Pregenerated sensors for OLFR988 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075222Ensembl transcript IDs: ENSMUST00000099928.3, ENSMUST00000111597.3, ENSMUST00000215511.2
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTAATTACAGCTCCAGAGGATCTGATGCCTTTCCCTGGTGTCTTTTaGCATCAACATACTTGTGACACACAATCTCTCTCTCTCACACCT | + |
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Preference number: 1 (lower is better) Translates to: LITAPEDLMPFPGVF*HQHTCDTQSLSLTP Trigger: AGGTGTGAGAGAGAGAGATTGTGTGTCACAAGTATGTTGATGCCAAAAGACACCAGGGAAAGGCATCAGATCCTCTGGAGCTGTAATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| 3UTR-3UTR TCA 90 bp | CATGTAGGTTTAGAGGACCCAAGTTCAGTTTCTCAGCACCTATACTGGGAGGCTGCACAAATGCAACACTaGACACATTTGTTTTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: HVGLEDPSSVSQHLYWEAAQMQH*THLFFR Trigger: TCTGAAAAACAAATGTGTTCAGTGTTGCATTTGTGC...AGCCTCCCAGTATAGGTGCTGAGAAACTGAACTTGGGTCCTCTAAACCTACATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTCCAGAGGATCTGATGCCTTTCCCTGGTGTCTTTTGGCATCAACATACTTGTTCAGGAAGCACAAATaGAACACTGAACACATTTGT | + |
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Preference number: 2 (lower is better) Translates to: SSRGSDAFPWCLLASTYLFRKHK*NTEHIC Trigger: ACAAATGTGTTCAGTGTTGCATTTGTGCTTCCTGAA...CAAGTATGTTGATGCCAAAAGACACCAGGGAAAGGCATCAGATCCTCTGGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGCTTCCTTTAATTACAGCTCCAGAGGATCTGATGCCTTTCCCTGGTGTCTTTTCAGGAAGCACAAATaGAACACTGAACACATTTGT | + |
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Preference number: 2 (lower is better) Translates to: IASFNYSSRGSDAFPWCLFRKHK*NTEHIC Trigger: ACAAATGTGTTCAGTGTTGCATTTGTGCTTCCTGAA...AAGACACCAGGGAAAGGCATCAGATCCTCTGGAGCTGTAATTAAAGGAAGCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| 3UTR CCA 72 bp | GCTCCAGAGGATCTGATGCCTTTCCCTGGTGTCTTTTaGCATCAACATACTTGTGACACACAATCTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: APEDLMPFPGVF*HQHTCDTQSLS Trigger: AGAGAGAGATTGTGTGTCACAAGTATGTTGATGCCAAAAGACACCAGGGAAAGGCATCAGATCCTCTGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| 3UTR-3UTR CAA 90 bp | AGCTCCAGAGGATCTGATGCCTTTCCCTGGTGTCTTTTGGCATCAACATACTTGCATTCAATATGTGCCTaGATATCTGGGGTTCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: SSRGSDAFPWCLLASTYLHSICA*ISGVQK Trigger: TTTCTGAACCCCAGATATCAAGGCACATATTGAATG...CAAGTATGTTGATGCCAAAAGACACCAGGGAAAGGCATCAGATCCTCTGGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| 3UTR-3UTR CAA 90 bp | GCTCCAGAGGATCTGATGCCTTTCCCTGGTGTCTTTTGGCATCAACATACTTGTCATTCAATATGTGCCTaGATATCTGGGGTTCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: APEDLMPFPGVFWHQHTCHSICA*ISGVQK Trigger: TTTCTGAACCCCAGATATCAAGGCACATATTGAATG...ACAAGTATGTTGATGCCAAAAGACACCAGGGAAAGGCATCAGATCCTCTGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| 3UTR CCA 72 bp | CTCATTAAATCTCACAAAAAGTCACAAAAGTGGACTTaGAGAGATAGCATATCAGTTAAGCATGTAGGTTTA | + |
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Preference number: 3 (lower is better) Translates to: LIKSHKKSQKWT*RDSISVKHVGL Trigger: TAAACCTACATGCTTAACTGATATGCTATCTCTCCAAGTCCACTTTTGTGACTTTTTGTGAGATTTAATGAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR TCA 90 bp | AGCTCCAGAGGATCTGATGCCTTTCCCTGGTGTCTTTTGGCATCAACATACTTGCAGTGCTCACTAGGTTaGACCCCACAAAAACTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SSRGSDAFPWCLLASTYLQCSLG*TPQKLS Trigger: TGACAGTTTTTGTGGGGTTCAACCTAGTGAGCACTG...CAAGTATGTTGATGCCAAAAGACACCAGGGAAAGGCATCAGATCCTCTGGAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR TCA 90 bp | CATGTAGGTTTAGAGGACCCAAGTTCAGTTTCTCAGCACCTATACTGGGAGGCTCTTGGGAGTAATAGCTaGGGTATAGCAGAGATCAAC | + |
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Preference number: 4 (lower is better) Translates to: HVGLEDPSSVSQHLYWEALGSNS*GIAEIN Trigger: GTTGATCTCTGCTATACCTCAGCTATTACTCCCAAG...AGCCTCCCAGTATAGGTGCTGAGAAACTGAACTTGGGTCCTCTAAACCTACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR TCA 90 bp | AGCTCCAGAGGATCTGATGCCTTTCCCTGGTGTCTTTTGGCATCAACATACTTGCTTGGGAGTAATAGCTaGGGTATAGCAGAGATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSRGSDAFPWCLLASTYLLGSNS*GIAEIN Trigger: GTTGATCTCTGCTATACCTCAGCTATTACTCCCAAG...CAAGTATGTTGATGCCAAAAGACACCAGGGAAAGGCATCAGATCCTCTGGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR TCA 90 bp | GCTCCAGAGGATCTGATGCCTTTCCCTGGTGTCTTTTGGCATCAACATACTTGTGTAACATACATCCCATaGTGGAGATGGATGCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: APEDLMPFPGVFWHQHTCVTYIP*WRWMLL Trigger: CAAAAGCATCCATCTCCATCATGGGATGTATGTTAC...ACAAGTATGTTGATGCCAAAAGACACCAGGGAAAGGCATCAGATCCTCTGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR CCA 90 bp | AATTACAGCTCCAGAGGATCTGATGCCTTTCCCTGGTGTCTTTTGGCATCAACACATTTAGGAAGCCCATaGTATAAGAACCCACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: NYSSRGSDAFPWCLLASTHLGSP*YKNPPA Trigger: TGCTGGTGGGTTCTTATACCATGGGCTTCCTAAATG...TGTTGATGCCAAAAGACACCAGGGAAAGGCATCAGATCCTCTGGAGCTGTAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR CCA 90 bp | ATAGCTTCCTTTAATTACAGCTCCAGAGGATCTGATGCCTTTCCCTGGTGTCTTCATTTAGGAAGCCCATaGTATAAGAACCCACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: IASFNYSSRGSDAFPWCLHLGSP*YKNPPA Trigger: TGCTGGTGGGTTCTTATACCATGGGCTTCCTAAATG...AAGACACCAGGGAAAGGCATCAGATCCTCTGGAGCTGTAATTAAAGGAAGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR CCA 90 bp | AGCTCCAGAGGATCTGATGCCTTTCCCTGGTGTCTTTTGGCATCAACATACTTGAAGACATCCTTAGGATaGCAGACAAGACATATGTGT | + |
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Preference number: 4 (lower is better) Translates to: SSRGSDAFPWCLLASTYLKTSLG*QTRHMC Trigger: ACACATATGTCTTGTCTGCCATCCTAAGGATGTCTT...CAAGTATGTTGATGCCAAAAGACACCAGGGAAAGGCATCAGATCCTCTGGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR TCA 90 bp | TACAGCTCCAGAGGATCTGATGCCTTTCCCTGGTGTCTTTTGGCATCAACATACTCATCGCAGAAAAAGTaGTTAATGGCATTGGATTTG | + |
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Preference number: 4 (lower is better) Translates to: YSSRGSDAFPWCLLASTYSSQKK*LMALDL Trigger: CAAATCCAATGCCATTAATCACTTTTTCTGCGATGA...GTATGTTGATGCCAAAAGACACCAGGGAAAGGCATCAGATCCTCTGGAGCTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR TCA 90 bp | AATTACAGCTCCAGAGGATCTGATGCCTTTCCCTGGTGTCTTTTGGCATCAACAATGTGTAGGAAAAGATaGCAACAAGTACAGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NYSSRGSDAFPWCLLASTMCRKR*QQVQCS Trigger: TGAGCACTGTACTTGTTGTCATCTTTTCCTACACAT...TGTTGATGCCAAAAGACACCAGGGAAAGGCATCAGATCCTCTGGAGCTGTAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR TCA 90 bp | TGCCTTGATATCTGGGGTTCAGAAATAGCTTGCTTGATAAACATTGTTGAATTACAGTGCTCACTAGGTTaGACCCCACAAAAACTGTCA | + |
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Preference number: 4 (lower is better) Translates to: CLDIWGSEIACLINIVELQCSLG*TPQKLS Trigger: TGACAGTTTTTGTGGGGTTCAACCTAGTGAGCACTG...TAATTCAACAATGTTTATCAAGCAAGCTATTTCTGAACCCCAGATATCAAGGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000099928.3 ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR TCA 90 bp | TTCAGGAAGCACAAATGCAACACTGAACACATTTGTTTTTCAGAAAGCATGAATCAGTGCTCACTAGGTTaGACCCCACAAAAACTGTCA | + |
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Preference number: 4 (lower is better) Translates to: FRKHKCNTEHICFSESMNQCSLG*TPQKLS Trigger: TGACAGTTTTTGTGGGGTTCAACCTAGTGAGCACTG...ATTCATGCTTTCTGAAAAACAAATGTGTTCAGTGTTGCATTTGTGCTTCCTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR GCA 90 bp | GTGTCTTTTGGCATCAACATACTTGTGACACACAATCTCTCTCTCTCACACCTACATGATGGAGATGGATaGTTTTGTCTCTATGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: VSFGINILVTHNLSLSHLHDGDG*FCLYEV Trigger: AACTTCATAGAGACAAAAGCATCCATCTCCATCATG...TAGGTGTGAGAGAGAGAGATTGTGTGTCACAAGTATGTTGATGCCAAAAGACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR TCA 90 bp | TGCCTTGATATCTGGGGTTCAGAAATAGCTTGCTTGATAAACATTGTTGAATTACTTGGGAGTAATAGCTaGGGTATAGCAGAGATCAAC | + |
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Preference number: 4 (lower is better) Translates to: CLDIWGSEIACLINIVELLGSNS*GIAEIN Trigger: GTTGATCTCTGCTATACCTCAGCTATTACTCCCAAG...TAATTCAACAATGTTTATCAAGCAAGCTATTTCTGAACCCCAGATATCAAGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099928.3 ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR CCA 90 bp | TGCCTTGATATCTGGGGTTCAGAAATAGCTTGCTTGATAAACATTGTTGAATTACATTTAGGAAGCCCATaGTATAAGAACCCACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: CLDIWGSEIACLINIVELHLGSP*YKNPPA Trigger: TGCTGGTGGGTTCTTATACCATGGGCTTCCTAAATG...TAATTCAACAATGTTTATCAAGCAAGCTATTTCTGAACCCCAGATATCAAGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099928.3 ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR TCA 90 bp | TGCCTTGATATCTGGGGTTCAGAAATAGCTTGCTTGATAAACATTGTTGAATTAGTAACATACATCCCATaGTGGAGATGGATGCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: CLDIWGSEIACLINIVELVTYIP*WRWMLL Trigger: CAAAAGCATCCATCTCCATCATGGGATGTATGTTAC...TAATTCAACAATGTTTATCAAGCAAGCTATTTCTGAACCCCAGATATCAAGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099928.3 ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR TCA 90 bp | TGCCTTGATATCTGGGGTTCAGAAATAGCTTGCTTGATAAACATTGTTGAATTAATGTGTAGGAAAAGATaGCAACAAGTACAGTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: CLDIWGSEIACLINIVELMCRKR*QQVQCS Trigger: TGAGCACTGTACTTGTTGTCATCTTTTCCTACACAT...TAATTCAACAATGTTTATCAAGCAAGCTATTTCTGAACCCCAGATATCAAGGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099928.3 ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR TCA 90 bp | TTCAGGAAGCACAAATGCAACACTGAACACATTTGTTTTTCAGAAAGCATGAATATGTGTAGGAAAAGATaGCAACAAGTACAGTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: FRKHKCNTEHICFSESMNMCRKR*QQVQCS Trigger: TGAGCACTGTACTTGTTGTCATCTTTTCCTACACAT...ATTCATGCTTTCTGAAAAACAAATGTGTTCAGTGTTGCATTTGTGCTTCCTGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR CCA 90 bp | TGCCTTGATATCTGGGGTTCAGAAATAGCTTGCTTGATAAACATTGTTGAATTAAAGACATCCTTAGGATaGCAGACAAGACATATGTGT | + |
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Preference number: 4 (lower is better) Translates to: CLDIWGSEIACLINIVELKTSLG*QTRHMC Trigger: ACACATATGTCTTGTCTGCCATCCTAAGGATGTCTT...TAATTCAACAATGTTTATCAAGCAAGCTATTTCTGAACCCCAGATATCAAGGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099928.3 ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR TCA 90 bp | TGCCTTGATATCTGGGGTTCAGAAATAGCTTGCTTGATAAACATTGTTGAATTATCATCGCAGAAAAAGTaGTTAATGGCATTGGATTTG | + |
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Preference number: 4 (lower is better) Translates to: CLDIWGSEIACLINIVELSSQKK*LMALDL Trigger: CAAATCCAATGCCATTAATCACTTTTTCTGCGATGA...TAATTCAACAATGTTTATCAAGCAAGCTATTTCTGAACCCCAGATATCAAGGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099928.3 ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR GCA 90 bp | TGCCTTGATATCTGGGGTTCAGAAATAGCTTGCTTGATAAACATTGTTGAATTACATGATGGAGATGGATaGTTTTGTCTCTATGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: CLDIWGSEIACLINIVELHDGDG*FCLYEV Trigger: AACTTCATAGAGACAAAAGCATCCATCTCCATCATG...TAATTCAACAATGTTTATCAAGCAAGCTATTTCTGAACCCCAGATATCAAGGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099928.3 ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR GCA 90 bp | TTCAGGAAGCACAAATGCAACACTGAACACATTTGTTTTTCAGAAAGCATGAATCATGATGGAGATGGATaGTTTTGTCTCTATGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: FRKHKCNTEHICFSESMNHDGDG*FCLYEV Trigger: AACTTCATAGAGACAAAAGCATCCATCTCCATCATG...ATTCATGCTTTCTGAAAAACAAATGTGTTCAGTGTTGCATTTGTGCTTCCTGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR CAA 90 bp | CATGTAGGTTTAGAGGACCCAAGTTCAGTTTCTCAGCACCTATACTGGGAGGCTTGCCTTTTCTTGCTCTaGAGAGTCATTGGTATGAGG | + |
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Preference number: 5 (lower is better) Translates to: HVGLEDPSSVSQHLYWEACLFLL*RVIGMR Trigger: CCTCATACCAATGACTCTCAAGAGCAAGAAAAGGCA...AGCCTCCCAGTATAGGTGCTGAGAAACTGAACTTGGGTCCTCTAAACCTACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR CAA 90 bp | CATGTAGGTTTAGAGGACCCAAGTTCAGTTTCTCAGCACCTATACTGGGAGGCTAGAAGCTGCCTTTTCTaGCTCTTGAGAGTCATTGGT | + |
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Preference number: 5 (lower is better) Translates to: HVGLEDPSSVSQHLYWEARSCLF*LLRVIG Trigger: ACCAATGACTCTCAAGAGCAAGAAAAGGCAGCTTCT...AGCCTCCCAGTATAGGTGCTGAGAAACTGAACTTGGGTCCTCTAAACCTACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR CAA 90 bp | CCTTTCCCTGGTGTCTTTTGGCATCAACATACTTGTGACACACAATCTCTCTCTACAGTGCTCACTAGGTaGAACCCCACAAAAACTGTC | + |
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Preference number: 5 (lower is better) Translates to: PFPGVFWHQHTCDTQSLSTVLTR*NPTKTV Trigger: GACAGTTTTTGTGGGGTTCAACCTAGTGAGCACTGT...AGAGAGAGATTGTGTGTCACAAGTATGTTGATGCCAAAAGACACCAGGGAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR CAA 90 bp | GTGTCTTTTGGCATCAACATACTTGTGACACACAATCTCTCTCTCTCACACCTAACAGTGCTCACTAGGTaGAACCCCACAAAAACTGTC | + |
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Preference number: 5 (lower is better) Translates to: VSFGINILVTHNLSLSHLTVLTR*NPTKTV Trigger: GACAGTTTTTGTGGGGTTCAACCTAGTGAGCACTGT...TAGGTGTGAGAGAGAGAGATTGTGTGTCACAAGTATGTTGATGCCAAAAGACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR CAA 90 bp | ATAGCTTCCTTTAATTACAGCTCCAGAGGATCTGATGCCTTTCCCTGGTGTCTTTGCCTTTTCTTGCTCTaGAGAGTCATTGGTATGAGG | + |
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Preference number: 5 (lower is better) Translates to: IASFNYSSRGSDAFPWCLCLFLL*RVIGMR Trigger: CCTCATACCAATGACTCTCAAGAGCAAGAAAAGGCA...AAGACACCAGGGAAAGGCATCAGATCCTCTGGAGCTGTAATTAAAGGAAGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR CAA 90 bp | TACAGCTCCAGAGGATCTGATGCCTTTCCCTGGTGTCTTTTGGCATCAACATACATGAATTCAGTCACTTaGGTGTCATTACTTTGTTCC | + |
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Preference number: 5 (lower is better) Translates to: YSSRGSDAFPWCLLASTYMNSVT*VSLLCS Trigger: GGAACAAAGTAATGACACCAAAGTGACTGAATTCAT...GTATGTTGATGCCAAAAGACACCAGGGAAAGGCATCAGATCCTCTGGAGCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR CAA 90 bp | TGCCTTGATATCTGGGGTTCAGAAATAGCTTGCTTGATAAACATTGTTGAATTAACAGTGCTCACTAGGTaGAACCCCACAAAAACTGTC | + |
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Preference number: 5 (lower is better) Translates to: CLDIWGSEIACLINIVELTVLTR*NPTKTV Trigger: GACAGTTTTTGTGGGGTTCAACCTAGTGAGCACTGT...TAATTCAACAATGTTTATCAAGCAAGCTATTTCTGAACCCCAGATATCAAGGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000099928.3 ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR CAA 90 bp | TGCCTTGATATCTGGGGTTCAGAAATAGCTTGCTTGATAAACATTGTTGAATTATGCCTTTTCTTGCTCTaGAGAGTCATTGGTATGAGG | + |
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Preference number: 5 (lower is better) Translates to: CLDIWGSEIACLINIVELCLFLL*RVIGMR Trigger: CCTCATACCAATGACTCTCAAGAGCAAGAAAAGGCA...TAATTCAACAATGTTTATCAAGCAAGCTATTTCTGAACCCCAGATATCAAGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099928.3 ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR CAA 90 bp | TGCCTTGATATCTGGGGTTCAGAAATAGCTTGCTTGATAAACATTGTTGAATTAAGAAGCTGCCTTTTCTaGCTCTTGAGAGTCATTGGT | + |
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Preference number: 5 (lower is better) Translates to: CLDIWGSEIACLINIVELRSCLF*LLRVIG Trigger: ACCAATGACTCTCAAGAGCAAGAAAAGGCAGCTTCT...TAATTCAACAATGTTTATCAAGCAAGCTATTTCTGAACCCCAGATATCAAGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099928.3 ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS-3UTR CAA 90 bp | TGCCTTGATATCTGGGGTTCAGAAATAGCTTGCTTGATAAACATTGTTGAATTAATGAATTCAGTCACTTaGGTGTCATTACTTTGTTCC | + |
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Preference number: 5 (lower is better) Translates to: CLDIWGSEIACLINIVELMNSVT*VSLLCS Trigger: GGAACAAAGTAATGACACCAAAGTGACTGAATTCAT...TAATTCAACAATGTTTATCAAGCAAGCTATTTCTGAACCCCAGATATCAAGGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099928.3 ENSMUST00000111597.3 ENSMUST00000215511.2 |
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| CDS CAA 72 bp | ATCATTAGAAATATTATGAACAGAATGTGCCAAGATTaGTGCTGTCCGGAAAATCCCAGAAGAATGAATTCA | + |
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Preference number: 6 (lower is better) Translates to: IIRNIMNRMCQD*CCPENPRRMNS Trigger: TGAATTCATTCTTCTGGGATTTTCCGGACAGCACAAATCTTGGCACATTCTGTTCATAATATTTCTAATGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099928.3 ENSMUST00000111597.3 ENSMUST00000215511.2 |
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