Pregenerated sensors for OLFR987 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075223Ensembl transcript IDs: ENSMUST00000216347.2
Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CATGTGCCATTCAATATGTGCCTTGATATCTGGGGTTCAGAAATAGCTTGCTTGATGTGCCAAGACTTGTaGTGCCCAGCAAATCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: HVPFNMCLDIWGSEIACLMCQDL*CPANPR Trigger: TCTGGGATTTGCTGGGCAGCACAAGTCTTGGCACAT...CAAGCAAGCTATTTCTGAACCCCAGATATCAAGGCACATATTGAATGGCACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216347.2 |
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| CDS-3UTR TCA 90 bp | AACCATGTGCCATTCAATATGTGCCTTGATATCTGGGGTTCAGAAATAGCTTGCCAGTACTCAACAGGTTaGACCCCACAAAAACTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NHVPFNMCLDIWGSEIACQYSTG*TPQKLS Trigger: TGACAGTTTTTGTGGGGTTCAACCTGTTGAGTACTG...GCAAGCTATTTCTGAACCCCAGATATCAAGGCACATATTGAATGGCACATGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216347.2 |
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| CDS-3UTR GCA 90 bp | CATGTGCCATTCAATATGTGCCTTGATATCTGGGGTTCAGAAATAGCTTGCTTGATTATGAACAGAATGTaGCAAGACTTGTGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HVPFNMCLDIWGSEIACLIMNRM*QDLCCP Trigger: TGGGCAGCACAAGTCTTGGCACATTCTGTTCATAAT...CAAGCAAGCTATTTCTGAACCCCAGATATCAAGGCACATATTGAATGGCACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216347.2 |
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| CDS-3UTR TCA 90 bp | AACCATGTGCCATTCAATATGTGCCTTGATATCTGGGGTTCAGAAATAGCTTGCATATGTAAGAAAAGATaGCAACCAGCACAGTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: NHVPFNMCLDIWGSEIACICKKR*QPAQYS Trigger: TGAGTACTGTGCTGGTTGTCATCTTTTCTTACATAT...GCAAGCTATTTCTGAACCCCAGATATCAAGGCACATATTGAATGGCACATGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216347.2 |
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| CDS-3UTR CAA 90 bp | AACCATGTGCCATTCAATATGTGCCTTGATATCTGGGGTTCAGAAATAGCTTGCAGAATGTGCCAAGACTaGTGCTGCCCAGCAAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: NHVPFNMCLDIWGSEIACRMCQD*CCPANP Trigger: GGGATTTGCTGGGCAGCACAAGTCTTGGCACATTCT...GCAAGCTATTTCTGAACCCCAGATATCAAGGCACATATTGAATGGCACATGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216347.2 |
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| CDS-3UTR CAA 90 bp | AACCATGTGCCATTCAATATGTGCCTTGATATCTGGGGTTCAGAAATAGCTTGCAGAAGCTGCCTTTTCTaGCTCCTGAGAGTCATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: NHVPFNMCLDIWGSEIACRSCLF*LLRVIG Trigger: ACCAATGACTCTCAGGAGCAAGAAAAGGCAGCTTCT...GCAAGCTATTTCTGAACCCCAGATATCAAGGCACATATTGAATGGCACATGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216347.2 |
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