Pregenerated sensors for OLR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030162Ensembl transcript IDs: ENSMUST00000032265.13, ENSMUST00000162815.2, ENSMUST00000182784.4, ENSMUST00000183258.8, ENSMUST00000203564.2
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTATTTCTCGGACGAGCTTTGCCTTTGAGCCCTCTGCCTGCACTTaGGGAGGATTTCTACATCCTGTCTTTCATGCGGCAACAGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: VISRTSFAFEPSACT*GGFLHPVFHAATGG Trigger: GCCTCCTGTTGCCGCATGAAAGACAGGATGTAGAAATCCTCCTCAAGTGCAGGCAGAGGGCTCAAAGGCAAAGCTCGTCCGAGAAATAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR GCA 90 bp | GCCCTCTGCCTGCACTTGAGGAGGATTTCTACATCCTGTCTTTCATaGGGCAACAGGAGGCATACTGAGGTAGAGGAGACTGAGTACAAA | + |
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Preference number: 1 (lower is better) Translates to: ALCLHLRRISTSCLS*GNRRHTEVEETEYK Trigger: TTTGTACTCAGTCTCCTCTACCTCAGTATGCCTCCTGTTGCCGCATGAAAGACAGGATGTAGAAATCCTCCTCAAGTGCAGGCAGAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR TCA 90 bp | TTTCACAAGAGAAGACAAACCTATTCTTACTGTAACTTGAGATGCTaGGGCTGGTTGGCATCCATGGGAGGCCTCCCCTCTTCTGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: FHKRRQTYSYCNLRC*GWLASMGGLPSSGE Trigger: CTCTCCAGAAGAGGGGAGGCCTCCCATGGATGCCAACCAGCCTCAGCATCTCAAGTTACAGTAAGAATAGGTTTGTCTTCTCTTGTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR TCA 90 bp | CAGTTCTGTTTCTTTGCATGTTATTTCTCGGACGAGCTTTGCCTTTaGGCCCTCTGCCTGCACTTGAGGAGGATTTCTACATCCTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: QFCFFACYFSDELCL*ALCLHLRRISTSCL Trigger: AAGACAGGATGTAGAAATCCTCCTCAAGTGCAGGCAGAGGGCTCAAAGGCAAAGCTCGTCCGAGAAATAACATGCAAAGAAACAGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR CCA 90 bp | ACATCTTATGCTATTCCATTCACATTAAGGTGTTTGAGTCACACATaGCAGGGCACTCCTTCAGTCTTAAGGTTTGGGAGTCTGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: TSYAIPFTLRCLSHT*QGTPSVLRFGSLAG Trigger: TCCTGCCAGACTCCCAAACCTTAAGACTGAAGGAGTGCCCTGCCATGTGTGACTCAAACACCTTAATGTGAATGGAATAGCATAAGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR TCA 90 bp | ATTAAGATTTTCACAAGAGAAGACAAACCTATTCTTACTGTAACTTaGGATGCTGAGGCTGGTTGGCATCCATGGGAGGCCTCCCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: IKIFTREDKPILTVT*DAEAGWHPWEASPL Trigger: AAGAGGGGAGGCCTCCCATGGATGCCAACCAGCCTCAGCATCTCAAGTTACAGTAAGAATAGGTTTGTCTTCTCTTGTGAAAATCTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR CCA 90 bp | ATAACTGATACAAGAATTGATCACAGGAGCTTGAGAGATAGCTCATaGCAAAGAGTACTGGCTGTTCTTCCAGGGGACACGAATTCAATT | + |
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Preference number: 1 (lower is better) Translates to: ITDTRIDHRSLRDSS*QRVLAVLPGDTNSI Trigger: AATTGAATTCGTGTCCCCTGGAAGAACAGCCAGTACTCTTTGCCATGAGCTATCTCTCAAGCTCCTGTGATCAATTCTTGTATCAGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR TCA 90 bp | AAAACCGTCTGTAATTCCAGTCCCAGAAAATACAATGGCCTCTTCTaGCTTTCTCTGGTACCATTCATGTACATGGTACCAATACATATG | + |
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Preference number: 1 (lower is better) Translates to: KTVCNSSPRKYNGLF*LSLVPFMYMVPIHM Trigger: CATATGTATTGGTACCATGTACATGAATGGTACCAGAGAAAGTCAGAAGAGGCCATTGTATTTTCTGGGACTGGAATTACAGACGGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR TCA 90 bp | GGGGCAGAAGTGACAGGTATGTTCATCATCTTAGCTGTGGTAATATaGCCACTACAGGTAATCATCGAATTTATTTTTAAATTTGGATTA | + |
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Preference number: 1 (lower is better) Translates to: GAEVTGMFIILAVVI*PLQVIIEFIFKFGL Trigger: TAATCCAAATTTAAAAATAAATTCGATGATTACCTGTAGTGGTCATATTACCACAGCTAAGATGATGAACATACCTGTCACTTCTGCCCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR CCA 90 bp | GCTCAGGGGTTAAGAGCACTGCTTGCCTTTCCAGAGGACCTGGGTTCAGTTCCCAGGAGCTCTAGAAGGTaGAGGCCAGCCTGCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: AQGLRALLAFPEDLGSVPRSSRR*RPACSV Trigger: CACAGAGCAGGCTGGCCTCCACCTTCTAGAGCTCCT...GGGAACTGAACCCAGGTCCTCTGGAAAGGCAAGCAGTGCTCTTAACCCCTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR CCA 90 bp | GCTCAGGGGTTAAGAGCACTGCTTGCCTTTCCAGAGGACCTGGGTTCAGTTCCCACTGAGTACAAAGCATaGCCAGGTCAGGCAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: AQGLRALLAFPEDLGSVPTEYKA*PGQAGS Trigger: GCTTCCTGCCTGACCTGGCCATGCTTTGTACTCAGT...GGGAACTGAACCCAGGTCCTCTGGAAAGGCAAGCAGTGCTCTTAACCCCTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR TCA 90 bp | GCTCAGGGGTTAAGAGCACTGCTTGCCTTTCCAGAGGACCTGGGTTCAGTTCCCTGTAACTTGAGATGCTaGGGCTGGTTGGCATCCATG | + |
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Preference number: 2 (lower is better) Translates to: AQGLRALLAFPEDLGSVPCNLRC*GWLASM Trigger: CATGGATGCCAACCAGCCTCAGCATCTCAAGTTACA...GGGAACTGAACCCAGGTCCTCTGGAAAGGCAAGCAGTGCTCTTAACCCCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR CCA 90 bp | GCTCAGGGGTTAAGAGCACTGCTTGCCTTTCCAGAGGACCTGGGTTCAGTTCCCTTCAGTCTTAAGGTTTaGGAGTCTGGCAGGAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: AQGLRALLAFPEDLGSVPFSLKV*ESGRRS Trigger: GCTCCTCCTGCCAGACTCCCAAACCTTAAGACTGAA...GGGAACTGAACCCAGGTCCTCTGGAAAGGCAAGCAGTGCTCTTAACCCCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR TCA 90 bp | AGCTTACAACCATCTGCAATTCCAGATCCAGAGAATCTGATGTCCTCTTCTGATGACGAGCTTTGCCTTTaGGCCCTCTGCCTGCACTTG | + |
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Preference number: 2 (lower is better) Translates to: SLQPSAIPDPENLMSSSDDELCL*ALCLHL Trigger: CAAGTGCAGGCAGAGGGCTCAAAGGCAAAGCTCGTC...ATCAGAAGAGGACATCAGATTCTCTGGATCTGGAATTGCAGATGGTTGTAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR TCA 90 bp | GCTCAGGGGTTAAGAGCACTGCTTGCCTTTCCAGAGGACCTGGGTTCAGTTCCCAAAAGAATGATGAACTaGTACAAACACTGTGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: AQGLRALLAFPEDLGSVPKRMMN*YKHCGG Trigger: TCCACCACAGTGTTTGTATCAGTTCATCATTCTTTT...GGGAACTGAACCCAGGTCCTCTGGAAAGGCAAGCAGTGCTCTTAACCCCTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR CAA 90 bp | CCAGTTCTGTTTCTTTGCATGTTATTTCTCGGACGAGCTTTGCCTTaGAGCCCTCTGCCTGCACTTGAGGAGGATTTCTACATCCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: PVLFLCMLFLGRALP*SPLPALEEDFYILS Trigger: AGACAGGATGTAGAAATCCTCCTCAAGTGCAGGCAGAGGGCTCAAAGGCAAAGCTCGTCCGAGAAATAACATGCAAAGAAACAGAACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR CCA 90 bp | GCTCAGGGGTTAAGAGCACTGCTTGCCTTTCCAGAGGACCTGGGTTCAGTTCCCAAGATTTCAAACATCTaGATCCACCAGTATTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: AQGLRALLAFPEDLGSVPKISNI*IHQYLL Trigger: AAGCAAATACTGGTGGATCCAGATGTTTGAAATCTT...GGGAACTGAACCCAGGTCCTCTGGAAAGGCAAGCAGTGCTCTTAACCCCTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR TCA 90 bp | CTGTCTCATCTTCTCAAGGATGTATCTAGCATAGAAACACACACACACACACACCCCTCTGCCTGCACTTaGGGAGGATTTCTACATCCT | + |
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Preference number: 2 (lower is better) Translates to: LSHLLKDVSSIETHTHTHPSACT*GGFLHP Trigger: AGGATGTAGAAATCCTCCTCAAGTGCAGGCAGAGGG...GTGTGTGTGTGTGTGTGTTTCTATGCTAGATACATCCTTGAGAAGATGAGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR TCA 90 bp | AAACCGTCTGTAATTCCAGTCCCAGAAAATACAATGGCCTCTTCTGACTTTCTCTCTGATGTCCTCTTCTaGTCTTCAGTGGCACCAGGC | + |
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Preference number: 2 (lower is better) Translates to: KPSVIPVPENTMASSDFLSDVLF*SSVAPG Trigger: GCCTGGTGCCACTGAAGATCAGAAGAGGACATCAGA...GAGAAAGTCAGAAGAGGCCATTGTATTTTCTGGGACTGGAATTACAGACGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTCATCTTCTCAAGGATGTATCTAGCATAGAAACACACACACACACACACTTGGTTGGGAGACTTTaGAGGGGCAAGGCCAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: LSHLLKDVSSIETHTHTHLVGRL*RGKASV Trigger: TACACTGGCCTTGCCCCTCCAAAGTCTCCCAACCAA...GTGTGTGTGTGTGTGTGTTTCTATGCTAGATACATCCTTGAGAAGATGAGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR CCA 90 bp | GTATCTAGCATAGAAACACACACACACACACACACACACACACACACACACTCTTCTTCTGATCTTCAGTaGCACCAGGCACTCATGTGG | + |
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Preference number: 2 (lower is better) Translates to: VSSIETHTHTHTHTHTHSSSDLQ*HQALMW Trigger: CCACATGAGTGCCTGGTGCCACTGAAGATCAGAAGA...AGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTATGCTAGATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR CAA 90 bp | GTTTTTCCAGTTCTGTTTCTTTGCATGTTATTTCTCGGACGAGCTTaGCCTTTGAGCCCTCTGCCTGCACTTGAGGAGGATTTCTACATC | + |
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Preference number: 2 (lower is better) Translates to: VFPVLFLCMLFLGRA*PLSPLPALEEDFYI Trigger: GATGTAGAAATCCTCCTCAAGTGCAGGCAGAGGGCTCAAAGGCAAAGCTCGTCCGAGAAATAACATGCAAAGAAACAGAACTGGAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTCATCTTCTCAAGGATGTATCTAGCATAGAAACACACACACACACACACAGAAGGATTGCAGGTTaGTTGGGAGACTTTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LSHLLKDVSSIETHTHTHRRIAG*LGDFGG Trigger: CCCTCCAAAGTCTCCCAACCAACCTGCAATCCTTCT...GTGTGTGTGTGTGTGTGTTTCTATGCTAGATACATCCTTGAGAAGATGAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR TCA 90 bp | AAACCGTCTGTAATTCCAGTCCCAGAAAATACAATGGCCTCTTCTGACTTTCTCGGAAAGGGGCAGAAGTaGCAGGTATGTTCATCATCT | + |
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Preference number: 2 (lower is better) Translates to: KPSVIPVPENTMASSDFLGKGQK*QVCSSS Trigger: AGATGATGAACATACCTGTCACTTCTGCCCCTTTCC...GAGAAAGTCAGAAGAGGCCATTGTATTTTCTGGGACTGGAATTACAGACGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR GCA 90 bp | AAACCGTCTGTAATTCCAGTCCCAGAAAATACAATGGCCTCTTCTGACTTTCTCAAGGGGAAGAAGGATTaGAGGTTGGTTGGGAGACTT | + |
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Preference number: 2 (lower is better) Translates to: KPSVIPVPENTMASSDFLKGKKD*RLVGRL Trigger: AAGTCTCCCAACCAACCTGCAATCCTTCTTCCCCTT...GAGAAAGTCAGAAGAGGCCATTGTATTTTCTGGGACTGGAATTACAGACGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTCATCTTCTCAAGGATGTATCTAGCATAGAAACACACACACACACACACACATCCTGTCTTTCATaGGGCAACAGGAGGCATACT | + |
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Preference number: 2 (lower is better) Translates to: LSHLLKDVSSIETHTHTHTSCLS*GNRRHT Trigger: AGTATGCCTCCTGTTGCCGCATGAAAGACAGGATGT...GTGTGTGTGTGTGTGTGTTTCTATGCTAGATACATCCTTGAGAAGATGAGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR CCA 90 bp | GTATCTAGCATAGAAACACACACACACACACACACACACACACACACACACTCTAGTGCAGTCTGGAGATaGACTCCTGTCATAAAGATC | + |
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Preference number: 2 (lower is better) Translates to: VSSIETHTHTHTHTHTHSSAVWR*TPVIKI Trigger: GATCTTTATGACAGGAGTCCATCTCCAGACTGCACT...AGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTATGCTAGATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR CAA 90 bp | AGCAAAAATGGAGACATAACTGATACAAGAATTGATCACAGGAGCTaGAGAGATAGCTCATGGCAAAGAGTACTGGCTGTTCTTCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: SKNGDITDTRIDHRS*RDSSWQRVLAVLPG Trigger: CCCTGGAAGAACAGCCAGTACTCTTTGCCATGAGCTATCTCTCAAGCTCCTGTGATCAATTCTTGTATCAGTTATGTCTCCATTTTTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR TCA 90 bp | CTGTCTCATCTTCTCAAGGATGTATCTAGCATAGAAACACACACACACACACACCAGATCCAGAGAATCTaGTGTCCTCTTCTGATCTTC | + |
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Preference number: 2 (lower is better) Translates to: LSHLLKDVSSIETHTHTHQIQRI*CPLLIF Trigger: GAAGATCAGAAGAGGACATCAGATTCTCTGGATCTG...GTGTGTGTGTGTGTGTGTTTCTATGCTAGATACATCCTTGAGAAGATGAGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR TCA 90 bp | AAACCGTCTGTAATTCCAGTCCCAGAAAATACAATGGCCTCTTCTGACTTTCTCTTGATCACAGGAGCTTaGGAGATAGCTCATGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: KPSVIPVPENTMASSDFLLITGA*EIAHGK Trigger: TTTGCCATGAGCTATCTCTCAAGCTCCTGTGATCAA...GAGAAAGTCAGAAGAGGCCATTGTATTTTCTGGGACTGGAATTACAGACGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTCATCTTCTCAAGGATGTATCTAGCATAGAAACACACACACACACACACGGATCCACCAGTATTTaGTTCTGGTCCTTGTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: LSHLLKDVSSIETHTHTHGSTSI*FWSLSL Trigger: CAAAGACAAGGACCAGAAGCAAATACTGGTGGATCC...GTGTGTGTGTGTGTGTGTTTCTATGCTAGATACATCCTTGAGAAGATGAGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR GCA 90 bp | GTATCTAGCATAGAAACACACACACACACACACACACACACACACACACACTCTCCAGTTCTGTTTCTTTaGATGTTATTTCTCGGACGA | + |
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Preference number: 2 (lower is better) Translates to: VSSIETHTHTHTHTHTHSPVLFL*MLFLGR Trigger: TCGTCCGAGAAATAACATGCAAAGAAACAGAACTGG...AGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTATGCTAGATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR CCA 90 bp | AGCTTACAACCATCTGCAATTCCAGATCCAGAGAATCTGATGTCCTCTTCTGATACCAGTATTTGCTTCTaGTCCTTGTCTTTGTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: SLQPSAIPDPENLMSSSDTSICF*SLSLLR Trigger: CCTCAACAAAGACAAGGACCAGAAGCAAATACTGGT...ATCAGAAGAGGACATCAGATTCTCTGGATCTGGAATTGCAGATGGTTGTAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR CCA 90 bp | AAACCGTCTGTAATTCCAGTCCCAGAAAATACAATGGCCTCTTCTGACTTTCTCCTGATACAAACACTGTaGTGGAGATGTATGAACACA | + |
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Preference number: 2 (lower is better) Translates to: KPSVIPVPENTMASSDFLLIQTL*WRCMNT Trigger: TGTGTTCATACATCTCCACCACAGTGTTTGTATCAG...GAGAAAGTCAGAAGAGGCCATTGTATTTTCTGGGACTGGAATTACAGACGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR TCA 90 bp | AATGACACTATAGATCCACAGGGGAAGGCTCAACATTTGAAAAGAATGATGAACTGGAAGAAGCTGGACTaGAAAAACCTGGACATCTTA | + |
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Preference number: 2 (lower is better) Translates to: NDTIDPQGKAQHLKRMMNWKKLD*KNLDIL Trigger: TAAGATGTCCAGGTTTTTTCAGTCCAGCTTCTTCCA...GTTCATCATTCTTTTCAAATGTTGAGCCTTCCCCTGTGGATCTATAGTGTCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR CCA 90 bp | GTATCTAGCATAGAAACACACACACACACACACACACACACACACACACACTCTATAAAGATCAAGCCATaGCTTTTTAGAGATCATGAG | + |
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Preference number: 2 (lower is better) Translates to: VSSIETHTHTHTHTHTHSIKIKP*LFRDHE Trigger: CTCATGATCTCTAAAAAGCCATGGCTTGATCTTTAT...AGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTATGCTAGATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR CCA 90 bp | AATGACACTATAGATCCACAGGGGAAGGCTCAACATTTGAAAAGAATGATGAACTGTAAAAGTGCAGTCTaGAGATGGACTCCTGTCATA | + |
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Preference number: 2 (lower is better) Translates to: NDTIDPQGKAQHLKRMMNCKSAV*RWTPVI Trigger: TATGACAGGAGTCCATCTCCAGACTGCACTTTTACA...GTTCATCATTCTTTTCAAATGTTGAGCCTTCCCCTGTGGATCTATAGTGTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR CCA 90 bp | AATGACACTATAGATCCACAGGGGAAGGCTCAACATTTGAAAAGAATGATGAACATACAAACACTGTGGTaGAGATGTATGAACACAAAA | + |
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Preference number: 2 (lower is better) Translates to: NDTIDPQGKAQHLKRMMNIQTLW*RCMNTK Trigger: TTTTGTGTTCATACATCTCCACCACAGTGTTTGTAT...GTTCATCATTCTTTTCAAATGTTGAGCCTTCCCCTGTGGATCTATAGTGTCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR GCA 72 bp | GCCAGAAGAAATGGCTCAGGGGTTAAGAGCACTGCTTaGCTTTCCAGAGGACCTGGGTTCAGTTCCCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: ARRNGSGVKSTA*LSRGPGFSSQS Trigger: ACTCTGGGAACTGAACCCAGGTCCTCTGGAAAGGCAAGCAGTGCTCTTAACCCCTGAGCCATTTCTTCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR TCA 72 bp | AGAAGACAAACCTATTCTTACTGTAACTTGAGATGCTaGGGCTGGTTGGCATCCATGGGAGGCCTCCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: RRQTYSYCNLRC*GWLASMGGLPS Trigger: AGAGGGGAGGCCTCCCATGGATGCCAACCAGCCTCAGCATCTCAAGTTACAGTAAGAATAGGTTTGTCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR GCA 72 bp | CTGCACTTGAGGAGGATTTCTACATCCTGTCTTTCATaGGGCAACAGGAGGCATACTGAGGTAGAGGAGACT | + |
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Preference number: 3 (lower is better) Translates to: LHLRRISTSCLS*GNRRHTEVEET Trigger: AGTCTCCTCTACCTCAGTATGCCTCCTGTTGCCGCATGAAAGACAGGATGTAGAAATCCTCCTCAAGTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR CAA 90 bp | GTATCTAGCATAGAAACACACACACACACACACACACACACACACACACACTCTAGGATTGCAGGTTGGTaGGGAGACTTTGGAGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: VSSIETHTHTHTHTHTHSRIAGW*GDFGGA Trigger: TGCCCCTCCAAAGTCTCCCAACCAACCTGCAATCCT...AGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTATGCTAGATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR TCA 72 bp | GCTTACAACCATCTGCAATTCCAGATCCAGAGAATCTaGTGTCCTCTTCTGATCTTCAGTGGCACCAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: AYNHLQFQIQRI*CPLLIFSGTRH Trigger: GTGCCTGGTGCCACTGAAGATCAGAAGAGGACATCAGATTCTCTGGATCTGGAATTGCAGATGGTTGTAAGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR CCA 72 bp | ACAAGAATTGATCACAGGAGCTTGAGAGATAGCTCATaGCAAAGAGTACTGGCTGTTCTTCCAGGGGACACG | + |
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Preference number: 3 (lower is better) Translates to: TRIDHRSLRDSS*QRVLAVLPGDT Trigger: CGTGTCCCCTGGAAGAACAGCCAGTACTCTTTGCCATGAGCTATCTCTCAAGCTCCTGTGATCAATTCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR-3UTR CAA 90 bp | GTATCTAGCATAGAAACACACACACACACACACACACACACACACACACACTCTGAAGGGGAAGAAGGATaGCAGGTTGGTTGGGAGACT | + |
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Preference number: 3 (lower is better) Translates to: VSSIETHTHTHTHTHTHSEGEEG*QVGWET Trigger: AGTCTCCCAACCAACCTGCAATCCTTCTTCCCCTTC...AGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTATGCTAGATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR TCA 72 bp | TTCTTTGCATGTTATTTCTCGGACGAGCTTTGCCTTTaGGCCCTCTGCCTGCACTTGAGGAGGATTTCTACA | + |
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Preference number: 3 (lower is better) Translates to: FFACYFSDELCL*ALCLHLRRIST Trigger: TGTAGAAATCCTCCTCAAGTGCAGGCAGAGGGCTCAAAGGCAAAGCTCGTCCGAGAAATAACATGCAAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| 3UTR TCA 72 bp | TTCACAAGAGAAGACAAACCTATTCTTACTGTAACTTaGGATGCTGAGGCTGGTTGGCATCCATGGGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: FTREDKPILTVT*DAEAGWHPWEA Trigger: GGCCTCCCATGGATGCCAACCAGCCTCAGCATCTCAAGTTACAGTAAGAATAGGTTTGTCTTCTCTTGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| 3UTR CCA 72 bp | GATCCAGAGAATCTGATGTCCTCTTCTGATCTTCAGTaGCACCAGGCACTCATGTGGTACACAGAATTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: DPENLMSSSDLQ*HQALMWYTEFK Trigger: CTTGAATTCTGTGTACCACATGAGTGCCTGGTGCCACTGAAGATCAGAAGAGGACATCAGATTCTCTGGATC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| 3UTR CCA 72 bp | GCTATTCCATTCACATTAAGGTGTTTGAGTCACACATaGCAGGGCACTCCTTCAGTCTTAAGGTTTGGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: AIPFTLRCLSHT*QGTPSVLRFGS Trigger: ACTCCCAAACCTTAAGACTGAAGGAGTGCCCTGCCATGTGTGACTCAAACACCTTAATGTGAATGGAATAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| 3UTR CCA 72 bp | GTCTGGAGATGGACTCCTGTCATAAAGATCAAGCCATaGCTTTTTAGAGATCATGAGTTCCTGTTTGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VWRWTPVIKIKP*LFRDHEFLFAV Trigger: CACTGCAAACAGGAACTCATGATCTCTAAAAAGCCATGGCTTGATCTTTATGACAGGAGTCCATCTCCAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| 3UTR GCA 72 bp | CCTGTTTGCAGTGTAGTTTTTCCAGTTCTGTTTCTTTaGATGTTATTTCTCGGACGAGCTTTGCCTTTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: PVCSVVFPVLFL*MLFLGRALPLS Trigger: GCTCAAAGGCAAAGCTCGTCCGAGAAATAACATGCAAAGAAACAGAACTGGAAAAACTACACTGCAAACAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| 3UTR-3UTR CAA 90 bp | AATGACACTATAGATCCACAGGGGAAGGCTCAACATTTGAAAAGAATGATGAACTTCACATTAAGGTGTTaGAGTCACACATGGCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: NDTIDPQGKAQHLKRMMNFTLRC*SHTWQG Trigger: GCCCTGCCATGTGTGACTCAAACACCTTAATGTGAA...GTTCATCATTCTTTTCAAATGTTGAGCCTTCCCCTGTGGATCTATAGTGTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| 3UTR TCA 72 bp | TGTAATTCCAGTCCCAGAAAATACAATGGCCTCTTCTaGCTTTCTCTGGTACCATTCATGTACATGGTACCA | + |
|
Preference number: 3 (lower is better) Translates to: CNSSPRKYNGLF*LSLVPFMYMVP Trigger: TGGTACCATGTACATGAATGGTACCAGAGAAAGTCAGAAGAGGCCATTGTATTTTCTGGGACTGGAATTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| 3UTR CCA 72 bp | GCCTCTTCTGACTTTCTCTGGTACCATTCATGTACATaGTACCAATACATATGTGCAAGCAAAGTACTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: ASSDFLWYHSCT*YQYICASKVLH Trigger: ATGCAGTACTTTGCTTGCACATATGTATTGGTACCATGTACATGAATGGTACCAGAGAAAGTCAGAAGAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| 3UTR CCA 72 bp | GTCCCAGAAAATACAATGGCCTCTTCTGACTTTCTCTaGTACCATTCATGTACATGGTACCAATACATATGT | + |
|
Preference number: 3 (lower is better) Translates to: VPENTMASSDFL*YHSCTWYQYIC Trigger: ACATATGTATTGGTACCATGTACATGAATGGTACCAGAGAAAGTCAGAAGAGGCCATTGTATTTTCTGGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| 3UTR CAA 72 bp | GGGTGGATGGGGTCAGGGAGAGAAGGTGGGAGAAGGTaGAGAGGAGAGGAGGAAGAGAAACTGGGGTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GWMGSGREGGRR*RGEEEEKLGLR Trigger: TCTCAACCCCAGTTTCTCTTCCTCCTCTCCTCTCAACCTTCTCCCACCTTCTCTCCCTGACCCCATCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR TCA 90 bp | GCTCAGGGGTTAAGAGCACTGCTTGCCTTTCCAGAGGACCTGGGTTCAGTTCCCCGTTCAGCTTCAAGGTaGGGGTGTCTATCTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AQGLRALLAFPEDLGSVPRSASR*GCLSFP Trigger: AGGGAAAGATAGACACCCTCACCTTGAAGCTGAACG...GGGAACTGAACCCAGGTCCTCTGGAAAGGCAAGCAGTGCTCTTAACCCCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR TCA 90 bp | GCTCAGGGGTTAAGAGCACTGCTTGCCTTTCCAGAGGACCTGGGTTCAGTTCCCAACACAGCTCCGTCTTaGAGGTATGCACAGTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AQGLRALLAFPEDLGSVPNTAPS*RYAQLP Trigger: AGGCAACTGTGCATACCTTCAAGACGGAGCTGTGTT...GGGAACTGAACCCAGGTCCTCTGGAAAGGCAAGCAGTGCTCTTAACCCCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR TCA 90 bp | GCTCAGGGGTTAAGAGCACTGCTTGCCTTTCCAGAGGACCTGGGTTCAGTTCCCTACAATAAGGGTCACTaGCAACACCAGGCAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AQGLRALLAFPEDLGSVPYNKGH*QHQAED Trigger: ATCCTCTGCCTGGTGTTGTCAGTGACCCTTATTGTA...GGGAACTGAACCCAGGTCCTCTGGAAAGGCAAGCAGTGCTCTTAACCCCTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR GCA 90 bp | AATGGCTCAGGGGTTAAGAGCACTGCTTGCCTTTCCAGAGGACCTGGGTTCAGTGAGTTTGCAGCTCTCTaGAGGGCTTCTTGGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NGSGVKSTACLSRGPGFSEFAAL*RASWRF Trigger: GAACCTCCAAGAAGCCCTGCAGAGAGCTGCAAACTC...ACTGAACCCAGGTCCTCTGGAAAGGCAAGCAGTGCTCTTAACCCCTGAGCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR TCA 90 bp | AATGGCTCAGGGGTTAAGAGCACTGCTTGCCTTTCCAGAGGACCTGGGTTCAGTGCTTCTTGGAGGTTCTaGTTCTTCTGTAGAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NGSGVKSTACLSRGPGFSASWRF*FFCRSS Trigger: GGAGCTTCTACAGAAGAATCAGAACCTCCAAGAAGC...ACTGAACCCAGGTCCTCTGGAAAGGCAAGCAGTGCTCTTAACCCCTGAGCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR GCA 90 bp | AATGGCTCAGGGGTTAAGAGCACTGCTTGCCTTTCCAGAGGACCTGGGTTCAGTAAGTTTGCAGCTCTTTaGAGGGCTTCTTGGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NGSGVKSTACLSRGPGFSKFAAL*RASWRF Trigger: GAACCTCCAAGAAGCCCTGCAAAGAGCTGCAAACTT...ACTGAACCCAGGTCCTCTGGAAAGGCAAGCAGTGCTCTTAACCCCTGAGCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR CCA 90 bp | AATGGCTCAGGGGTTAAGAGCACTGCTTGCCTTTCCAGAGGACCTGGGTTCAGTGCTCCTCCTGCTCTTTaGATTTCTCGTTCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NGSGVKSTACLSRGPGFSAPPAL*ISRSAS Trigger: TGAAGCTGAACGAGAAATCCAAAGAGCAGGAGGAGC...ACTGAACCCAGGTCCTCTGGAAAGGCAAGCAGTGCTCTTAACCCCTGAGCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR GCA 90 bp | GCTCAGGGGTTAAGAGCACTGCTTGCCTTTCCAGAGGACCTGGGTTCAGTTCCCGAAGGTATGCACAGTTaGCTGATGAATATAGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: AQGLRALLAFPEDLGSVPEGMHS*LMNIAV Trigger: TACAGCTATATTCATCAGGCAACTGTGCATACCTTC...GGGAACTGAACCCAGGTCCTCTGGAAAGGCAAGCAGTGCTCTTAACCCCTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| 3UTR CAA 72 bp | GTTCTGTTTCTTTGCATGTTATTTCTCGGACGAGCTTaGCCTTTGAGCCCTCTGCCTGCACTTGAGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLFLCMLFLGRA*PLSPLPALEED Trigger: ATCCTCCTCAAGTGCAGGCAGAGGGCTCAAAGGCAAAGCTCGTCCGAGAAATAACATGCAAAGAAACAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR TCA 90 bp | GTATCTAGCATAGAAACACACACACACACACACACACACACACACACACACTCTTCTCTGGGACTCCTCTaGAGAGTTTGCAGCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSSIETHTHTHTHTHTHSSLGLL*RVCSSL Trigger: CAAAGAGCTGCAAACTCTTCAGAGGAGTCCCAGAGA...AGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTATGCTAGATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR GCA 90 bp | AGCTTACAACCATCTGCAATTCCAGATCCAGAGAATCTGATGTCCTCTTCTGATGTGTTTTCTGCCTTCTaGTGGGCTAACATCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLQPSAIPDPENLMSSSDVFSAF*WANICP Trigger: AGGGCAGATGTTAGCCCAGCAGAAGGCAGAAAACAC...ATCAGAAGAGGACATCAGATTCTCTGGATCTGGAATTGCAGATGGTTGTAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR GCA 90 bp | AAACCGTCTGTAATTCCAGTCCCAGAAAATACAATGGCCTCTTCTGACTTTCTCGAGTTTGCAGCTCTTTaGAGGGCTTCTTGGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPSVIPVPENTMASSDFLEFAAL*RASWRF Trigger: GAACCTCCAAGAAGCCCTGCAAAGAGCTGCAAACTC...GAGAAAGTCAGAAGAGGCCATTGTATTTTCTGGGACTGGAATTACAGACGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR GCA 90 bp | AAACCGTCTGTAATTCCAGTCCCAGAAAATACAATGGCCTCTTCTGACTTTCTCTGCAGAAGCTCCTCCTaGTCTTTGGATTTCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KPSVIPVPENTMASSDFLCRSSS*SLDFSS Trigger: GGACGAGAAATCCAAAGAGCAGGAGGAGCTTCTGCA...GAGAAAGTCAGAAGAGGCCATTGTATTTTCTGGGACTGGAATTACAGACGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR CCA 90 bp | CTGTCTCATCTTCTCAAGGATGTATCTAGCATAGAAACACACACACACACACACAGCAGGGAACCACCATaGGGAAGAAAGCAAATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSHLLKDVSSIETHTHTHSREPP*GRKQMQ Trigger: CTGCATTTGCTTTCTTCCCCATGGTGGTTCCCTGCT...GTGTGTGTGTGTGTGTGTTTCTATGCTAGATACATCCTTGAGAAGATGAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR CCA 90 bp | AGCTTACAACCATCTGCAATTCCAGATCCAGAGAATCTGATGTCCTCTTCTGATTTTTCTGCCTTCTGCTaGGCTAACATCTGCCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLQPSAIPDPENLMSSSDFSAFC*ANICPS Trigger: GGAAGGGCAGATGTTAGCCCAGCAGAAGGCAGAAAA...ATCAGAAGAGGACATCAGATTCTCTGGATCTGGAATTGCAGATGGTTGTAAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR CCA 90 bp | GTATCTAGCATAGAAACACACACACACACACACACACACACACACACACACTCTGCTCCTCCTGCTCTTTaGATTTCTCGTTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSSIETHTHTHTHTHTHSAPPAL*ISRSAS Trigger: AGAAGCTGAACGAGAAATCCAAAGAGCAGGAGGAGC...AGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTATGCTAGATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| 3UTR CAA 72 bp | CAGAGGACCTGGGTTCAGTTCCCAGAGTCTATAGGATaGTTCAAAACCGTCTGTAATTCCAGTCCCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QRTWVQFPESIG*FKTVCNSSPRK Trigger: TTTTCTGGGACTGGAATTACAGACGGTTTTGAACAATCCTATAGACTCTGGGAACTGAACCCAGGTCCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR TCA 90 bp | AAACCGTCTGTAATTCCAGTCCCAGAAAATACAATGGCCTCTTCTGACTTTCTCTGTCTATCTTTCCCTTaGGTTCTCTCTGGGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KPSVIPVPENTMASSDFLCLSFP*VLSGTP Trigger: AGGAGTCCCAGAGAGAACTCAAGGGAAAGATAGACA...GAGAAAGTCAGAAGAGGCCATTGTATTTTCTGGGACTGGAATTACAGACGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR CCA 90 bp | AAACCGTCTGTAATTCCAGTCCCAGAAAATACAATGGCCTCTTCTGACTTTCTCCCCTTGAGTTCTCTCTaGGACTCCTCTGAAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KPSVIPVPENTMASSDFLPLSSL*DSSEEF Trigger: AAACTCTTCAGAGGAGTCCCAGAGAGAACTCAAGGG...GAGAAAGTCAGAAGAGGCCATTGTATTTTCTGGGACTGGAATTACAGACGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR CCA 90 bp | AATGACACTATAGATCCACAGGGGAAGGCTCAACATTTGAAAAGAATGATGAACGCTCCTCCTGCTCTTTaGATTTCTCGTCCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NDTIDPQGKAQHLKRMMNAPPAL*ISRPAS Trigger: GGAAGCTGGACGAGAAATCCAAAGAGCAGGAGGAGC...GTTCATCATTCTTTTCAAATGTTGAGCCTTCCCCTGTGGATCTATAGTGTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR TCA 90 bp | CTGTCTCATCTTCTCAAGGATGTATCTAGCATAGAAACACACACACACACACACTTGTGGACAAGGACCTaGAAAGTTTGCAGCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSHLLKDVSSIETHTHTHLWTRT*KVCSSL Trigger: CAAAGAGCTGCAAACTTTTCAGGTCCTTGTCCACAA...GTGTGTGTGTGTGTGTGTTTCTATGCTAGATACATCCTTGAGAAGATGAGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR GCA 90 bp | CTGTCTCATCTTCTCAAGGATGTATCTAGCATAGAAACACACACACACACACACGGGGAAGAAAGCAAATaGAGACCTTTAGGCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSHLLKDVSSIETHTHTHGEESK*RPLGFL Trigger: CAAGAAGCCTAAAGGTCTGCATTTGCTTTCTTCCCC...GTGTGTGTGTGTGTGTGTTTCTATGCTAGATACATCCTTGAGAAGATGAGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| 3UTR CAA 72 bp | GGAGACATAACTGATACAAGAATTGATCACAGGAGCTaGAGAGATAGCTCATGGCAAAGAGTACTGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GDITDTRIDHRS*RDSSWQRVLAV Trigger: AACAGCCAGTACTCTTTGCCATGAGCTATCTCTCAAGCTCCTGTGATCAATTCTTGTATCAGTTATGTCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| 3UTR CAA 72 bp | TGGACATCTTATGCTATTCCATTCACATTAAGGTGTTaGAGTCACACATGGCAGGGCACTCCTTCAGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: WTSYAIPFTLRC*SHTWQGTPSVL Trigger: TAAGACTGAAGGAGTGCCCTGCCATGTGTGACTCAAACACCTTAATGTGAATGGAATAGCATAAGATGTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR GCA 90 bp | AATGACACTATAGATCCACAGGGGAAGGCTCAACATTTGAAAAGAATGATGAACTGTAGAAGCTCCTCCTaGTCTTTGGATTTCTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NDTIDPQGKAQHLKRMMNCRSSS*SLDFSF Trigger: GAACGAGAAATCCAAAGAGCAGGAGGAGCTTCTACA...GTTCATCATTCTTTTCAAATGTTGAGCCTTCCCCTGTGGATCTATAGTGTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR CCA 90 bp | AATGACACTATAGATCCACAGGGGAAGGCTCAACATTTGAAAAGAATGATGAACAACGGGGAGGTGGTATaGGAAATTGCTTGTAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: NDTIDPQGKAQHLKRMMNNGEVV*EIACKM Trigger: CATCTTACAAGCAATTTCCCATACCACCTCCCCGTT...GTTCATCATTCTTTTCAAATGTTGAGCCTTCCCCTGTGGATCTATAGTGTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| 3UTR CAA 72 bp | GATACAAAGATTTCAAACATCTGGATCCACCAGTATTaGCTTCTGGTCCTTGTCTTTGTTGAGGTGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: DTKISNIWIHQY*LLVLVFVEVNC Trigger: ACAGTTCACCTCAACAAAGACAAGGACCAGAAGCAAATACTGGTGGATCCAGATGTTTGAAATCTTTGTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| 3UTR CAA 72 bp | TTTGGAGGGGCAAGGCCAGTGTATATGGATAAACAATaGAACTCACACGTTTTGATACAAAGATTTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: FGGARPVYMDKQ*NSHVLIQRFQT Trigger: TGTTTGAAATCTTTGTATCAAAACGTGTGAGTTCAATTGTTTATCCATATACACTGGCCTTGCCCCTCCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS-3UTR CAA 90 bp | GCTCAGGGGTTAAGAGCACTGCTTGCCTTTCCAGAGGACCTGGGTTCAGTTCCCACTCCTCTGAAGAGTTaGCAGCTCTTTGCAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: AQGLRALLAFPEDLGSVPTPLKS*QLFAGL Trigger: AAGCCCTGCAAAGAGCTGCAAACTCTTCAGAGGAGT...GGGAACTGAACCCAGGTCCTCTGGAAAGGCAAGCAGTGCTCTTAACCCCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS GCA 90 bp | GGAGTTCCATTCTCCCATAGCCATGGTTGGCCAGGCTTCTTCCGATaGAATCCAATCCAGAACGGGGAGGTGGTATGGGAAATTGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GVPFSHSHGWPGFFR*NPIQNGEVVWEIAC Trigger: ACAAGCAATTTCCCATACCACCTCCCCGTTCTGGATTGGATTGCATCGGAAGAAGCCTGGCCAACCATGGCTATGGGAGAATGGAACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032265.13 ENSMUST00000182784.4 ENSMUST00000183258.8 ENSMUST00000203564.2 |
||
| CDS-3UTR CAA 90 bp | AATGGCTCAGGGGTTAAGAGCACTGCTTGCCTTTCCAGAGGACCTGGGTTCAGTGTGTCTATCTTTCCCTaGAGTTCTCTCTGGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: NGSGVKSTACLSRGPGFSVSIFP*SSLWDS Trigger: GGAGTCCCAGAGAGAACTCAAGGGAAAGATAGACAC...ACTGAACCCAGGTCCTCTGGAAAGGCAAGCAGTGCTCTTAACCCCTGAGCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS TCA 90 bp | GGTGAGGGTGTCTATCTTTCCCTTGAGTTCTCTCTGGGACTCCTCTaGAGAGTTTGCAGCTCTCTGCAGGGCTTCTTGGAGGTTCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GEGVYLSLEFSLGLL*RVCSSLQGFLEVLN Trigger: ATTCAGAACCTCCAAGAAGCCCTGCAGAGAGCTGCAAACTCTTCAGAGGAGTCCCAGAGAGAACTCAAGGGAAAGATAGACACCCTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS CCA 90 bp | TTCAGCTTCAAGGTGAGGGTGTCTATCTTTCCCTTGAGTTCTCTCTaGGACTCCTCTGAAGAGTTTGCAGCTCTCTGCAGGGCTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: FSFKVRVSIFPLSSL*DSSEEFAALCRASW Trigger: CCAAGAAGCCCTGCAGAGAGCTGCAAACTCTTCAGAGGAGTCCCAGAGAGAACTCAAGGGAAAGATAGACACCCTCACCTTGAAGCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS TCA 90 bp | GGTGATGGTGTCTATCTTTCCCTTGAGTTCTCTCTGGGACTCCTCTaGAGAGTTTGCAGCTCTTTGCAGGGCTTCTTGGAGGTTCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: GDGVYLSLEFSLGLL*RVCSSLQGFLEVLI Trigger: AATCAGAACCTCCAAGAAGCCCTGCAAAGAGCTGCAAACTCTTCAGAGGAGTCCCAGAGAGAACTCAAGGGAAAGATAGACACCATCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS TCA 90 bp | TCCTCTGAAGAGTTTGCAGCTCTTTGCAGGGCTTCTTGGAGGTTCTaGTTCTTCTGTAGAAGCTCCTCCTGCTCTTTGGATTTCTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSEEFAALCRASWRF*FFCRSSSCSLDFSF Trigger: GAACGAGAAATCCAAAGAGCAGGAGGAGCTTCTACAGAAGAATCAGAACCTCCAAGAAGCCCTGCAAAGAGCTGCAAACTCTTCAGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS TCA 90 bp | GGACCTGAAAAGTTTGCAGCTCTTTGCAGGGCTTCTTGGAGGTTCTaGTTCTTCTGTAGAAGCTCCTCCTGCTCTTTGGATTTCTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GPEKFAALCRASWRF*FFCRSSSCSLDFSF Trigger: GAACGAGAAATCCAAAGAGCAGGAGGAGCTTCTACAGAAGAATCAGAACCTCCAAGAAGCCCTGCAAAGAGCTGCAAACTTTTCAGGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
||
| CDS CCA 90 bp | CCAGGCTTCTTCCGATGCAATCCAATCCAGAACGGGGAGGTGGTATaGGAAATTGCTTGTAAGATGAATGTCAGATCATCTGCACCATTA | + |
|
Preference number: 5 (lower is better) Translates to: PGFFRCNPIQNGEVV*EIACKMNVRSSAPL Trigger: TAATGGTGCAGATGATCTGACATTCATCTTACAAGCAATTTCCCATACCACCTCCCCGTTCTGGATTGGATTGCATCGGAAGAAGCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032265.13 ENSMUST00000182784.4 ENSMUST00000183258.8 ENSMUST00000203564.2 |
||
| CDS-3UTR CAA 90 bp | AAACCGTCTGTAATTCCAGTCCCAGAAAATACAATGGCCTCTTCTGACTTTCTCAGAGTTTGCAGCTCTTaGCAGGGCTTCTTGGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KPSVIPVPENTMASSDFLRVCSS*QGFLEV Trigger: AACCTCCAAGAAGCCCTGCAAAGAGCTGCAAACTCT...GAGAAAGTCAGAAGAGGCCATTGTATTTTCTGGGACTGGAATTACAGACGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| CDS-3UTR CAA 90 bp | AATGACACTATAGATCCACAGGGGAAGGCTCAACATTTGAAAAGAATGATGAACACTCCTCTGAAGAGTTaGCAGCTCTCTGCAGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: NDTIDPQGKAQHLKRMMNTPLKS*QLSAGL Trigger: AAGCCCTGCAGAGAGCTGCAAACTCTTCAGAGGAGT...GTTCATCATTCTTTTCAAATGTTGAGCCTTCCCCTGTGGATCTATAGTGTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| CDS TCA 90 bp | CTGAATGCAATTAGAATGCAGTTTTCAGCGAACACAGCTCCGTCTTaGAGGTATGCACAGTTGCCTGATGAATATAGCTGTAAAGAAACG | + |
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Preference number: 5 (lower is better) Translates to: LNAIRMQFSANTAPS*RYAQLPDEYSCKET Trigger: CGTTTCTTTACAGCTATATTCATCAGGCAACTGTGCATACCTTCAAGACGGAGCTGTGTTCGCTGAAAACTGCATTCTAATTGCATTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032265.13 ENSMUST00000182784.4 ENSMUST00000183258.8 |
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| CDS-3UTR CAA 90 bp | AATGACACTATAGATCCACAGGGGAAGGCTCAACATTTGAAAAGAATGATGAACAAAGTTTGCAGCTCTTaGCAGGGCTTCTTGGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: NDTIDPQGKAQHLKRMMNKVCSS*QGFLEV Trigger: AACCTCCAAGAAGCCCTGCAAAGAGCTGCAAACTTT...GTTCATCATTCTTTTCAAATGTTGAGCCTTCCCCTGTGGATCTATAGTGTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| CDS-3UTR CAA 90 bp | AATGACACTATAGATCCACAGGGGAAGGCTCAACATTTGAAAAGAATGATGAACAAGGACCTGAAAAGTTaGCAGCTCTTTGCAGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: NDTIDPQGKAQHLKRMMNKDLKS*QLFAGL Trigger: AAGCCCTGCAAAGAGCTGCAAACTTTTCAGGTCCTT...GTTCATCATTCTTTTCAAATGTTGAGCCTTCCCCTGTGGATCTATAGTGTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| CDS-3UTR CAA 90 bp | GTATCTAGCATAGAAACACACACACACACACACACACACACACACACACACTCTCTTTCAGTTCCTTCTTaGATTCCTGTGAAGTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: VSSIETHTHTHTHTHTHSLSVPS*IPVKCF Trigger: AAAACACTTCACAGGAATCAAAGAAGGAACTGAAAG...AGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTATGCTAGATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| CDS-3UTR CAA 90 bp | CTGTCTCATCTTCTCAAGGATGTATCTAGCATAGAAACACACACACACACACACCCTGGTCTTAAAGAATaGAAAATTCAAAGGAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: LSHLLKDVSSIETHTHTHPGLKE*KIQRSS Trigger: GGAACTCCTTTGAATTTTCAATTCTTTAAGACCAGG...GTGTGTGTGTGTGTGTGTTTCTATGCTAGATACATCCTTGAGAAGATGAGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| CDS CAA 72 bp | GCCAGAGCCAGTCTTGTGGACAAGGACCTGAAGAGTTaGCAGCTCTCTGCAGGGCTTCTTGGAGGTTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: ARASLVDKDLKS*QLSAGLLGGSE Trigger: TTCAGAACCTCCAAGAAGCCCTGCAGAGAGCTGCAAACTCTTCAGGTCCTTGTCCACAAGACTGGCTCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203564.2 |
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| CDS TCA 72 bp | GTCTATCTTTCCCTTGAGTTCTCTCTGGGACTCCTCTaGAGAGTTTGCAGCTCTCTGCAGGGCTTCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: VYLSLEFSLGLL*RVCSSLQGFLE Trigger: CTCCAAGAAGCCCTGCAGAGAGCTGCAAACTCTTCAGAGGAGTCCCAGAGAGAACTCAAGGGAAAGATAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| CDS TCA 72 bp | TTCTTTATGCCAGAGCCAGTCTTGTGGACAAGGACCTaGAGAGTTTGCAGCTCTCTGCAGGGCTTCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: FFMPEPVLWTRT*RVCSSLQGFLE Trigger: CTCCAAGAAGCCCTGCAGAGAGCTGCAAACTCTTCAGGTCCTTGTCCACAAGACTGGCTCTGGCATAAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203564.2 |
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| CDS CCA 72 bp | AAGGTGAGGGTGTCTATCTTTCCCTTGAGTTCTCTCTaGGACTCCTCTGAAGAGTTTGCAGCTCTCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: KVRVSIFPLSSL*DSSEEFAALCR Trigger: CCTGCAGAGAGCTGCAAACTCTTCAGAGGAGTCCCAGAGAGAACTCAAGGGAAAGATAGACACCCTCACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| CDS CAA 72 bp | GCCAGAGCCAGTCTTGTGGACAAGGACCTGAAAAGTTaGCAGCTCTTTGCAGGGCTTCTTGGAGGTTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: ARASLVDKDLKS*QLFAGLLGGSD Trigger: ATCAGAACCTCCAAGAAGCCCTGCAAAGAGCTGCAAACTTTTCAGGTCCTTGTCCACAAGACTGGCTCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| CDS TCA 72 bp | GTCTATCTTTCCCTTGAGTTCTCTCTGGGACTCCTCTaGAGAGTTTGCAGCTCTTTGCAGGGCTTCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: VYLSLEFSLGLL*RVCSSLQGFLE Trigger: CTCCAAGAAGCCCTGCAAAGAGCTGCAAACTCTTCAGAGGAGTCCCAGAGAGAACTCAAGGGAAAGATAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| CDS CCA 72 bp | GAGGATGACCAGAGTCATAGCAGCAGGGAACCACCATaGGGAAGAAAGCAAATGCAGACCTTTAGGCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: EDDQSHSSREPP*GRKQMQTFRLL Trigger: AAGAAGCCTAAAGGTCTGCATTTGCTTTCTTCCCCATGGTGGTTCCCTGCTGCTATGACTCTGGTCATCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032265.13 ENSMUST00000182784.4 |
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| CDS GCA 72 bp | TCCTTCTTTGATTCCTGTGAAGTGTTTTCTGCCTTCTaGTGGGCTAACATCTGCCCTTCCAGGATACGATCC | + |
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Preference number: 6 (lower is better) Translates to: SFFDSCEVFSAF*WANICPSRIRS Trigger: GGATCGTATCCTGGAAGGGCAGATGTTAGCCCAGCAGAAGGCAGAAAACACTTCACAGGAATCAAAGAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032265.13 ENSMUST00000162815.2 |
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| CDS CCA 72 bp | TTCTTTGATTCCTGTGAAGTGTTTTCTGCCTTCTGCTaGGCTAACATCTGCCCTTCCAGGATACGATCCTGC | + |
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Preference number: 6 (lower is better) Translates to: FFDSCEVFSAFC*ANICPSRIRSC Trigger: GCAGGATCGTATCCTGGAAGGGCAGATGTTAGCCCAGCAGAAGGCAGAAAACACTTCACAGGAATCAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032265.13 ENSMUST00000162815.2 |
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| CDS CCA 72 bp | AGCTCCTCCTGCTCTTTGGATTTCTCGTTCAGCTTCTaGGTGAGGGTGTCTATCTTTCCTTTCAGTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SSSCSLDFSFSF*VRVSIFPFSSF Trigger: GAAGGAACTGAAAGGAAAGATAGACACCCTCACCCAGAAGCTGAACGAGAAATCCAAAGAGCAGGAGGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032265.13 ENSMUST00000162815.2 |
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| CDS CAA 72 bp | TCGTTCAGCTTCAAGGTGAGGGTGTCTATCTTTCCCTaGAGTTCTCTCTGGGACTCCTCTGAAGAGTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: SFSFKVRVSIFP*SSLWDSSEEFA Trigger: TGCAAACTCTTCAGAGGAGTCCCAGAGAGAACTCAAGGGAAAGATAGACACCCTCACCTTGAAGCTGAACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032265.13 |
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| CDS CCA 72 bp | AAATTCAAAGGAGTTCCATTCTCCCATAGCCATGGTTaGCCAGGCTTCTTCCGATGCAATCCAATCCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: KFKGVPFSHSHG*PGFFRCNPIQN Trigger: GTTCTGGATTGGATTGCATCGGAAGAAGCCTGGCCAACCATGGCTATGGGAGAATGGAACTCCTTTGAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032265.13 ENSMUST00000182784.4 ENSMUST00000183258.8 ENSMUST00000203564.2 |
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| CDS CCA 72 bp | TTCCGATGCAATCCAATCCAGAACGGGGAGGTGGTATaGGAAATTGCTTGTAAGATGAATGTCAGATCATCT | + |
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Preference number: 6 (lower is better) Translates to: FRCNPIQNGEVV*EIACKMNVRSS Trigger: AGATGATCTGACATTCATCTTACAAGCAATTTCCCATACCACCTCCCCGTTCTGGATTGGATTGCATCGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032265.13 ENSMUST00000182784.4 ENSMUST00000183258.8 ENSMUST00000203564.2 |
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| CDS TCA 72 bp | ATTAGAATGCAGTTTTCAGCGAACACAGCTCCGTCTTaGAGGTATGCACAGTTGCCTGATGAATATAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: IRMQFSANTAPS*RYAQLPDEYSC Trigger: ACAGCTATATTCATCAGGCAACTGTGCATACCTTCAAGACGGAGCTGTGTTCGCTGAAAACTGCATTCTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032265.13 ENSMUST00000182784.4 ENSMUST00000183258.8 ENSMUST00000203564.2 |
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