Pregenerated sensors for OLFR998 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000111454Ensembl transcript IDs: ENSMUST00000052307.5, ENSMUST00000215083.3
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCCAATCATGTCACAGAAGAATGACAGAGGCATTTCAGATAAACTaGATAGAGACAGACACATGCTCCTTCATCAGTCTCTCATCCACC | + |
|
Preference number: 1 (lower is better) Translates to: CQSCHRRMTEAFQIN*IETDTCSFISLSST Trigger: GGTGGATGAGAGACTGATGAAGGAGCATGTGTCTGTCTCTATGCAGTTTATCTGAAATGCCTCTGTCATTCTTCTGTGACATGATTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215083.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTCCCAGCACACCTCTACATAATTGTACAATGCCAATCATGTCACAGAAGAAAATATACTTATGCATaGATATGGAAGGCAGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: MFPAHLYIIVQCQSCHRRKYTYA*IWKAGH Trigger: GTGCCCTGCCTTCCATATCAATGCATAAGTATATTT...TCTTCTGTGACATGATTGGCATTGTACAATTATGTAGAGGTGTGCTGGGAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215083.3 |
||
| CDS-3UTR TCA 90 bp | ATAGAGACAGACACATGCTCCTTCATCAGTCTCTCATCCACCCCAGTGTCCTCTGTGCTGCACAGCCCATaGAAGAGATCCTTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IETDTCSFISLSSTPVSSVLHSP*KRSFSP Trigger: AGGAGAAAAGGATCTCTTTCATGGGCTGTGCAGCAC...AGAGGACACTGGGGTGGATGAGAGACTGATGAAGGAGCATGTGTCTGTCTCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215083.3 |
||
| CDS-3UTR CCA 90 bp | AGACAGACACATGCTCCTTCATCAGTCTCTCATCCACCCCAGTGTCCTCTTAAAGTGTCCCATACAGAATaGAGACAGCTGACAAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RQTHAPSSVSHPPQCPLKVSHTE*RQLTSE Trigger: CTCACTTGTCAGCTGTCTCCATTCTGTATGGGACAC...TTTAAGAGGACACTGGGGTGGATGAGAGACTGATGAAGGAGCATGTGTCTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215083.3 |
||
| CDS-3UTR GCA 90 bp | GACAGACACATGCTCCTTCATCAGTCTCTCATCCACCCCAGTGTCCTCTTAAAAAAAGAACCACATCTGTaGTGCACAGCCCATGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DRHMLLHQSLIHPSVLLKKEPHL*CTAHER Trigger: TCTTTCATGGGCTGTGCAGCACAGATGTGGTTCTTT...TTTTAAGAGGACACTGGGGTGGATGAGAGACTGATGAAGGAGCATGTGTCTGTC 47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000215083.3 |
||
| CDS-3UTR GCA 90 bp | AGACAGACACATGCTCCTTCATCAGTCTCTCATCCACCCCAGTGTCCTCTTAAATATACAGTAAGGGCTTaGAAATGGCTGTGTACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RQTHAPSSVSHPPQCPLKYTVRA*KWLCTD Trigger: ATCGGTACACAGCCATTTGCAAGCCCTTACTGTATA...TTTAAGAGGACACTGGGGTGGATGAGAGACTGATGAAGGAGCATGTGTCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215083.3 |
||
| CDS-3UTR TCA 90 bp | ATAGAGACAGACACATGCTCCTTCATCAGTCTCTCATCCACCCCAGTGTCCTCTCAGCAGTTTGAATCTTaGAAATTGTCATCAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: IETDTCSFISLSSTPVSSQQFES*KLSSRC Trigger: GCATCTTGATGACAATTTTCAAGATTCAAACTGCTG...AGAGGACACTGGGGTGGATGAGAGACTGATGAAGGAGCATGTGTCTGTCTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215083.3 |
||
| CDS-3UTR TCA 90 bp | ATAGAGACAGACACATGCTCCTTCATCAGTCTCTCATCCACCCCAGTGTCCTCTTTCCCATCAGCAGTTTaGATCTTGAAAATTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: IETDTCSFISLSSTPVSSFPSAV*ILKIVI Trigger: GATGACAATTTTCAAGATTCAAACTGCTGATGGGAA...AGAGGACACTGGGGTGGATGAGAGACTGATGAAGGAGCATGTGTCTGTCTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215083.3 |
||
| CDS-3UTR GCA 90 bp | AGACAGACACATGCTCCTTCATCAGTCTCTCATCCACCCCAGTGTCCTCTTAAAGATCCTTTTCTCCTCTaGAAAGATATCACAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RQTHAPSSVSHPPQCPLKDPFLL*KDITEH Trigger: ATGCTCTGTGATATCTTTGCAGAGGAGAAAAGGATC...TTTAAGAGGACACTGGGGTGGATGAGAGACTGATGAAGGAGCATGTGTCTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215083.3 |
||
| CDS-3UTR GCA 90 bp | GACAGACACATGCTCCTTCATCAGTCTCTCATCCACCCCAGTGTCCTCTTAAAAGGAAAATGTTTCTTTTaGACCTTTCTCCTGAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: DRHMLLHQSLIHPSVLLKGKCFF*TFLLNA Trigger: TGCATTCAGGAGAAAGGTGCAAAAGAAACATTTTCC...TTTTAAGAGGACACTGGGGTGGATGAGAGACTGATGAAGGAGCATGTGTCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000215083.3 |
||
| CDS-3UTR TCA 90 bp | ATGTTCCCAGCACACCTCTACATAATTGTACAATGCCAATCATGTCACAGAAGATTTGCACCTTTCTCCTaGATGCACCTTTCACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MFPAHLYIIVQCQSCHRRFAPFS*MHLSLL Trigger: AAGAAGTGAAAGGTGCATTCAGGAGAAAGGTGCAAA...TCTTCTGTGACATGATTGGCATTGTACAATTATGTAGAGGTGTGCTGGGAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215083.3 |
||
| CDS-3UTR GCA 90 bp | ACACATGCTCCTTCATCAGTCTCTCATCCACCCCAGTGTCCTCTTAAAAATATAGATCGTGATGAAAAGTaGAATCTTCTGATAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: THAPSSVSHPPQCPLKNIDRDEK*NLLIEM Trigger: CATCTCTATCAGAAGATTGCACTTTTCATCACGATC...TATATTTTTAAGAGGACACTGGGGTGGATGAGAGACTGATGAAGGAGCATGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215083.3 |
||
| CDS-3UTR CAA 90 bp | ATAGAGACAGACACATGCTCCTTCATCAGTCTCTCATCCACCCCAGTGTCCTCTGTATACAGTAAGGGCTaGCAAATGGCTGTGTACCGA | + |
|
Preference number: 5 (lower is better) Translates to: IETDTCSFISLSSTPVSSVYSKG*QMAVYR Trigger: TCGGTACACAGCCATTTGCAAGCCCTTACTGTATAC...AGAGGACACTGGGGTGGATGAGAGACTGATGAAGGAGCATGTGTCTGTCTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215083.3 |
||
| CDS TCA 90 bp | ATAGCAAAGACATATGGCCCTACAACCAGATGCACACATACCCTCTaGGACATAAGGAGAGTATACAGTAAGGGCTTGCAAATGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: IAKTYGPTTRCTHTL*DIRRVYSKGLQMAV Trigger: CACAGCCATTTGCAAGCCCTTACTGTATACTCTCCTTATGTCTCAGAGGGTATGTGTGCATCTGGTTGTAGGGCCATATGTCTTTGCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052307.5 ENSMUST00000215083.3 |
||
| CDS TCA 90 bp | ATGGTATTTGAACCACAGAACGGTAAGCAAAAAGCCAAGGTTGTATaGGTTGTGATGTTTATAATAGCAAAGACATATGGCCCTACAACC | + |
|
Preference number: 5 (lower is better) Translates to: MVFEPQNGKQKAKVV*VVMFIIAKTYGPTT Trigger: GGTTGTAGGGCCATATGTCTTTGCTATTATAAACATCACAACTCATACAACCTTGGCTTTTTGCTTACCGTTCTGTGGTTCAAATACCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052307.5 ENSMUST00000215083.3 |
||
| CDS-3UTR CAA 90 bp | CTCATCCACCCCAGTGTCCTCTTAAAAATATACTTATGCATTGATATGGAAGGCTGTTTAAGGAAAAACTaGCACTGGGTCGAACATAAA | + |
|
Preference number: 5 (lower is better) Translates to: LIHPSVLLKIYLCIDMEGCLRKN*HWVEHK Trigger: TTTATGTTCGACCCAGTGCAAGTTTTTCCTTAAACA...GCCTTCCATATCAATGCATAAGTATATTTTTAAGAGGACACTGGGGTGGATGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000215083.3 |
||
| CDS TCA 72 bp | GAACCACAGAACGGTAAGCAAAAAGCCAAGGTTGTATaGGTTGTGATGTTTATAATAGCAAAGACATATGGC | + |
|
Preference number: 6 (lower is better) Translates to: EPQNGKQKAKVV*VVMFIIAKTYG Trigger: GCCATATGTCTTTGCTATTATAAACATCACAACTCATACAACCTTGGCTTTTTGCTTACCGTTCTGTGGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052307.5 ENSMUST00000215083.3 |
||