTATCCAAGTACTCAGCTCGGTTC | + |
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Preference number: 6 (lower is better) Translates to: GSGPESGGQLQTSRS*RACGMSLSKYSARF Trigger: GAACCGAGCTGAGTACTTGGATAGACTCATACCACAGGCTCTCAAACTCCGGGAGGTCTGCAATTGCCCGCCACTCTCTGGCCCAGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CAA 90 bp | AGCCTGAACAATAGCCGAGGGTCTGGGCCAGAGAGTGGCGGGCAATaGCAGACCTCCCGGAGTTTGAGAGCCTGTGGTATGAGTCTATCC | + |
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Preference number: 6 (lower is better) Translates to: SLNNSRGSGPESGGQ*QTSRSLRACGMSLS Trigger: GGATAGACTCATACCACAGGCTCTCAAACTCCGGGAGGTCTGCAATTGCCCGCCACTCTCTGGCCCAGACCCTCGGCTATTGTTCAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CAA 72 bp | AGGAGGCCGCGAGAGCAGGAACGCCAGCCACTTTCCTaGCTCCTTGTCTTAGAACAGAATCACCCCGCACAG | + |
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Preference number: 6 (lower is better) Translates to: RRPREQERQPLS*LLVLEQNHPAQ Trigger: CTGTGCGGGGTGATTCTGTTCTAAGACAAGGAGCAAGGAAAGTGGCTGGCGTTCCTGCTCTCGCGGCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS TCA 72 bp | TTCAGAATGAGCAGCAAGAGAGGGACTGGGGCAGCCTaGACCCTTGCAGATGTACGGAAACTCCGGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: FRMSSKRGTGAA*TLADVRKLRAS Trigger: AGAGGCCCGGAGTTTCCGTACATCTGCAAGGGTTCAGGCTGCCCCAGTCCCTCTCTTGCTGCTCATTCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CAA 90 bp | CCACCATTTCCTTATGCCCCTGCCCACGATGATAGCAAGGAGCTTTaGCACTGGCTTCAGAATGAGCAGCAAGAGAGGGACTGGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PPFPYAPAHDDSKEL*HWLQNEQQERDWGS Trigger: GCTGCCCCAGTCCCTCTCTTGCTGCTCATTCTGAAGCCAGTGCAAAAGCTCCTTGCTATCATCGTGGGCAGGGGCATAAGGAAATGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CCA 72 bp | CGGGCAATTGCAGACCTCCCGGAGTTTGAGAGCCTGTaGTATGAGTCTATCCAAGTACTCAGCTCGGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: RAIADLPEFESL*YESIQVLSSVP Trigger: GGGAACCGAGCTGAGTACTTGGATAGACTCATACCACAGGCTCTCAAACTCCGGGAGGTCTGCAATTGCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CCA 72 bp | TTGCACTGGCTTCAGAATGAGCAGCAAGAGAGGGACTaGGGCAGCCTGAACCCTTGCAGATGTACGGAAACT | + |
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Preference number: 6 (lower is better) Translates to: LHWLQNEQQERD*GSLNPCRCTET Trigger: AGTTTCCGTACATCTGCAAGGGTTCAGGCTGCCCCAGTCCCTCTCTTGCTGCTCATTCTGAAGCCAGTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CCA 72 bp | CACTTGTCCATTTGGGAGCACAAAGGCATTGACGGCTaGGGAGTCAACCACATGAACCACCCAGTTGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: HLSIWEHKGIDG*GVNHMNHPVGL Trigger: GAGACCAACTGGGTGGTTCATGTGGTTGACTCCCCAGCCGTCAATGCCTTTGTGCTCCCAAATGGACAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CAA 72 bp | CCAGAGAGTGGCGGGCAATTGCAGACCTCCCGGAGTTaGAGAGCCTGTGGTATGAGTCTATCCAAGTACTCA | + |
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Preference number: 6 (lower is better) Translates to: PESGGQLQTSRS*RACGMSLSKYS Trigger: TGAGTACTTGGATAGACTCATACCACAGGCTCTCAAACTCCGGGAGGTCTGCAATTGCCCGCCACTCTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS GCA 72 bp | CTTATGCCCCTGCCCACGATGATAGCAAGGAGCTTTTaGACTGGCTTCAGAATGAGCAGCAAGAGAGGGACT | + |
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Preference number: 6 (lower is better) Translates to: LMPLPTMIARSF*TGFRMSSKRGT Trigger: AGTCCCTCTCTTGCTGCTCATTCTGAAGCCAGTGCAAAAGCTCCTTGCTATCATCGTGGGCAGGGGCATAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CAA 90 bp | AGCCGCCACTTGTTCTTCCTCACGCTGTCTTTAAATAGCTCCTTCTaGTTAGGGGGAAGTGCTTGCCACCATTTCCTTATGCCCCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: SRHLFFLTLSLNSSF*LGGSACHHFLMPLP Trigger: GGGCAGGGGCATAAGGAAATGGTGGCAAGCACTTCCCCCTAACAAGAAGGAGCTATTTAAAGACAGCGTGAGGAAGAACAAGTGGCGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CAA 90 bp | GTGCACGTCCGTCACACTATTCAGAAGCCCGGTGAAAATAAACACTaGTCCATTTGGGAGCACAAAGGCATTGACGGCTGGGGAGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: VHVRHTIQKPGENKH*SIWEHKGIDGWGVN Trigger: GTTGACTCCCCAGCCGTCAATGCCTTTGTGCTCCCAAATGGACAAGTGTTTATTTTCACCGGGCTTCTGAATAGTGTGACGGACGTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS TCA 72 bp | GGTATGAGTCTATCCAAGTACTCAGCTCGGTTCCCATaGGAAGGATGTGTCGACAGCCACTCTGGCAACTTG | + |
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Preference number: 6 (lower is better) Translates to: GMSLSKYSARFP*EGCVDSHSGNL Trigger: CAAGTTGCCAGAGTGGCTGTCGACACATCCTTCTCATGGGAACCGAGCTGAGTACTTGGATAGACTCATACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS GCA 72 bp | CCCAGTTGGTCTCCGAGATCCCCGGGACGTCTCGATTaGACTGTGTCAGATGATAAACCATTTCTTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: PSWSPRSPGRLD*TVSDDKPFLSQ Trigger: CTGTGAAAGAAATGGTTTATCATCTGACACAGTGCAATCGAGACGTCCCGGGGATCTCGGAGACCAACTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CAA 72 bp | TCGGCACATGCCTTTGCAGCCAGCTGTAGTCCAACTTaGTCAGCTTCGGCCTCCAATGTTCTACTGTATGGT | + |
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Preference number: 6 (lower is better) Translates to: SAHAFAASCSPT*SASASNVLLYG Trigger: ACCATACAGTAGAACATTGGAGGCCGAAGCTGACAAAGTTGGACTACAGCTGGCTGCAAAGGCATGTGCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CAA 90 bp | GCTCTTACATCGGCACATGCCTTTGCAGCCAGCTGTAGTCCAACTTaGTCAGCTTCGGCCTCCAATGTTCTACTGTATGGTCGATCAAAC | + |
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Preference number: 6 (lower is better) Translates to: ALTSAHAFAASCSPT*SASASNVLLYGRSN Trigger: GTTTGATCGACCATACAGTAGAACATTGGAGGCCGAAGCTGACAAAGTTGGACTACAGCTGGCTGCAAAGGCATGTGCCGATGTAAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CAA 90 bp | CCAATGTTCTACTGTATGGTCGATCAAACATGTACTCCTGCAACTTaGACTGTATCCACTGGCCCAAAACTGCCAAGCTGTCTCGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: PMFYCMVDQTCTPAT*TVSTGPKLPSCLGD Trigger: GTCCCCGAGACAGCTTGGCAGTTTTGGGCCAGTGGATACAGTCAAAGTTGCAGGAGTACATGTTTGATCGACCATACAGTAGAACATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CCA 72 bp | ATTCAGAAGCCCGGTGAAAATAAACACTTGTCCATTTaGGAGCACAAAGGCATTGACGGCTGGGGAGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: IQKPGENKHLSI*EHKGIDGWGVN Trigger: GTTGACTCCCCAGCCGTCAATGCCTTTGTGCTCCCAAATGGACAAGTGTTTATTTTCACCGGGCTTCTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CCA 72 bp | TCAAACATGTACTCCTGCAACTTTGACTGTATCCACTaGCCCAAAACTGCCAAGCTGTCTCGGGGACAAATG | + |
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Preference number: 6 (lower is better) Translates to: SNMYSCNFDCIH*PKTAKLSRGQM Trigger: CATTTGTCCCCGAGACAGCTTGGCAGTTTTGGGCCAGTGGATACAGTCAAAGTTGCAGGAGTACATGTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CAA 72 bp | AGTCCAAATGCACTCAGACCAAGAAGCAGCCGCCACTaGTTCTTCCTCACGCTGTCTTTAAATAGCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SPNALRPRSSRH*FFLTLSLNSSF Trigger: GAAGGAGCTATTTAAAGACAGCGTGAGGAAGAACAAGTGGCGGCTGCTTCTTGGTCTGAGTGCATTTGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CAA 72 bp | CGTCACACTATTCAGAAGCCCGGTGAAAATAAACACTaGTCCATTTGGGAGCACAAAGGCATTGACGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RHTIQKPGENKH*SIWEHKGIDGW Trigger: CCAGCCGTCAATGCCTTTGTGCTCCCAAATGGACAAGTGTTTATTTTCACCGGGCTTCTGAATAGTGTGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CAA 90 bp | ACAAAGAGCAGTCCAAATGCACTCAGACCAAGAAGCAGCCGCCACTaGTTCTTCCTCACGCTGTCTTTAAATAGCTCCTTCTTGTTAGGG | + |
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Preference number: 6 (lower is better) Translates to: TKSSPNALRPRSSRH*FFLTLSLNSSFLLG Trigger: CCCTAACAAGAAGGAGCTATTTAAAGACAGCGTGAGGAAGAACAAGTGGCGGCTGCTTCTTGGTCTGAGTGCATTTGGACTGCTCTTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CAA 90 bp | ATCCATACTTCATATTCCAGGTCTGACAGAAGTCGGAAGTGTTCTTaGCCCACTAACAGTAGTTTACTCCTTCCGGTGACAGGGCTCACT | + |
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Preference number: 6 (lower is better) Translates to: IHTSYSRSDRSRKCS*PTNSSLLLPVTGLT Trigger: AGTGAGCCCTGTCACCGGAAGGAGTAAACTACTGTTAGTGGGCAAAGAACACTTCCGACTTCTGTCAGACCTGGAATATGAAGTATGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS TCA 72 bp | ACTGTATGGTCGATCAAACATGTACTCCTGCAACTTTaGCTGTATCCACTGGCCCAAAACTGCCAAGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: TVWSIKHVLLQL*LYPLAQNCQAV Trigger: GACAGCTTGGCAGTTTTGGGCCAGTGGATACAGTCAAAGTTGCAGGAGTACATGTTTGATCGACCATACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS GCA 72 bp | TCTTTAAATAGCTCCTTCTTGTTAGGGGGAAGTGCTTaGCACCATTTCCTTATGCCCCTGCCCACGATGATA | + |
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Preference number: 6 (lower is better) Translates to: SLNSSFLLGGSA*HHFLMPLPTMI Trigger: TATCATCGTGGGCAGGGGCATAAGGAAATGGTGGCAAGCACTTCCCCCTAACAAGAAGGAGCTATTTAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CAA 72 bp | TCATATTCCAGGTCTGACAGAAGTCGGAAGTGTTCTTaGCCCACTAACAGTAGTTTACTCCTTCCGGTGACA | + |
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Preference number: 6 (lower is better) Translates to: SYSRSDRSRKCS*PTNSSLLLPVT Trigger: TGTCACCGGAAGGAGTAAACTACTGTTAGTGGGCAAAGAACACTTCCGACTTCTGTCAGACCTGGAATATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CAA 72 bp | TACTGTATGGTCGATCAAACATGTACTCCTGCAACTTaGACTGTATCCACTGGCCCAAAACTGCCAAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: YCMVDQTCTPAT*TVSTGPKLPSC Trigger: ACAGCTTGGCAGTTTTGGGCCAGTGGATACAGTCAAAGTTGCAGGAGTACATGTTTGATCGACCATACAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS GCA 72 bp | AATGTTCTACTGTATGGTCGATCAAACATGTACTCCTaGAACTTTGACTGTATCCACTGGCCCAAAACTGCC | + |
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Preference number: 6 (lower is better) Translates to: NVLLYGRSNMYS*NFDCIHWPKTA Trigger: GGCAGTTTTGGGCCAGTGGATACAGTCAAAGTTGCAGGAGTACATGTTTGATCGACCATACAGTAGAACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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| CDS CAA 72 bp | TTGTTCTTCCTCACGCTGTCTTTAAATAGCTCCTTCTaGTTAGGGGGAAGTGCTTGCCACCATTTCCTTATG | + |
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Preference number: 6 (lower is better) Translates to: LFFLTLSLNSSF*LGGSACHHFLM Trigger: CATAAGGAAATGGTGGCAAGCACTTCCCCCTAACAAGAAGGAGCTATTTAAAGACAGCGTGAGGAAGAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035780.4 |
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