Pregenerated sensors for OLFR996 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000111179

Ensembl transcript IDs: ENSMUST00000077075.5

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 72 bp	TCCCTTGCAGCCTCTTGTTCTCACTCTAGTGGTCTTTaGCTTATATTTTGCTCTCACAACATAGATATGTCA	+
Preference number: 3 (lower is better) Translates to: SLAASCSHSSGL*LIFCSHNIDMS Trigger: TGACATATCTATGTTGTGAGAGCAAAATATAAGGCAAAGACCACTAGAGTGAGAACAAGAGGCTGCAAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077075.5
CDS-3UTR TCA 90 bp	CCCTTGCAGCCTCTTGTTCTCACTCTAGTGGTCTTTGCCTTATATTTTGCTCTCGAGACAGTTGCCAAGTaGGAGGAACAAGTTGAGAAG	+
Preference number: 4 (lower is better) Translates to: PLQPLVLTLVVFALYFALETVAK*EEQVEK Trigger: CTTCTCAACTTGTTCCTCTCACTTGGCAACTGTCTC...GAGAGCAAAATATAAGGCAAAGACCACTAGAGTGAGAACAAGAGGCTGCAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077075.5
CDS-3UTR TCA 90 bp	CCCTTGCAGCCTCTTGTTCTCACTCTAGTGGTCTTTGCCTTATATTTTGCTCTCCTCCCATTGGCTGTCTaGATCTTCAAAATTGCCTTC	+
Preference number: 4 (lower is better) Translates to: PLQPLVLTLVVFALYFALLPLAV*IFKIAF Trigger: GAAGGCAATTTTGAAGATTCAGACAGCCAATGGGAG...GAGAGCAAAATATAAGGCAAAGACCACTAGAGTGAGAACAAGAGGCTGCAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077075.5
CDS-3UTR GCA 90 bp	CCCTTGCAGCCTCTTGTTCTCACTCTAGTGGTCTTTGCCTTATATTTTGCTCTCAAAGAACCACATCTGTaGTGCACAGCCCACAAAAGA	+
Preference number: 4 (lower is better) Translates to: PLQPLVLTLVVFALYFALKEPHL*CTAHKR Trigger: TCTTTTGTGGGCTGTGCAGCACAGATGTGGTTCTTT...GAGAGCAAAATATAAGGCAAAGACCACTAGAGTGAGAACAAGAGGCTGCAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077075.5
CDS-3UTR GCA 90 bp	TCCCTTGCAGCCTCTTGTTCTCACTCTAGTGGTCTTTGCCTTATATTTTGCTCTGCACCAGTTAGGAAGTaGTTCTTCTCCAAAGTTCTC	+
Preference number: 4 (lower is better) Translates to: SLAASCSHSSGLCLIFCSAPVRK*FFSKVL Trigger: GAGAACTTTGGAGAAGAAGCACTTCCTAACTGGTGC...AGAGCAAAATATAAGGCAAAGACCACTAGAGTGAGAACAAGAGGCTGCAAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077075.5
CDS-3UTR TCA 90 bp	CCCTTGCAGCCTCTTGTTCTCACTCTAGTGGTCTTTGCCTTATATTTTGCTCTCAGAGAAACTCAGGCATaGCAGTCTGATTCTTTTCTT	+
Preference number: 4 (lower is better) Translates to: PLQPLVLTLVVFALYFALRETQA*QSDSFL Trigger: AAGAAAAGAATCAGACTGTCATGCCTGAGTTTCTCT...GAGAGCAAAATATAAGGCAAAGACCACTAGAGTGAGAACAAGAGGCTGCAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077075.5
CDS-3UTR GCA 90 bp	CCCTTGCAGCCTCTTGTTCTCACTCTAGTGGTCTTTGCCTTATATTTTGCTCTCAAATTGCCTTCAAGATaGAAACATAGGACACCAGGA	+
Preference number: 4 (lower is better) Translates to: PLQPLVLTLVVFALYFALKLPSR*KHRTPG Trigger: TCCTGGTGTCCTATGTTTGCATCTTGAAGGCAATTT...GAGAGCAAAATATAAGGCAAAGACCACTAGAGTGAGAACAAGAGGCTGCAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077075.5
CDS-3UTR GCA 90 bp	TCCCTTGCAGCCTCTTGTTCTCACTCTAGTGGTCTTTGCCTTATATTTTGCTCTGATGGCTTTGTTCCTTaGAAAAATGTCACACAGCAT	+
Preference number: 4 (lower is better) Translates to: SLAASCSHSSGLCLIFCSDGFVP*KNVTQH Trigger: ATGCTGTGTGACATTTTTGCAAGGAACAAAGCCATC...AGAGCAAAATATAAGGCAAAGACCACTAGAGTGAGAACAAGAGGCTGCAAGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077075.5
CDS-3UTR GCA 90 bp	TCCCTTGCAGCCTCTTGTTCTCACTCTAGTGGTCTTTGCCTTATATTTTGCTCTGAGAAAGCATTCAGTTaGCACAAAGAGACCAAAGAA	+
Preference number: 4 (lower is better) Translates to: SLAASCSHSSGLCLIFCSEKAFS*HKETKE Trigger: TTCTTTGGTCTCTTTGTGGCAACTGAATGCTTTCTC...AGAGCAAAATATAAGGCAAAGACCACTAGAGTGAGAACAAGAGGCTGCAAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077075.5
CDS-3UTR TCA 90 bp	TCCCTTGCAGCCTCTTGTTCTCACTCTAGTGGTCTTTGCCTTATATTTTGCTCTCATTACCCCCAAGAGTaGCAAGATAAACAAAGAAAA	+
Preference number: 4 (lower is better) Translates to: SLAASCSHSSGLCLIFCSHYPQE*QDKQRK Trigger: TTTTCTTTGTTTATCTTGTCACTCTTGGGGGTAATG...AGAGCAAAATATAAGGCAAAGACCACTAGAGTGAGAACAAGAGGCTGCAAGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077075.5
CDS-3UTR CAA 90 bp	CCCTTGCAGCCTCTTGTTCTCACTCTAGTGGTCTTTGCCTTATATTTTGCTCTCAGATGGCTTTGTTCCTaGCAAAAATGTCACACAGCA	+
Preference number: 5 (lower is better) Translates to: PLQPLVLTLVVFALYFALRWLCS*QKCHTA Trigger: TGCTGTGTGACATTTTTGCAAGGAACAAAGCCATCT...GAGAGCAAAATATAAGGCAAAGACCACTAGAGTGAGAACAAGAGGCTGCAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077075.5
CDS-3UTR CAA 90 bp	TCCCTTGCAGCCTCTTGTTCTCACTCTAGTGGTCTTTGCCTTATATTTTGCTCTACAAAAGAGATGGCTTaGTTCCTTGCAAAAATGTCA	+
Preference number: 5 (lower is better) Translates to: SLAASCSHSSGLCLIFCSTKEMA*FLAKMS Trigger: TGACATTTTTGCAAGGAACAAAGCCATCTCTTTTGT...AGAGCAAAATATAAGGCAAAGACCACTAGAGTGAGAACAAGAGGCTGCAAGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000077075.5
CDS TCA 72 bp	AGATGCAAACATAGGACACCAGGATTATCAGTCCACTaGGCACACCTACTGTGCCAGCCAAGACAAAAAGCA	+
Preference number: 6 (lower is better) Translates to: RCKHRTPGLSVH*AHLLCQPRQKA Trigger: TGCTTTTTGTCTTGGCTGGCACAGTAGGTGTGCTCAGTGGACTGATAATCCTGGTGTCCTATGTTTGCATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077075.5
CDS GCA 72 bp	TTTTCGTCTCCCATTGGCTGTCTGAATCTTCAAAATTaGCTTCAAGATGCAAACATAGGACACCAGGATTAT	+
Preference number: 6 (lower is better) Translates to: FSSPIGCLNLQN*LQDANIGHQDY Trigger: ATAATCCTGGTGTCCTATGTTTGCATCTTGAAGGCAATTTTGAAGATTCAGACAGCCAATGGGAGACGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077075.5