Pregenerated sensors for OLIG3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045591Ensembl transcript IDs: ENSMUST00000053225.7
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCGAGCAGTCTCCCTTTCCCTCCTGGCCCGGCACTGCGACCCCTaGCTCAGCTCTCCCTTCCTCCTCCCGGCCGGGCCAGCCCGTGGC | + |
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Preference number: 1 (lower is better) Translates to: GRAVSLSLLARHCDP*LSSPFLLPAGPARG Trigger: GCCACGGGCTGGCCCGGCCGGGAGGAGGAAGGGAGAGCTGAGGCAGGGGTCGCAGTGCCGGGCCAGGAGGGAAAGGGAGACTGCTCGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR CCA 90 bp | CGCGCGCCCACCCTCCCGCAGGCCGAGCAGTCTCCCTTTCCCTCCTaGCCCGGCACTGCGACCCCTGCCTCAGCTCTCCCTTCCTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: RAPTLPQAEQSPFPS*PGTATPASALPSSS Trigger: GGAGGAGGAAGGGAGAGCTGAGGCAGGGGTCGCAGTGCCGGGCCAGGAGGGAAAGGGAGACTGCTCGGCCTGCGGGAGGGTGGGCGCGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR CCA 90 bp | AACAGCCCTAACGTTGGAATGAGATTTGAGGGACAGAGACAGACATaGGCTTGGGGGAAGAATCACATGTTCATTGAGTGTGAATCTCTG | + |
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Preference number: 1 (lower is better) Translates to: NSPNVGMRFEGQRQT*AWGKNHMFIECESL Trigger: CAGAGATTCACACTCAATGAACATGTGATTCTTCCCCCAAGCCCATGTCTGTCTCTGTCCCTCAAATCTCATTCCAACGTTAGGGCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR CCA 90 bp | ACAACAAATGCAGTTTTGACAAGAGCATACCACAGTGAGAAATACTaGCGTGGCATGAGGGAAAGAAGCATGCATGCAAAACAGGACTTC | + |
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Preference number: 1 (lower is better) Translates to: TTNAVLTRAYHSEKY*RGMRERSMHAKQDF Trigger: GAAGTCCTGTTTTGCATGCATGCTTCTTTCCCTCATGCCACGCCAGTATTTCTCACTGTGGTATGCTCTTGTCAAAACTGCATTTGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR TCA 90 bp | CCATCGTTAAACAACAAATGCAGTTTTGACAAGAGCATACCACAGTaGGAAATACTGGCGTGGCATGAGGGAAAGAAGCATGCATGCAAA | + |
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Preference number: 1 (lower is better) Translates to: PSLNNKCSFDKSIPQ*EILAWHEGKKHACK Trigger: TTTGCATGCATGCTTCTTTCCCTCATGCCACGCCAGTATTTCTCACTGTGGTATGCTCTTGTCAAAACTGCATTTGTTGTTTAACGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR CCA 90 bp | GAGTACTTTGGAGAGCTCACTAATAAATCCTTGTTACAAGGAAAATaGCGCTATAGCCCGCACAACATGTTTAGACAAGATTCATTTAGA | + |
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Preference number: 1 (lower is better) Translates to: EYFGELTNKSLLQGK*RYSPHNMFRQDSFR Trigger: TCTAAATGAATCTTGTCTAAACATGTTGTGCGGGCTATAGCGCCATTTTCCTTGTAACAAGGATTTATTAGTGAGCTCTCCAAAGTACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR-3UTR CCA 90 bp | TACTGGCGTGGCATGAGGGAAAGAAGCATGCATGCAAAACAGGACTTCGGGTTCTTTGGCACGCCCCGCTaGGGTGGGTCAACTGGAATC | + |
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Preference number: 2 (lower is better) Translates to: YWRGMRERSMHAKQDFGFFGTPR*GGSTGI Trigger: GATTCCAGTTGACCCACCCCAGCGGGGCGTGCCAAA...GAACCCGAAGTCCTGTTTTGCATGCATGCTTCTTTCCCTCATGCCACGCCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR-3UTR GCA 90 bp | CATTTTATACAACCACAGACAGATATATGGAGTACTTTGGAGAGCTCACTAATACTCCTGGCCCGGCACTaGGACCCCTGCCTCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: HFIQPQTDIWSTLESSLILLARH*DPCLSS Trigger: AGAGCTGAGGCAGGGGTCGCAGTGCCGGGCCAGGAG...TATTAGTGAGCTCTCCAAAGTACTCCATATATCTGTCTGTGGTTGTATAAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR-3UTR GCA 90 bp | GGGCTTGGGGGAAGAATCACATGTTCATTGAGTGTGAATCTCTGTGCTCTGGCCCACATAAGAGGTTCATaGCCTGGGCTGAGAATCAAA | + |
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Preference number: 2 (lower is better) Translates to: GLGGRITCSLSVNLCALAHIRGS*PGLRIK Trigger: TTTGATTCTCAGCCCAGGGCATGAACCTCTTATGTG...GGCCAGAGCACAGAGATTCACACTCAATGAACATGTGATTCTTCCCCCAAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR CAA 90 bp | GAAAACCCACATAAGAGGTTCATGCCCTGGGCTGAGAATCAAAACTaGGATTCTGAAACAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: ENPHKRFMPWAENQN*DSETSSLSLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAGAGAGAGAGCTTGTTTCAGAATCCAAGTTTTGATTCTCAGCCCAGGGCATGAACCTCTTATGTGGGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR-3UTR TCA 90 bp | GGACAGAGACAGACATGGGCTTGGGGGAAGAATCACATGTTCATTGAGTGTGAACAACAAATGCAGTTTTaGCAAGAGCATACCACAGTG | + |
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Preference number: 2 (lower is better) Translates to: GQRQTWAWGKNHMFIECEQQMQF*QEHTTV Trigger: CACTGTGGTATGCTCTTGTCAAAACTGCATTTGTTG...TTCACACTCAATGAACATGTGATTCTTCCCCCAAGCCCATGTCTGTCTCTGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR-3UTR GCA 90 bp | CAGAGACAGACATGGGCTTGGGGGAAGAATCACATGTTCATTGAGTGTGAATCTGGAAAGAAGCATGCATaGAAAACAGGACTTCGGGTT | + |
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Preference number: 2 (lower is better) Translates to: QRQTWAWGKNHMFIECESGKKHA*KTGLRV Trigger: AACCCGAAGTCCTGTTTTGCATGCATGCTTCTTTCC...AGATTCACACTCAATGAACATGTGATTCTTCCCCCAAGCCCATGTCTGTCTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR CAA 90 bp | ACAGACAGATATATGGAGTACTTTGGAGAGCTCACTAATAAATCCTaGTTACAAGGAAAATGGCGCTATAGCCCGCACAACATGTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: TDRYMEYFGELTNKS*LQGKWRYSPHNMFR Trigger: TCTAAACATGTTGTGCGGGCTATAGCGCCATTTTCCTTGTAACAAGGATTTATTAGTGAGCTCTCCAAAGTACTCCATATATCTGTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR-3UTR CCA 90 bp | CATTTTATACAACCACAGACAGATATATGGAGTACTTTGGAGAGCTCACTAATACTGAGAATCAAAACTTaGATTCTGAAACAAGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: HFIQPQTDIWSTLESSLILRIKT*ILKQAL Trigger: GAGAGCTTGTTTCAGAATCCAAGTTTTGATTCTCAG...TATTAGTGAGCTCTCCAAAGTACTCCATATATCTGTCTGTGGTTGTATAAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR GCA 72 bp | GTCTCCCTTTCCCTCCTGGCCCGGCACTGCGACCCCTaGCTCAGCTCTCCCTTCCTCCTCCCGGCCGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: VSLSLLARHCDP*LSSPFLLPAGP Trigger: TGGCCCGGCCGGGAGGAGGAAGGGAGAGCTGAGGCAGGGGTCGCAGTGCCGGGCCAGGAGGGAAAGGGAGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR CCA 72 bp | GGGGTGGGTCAACTGGAATCTGGATCTGTAGGGCGCTaGCGAGGCCTGGGGCCGCGCGCCCACCCTCCCGCA | + |
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Preference number: 3 (lower is better) Translates to: GVGQLESGSVGR*RGLGPRAHPPA Trigger: TGCGGGAGGGTGGGCGCGCGGCCCCAGGCCTCGCCAGCGCCCTACAGATCCAGATTCCAGTTGACCCACCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR TCA 72 bp | CAAGAGCATACCACAGTGAGAAATACTGGCGTGGCATaGGGGAAAGAAGCATGCATGCAAAACAGGACTTCG | + |
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Preference number: 3 (lower is better) Translates to: QEHTTVRNTGVA*GKEACMQNRTS Trigger: CGAAGTCCTGTTTTGCATGCATGCTTCTTTCCCTCATGCCACGCCAGTATTTCTCACTGTGGTATGCTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR CCA 72 bp | GGAATGAGATTTGAGGGACAGAGACAGACATGGGCTTaGGGGAAGAATCACATGTTCATTGAGTGTGAATCT | + |
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Preference number: 3 (lower is better) Translates to: GMRFEGQRQTWA*GKNHMFIECES Trigger: AGATTCACACTCAATGAACATGTGATTCTTCCCCCAAGCCCATGTCTGTCTCTGTCCCTCAAATCTCATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR CCA 72 bp | ATAAGAGGTTCATGCCCTGGGCTGAGAATCAAAACTTaGATTCTGAAACAAGCTCTCTCTCTCTCTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: IRGSCPGLRIKT*ILKQALSLSLS Trigger: AGAGAGAGAGAGAGAGAGAGCTTGTTTCAGAATCCAAGTTTTGATTCTCAGCCCAGGGCATGAACCTCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR-3UTR CAA 90 bp | AGACATGGGCTTGGGGGAAGAATCACATGTTCATTGAGTGTGAATCTCTGTGCTGCTGAGAATCAAAACTaGGATTCTGAAACAAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: RHGLGGRITCSLSVNLCAAENQN*DSETSS Trigger: AGAGCTTGTTTCAGAATCCAAGTTTTGATTCTCAGC...AGCACAGAGATTCACACTCAATGAACATGTGATTCTTCCCCCAAGCCCATGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR TCA 72 bp | AACAACAAATGCAGTTTTGACAAGAGCATACCACAGTaGGAAATACTGGCGTGGCATGAGGGAAAGAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: NNKCSFDKSIPQ*EILAWHEGKKH Trigger: ATGCTTCTTTCCCTCATGCCACGCCAGTATTTCTCACTGTGGTATGCTCTTGTCAAAACTGCATTTGTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR TCA 72 bp | TCCACTGATCCCATCGTTAAACAACAAATGCAGTTTTaGCAAGAGCATACCACAGTGAGAAATACTGGCGTG | + |
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Preference number: 3 (lower is better) Translates to: STDPIVKQQMQF*QEHTTVRNTGV Trigger: CACGCCAGTATTTCTCACTGTGGTATGCTCTTGTCAAAACTGCATTTGTTGTTTAACGATGGGATCAGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR TCA 72 bp | CTCTCTCTCTCTCTCTCTCTCTCTCTCCATTGTCTCTaGAAAATCTATAAGGGCAGAGACAATCATAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: LSLSLSLSLHCL*KIYKGRDNHKC Trigger: ACACTTATGATTGTCTCTGCCCTTATAGATTTTTCAGAGACAATGGAGAGAGAGAGAGAGAGAGAGAGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR CCA 72 bp | GGAGAGCTCACTAATAAATCCTTGTTACAAGGAAAATaGCGCTATAGCCCGCACAACATGTTTAGACAAGAT | + |
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Preference number: 3 (lower is better) Translates to: GELTNKSLLQGK*RYSPHNMFRQD Trigger: ATCTTGTCTAAACATGTTGTGCGGGCTATAGCGCCATTTTCCTTGTAACAAGGATTTATTAGTGAGCTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR-3UTR CAA 90 bp | TCCTTGTTACAAGGAAAATGGCGCTATAGCCCGCACAACATGTTTAGACAAGATACAACAAATGCAGTTTaGACAAGAGCATACCACAGT | + |
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Preference number: 3 (lower is better) Translates to: SLLQGKWRYSPHNMFRQDTTNAV*TRAYHS Trigger: ACTGTGGTATGCTCTTGTCAAAACTGCATTTGTTGT...ATCTTGTCTAAACATGTTGTGCGGGCTATAGCGCCATTTTCCTTGTAACAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR GCA 90 bp | GGATCTGTAGGGCGCTGGCGAGGCCTGGGGCCGCGCGCCCACCCTCCCGCAGGCAGTGCTGGAAGCCGCTaGCCAATTGTAGCGCGGGCG | + |
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Preference number: 4 (lower is better) Translates to: GSVGRWRGLGPRAHPPAGSAGSR*PIVARA Trigger: CGCCCGCGCTACAATTGGGCAGCGGCTTCCAGCACT...GCCTGCGGGAGGGTGGGCGCGCGGCCCCAGGCCTCGCCAGCGCCCTACAGATCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CCA 90 bp | ATCTGGATCTGTAGGGCGCTGGCGAGGCCTGGGGCCGCGCGCCCACCCTCCCGCCGCGCAGACCATCCATaGCGAGGTTCAGGTCGTGCA | + |
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Preference number: 4 (lower is better) Translates to: IWICRALARPGAARPPSRRADHP*RGSGRA Trigger: TGCACGACCTGAACCTCGCCATGGATGGTCTGCGCG...GCGGGAGGGTGGGCGCGCGGCCCCAGGCCTCGCCAGCGCCCTACAGATCCAGAT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR TCA 90 bp | CCGAGCAGTCTCCCTTTCCCTCCTGGCCCGGCACTGCGACCCCTGCCTCAGCTCCGTGAGCGTAGGGCATaGCCTCGCGCAGACCATCCA | + |
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Preference number: 4 (lower is better) Translates to: PSSLPFPPGPALRPLPQLRERRA*PRADHP Trigger: TGGATGGTCTGCGCGAGGTCATGCCCTACGCTCACG...GAGCTGAGGCAGGGGTCGCAGTGCCGGGCCAGGAGGGAAAGGGAGACTGCTCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CCA 90 bp | CCGAGCAGTCTCCCTTTCCCTCCTGGCCCGGCACTGCGACCCCTGCCTCAGCTCGGCGGTGGTGGCATCTaGCAGATGGTGCAGGGACAG | + |
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Preference number: 4 (lower is better) Translates to: PSSLPFPPGPALRPLPQLGGGGI*QMVQGQ Trigger: CTGTCCCTGCACCATCTGCCAGATGCCACCACCGCC...GAGCTGAGGCAGGGGTCGCAGTGCCGGGCCAGGAGGGAAAGGGAGACTGCTCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CCA 90 bp | CTTTCCCTCCTGGCCCGGCACTGCGACCCCTGCCTCAGCTCTCCCTTCCTCCTCCCCACAGTCCCACAGTaGAAGGCCGAGTGGTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LSLLARHCDPCLSSPFLLPTVPQ*KAEWCP Trigger: GGGACACCACTCGGCCTTCCACTGTGGGACTGTGGG...GAGGAGGAAGGGAGAGCTGAGGCAGGGGTCGCAGTGCCGGGCCAGGAGGGAAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CCA 90 bp | CTTTCCCTCCTGGCCCGGCACTGCGACCCCTGCCTCAGCTCTCCCTTCCTCCTCAAAGCCGGGCCATGTTaGCGGTGGAGAGAGCGGACA | + |
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Preference number: 4 (lower is better) Translates to: LSLLARHCDPCLSSPFLLKAGPC*RWRERT Trigger: TGTCCGCTCTCTCCACCGCCAACATGGCCCGGCTTT...GAGGAGGAAGGGAGAGCTGAGGCAGGGGTCGCAGTGCCGGGCCAGGAGGGAAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR GCA 90 bp | TACTGGCGTGGCATGAGGGAAAGAAGCATGCATGCAAAACAGGACTTCGGGTTCGTGCACAGCGTTGGCTaGGTGTGCCGGGTGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: YWRGMRERSMHAKQDFGFVHSVG*VCRVAG Trigger: GCCGGCCACCCGGCACACGCAGCCAACGCTGTGCAC...GAACCCGAAGTCCTGTTTTGCATGCATGCTTCTTTCCCTCATGCCACGCCAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR GCA 90 bp | CTTTCCCTCCTGGCCCGGCACTGCGACCCCTGCCTCAGCTCTCCCTTCCTCCTCTCCTGCTCCGACAGCTaGTTCTTGATTTTGTACTTG | + |
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Preference number: 4 (lower is better) Translates to: LSLLARHCDPCLSSPFLLSCSDS*FLILYL Trigger: CAAGTACAAAATCAAGAAGCAGCTGTCGGAGCAGGA...GAGGAGGAAGGGAGAGCTGAGGCAGGGGTCGCAGTGCCGGGCCAGGAGGGAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR GCA 90 bp | CATGAGGGAAAGAAGCATGCATGCAAAACAGGACTTCGGGTTCCAGTCCCCTTCGGGTGGCCGGCCGAATaGCCCACAGTCCCACAGTGG | + |
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Preference number: 4 (lower is better) Translates to: HEGKKHACKTGLRVPVPFGWPAE*PTVPQW Trigger: CCACTGTGGGACTGTGGGGCATTCGGCCGGCCACCC...GAAGGGGACTGGAACCCGAAGTCCTGTTTTGCATGCATGCTTCTTTCCCTCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR GCA 90 bp | CATGAGGGAAAGAAGCATGCATGCAAAACAGGACTTCGGGTTCCAGTCCCCTTCGAGGGGACGAGGCATTaGCAGAGGAGAGCGCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: HEGKKHACKTGLRVPVPFEGTRH*QRRARR Trigger: GCGGCGCGCTCTCCTCTGGCAATGCCTCGTCCCCTC...GAAGGGGACTGGAACCCGAAGTCCTGTTTTGCATGCATGCTTCTTTCCCTCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR TCA 90 bp | AACCGACCCAACCCCGCATGCAGTATAATTTGGCAAGGGGGTAGGATGAACTTCGGGCGCCTTGAGCAGTaGGTGGGGAGGACGGATGGT | + |
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Preference number: 4 (lower is better) Translates to: NRPNPACSIIWQGGRMNFGRLEQ*VGRTDG Trigger: ACCATCCGTCCTCCCCACTCACTGCTCAAGGCGCCC...GAAGTTCATCCTACCCCCTTGCCAAATTATACTGCATGCGGGGTTGGGTCGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR GCA 90 bp | AGGGAAAGAAGCATGCATGCAAAACAGGACTTCGGGTTCCAGTCCCCTTCGCTATGCAGCCTTGGCGCCTaGCCTCGAGAGGCTTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: RERSMHAKQDFGFQSPSLCSLGA*PREAFP Trigger: GGGGAAAGCCTCTCGAGGGCAGGCGCCAAGGCTGCA...TAGCGAAGGGGACTGGAACCCGAAGTCCTGTTTTGCATGCATGCTTCTTTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CCA 90 bp | AGGGAAAGAAGCATGCATGCAAAACAGGACTTCGGGTTCCAGTCCCCTTCGCTAGGGCCATGTTGGCGGTaGAGAGAGCGGACAGGTGCG | + |
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Preference number: 4 (lower is better) Translates to: RERSMHAKQDFGFQSPSLGPCWR*RERTGA Trigger: CGCACCTGTCCGCTCTCTCCACCGCCAACATGGCCC...TAGCGAAGGGGACTGGAACCCGAAGTCCTGTTTTGCATGCATGCTTCTTTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CCA 90 bp | AACCGACCCAACCCCGCATGCAGTATAATTTGGCAAGGGGGTAGGATGAACTTCGTGGCATCTGGCAGATaGTGCAGGGACAGGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: NRPNPACSIIWQGGRMNFVASGR*CRDRAA Trigger: GGCTGCCCTGTCCCTGCACCATCTGCCAGATGCCAC...GAAGTTCATCCTACCCCCTTGCCAAATTATACTGCATGCGGGGTTGGGTCGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CCA 90 bp | AGGGAAAGAAGCATGCATGCAAAACAGGACTTCGGGTTCCAGTCCCCTTCGCTACAGGTGCGGCGGTGGTaGCATCTGGCAGATGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: RERSMHAKQDFGFQSPSLQVRRW*HLADGA Trigger: TGCACCATCTGCCAGATGCCACCACCGCCGCACCTG...TAGCGAAGGGGACTGGAACCCGAAGTCCTGTTTTGCATGCATGCTTCTTTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR GCA 90 bp | AGGGAAAGAAGCATGCATGCAAAACAGGACTTCGGGTTCCAGTCCCCTTCGCTACTTGCTGCTTTCTCCTaGAGCCTTGGCGCCTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: RERSMHAKQDFGFQSPSLLAAFS*SLGACP Trigger: AGGGCAGGCGCCAAGGCTGCAGGAGAAAGCAGCAAG...TAGCGAAGGGGACTGGAACCCGAAGTCCTGTTTTGCATGCATGCTTCTTTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR GCA 90 bp | AGACATGGGCTTGGGGGAAGAATCACATGTTCATTGAGTGTGAATCTCTGTGCTGGCAGCCCCGCCCAGTaGTGGAAGCCGCTGCCCAAT | + |
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Preference number: 4 (lower is better) Translates to: RHGLGGRITCSLSVNLCAGSPAQ*WKPLPN Trigger: ATTGGGCAGCGGCTTCCAGCACTGGGCGGGGCTGCC...AGCACAGAGATTCACACTCAATGAACATGTGATTCTTCCCCCAAGCCCATGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR GCA 90 bp | AACCGACCCAACCCCGCATGCAGTATAATTTGGCAAGGGGGTAGGATGAACTTCGCGAGGTTCAGGTCGTaGATCCTCTTGCGTTCGCGT | + |
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Preference number: 4 (lower is better) Translates to: NRPNPACSIIWQGGRMNFARFRS*ILLRSR Trigger: ACGCGAACGCAAGAGGATGCACGACCTGAACCTCGC...GAAGTTCATCCTACCCCCTTGCCAAATTATACTGCATGCGGGGTTGGGTCGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CCA 90 bp | AGGGAAAGAAGCATGCATGCAAAACAGGACTTCGGGTTCCAGTCCCCTTCGCTATGGTGGTGGCGGTGGTaGTGGTCTCTTAGGTACATC | + |
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Preference number: 4 (lower is better) Translates to: RERSMHAKQDFGFQSPSLWWWRW*WSLRYI Trigger: GATGTACCTAAGAGACCACCACCACCGCCACCACCA...TAGCGAAGGGGACTGGAACCCGAAGTCCTGTTTTGCATGCATGCTTCTTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CCA 90 bp | AACCGACCCAACCCCGCATGCAGTATAATTTGGCAAGGGGGTAGGATGAACTTCTCCCCTGGCATCTTCTaGACCATATCGCCCTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: NRPNPACSIIWQGGRMNFSPGIF*TISPCV Trigger: CACACAGGGCGATATGGTCCAGAAGATGCCAGGGGA...GAAGTTCATCCTACCCCCTTGCCAAATTATACTGCATGCGGGGTTGGGTCGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CCA 90 bp | GGACAGAGACAGACATGGGCTTGGGGGAAGAATCACATGTTCATTGAGTGTGAAGCCTTGAGCAGTGAGTaGGGAGGACGGATGGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: GQRQTWAWGKNHMFIECEALSSE*GGRMVP Trigger: TGGCACCATCCGTCCTCCCCACTCACTGCTCAAGGC...TTCACACTCAATGAACATGTGATTCTTCCCCCAAGCCCATGTCTGTCTCTGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CCA 90 bp | AGACATGGGCTTGGGGGAAGAATCACATGTTCATTGAGTGTGAATCTCTGTGCTAGCCCCGCCCAGTGCTaGAAGCCGCTGCCCAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: RHGLGGRITCSLSVNLCASPAQC*KPLPNC Trigger: ACAATTGGGCAGCGGCTTCCAGCACTGGGCGGGGCT...AGCACAGAGATTCACACTCAATGAACATGTGATTCTTCCCCCAAGCCCATGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CCA 90 bp | AGACATGGGCTTGGGGGAAGAATCACATGTTCATTGAGTGTGAATCTCTGTGCTGGACAGGTGCGGCGGTaGTGGCATCTGGCAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RHGLGGRITCSLSVNLCAGQVRR*WHLADG Trigger: ACCATCTGCCAGATGCCACCACCGCCGCACCTGTCC...AGCACAGAGATTCACACTCAATGAACATGTGATTCTTCCCCCAAGCCCATGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR TCA 90 bp | ATGCATGCAAAACAGGACTTCGGGTTCCAGTCCCCTTCGCTAACACCTAGGTATATCCATGTCCGGAGATaGCGCTCTGCTGGAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: MHAKQDFGFQSPSLTPRYIHVRR*RSAGDR Trigger: TCTGTCTCCAGCAGAGCGTCATCTCCGGACATGGAT...ATACCTAGGTGTTAGCGAAGGGGACTGGAACCCGAAGTCCTGTTTTGCATGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR TCA 90 bp | AGAGACAGACATGGGCTTGGGGGAAGAATCACATGTTCATTGAGTGTGAATCTCTTCAGACGACTCTCCTaGTGGTGGTGGTGGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RDRHGLGGRITCSLSVNLFRRLS*WWWWWR Trigger: CCGCCACCACCACCACCATCAGGAGAGTCGTCTGAA...GAGATTCACACTCAATGAACATGTGATTCTTCCCCCAAGCCCATGTCTGTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR GCA 90 bp | ATGCATGCAAAACAGGACTTCGGGTTCCAGTCCCCTTCGCTAACACCTAGGTATCCGGAGATGACGCTCTaGTGGAGACAGAGCTCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: MHAKQDFGFQSPSLTPRYPEMTL*WRQSSN Trigger: ATTCGAGCTCTGTCTCCAGCAGAGCGTCATCTCCGG...ATACCTAGGTGTTAGCGAAGGGGACTGGAACCCGAAGTCCTGTTTTGCATGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR GCA 90 bp | GAGAATCAAAACTTGGATTCTGAAACAAGCTCTCTCTCTCTCTCTCTCTCTCTCCCGCCCAGGATAGGGTaGACCGGGTGCACAGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ENQNLDSETSSLSLSLSLPPRIG*TGCTAL Trigger: CAACGCTGTGCACCCGGTGCACCCTATCCTGGGCGG...GAGAGAGAGAGAGAGAGAGAGAGAGCTTGTTTCAGAATCCAAGTTTTGATTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR GCA 90 bp | TCCTTGTTACAAGGAAAATGGCGCTATAGCCCGCACAACATGTTTAGACAAGATATAGGGTGCACCGGGTaGACAGCGTTGGCTGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLQGKWRYSPHNMFRQDIGCTG*TALAAC Trigger: ACACGCAGCCAACGCTGTGCACCCGGTGCACCCTAT...ATCTTGTCTAAACATGTTGTGCGGGCTATAGCGCCATTTTCCTTGTAACAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR TCA 90 bp | CATTTTATACAACCACAGACAGATATATGGAGTACTTTGGAGAGCTCACTAATAGCGTGGAGGGCGCCTTaGGCAGTGAGTGGGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HFIQPQTDIWSTLESSLIAWRAP*AVSGED Trigger: GTCCTCCCCACTCACTGCTCAAGGCGCCCTCCACGC...TATTAGTGAGCTCTCCAAAGTACTCCATATATCTGTCTGTGGTTGTATAAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CCA 90 bp | AGAGACAGACATGGGCTTGGGGGAAGAATCACATGTTCATTGAGTGTGAATCTCGAGATGACGCTCTGCTaGAGACAGAGCTCGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RDRHGLGGRITCSLSVNLEMTLC*RQSSNQ Trigger: CTGATTCGAGCTCTGTCTCCAGCAGAGCGTCATCTC...GAGATTCACACTCAATGAACATGTGATTCTTCCCCCAAGCCCATGTCTGTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CCA 90 bp | AGAGACAGACATGGGCTTGGGGGAAGAATCACATGTTCATTGAGTGTGAATCTCCGAGAGGCTTTCCCCTaGCATCTTCTGGACCATATC | + |
|
Preference number: 4 (lower is better) Translates to: RDRHGLGGRITCSLSVNLREAFP*HLLDHI Trigger: GATATGGTCCAGAAGATGCCAGGGGAAAGCCTCTCG...GAGATTCACACTCAATGAACATGTGATTCTTCCCCCAAGCCCATGTCTGTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR TCA 90 bp | AAGAACACAGCCAGAAAGAGCCAACTCCAAAGTTCCTTTGCAAGTTTTAAACTCTGCGTTCGCGTCCGTTaGTCTTCAGCCGCAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KNTARKSQLQSSFASFKLCVRVR*SSAATA Trigger: AGCAGTTGCGGCTGAAGATCAACGGACGCGAACGCA...GAGTTTAAAACTTGCAAAGGAACTTTGGAGTTGGCTCTTTCTGGCTGTGTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR GCA 90 bp | CATTTTATACAACCACAGACAGATATATGGAGTACTTTGGAGAGCTCACTAATAGAGAGAGCGGACAGGTaGGGCGGTGGTGGCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HFIQPQTDIWSTLESSLIERADR*GGGGIW Trigger: CCAGATGCCACCACCGCCGCACCTGTCCGCTCTCTC...TATTAGTGAGCTCTCCAAAGTACTCCATATATCTGTCTGTGGTTGTATAAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CCA 90 bp | GAGAATCAAAACTTGGATTCTGAAACAAGCTCTCTCTCTCTCTCTCTCTCTCTCCCATATCGCCCTGTGTaGAGGAGACCGAGTTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ENQNLDSETSSLSLSLSLPYRPV*RRPSSD Trigger: GTCTGAACTCGGTCTCCTCCACACAGGGCGATATGG...GAGAGAGAGAGAGAGAGAGAGAGAGCTTGTTTCAGAATCCAAGTTTTGATTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR TCA 90 bp | AGACATGGGCTTGGGGGAAGAATCACATGTTCATTGAGTGTGAATCTCTGTGCTCCGACAGCTGCTTCTTaGTTTTGTACTTGCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RHGLGGRITCSLSVNLCAPTAAS*FCTCCF Trigger: AAAGCAGCAAGTACAAAATCAAGAAGCAGCTGTCGG...AGCACAGAGATTCACACTCAATGAACATGTGATTCTTCCCCCAAGCCCATGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR TCA 90 bp | AGGGCAGAGACAATCATAAGTGTATCTAGCTCGATGAAATATTTACATTTGCTTTTCAGCCGCAACTGCTaGAGATCCTGCTCCGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RAETIISVSSSMKYLHLLFSRNC*RSCSDS Trigger: GCTGTCGGAGCAGGATCTTCAGCAGTTGCGGCTGAA...AAGCAAATGTAAATATTTCATCGAGCTAGATACACTTATGATTGTCTCTGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR CAA 72 bp | TATATGGAGTACTTTGGAGAGCTCACTAATAAATCCTaGTTACAAGGAAAATGGCGCTATAGCCCGCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: YMEYFGELTNKS*LQGKWRYSPHN Trigger: GTTGTGCGGGCTATAGCGCCATTTTCCTTGTAACAAGGATTTATTAGTGAGCTCTCCAAAGTACTCCATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| 3UTR CAA 72 bp | CATTTTATACAACCACAGACAGATATATGGAGTACTTaGGAGAGCTCACTAATAAATCCTTGTTACAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HFIQPQTDIWST*ESSLINPCYKE Trigger: TTCCTTGTAACAAGGATTTATTAGTGAGCTCTCCAAAGTACTCCATATATCTGTCTGTGGTTGTATAAAATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS GCA 90 bp | GGGGACGAGGCATTGCCAGAGGAGAGCGCGCCGCCCAGGATAGGGTaGACCGGGTGCACAGCGTTGGCTGCGTGTGCCGGGTGGCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GDEALPEESAPPRIG*TGCTALAACAGWPA Trigger: GGCCGGCCACCCGGCACACGCAGCCAACGCTGTGCACCCGGTGCACCCTATCCTGGGCGGCGCGCTCTCCTCTGGCAATGCCTCGTCCCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS GCA 90 bp | GAGCGCGCCGCCCAGGATAGGGTGCACCGGGTGCACAGCGTTGGCTaGGTGTGCCGGGTGGCCGGCCGAATGCCCCACAGTCCCACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ERAAQDRVHRVHSVG*VCRVAGRMPHSPTV Trigger: CACTGTGGGACTGTGGGGCATTCGGCCGGCCACCCGGCACACGCAGCCAACGCTGTGCACCCGGTGCACCCTATCCTGGGCGGCGCGCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS GCA 90 bp | GCATTGCCAGAGGAGAGCGCGCCGCCCAGGATAGGGTGCACCGGGTaGACAGCGTTGGCTGCGTGTGCCGGGTGGCCGGCCGAATGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ALPEESAPPRIGCTG*TALAACAGWPAECP Trigger: GGGGCATTCGGCCGGCCACCCGGCACACGCAGCCAACGCTGTGCACCCGGTGCACCCTATCCTGGGCGGCGCGCTCTCCTCTGGCAATGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS GCA 90 bp | GCCGCCCAGGATAGGGTGCACCGGGTGCACAGCGTTGGCTGCGTGTaGCGGGTGGCCGGCCGAATGCCCCACAGTCCCACAGTGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AAQDRVHRVHSVGCV*RVAGRMPHSPTVEG Trigger: GCCTTCCACTGTGGGACTGTGGGGCATTCGGCCGGCCACCCGGCACACGCAGCCAACGCTGTGCACCCGGTGCACCCTATCCTGGGCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS GCA 90 bp | GGTGGCATCTGGCAGATGGTGCAGGGACAGGGCAGCCCCGCCCAGTaGTGGAAGCCGCTGCCCAATTGTAGCGCGGGCGGCGTGGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GGIWQMVQGQGSPAQ*WKPLPNCSAGGVEG Trigger: GCCCTCCACGCCGCCCGCGCTACAATTGGGCAGCGGCTTCCAGCACTGGGCGGGGCTGCCCTGTCCCTGCACCATCTGCCAGATGCCACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CAA 90 bp | CCGAGCAGTCTCCCTTTCCCTCCTGGCCCGGCACTGCGACCCCTGCCTCAGCTCACCGGGTGCACAGCGTaGGCTGCGTGTGCCGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSSLPFPPGPALRPLPQLTGCTA*AACAGW Trigger: CCACCCGGCACACGCAGCCAACGCTGTGCACCCGGT...GAGCTGAGGCAGGGGTCGCAGTGCCGGGCCAGGAGGGAAAGGGAGACTGCTCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS CCA 90 bp | AAGCCGGGCCATGTTGGCGGTGGAGAGAGCGGACAGGTGCGGCGGTaGTGGCATCTGGCAGATGGTGCAGGGACAGGGCAGCCCCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KPGHVGGGESGQVRR*WHLADGAGTGQPRP Trigger: TGGGCGGGGCTGCCCTGTCCCTGCACCATCTGCCAGATGCCACCACCGCCGCACCTGTCCGCTCTCTCCACCGCCAACATGGCCCGGCTT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS TCA 90 bp | GGAAGCCGCTGCCCAATTGTAGCGCGGGCGGCGTGGAGGGCGCCTTaGGCAGTGAGTGGGGAGGACGGATGGTGCCAATGGTCGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSRCPIVARAAWRAP*AVSGEDGWCQWSAG Trigger: CCCTGCCGACCATTGGCACCATCCGTCCTCCCCACTCACTGCTCAAGGCGCCCTCCACGCCGCCCGCGCTACAATTGGGCAGCGGCTTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS CCA 90 bp | AGGATAGGGTGCACCGGGTGCACAGCGTTGGCTGCGTGTGCCGGGTaGCCGGCCGAATGCCCCACAGTCCCACAGTGGAAGGCCGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RIGCTGCTALAACAG*PAECPTVPQWKAEW Trigger: CCACTCGGCCTTCCACTGTGGGACTGTGGGGCATTCGGCCGGCCACCCGGCACACGCAGCCAACGCTGTGCACCCGGTGCACCCTATCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS CCA 90 bp | CCCAATTGTAGCGCGGGCGGCGTGGAGGGCGCCTTGAGCAGTGAGTaGGGAGGACGGATGGTGCCAATGGTCGGCAGGGAGGTCGCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PNCSAGGVEGALSSE*GGRMVPMVGREVAD Trigger: GTCCGCGACCTCCCTGCCGACCATTGGCACCATCCGTCCTCCCCACTCACTGCTCAAGGCGCCCTCCACGCCGCCCGCGCTACAATTGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CAA 90 bp | CTTTCCCTCCTGGCCCGGCACTGCGACCCCTGCCTCAGCTCTCCCTTCCTCCTCGGCGTGGAGGGCGCCTaGAGCAGTGAGTGGGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSLLARHCDPCLSSPFLLGVEGA*SSEWGG Trigger: TCCTCCCCACTCACTGCTCAAGGCGCCCTCCACGCC...GAGGAGGAAGGGAGAGCTGAGGCAGGGGTCGCAGTGCCGGGCCAGGAGGGAAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS GCA 90 bp | TCAGCCGAAAGCCGGGCCATGTTGGCGGTGGAGAGAGCGGACAGGTaGGGCGGTGGTGGCATCTGGCAGATGGTGCAGGGACAGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SAESRAMLAVERADR*GGGGIWQMVQGQGS Trigger: GCTGCCCTGTCCCTGCACCATCTGCCAGATGCCACCACCGCCGCACCTGTCCGCTCTCTCCACCGCCAACATGGCCCGGCTTTCGGCTGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS CCA 90 bp | GCTTTCTCCTGCAGCCTTGGCGCCTGCCCTCGAGAGGCTTTCCCCTaGCATCTTCTGGACCATATCGCCCTGTGTGGAGGAGACCGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: AFSCSLGACPREAFP*HLLDHIALCGGDRV Trigger: AACTCGGTCTCCTCCACACAGGGCGATATGGTCCAGAAGATGCCAGGGGAAAGCCTCTCGAGGGCAGGCGCCAAGGCTGCAGGAGAAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS CCA 90 bp | TCGAGAGGCTTTCCCCTGGCATCTTCTGGACCATATCGCCCTGTGTaGAGGAGACCGAGTTCAGACGACTCTCCTGATGGTGGTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SRGFPLASSGPYRPV*RRPSSDDSPDGGGG Trigger: ACCACCACCACCATCAGGAGAGTCGTCTGAACTCGGTCTCCTCCACACAGGGCGATATGGTCCAGAAGATGCCAGGGGAAAGCCTCTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS GCA 90 bp | CTGCTCCGACAGCTGCTTCTTGATTTTGTACTTGCTGCTTTCTCCTaGAGCCTTGGCGCCTGCCCTCGAGAGGCTTTCCCCTGGCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLRQLLLDFVLAAFS*SLGACPREAFPWHL Trigger: AAGATGCCAGGGGAAAGCCTCTCGAGGGCAGGCGCCAAGGCTGCAGGAGAAAGCAGCAAGTACAAAATCAAGAAGCAGCTGTCGGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CAA 90 bp | GGACAGAGACAGACATGGGCTTGGGGGAAGAATCACATGTTCATTGAGTGTGAAGAAAGCCGGGCCATGTaGGCGGTGGAGAGAGCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GQRQTWAWGKNHMFIECEESRAM*AVERAD Trigger: GTCCGCTCTCTCCACCGCCAACATGGCCCGGCTTTC...TTCACACTCAATGAACATGTGATTCTTCCCCCAAGCCCATGTCTGTCTCTGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS TCA 90 bp | TGCATCCTCTTGCGTTCGCGTCCGTTGATCTTCAGCCGCAACTGCTaGAGATCCTGCTCCGACAGCTGCTTCTTGATTTTGTACTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CILLRSRPLIFSRNC*RSCSDSCFLILYLL Trigger: CAGCAAGTACAAAATCAAGAAGCAGCTGTCGGAGCAGGATCTTCAGCAGTTGCGGCTGAAGATCAACGGACGCGAACGCAAGAGGATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CAA 90 bp | AGAGACAGACATGGGCTTGGGGGAAGAATCACATGTTCATTGAGTGTGAATCTCCACTTGAGCAAGTCCTaGGATTCAGCCGAAAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RDRHGLGGRITCSLSVNLHLSKS*DSAESR Trigger: CCGGCTTTCGGCTGAATCCAAGGACTTGCTCAAGTG...GAGATTCACACTCAATGAACATGTGATTCTTCCCCCAAGCCCATGTCTGTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CAA 90 bp | GAGAATCAAAACTTGGATTCTGAAACAAGCTCTCTCTCTCTCTCTCTCTCTCTCTTGCGTTCGCGTCCGTaGATCTTCAGCCGCAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: ENQNLDSETSSLSLSLSLLRSRP*IFSRNC Trigger: GCAGTTGCGGCTGAAGATCAACGGACGCGAACGCAA...GAGAGAGAGAGAGAGAGAGAGAGAGCTTGTTTCAGAATCCAAGTTTTGATTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS-3UTR CAA 90 bp | AGGGAAAGAAGCATGCATGCAAAACAGGACTTCGGGTTCCAGTCCCCTTCGCTAAGCTGCTTCTTGATTTaGTACTTGCTGCTTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RERSMHAKQDFGFQSPSLSCFLI*YLLLSP Trigger: AGGAGAAAGCAGCAAGTACAAAATCAAGAAGCAGCT...TAGCGAAGGGGACTGGAACCCGAAGTCCTGTTTTGCATGCATGCTTCTTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS GCA 72 bp | GAGGAGAGCGCGCCGCCCAGGATAGGGTGCACCGGGTaGACAGCGTTGGCTGCGTGTGCCGGGTGGCCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: EESAPPRIGCTG*TALAACAGWPA Trigger: GGCCGGCCACCCGGCACACGCAGCCAACGCTGTGCACCCGGTGCACCCTATCCTGGGCGGCGCGCTCTCCTC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS CAA 72 bp | GCGCCGCCCAGGATAGGGTGCACCGGGTGCACAGCGTaGGCTGCGTGTGCCGGGTGGCCGGCCGAATGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: APPRIGCTGCTA*AACAGWPAECP Trigger: GGGGCATTCGGCCGGCCACCCGGCACACGCAGCCAACGCTGTGCACCCGGTGCACCCTATCCTGGGCGGCGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS CAA 90 bp | GAGGAGAGCGCGCCGCCCAGGATAGGGTGCACCGGGTGCACAGCGTaGGCTGCGTGTGCCGGGTGGCCGGCCGAATGCCCCACAGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: EESAPPRIGCTGCTA*AACAGWPAECPTVP Trigger: TGGGACTGTGGGGCATTCGGCCGGCCACCCGGCACACGCAGCCAACGCTGTGCACCCGGTGCACCCTATCCTGGGCGGCGCGCTCTCCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS GCA 72 bp | GCCCAGGATAGGGTGCACCGGGTGCACAGCGTTGGCTaGGTGTGCCGGGTGGCCGGCCGAATGCCCCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: AQDRVHRVHSVG*VCRVAGRMPHS Trigger: ACTGTGGGGCATTCGGCCGGCCACCCGGCACACGCAGCCAACGCTGTGCACCCGGTGCACCCTATCCTGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS GCA 72 bp | GCATTGCCAGAGGAGAGCGCGCCGCCCAGGATAGGGTaGACCGGGTGCACAGCGTTGGCTGCGTGTGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: ALPEESAPPRIG*TGCTALAACAG Trigger: CCCGGCACACGCAGCCAACGCTGTGCACCCGGTGCACCCTATCCTGGGCGGCGCGCTCTCCTCTGGCAATGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS GCA 72 bp | TGGCAGATGGTGCAGGGACAGGGCAGCCCCGCCCAGTaGTGGAAGCCGCTGCCCAATTGTAGCGCGGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: WQMVQGQGSPAQ*WKPLPNCSAGG Trigger: GCCGCCCGCGCTACAATTGGGCAGCGGCTTCCAGCACTGGGCGGGGCTGCCCTGTCCCTGCACCATCTGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS CCA 72 bp | AGCGCGGGCGGCGTGGAGGGCGCCTTGAGCAGTGAGTaGGGAGGACGGATGGTGCCAATGGTCGGCAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SAGGVEGALSSE*GGRMVPMVGRE Trigger: CTCCCTGCCGACCATTGGCACCATCCGTCCTCCCCACTCACTGCTCAAGGCGCCCTCCACGCCGCCCGCGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS CCA 72 bp | GTGGAGAGAGCGGACAGGTGCGGCGGTGGTGGCATCTaGCAGATGGTGCAGGGACAGGGCAGCCCCGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VERADRCGGGGI*QMVQGQGSPAQ Trigger: CTGGGCGGGGCTGCCCTGTCCCTGCACCATCTGCCAGATGCCACCACCGCCGCACCTGTCCGCTCTCTCCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS CAA 90 bp | GTGCCAATGGTCGGCAGGGAGGTCGCGGACAGAGGGGACGAGGCATaGCCAGAGGAGAGCGCGCCGCCCAGGATAGGGTGCACCGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: VPMVGREVADRGDEA*PEESAPPRIGCTGC Trigger: GCACCCGGTGCACCCTATCCTGGGCGGCGCGCTCTCCTCTGGCAATGCCTCGTCCCCTCTGTCCGCGACCTCCCTGCCGACCATTGGCAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS GCA 72 bp | GATAGGGTGCACCGGGTGCACAGCGTTGGCTGCGTGTaGCGGGTGGCCGGCCGAATGCCCCACAGTCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: DRVHRVHSVGCV*RVAGRMPHSPT Trigger: TGTGGGACTGTGGGGCATTCGGCCGGCCACCCGGCACACGCAGCCAACGCTGTGCACCCGGTGCACCCTATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS CAA 90 bp | TGGAAGCCGCTGCCCAATTGTAGCGCGGGCGGCGTGGAGGGCGCCTaGAGCAGTGAGTGGGGAGGACGGATGGTGCCAATGGTCGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: WKPLPNCSAGGVEGA*SSEWGGRMVPMVGR Trigger: CCTGCCGACCATTGGCACCATCCGTCCTCCCCACTCACTGCTCAAGGCGCCCTCCACGCCGCCCGCGCTACAATTGGGCAGCGGCTTCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS GCA 72 bp | ACAGCGTTGGCTGCGTGTGCCGGGTGGCCGGCCGAATaGCCCACAGTCCCACAGTGGAAGGCCGAGTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: TALAACAGWPAE*PTVPQWKAEWC Trigger: ACACCACTCGGCCTTCCACTGTGGGACTGTGGGGCATTCGGCCGGCCACCCGGCACACGCAGCCAACGCTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS GCA 72 bp | AGCCGGGCCATGTTGGCGGTGGAGAGAGCGGACAGGTaGGGCGGTGGTGGCATCTGGCAGATGGTGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: SRAMLAVERADR*GGGGIWQMVQG Trigger: TCCCTGCACCATCTGCCAGATGCCACCACCGCCGCACCTGTCCGCTCTCTCCACCGCCAACATGGCCCGGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS TCA 72 bp | TGCCCAATTGTAGCGCGGGCGGCGTGGAGGGCGCCTTaGGCAGTGAGTGGGGAGGACGGATGGTGCCAATGG | + |
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Preference number: 6 (lower is better) Translates to: CPIVARAAWRAP*AVSGEDGWCQW Trigger: CCATTGGCACCATCCGTCCTCCCCACTCACTGCTCAAGGCGCCCTCCACGCCGCCCGCGCTACAATTGGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS CCA 72 bp | CCTTGGATTCAGCCGAAAGCCGGGCCATGTTGGCGGTaGAGAGAGCGGACAGGTGCGGCGGTGGTGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: PWIQPKAGPCWR*RERTGAAVVAS Trigger: AGATGCCACCACCGCCGCACCTGTCCGCTCTCTCCACCGCCAACATGGCCCGGCTTTCGGCTGAATCCAAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS CCA 72 bp | GCAAGTCCTTGGATTCAGCCGAAAGCCGGGCCATGTTaGCGGTGGAGAGAGCGGACAGGTGCGGCGGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: ASPWIQPKAGPC*RWRERTGAAVV Trigger: CACCACCGCCGCACCTGTCCGCTCTCTCCACCGCCAACATGGCCCGGCTTTCGGCTGAATCCAAGGACTTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS CAA 72 bp | AGCAAGTCCTTGGATTCAGCCGAAAGCCGGGCCATGTaGGCGGTGGAGAGAGCGGACAGGTGCGGCGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: SKSLDSAESRAM*AVERADRCGGG Trigger: ACCACCGCCGCACCTGTCCGCTCTCTCCACCGCCAACATGGCCCGGCTTTCGGCTGAATCCAAGGACTTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS CCA 72 bp | GCGCCTGCCCTCGAGAGGCTTTCCCCTGGCATCTTCTaGACCATATCGCCCTGTGTGGAGGAGACCGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: APALERLSPGIF*TISPCVEETEF Trigger: GAACTCGGTCTCCTCCACACAGGGCGATATGGTCCAGAAGATGCCAGGGGAAAGCCTCTCGAGGGCAGGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS CCA 72 bp | TGCAGCCTTGGCGCCTGCCCTCGAGAGGCTTTCCCCTaGCATCTTCTGGACCATATCGCCCTGTGTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: CSLGACPREAFP*HLLDHIALCGG Trigger: TCCTCCACACAGGGCGATATGGTCCAGAAGATGCCAGGGGAAAGCCTCTCGAGGGCAGGCGCCAAGGCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS GCA 72 bp | TTTGTACTTGCTGCTTTCTCCTGCAGCCTTGGCGCCTaGCCTCGAGAGGCTTTCCCCTGGCATCTTCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: FVLAAFSCSLGA*PREAFPWHLLD Trigger: GTCCAGAAGATGCCAGGGGAAAGCCTCTCGAGGGCAGGCGCCAAGGCTGCAGGAGAAAGCAGCAAGTACAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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| CDS TCA 72 bp | TTGCGTTCGCGTCCGTTGATCTTCAGCCGCAACTGCTaGAGATCCTGCTCCGACAGCTGCTTCTTGATTTTG | + |
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Preference number: 6 (lower is better) Translates to: LRSRPLIFSRNC*RSCSDSCFLIL Trigger: CAAAATCAAGAAGCAGCTGTCGGAGCAGGATCTTCAGCAGTTGCGGCTGAAGATCAACGGACGCGAACGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053225.7 |
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