Pregenerated sensors for OLFR986 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051095Ensembl transcript IDs: ENSMUST00000062229.6, ENSMUST00000214763.2, ENSMUST00000216720.2, ENSMUST00000218134.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGGTCAAAGCCAGCTTGTTTTCCTTGGCAAATCCCAAGTTTCCCTTaGGAGAGAGGCTGCCCCTCACTATGTATGCTAATAAACACAGCC | + |
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Preference number: 1 (lower is better) Translates to: RSKPACFPWQIPSFP*ERGCPSLCMLINTA Trigger: GGCTGTGTTTATTAGCATACATAGTGAGGGGCAGCCTCTCTCCCAAGGGAAACTTGGGATTTGCCAAGGAAAACAAGCTGGCTTTGACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR GCA 90 bp | GCTTGTTTTCCTTGGCAAATCCCAAGTTTCCCTTGGGAGAGAGGCTaGCCCTCACTATGTATGCTAATAAACACAGCCCTGTTTATTGAA | + |
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Preference number: 1 (lower is better) Translates to: ACFPWQIPSFPWERG*PSLCMLINTALFIE Trigger: TTCAATAAACAGGGCTGTGTTTATTAGCATACATAGTGAGGGGCAGCCTCTCTCCCAAGGGAAACTTGGGATTTGCCAAGGAAAACAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR TCA 90 bp | TACTCATCTCTACAAGCTGACTCGCTGGCATCATCATTAGAGTTTTaGCAGATATCTTGCCCAAGTGTGTGTTTGCTTCTTAGGGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: YSSLQADSLASSLEF*QISCPSVCLLLRGS Trigger: AGAGCCCCTAAGAAGCAAACACACACTTGGGCAAGATATCTGTCAAAACTCTAATGATGATGCCAGCGAGTCAGCTTGTAGAGATGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR CCA 90 bp | CTGCAAGTGAGCCTTCACAGTCATGAACTTCACAGAAACCAGAAATaGAATTCTCCAACAAGGCTTTCAGTGATATTAGCTCTGAGGCAT | + |
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Preference number: 1 (lower is better) Translates to: LQVSLHSHELHRNQK*NSPTRLSVILALRH Trigger: ATGCCTCAGAGCTAATATCACTGAAAGCCTTGTTGGAGAATTCCATTTCTGGTTTCTGTGAAGTTCATGACTGTGAAGGCTCACTTGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR CCA 90 bp | GTCCTGAGTTCTGCCACATGTATCTTAGAGAATCTTAAGATGTTTTaGCTGAAGATTTCGGAGACGTTTTCCTCTTTAAGGAGAAATTCC | + |
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Preference number: 1 (lower is better) Translates to: VLSSATCILENLKMF*LKISETFSSLRRNS Trigger: GGAATTTCTCCTTAAAGAGGAAAACGTCTCCGAAATCTTCAGCCAAAACATCTTAAGATTCTCTAAGATACATGTGGCAGAACTCAGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCCTGCAGCCCCCTATGGCTGTAACAGCTTCCTCATTCCTAGCCCCTTATTCATCCCAAGTTTCCCTTaGGAGAGAGGCTGCCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: SPAAPYGCNSFLIPSPLFIPSFP*ERGCPS Trigger: TGAGGGGCAGCCTCTCTCCCAAGGGAAACTTGGGAT...GAATAAGGGGCTAGGAATGAGGAAGCTGTTACAGCCATAGGGGGCTGCAGGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCCTGCAGCCCCCTATGGCTGTAACAGCTTCCTCATTCCTAGCCCCTTATTCCCAGCTTGTTTTCCTTaGCAAATCCCAAGTTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: SPAAPYGCNSFLIPSPLFPACFP*QIPSFP Trigger: AGGGAAACTTGGGATTTGCCAAGGAAAACAAGCTGG...GAATAAGGGGCTAGGAATGAGGAAGCTGTTACAGCCATAGGGGGCTGCAGGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR CAA 90 bp | ACGGTCAAAGCCAGCTTGTTTTCCTTGGCAAATCCCAAGTTTCCCTaGGGAGAGAGGCTGCCCCTCACTATGTATGCTAATAAACACAGC | + |
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Preference number: 2 (lower is better) Translates to: TVKASLFSLANPKFP*GERLPLTMYANKHS Trigger: GCTGTGTTTATTAGCATACATAGTGAGGGGCAGCCTCTCTCCCAAGGGAAACTTGGGATTTGCCAAGGAAAACAAGCTGGCTTTGACCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR GCA 90 bp | AGTCCTGCAGCCCCCTATGGCTGTAACAGCTTCCTCATTCCTAGCCCCTTATTCCCTGTCTCTTCCTGCTaGTGCATAAATCTAACAGTT | + |
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Preference number: 2 (lower is better) Translates to: SPAAPYGCNSFLIPSPLFPVSSC*CINLTV Trigger: AACTGTTAGATTTATGCAGCAGCAGGAAGAGACAGG...GAATAAGGGGCTAGGAATGAGGAAGCTGTTACAGCCATAGGGGGCTGCAGGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCTGCAGCCCCCTATGGCTGTAACAGCTTCCTCATTCCTAGCCCCTTATTCTCTTCCTGTCTCTTCCTaGTGCTGCATAAATCTAACA | + |
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Preference number: 2 (lower is better) Translates to: VLQPPMAVTASSFLAPYSLPVSS*CCINLT Trigger: TGTTAGATTTATGCAGCAGCAGGAAGAGACAGGAAG...AGAATAAGGGGCTAGGAATGAGGAAGCTGTTACAGCCATAGGGGGCTGCAGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR CCA 90 bp | CATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAAATCCCAAGTTTCCCTTaGGAGAGAGGCTGCCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: HGPSFHLSSKLCLCNSFQIPSFP*ERGCPS Trigger: TGAGGGGCAGCCTCTCTCCCAAGGGAAACTTGGGAT...TTGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGGGCTGAGACAACAAGGCATGGGATGCCTTGTGCGTGGGGCAGCAAGATACTTACTGACATTTGTCTaGCTTTGCTCTTTTTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: IGLRQQGMGCLVRGAARYLLTFV*LCSFSL Trigger: AAGGGAAAAAGAGCAAAGTCAGACAAATGTCAGTAA...GTATCTTGCTGCCCCACGCACAAGGCATCCCATGCCTTGTTGTCTCAGCCCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCCTGCAGCCCCCTATGGCTGTAACAGCTTCCTCATTCCTAGCCCCTTATTCTTACTGACATTTGTCTaGCTTTGCTCTTTTTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: SPAAPYGCNSFLIPSPLFLLTFV*LCSFSL Trigger: AAGGGAAAAAGAGCAAAGTCAGACAAATGTCAGTAA...GAATAAGGGGCTAGGAATGAGGAAGCTGTTACAGCCATAGGGGGCTGCAGGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCCCTTGGGAGAGAGGCTGCCCCTCACTATGTATGCTAATAAACACAGCCCTCCTGTCTCTTCCTGCTaGTGCATAAATCTAACAGTT | + |
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Preference number: 2 (lower is better) Translates to: FPLGERLPLTMYANKHSPPVSSC*CINLTV Trigger: AACTGTTAGATTTATGCAGCAGCAGGAAGAGACAGG...AGGGCTGTGTTTATTAGCATACATAGTGAGGGGCAGCCTCTCTCCCAAGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGCCAGCTTGTTTTCCTTGGCAAATCCCAAGTTTCCCTTGGGAGAGAGGCTGCTTCCTGTCTCTTCCTaGTGCTGCATAAATCTAACA | + |
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Preference number: 2 (lower is better) Translates to: KASLFSLANPKFPLGERLLPVSS*CCINLT Trigger: TGTTAGATTTATGCAGCAGCAGGAAGAGACAGGAAG...CAGCCTCTCTCCCAAGGGAAACTTGGGATTTGCCAAGGAAAACAAGCTGGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR CCA 90 bp | AACCAGAAATGGAATTCTCCAACAAGGCTTTCAGTGATATTAGCTCTGAGGCATATCCCAAGTTTCCCTTaGGAGAGAGGCTGCCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: NQKWNSPTRLSVILALRHIPSFP*ERGCPS Trigger: TGAGGGGCAGCCTCTCTCCCAAGGGAAACTTGGGAT...ATGCCTCAGAGCTAATATCACTGAAAGCCTTGTTGGAGAATTCCATTTCTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCCCTTGGGAGAGAGGCTGCCCCTCACTATGTATGCTAATAAACACAGCCCTTTACTGACATTTGTCTaGCTTTGCTCTTTTTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: FPLGERLPLTMYANKHSPLLTFV*LCSFSL Trigger: AAGGGAAAAAGAGCAAAGTCAGACAAATGTCAGTAA...AGGGCTGTGTTTATTAGCATACATAGTGAGGGGCAGCCTCTCTCCCAAGGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGCCAGCTTGTTTTCCTTGGCAAATCCCAAGTTTCCCTTGGGAGAGAGGCTGAATCTTAAGATGTTTTaGCTGAAGATTTCGGAGACG | + |
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Preference number: 2 (lower is better) Translates to: KASLFSLANPKFPLGERLNLKMF*LKISET Trigger: CGTCTCCGAAATCTTCAGCCAAAACATCTTAAGATT...CAGCCTCTCTCCCAAGGGAAACTTGGGATTTGCCAAGGAAAACAAGCTGGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCCTTGGGAGAGAGGCTGCCCCTCACTATGTATGCTAATAAACACAGCCCTAATCTTAAGATGTTTTaGCTGAAGATTTCGGAGACG | + |
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Preference number: 2 (lower is better) Translates to: FPLGERLPLTMYANKHSPNLKMF*LKISET Trigger: CGTCTCCGAAATCTTCAGCCAAAACATCTTAAGATT...AGGGCTGTGTTTATTAGCATACATAGTGAGGGGCAGCCTCTCTCCCAAGGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR CCA 90 bp | CATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAACCAGCTTGTTTTCCTTaGCAAATCCCAAGTTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: HGPSFHLSSKLCLCNSFQPACFP*QIPSFP Trigger: AGGGAAACTTGGGATTTGCCAAGGAAAACAAGCTGG...TTGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR TCA 90 bp | AACCAGAAATGGAATTCTCCAACAAGGCTTTCAGTGATATTAGCTCTGAGGCATAAAGACCATCAGCATTaGCAAGGAGACTCCAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: NQKWNSPTRLSVILALRHKDHQH*QGDSSA Trigger: TGCACTGGAGTCTCCTTGTCAATGCTGATGGTCTTT...ATGCCTCAGAGCTAATATCACTGAAAGCCTTGTTGGAGAATTCCATTTCTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR GCA 90 bp | CATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAAGCAAGTCCTGAGTTCTaGCACATGTATCTTAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: HGPSFHLSSKLCLCNSFQASPEF*HMYLRE Trigger: TTCTCTAAGATACATGTGGCAGAACTCAGGACTTGC...TTGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR GCA 90 bp | CATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAAGTCTCTTCCTGCTGCTaGATAAATCTAACAGTTATC | + |
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Preference number: 2 (lower is better) Translates to: HGPSFHLSSKLCLCNSFQVSSCC*INLTVI Trigger: GATAACTGTTAGATTTATGCAGCAGCAGGAAGAGAC...TTGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR CCA 90 bp | CATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAACACAGAAACCAGAAATaGAATTCTCCAACAAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: HGPSFHLSSKLCLCNSFQHRNQK*NSPTRL Trigger: AAGCCTTGTTGGAGAATTCCATTTCTGGTTTCTGTG...TTGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR TCA 90 bp | AACCAGAAATGGAATTCTCCAACAAGGCTTTCAGTGATATTAGCTCTGAGGCATGGCCTTATTAACAACTaGCCAAACAGAAAGCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: NQKWNSPTRLSVILALRHGLINN*PNRKQV Trigger: AACCTGCTTTCTGTTTGGTCAGTTGTTAATAAGGCC...ATGCCTCAGAGCTAATATCACTGAAAGCCTTGTTGGAGAATTCCATTTCTGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR TCA 90 bp | TCATACAGCCTGTTTCTGAGTGTATGTGTTCAATTTAATACCGAAAGGAATGTAAAAGACCATCAGCATTaGCAAGGAGACTCCAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: SYSLFLSVCVQFNTERNVKDHQH*QGDSSA Trigger: TGCACTGGAGTCTCCTTGTCAATGCTGATGGTCTTT...TACATTCCTTTCGGTATTAAATTGAACACATACACTCAGAAACAGGCTGTATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTCAGTGGTAAAACAGGATTCCTATGAGATTACAGATGACTTTGTTAAGCCTGCAAGTCCTGAGTTCTaGCACATGTATCTTAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: VSVVKQDSYEITDDFVKPASPEF*HMYLRE Trigger: TTCTCTAAGATACATGTGGCAGAACTCAGGACTTGC...AGGCTTAACAAAGTCATCTGTAATCTCATAGGAATCCTGTTTTACCACTGAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR TCA 90 bp | AACCAGAAATGGAATTCTCCAACAAGGCTTTCAGTGATATTAGCTCTGAGGCATATTACAAGATGCCTTTaGGTTTTTATACTACCTGGG | + |
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Preference number: 2 (lower is better) Translates to: NQKWNSPTRLSVILALRHITRCL*VFILPG Trigger: CCCAGGTAGTATAAAAACTCAAAGGCATCTTGTAAT...ATGCCTCAGAGCTAATATCACTGAAAGCCTTGTTGGAGAATTCCATTTCTGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTCAGTGGTAAAACAGGATTCCTATGAGATTACAGATGACTTTGTTAAGCCTGTCTCTTCCTGCTGCTaGATAAATCTAACAGTTATC | + |
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Preference number: 2 (lower is better) Translates to: VSVVKQDSYEITDDFVKPVSSCC*INLTVI Trigger: GATAACTGTTAGATTTATGCAGCAGCAGGAAGAGAC...AGGCTTAACAAAGTCATCTGTAATCTCATAGGAATCCTGTTTTACCACTGAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR TCA 90 bp | TCATACAGCCTGTTTCTGAGTGTATGTGTTCAATTTAATACCGAAAGGAATGTAGGCCTTATTAACAACTaGCCAAACAGAAAGCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: SYSLFLSVCVQFNTERNVGLINN*PNRKQV Trigger: AACCTGCTTTCTGTTTGGTCAGTTGTTAATAAGGCC...TACATTCCTTTCGGTATTAAATTGAACACATACACTCAGAAACAGGCTGTATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR GCA 90 bp | TCATACAGCCTGTTTCTGAGTGTATGTGTTCAATTTAATACCGAAAGGAATGTAGCAAGTCCTGAGTTCTaGCACATGTATCTTAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: SYSLFLSVCVQFNTERNVASPEF*HMYLRE Trigger: TTCTCTAAGATACATGTGGCAGAACTCAGGACTTGC...TACATTCCTTTCGGTATTAAATTGAACACATACACTCAGAAACAGGCTGTATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR CCA 90 bp | TCATACAGCCTGTTTCTGAGTGTATGTGTTCAATTTAATACCGAAAGGAATGTATTTGTTAAGCCTTACTaGTCAGCACAGAAAGGAATG | + |
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Preference number: 2 (lower is better) Translates to: SYSLFLSVCVQFNTERNVFVKPY*SAQKGM Trigger: CATTCCTTTCTGTGCTGACCAGTAAGGCTTAACAAA...TACATTCCTTTCGGTATTAAATTGAACACATACACTCAGAAACAGGCTGTATGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR CAA 90 bp | ATAGGGCTGAGACAACAAGGCATGGGATGCCTTGTGCGTGGGGCAGCAAGATACTACTCTTCTACAGGTTaGCCTCACTGTCAGCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: IGLRQQGMGCLVRGAARYYSSTG*PHCQPL Trigger: CAAGGGCTGACAGTGAGGCAAACCTGTAGAAGAGTA...GTATCTTGCTGCCCCACGCACAAGGCATCCCATGCCTTGTTGTCTCAGCCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR CCA 72 bp | GATCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTaGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: DPPIGLQIPLAP*VLSLAPPLGAL Trigger: CAGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTGCTTCTTAGGGGCTCTGCATGCTAAATCTGCAAGTGAGCCTTCACAGTCAAATCCCAAGTTTCCCTaGGGAGAGAGGCTGCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: VCFLGALHAKSASEPSQSNPKFP*GERLPL Trigger: GAGGGGCAGCCTCTCTCCCAAGGGAAACTTGGGATT...TGACTGTGAAGGCTCACTTGCAGATTTAGCATGCAGAGCCCCTAAGAAGCAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR CAA 90 bp | AGTCCTGCAGCCCCCTATGGCTGTAACAGCTTCCTCATTCCTAGCCCCTTATTCGCCAGCTTGTTTTCCTaGGCAAATCCCAAGTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: SPAAPYGCNSFLIPSPLFASLFS*ANPKFP Trigger: GGGAAACTTGGGATTTGCCAAGGAAAACAAGCTGGC...GAATAAGGGGCTAGGAATGAGGAAGCTGTTACAGCCATAGGGGGCTGCAGGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR GCA 72 bp | CCTTGGCAAATCCCAAGTTTCCCTTGGGAGAGAGGCTaGCCCTCACTATGTATGCTAATAAACACAGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: PWQIPSFPWERG*PSLCMLINTAL Trigger: CAGGGCTGTGTTTATTAGCATACATAGTGAGGGGCAGCCTCTCTCCCAAGGGAAACTTGGGATTTGCCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR CAA 90 bp | CATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAAAATCCCAAGTTTCCCTaGGGAGAGAGGCTGCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: HGPSFHLSSKLCLCNSFQNPKFP*GERLPL Trigger: GAGGGGCAGCCTCTCTCCCAAGGGAAACTTGGGATT...TTGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTGCTTCTTAGGGGCTCTGCATGCTAAATCTGCAAGTGAGCCTTCACAGTCAGCCAGCTTGTTTTCCTaGGCAAATCCCAAGTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: VCFLGALHAKSASEPSQSASLFS*ANPKFP Trigger: GGGAAACTTGGGATTTGCCAAGGAAAACAAGCTGGC...TGACTGTGAAGGCTCACTTGCAGATTTAGCATGCAGAGCCCCTAAGAAGCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTGCTTCTTAGGGGCTCTGCATGCTAAATCTGCAAGTGAGCCTTCACAGTCAACGGTCAAAGCCAGCTaGTTTTCCTTGGCAAATCCC | + |
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Preference number: 3 (lower is better) Translates to: VCFLGALHAKSASEPSQSTVKAS*FSLANP Trigger: GGGATTTGCCAAGGAAAACAAGCTGGCTTTGACCGT...TGACTGTGAAGGCTCACTTGCAGATTTAGCATGCAGAGCCCCTAAGAAGCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTGCTTCTTAGGGGCTCTGCATGCTAAATCTGCAAGTGAGCCTTCACAGTCAACACAGCCCTGTTTATaGAAAGCCAGACTTCCTGTC | + |
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Preference number: 3 (lower is better) Translates to: VCFLGALHAKSASEPSQSTQPCL*KARLPV Trigger: GACAGGAAGTCTGGCTTTCAATAAACAGGGCTGTGT...TGACTGTGAAGGCTCACTTGCAGATTTAGCATGCAGAGCCCCTAAGAAGCAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTGCTTCTTAGGGGCTCTGCATGCTAAATCTGCAAGTGAGCCTTCACAGTCAGAGAGCTTATCTCCTTaGGGCCAGTACTTTCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: VCFLGALHAKSASEPSQSESLSP*GQYFQE Trigger: TTCCTGAAAGTACTGGCCCAAAGGAGATAAGCTCTC...TGACTGTGAAGGCTCACTTGCAGATTTAGCATGCAGAGCCCCTAAGAAGCAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| 3UTR GCA 72 bp | CATACTCTTCTACAGGTTTGCCTCACTGTCAGCCCTTaGATTAGCATCTGCATTCGGCTCCTTTTGATGTAC | + |
|
Preference number: 3 (lower is better) Translates to: HTLLQVCLTVSP*ISICIRLLLMY Trigger: GTACATCAAAAGGAGCCGAATGCAGATGCTAATGCAAGGGCTGACAGTGAGGCAAACCTGTAGAAGAGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| 3UTR CCA 72 bp | TTATGGGGTGGATCCCTGGATAAGGCAGTCTCTACATaGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LWGGSLDKAVST*SILSSQLQTLS Trigger: AGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCATGTAGAGACTGCCTTATCCAGGGATCCACCCCATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCAGAAATGGAATTCTCCAACAAGGCTTTCAGTGATATTAGCTCTGAGGCATTACTCTTCTACAGGTTaGCCTCACTGTCAGCCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: NQKWNSPTRLSVILALRHYSSTG*PHCQPL Trigger: CAAGGGCTGACAGTGAGGCAAACCTGTAGAAGAGTA...ATGCCTCAGAGCTAATATCACTGAAAGCCTTGTTGGAGAATTCCATTTCTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTGCTTCTTAGGGGCTCTGCATGCTAAATCTGCAAGTGAGCCTTCACAGTCAGACATTTGTCTGACTTaGCTCTTTTTCCCTTTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VCFLGALHAKSASEPSQSDICLT*LFFPLA Trigger: AGCTAAAGGGAAAAAGAGCAAAGTCAGACAAATGTC...TGACTGTGAAGGCTCACTTGCAGATTTAGCATGCAGAGCCCCTAAGAAGCAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| 3UTR TCA 72 bp | CTCACTATGTATGCTAATAAACACAGCCCTGTTTATTaGAAGCCAGACTTCCTGTCTCTTCCTGCTGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LTMYANKHSPVY*KPDFLSLPAAA Trigger: TGCAGCAGCAGGAAGAGACAGGAAGTCTGGCTTTCAATAAACAGGGCTGTGTTTATTAGCATACATAGTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAAGTTTTGACAGATATCTaGCCCAAGTGTGTGTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: HGPSFHLSSKLCLCNSFQVLTDI*PKCVFA Trigger: AGCAAACACACACTTGGGCAAGATATCTGTCAAAAC...TTGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| 3UTR TCA 72 bp | CTACAAGCTGACTCGCTGGCATCATCATTAGAGTTTTaGCAGATATCTTGCCCAAGTGTGTGTTTGCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LQADSLASSLEF*QISCPSVCLLL Trigger: AAGAAGCAAACACACACTTGGGCAAGATATCTGTCAAAACTCTAATGATGATGCCAGCGAGTCAGCTTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATACAGCCTGTTTCTGAGTGTATGTGTTCAATTTAATACCGAAAGGAATGTAGCCAGCTTGTTTTCCTaGGCAAATCCCAAGTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SYSLFLSVCVQFNTERNVASLFS*ANPKFP Trigger: GGGAAACTTGGGATTTGCCAAGGAAAACAAGCTGGC...TACATTCCTTTCGGTATTAAATTGAACACATACACTCAGAAACAGGCTGTATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCAGAAATGGAATTCTCCAACAAGGCTTTCAGTGATATTAGCTCTGAGGCATGACATTTGTCTGACTTaGCTCTTTTTCCCTTTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: NQKWNSPTRLSVILALRHDICLT*LFFPLA Trigger: AGCTAAAGGGAAAAAGAGCAAAGTCAGACAAATGTC...ATGCCTCAGAGCTAATATCACTGAAAGCCTTGTTGGAGAATTCCATTTCTGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| 3UTR GCA 72 bp | CCCTGTTTATTGAAAGCCAGACTTCCTGTCTCTTCCTaGTGCTGCATAAATCTAACAGTTATCAATAAACGA | + |
|
Preference number: 3 (lower is better) Translates to: PCLLKARLPVSS*CCINLTVINKR Trigger: TCGTTTATTGATAACTGTTAGATTTATGCAGCAGCAGGAAGAGACAGGAAGTCTGGCTTTCAATAAACAGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| 3UTR CCA 72 bp | TCCTATGAGATTACAGATGACTTTGTTAAGCCTTACTaGTCAGCACAGAAAGGAATGTCTGTAAAGACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SYEITDDFVKPY*SAQKGMSVKTV Trigger: GACTGTCTTTACAGACATTCCTTTCTGTGCTGACCAGTAAGGCTTAACAAAGTCATCTGTAATCTCATAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| 3UTR GCA 72 bp | TTATTGAAAGCCAGACTTCCTGTCTCTTCCTGCTGCTaGATAAATCTAACAGTTATCAATAAACGAGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LLKARLPVSSCC*INLTVINKRGK Trigger: TTTCCCTCGTTTATTGATAACTGTTAGATTTATGCAGCAGCAGGAAGAGACAGGAAGTCTGGCTTTCAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| 3UTR CCA 72 bp | TCTGCCACATGTATCTTAGAGAATCTTAAGATGTTTTaGCTGAAGATTTCGGAGACGTTTTCCTCTTTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SATCILENLKMF*LKISETFSSLR Trigger: CCTTAAAGAGGAAAACGTCTCCGAAATCTTCAGCCAAAACATCTTAAGATTCTCTAAGATACATGTGGCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATACAGCCTGTTTCTGAGTGTATGTGTTCAATTTAATACCGAAAGGAATGTAGTTTTGACAGATATCTaGCCCAAGTGTGTGTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SYSLFLSVCVQFNTERNVVLTDI*PKCVFA Trigger: AGCAAACACACACTTGGGCAAGATATCTGTCAAAAC...TACATTCCTTTCGGTATTAAATTGAACACATACACTCAGAAACAGGCTGTATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATACAGCCTGTTTCTGAGTGTATGTGTTCAATTTAATACCGAAAGGAATGTAGACATTTGTCTGACTTaGCTCTTTTTCCCTTTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SYSLFLSVCVQFNTERNVDICLT*LFFPLA Trigger: AGCTAAAGGGAAAAAGAGCAAAGTCAGACAAATGTC...TACATTCCTTTCGGTATTAAATTGAACACATACACTCAGAAACAGGCTGTATGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR TCA 90 bp | ATAGGGCTGAGACAACAAGGCATGGGATGCCTTGTGCGTGGGGCAGCAAGATACCTGCTAGCCAGGAGCTaGGGGCCAGCTGTAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IGLRQQGMGCLVRGAARYLLARS*GPAVGR Trigger: TCTGCCTACAGCTGGCCCTCAGCTCCTGGCTAGCAG...GTATCTTGCTGCCCCACGCACAAGGCATCCCATGCCTTGTTGTCTCAGCCCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCAATAGGGCTGAGACAACAAGGCATGGGATGCCTTGTGCGTGGGGCAGCACTGCTAGCCAGGAGCTaGGGGCCAGCTGTAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KAIGLRQQGMGCLVRGAALLARS*GPAVGR Trigger: TCTGCCTACAGCTGGCCCTCAGCTCCTGGCTAGCAG...TGCTGCCCCACGCACAAGGCATCCCATGCCTTGTTGTCTCAGCCCTATTGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR CCA 90 bp | ATAGGGCTGAGACAACAAGGCATGGGATGCCTTGTGCGTGGGGCAGCAAGATACCCTTTTGGCGGCCAGTaGCTGAAGGGATCCGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IGLRQQGMGCLVRGAARYPFGGQ*LKGSVG Trigger: TCCTACGGATCCCTTCAGCCACTGGCCGCCAAAAGG...GTATCTTGCTGCCCCACGCACAAGGCATCCCATGCCTTGTTGTCTCAGCCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCAATAGGGCTGAGACAACAAGGCATGGGATGCCTTGTGCGTGGGGCAGCAGATGGTGAAGAGGAGTaGCCCTGGGATCACGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KAIGLRQQGMGCLVRGAADGEEE*PWDHEN Trigger: ATTCTCGTGATCCCAGGGTCACTCCTCTTCACCATC...TGCTGCCCCACGCACAAGGCATCCCATGCCTTGTTGTCTCAGCCCTATTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR TCA 90 bp | AGTCCTGCAGCCCCCTATGGCTGTAACAGCTTCCTCATTCCTAGCCCCTTATTCGACAAAAGACAATGGTaGAGCCTGCTAGCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPAAPYGCNSFLIPSPLFDKRQW*SLLARS Trigger: GCTCCTGGCTAGCAGGCTTCACCATTGTCTTTTGTC...GAATAAGGGGCTAGGAATGAGGAAGCTGTTACAGCCATAGGGGGCTGCAGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCAATAGGGCTGAGACAACAAGGCATGGGATGCCTTGTGCGTGGGGCAGCAGTAGTTCCAATATGCTaGTGTCCGCACAGGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KAIGLRQQGMGCLVRGAAVVPIC*CPHRQL Trigger: AAGCTGCCTGTGCGGACACCAGCATATTGGAACTAC...TGCTGCCCCACGCACAAGGCATCCCATGCCTTGTTGTCTCAGCCCTATTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR CCA 90 bp | ATAGGGCTGAGACAACAAGGCATGGGATGCCTTGTGCGTGGGGCAGCAAGATACGTAGTTCCAATATGCTaGTGTCCGCACAGGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IGLRQQGMGCLVRGAARYVVPIC*CPHRQL Trigger: AAGCTGCCTGTGCGGACACCAGCATATTGGAACTAC...GTATCTTGCTGCCCCACGCACAAGGCATCCCATGCCTTGTTGTCTCAGCCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCCTTGGGAGAGAGGCTGCCCCTCACTATGTATGCTAATAAACACAGCCCTCTTCTGAGCCTTGGATaGCAGGGAAACCGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FPLGERLPLTMYANKHSPLLSLG*QGNRGG Trigger: TCCTCCTCGGTTTCCCTGGCATCCAAGGCTCAGAAG...AGGGCTGTGTTTATTAGCATACATAGTGAGGGGCAGCCTCTCTCCCAAGGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR GCA 90 bp | GTTTGCTTCTTAGGGGCTCTGCATGCTAAATCTGCAAGTGAGCCTTCACAGTCACTTCTGAGCCTTGGATaGCAGGGAAACCGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VCFLGALHAKSASEPSQSLLSLG*QGNRGG Trigger: TCCTCCTCGGTTTCCCTGGCATCCAAGGCTCAGAAG...TGACTGTGAAGGCTCACTTGCAGATTTAGCATGCAGAGCCCCTAAGAAGCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR CCA 90 bp | TTGGCAAATCCCAAGTTTCCCTTGGGAGAGAGGCTGCCCCTCACTATGTATGCTGTAGTTCCAATATGCTaGTGTCCGCACAGGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LANPKFPLGERLPLTMYAVVPIC*CPHRQL Trigger: AAGCTGCCTGTGCGGACACCAGCATATTGGAACTAC...AGCATACATAGTGAGGGGCAGCCTCTCTCCCAAGGGAAACTTGGGATTTGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR TCA 90 bp | ATAGGGCTGAGACAACAAGGCATGGGATGCCTTGTGCGTGGGGCAGCAAGATACAGCAGGCAGTGCAGATaGCTGTTTTTGATACTACAA | + |
|
Preference number: 4 (lower is better) Translates to: IGLRQQGMGCLVRGAARYSRQCR*LFLILQ Trigger: TTGTAGTATCAAAAACAGTCATCTGCACTGCCTGCT...GTATCTTGCTGCCCCACGCACAAGGCATCCCATGCCTTGTTGTCTCAGCCCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR TCA 90 bp | GTTTGCTTCTTAGGGGCTCTGCATGCTAAATCTGCAAGTGAGCCTTCACAGTCAGACAAAAGACAATGGTaGAGCCTGCTAGCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VCFLGALHAKSASEPSQSDKRQW*SLLARS Trigger: GCTCCTGGCTAGCAGGCTTCACCATTGTCTTTTGTC...TGACTGTGAAGGCTCACTTGCAGATTTAGCATGCAGAGCCCCTAAGAAGCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCAATAGGGCTGAGACAACAAGGCATGGGATGCCTTGTGCGTGGGGCAGCAGGATCCGTAGGATGGTaGATAAGATGTAGATGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KAIGLRQQGMGCLVRGAAGSVGW*IRCRCK Trigger: CTTACATCTACATCTTATCCACCATCCTACGGATCC...TGCTGCCCCACGCACAAGGCATCCCATGCCTTGTTGTCTCAGCCCTATTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCAATAGGGCTGAGACAACAAGGCATGGGATGCCTTGTGCGTGGGGCAGCAAAGGGATCCGTAGGATaGTGGATAAGATGTAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: KAIGLRQQGMGCLVRGAAKGSVG*WIRCRC Trigger: ACATCTACATCTTATCCACCATCCTACGGATCCCTT...TGCTGCCCCACGCACAAGGCATCCCATGCCTTGTTGTCTCAGCCCTATTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR CCA 90 bp | CATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAACCTTTTGGCGGCCAGTaGCTGAAGGGATCCGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HGPSFHLSSKLCLCNSFQPFGGQ*LKGSVG Trigger: TCCTACGGATCCCTTCAGCCACTGGCCGCCAAAAGG...TTGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| 3UTR CAA 72 bp | GCCAGCTTGTTTTCCTTGGCAAATCCCAAGTTTCCCTaGGGAGAGAGGCTGCCCCTCACTATGTATGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: ASLFSLANPKFP*GERLPLTMYAN Trigger: ATTAGCATACATAGTGAGGGGCAGCCTCTCTCCCAAGGGAAACTTGGGATTTGCCAAGGAAAACAAGCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR TCA 90 bp | TTGGCAAATCCCAAGTTTCCCTTGGGAGAGAGGCTGCCCCTCACTATGTATGCTAGCAGGCAGTGCAGATaGCTGTTTTTGATACTACAA | + |
|
Preference number: 4 (lower is better) Translates to: LANPKFPLGERLPLTMYASRQCR*LFLILQ Trigger: TTGTAGTATCAAAAACAGTCATCTGCACTGCCTGCT...AGCATACATAGTGAGGGGCAGCCTCTCTCCCAAGGGAAACTTGGGATTTGCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR TCA 90 bp | CATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAAGACAAAAGACAATGGTaGAGCCTGCTAGCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HGPSFHLSSKLCLCNSFQDKRQW*SLLARS Trigger: GCTCCTGGCTAGCAGGCTTCACCATTGTCTTTTGTC...TTGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR TCA 90 bp | GTCCTGCAGCCCCCTATGGCTGTAACAGCTTCCTCATTCCTAGCCCCTTATTCTACAATCAGCATTGTCTaGCAAAAGACAATGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLQPPMAVTASSFLAPYSTISIV*QKTMVK Trigger: CTTCACCATTGTCTTTTGTCAGACAATGCTGATTGT...AGAATAAGGGGCTAGGAATGAGGAAGCTGTTACAGCCATAGGGGGCTGCAGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR TCA 90 bp | CATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAAGATGGTGAAGAGGAGTaGCCCTGGGATCACGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HGPSFHLSSKLCLCNSFQDGEEE*PWDHEN Trigger: ATTCTCGTGATCCCAGGGTCACTCCTCTTCACCATC...TTGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCCTTGGGAGAGAGGCTGCCCCTCACTATGTATGCTAATAAACACAGCCCTGAATCAAGAACTCAGTaGTACCCAGGAAGAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FPLGERLPLTMYANKHSPESRTQ*YPGRSG Trigger: TCCACTTCTTCCTGGGTACCACTGAGTTCTTGATTC...AGGGCTGTGTTTATTAGCATACATAGTGAGGGGCAGCCTCTCTCCCAAGGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR CCA 90 bp | CCTTGGGAGAGAGGCTGCCCCTCACTATGTATGCTAATAAACACAGCCCTGTTTGAATCAAGAACTCAGTaGTACCCAGGAAGAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PWERGCPSLCMLINTALFESRTQ*YPGRSG Trigger: TCCACTTCTTCCTGGGTACCACTGAGTTCTTGATTC...AAACAGGGCTGTGTTTATTAGCATACATAGTGAGGGGCAGCCTCTCTCCCAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR TCA 90 bp | TTGGCAAATCCCAAGTTTCCCTTGGGAGAGAGGCTGCCCCTCACTATGTATGCTACAATCAGCATTGTCTaGCAAAAGACAATGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LANPKFPLGERLPLTMYATISIV*QKTMVK Trigger: CTTCACCATTGTCTTTTGTCAGACAATGCTGATTGT...AGCATACATAGTGAGGGGCAGCCTCTCTCCCAAGGGAAACTTGGGATTTGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR GCA 90 bp | GTTTGCTTCTTAGGGGCTCTGCATGCTAAATCTGCAAGTGAGCCTTCACAGTCAAGCGGTCAAAAGACATaGTGCCCAGAATCAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: VCFLGALHAKSASEPSQSSGQKT*CPESRT Trigger: AGTTCTTGATTCTGGGCAGCATGTCTTTTGACCGCT...TGACTGTGAAGGCTCACTTGCAGATTTAGCATGCAGAGCCCCTAAGAAGCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR CCA 90 bp | GTTTGCTTCTTAGGGGCTCTGCATGCTAAATCTGCAAGTGAGCCTTCACAGTCAGAATCAAGAACTCAGTaGTACCCAGGAAGAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VCFLGALHAKSASEPSQSESRTQ*YPGRSG Trigger: TCCACTTCTTCCTGGGTACCACTGAGTTCTTGATTC...TGACTGTGAAGGCTCACTTGCAGATTTAGCATGCAGAGCCCCTAAGAAGCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCCTTGGGAGAGAGGCTGCCCCTCACTATGTATGCTAATAAACACAGCCCTGGATCCGTAGGATGGTaGATAAGATGTAGATGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FPLGERLPLTMYANKHSPGSVGW*IRCRCK Trigger: CTTACATCTACATCTTATCCACCATCCTACGGATCC...AGGGCTGTGTTTATTAGCATACATAGTGAGGGGCAGCCTCTCTCCCAAGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCAGTGGTAAAACAGGATTCCTATGAGATTACAGATGACTTTGTTAAGCCTCTTCTGAGCCTTGGATaGCAGGGAAACCGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSVVKQDSYEITDDFVKPLLSLG*QGNRGG Trigger: TCCTCCTCGGTTTCCCTGGCATCCAAGGCTCAGAAG...AGGCTTAACAAAGTCATCTGTAATCTCATAGGAATCCTGTTTTACCACTGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS-3UTR GCA 90 bp | ACCTTTGTCATACTCTTCTACAGGTTTGCCTCACTGTCAGCCCTTGCATTAGCAAGCGGTCAAAAGACATaGTGCCCAGAATCAAGAACT | + |
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Preference number: 4 (lower is better) Translates to: TFVILFYRFASLSALALASGQKT*CPESRT Trigger: AGTTCTTGATTCTGGGCAGCATGTCTTTTGACCGCT...TGCTAATGCAAGGGCTGACAGTGAGGCAAACCTGTAGAAGAGTATGACAAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS-3UTR TCA 90 bp | ACCTTTGTCATACTCTTCTACAGGTTTGCCTCACTGTCAGCCCTTGCATTAGCAAGCAGGCAGTGCAGATaGCTGTTTTTGATACTACAA | + |
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Preference number: 4 (lower is better) Translates to: TFVILFYRFASLSALALASRQCR*LFLILQ Trigger: TTGTAGTATCAAAAACAGTCATCTGCACTGCCTGCT...TGCTAATGCAAGGGCTGACAGTGAGGCAAACCTGTAGAAGAGTATGACAAAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS-3UTR CCA 90 bp | TCATACAGCCTGTTTCTGAGTGTATGTGTTCAATTTAATACCGAAAGGAATGTACCTTTTGGCGGCCAGTaGCTGAAGGGATCCGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: SYSLFLSVCVQFNTERNVPFGGQ*LKGSVG Trigger: TCCTACGGATCCCTTCAGCCACTGGCCGCCAAAAGG...TACATTCCTTTCGGTATTAAATTGAACACATACACTCAGAAACAGGCTGTATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS-3UTR TCA 90 bp | ACCTTTGTCATACTCTTCTACAGGTTTGCCTCACTGTCAGCCCTTGCATTAGCAACAATCAGCATTGTCTaGCAAAAGACAATGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: TFVILFYRFASLSALALATISIV*QKTMVK Trigger: CTTCACCATTGTCTTTTGTCAGACAATGCTGATTGT...TGCTAATGCAAGGGCTGACAGTGAGGCAAACCTGTAGAAGAGTATGACAAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS-3UTR TCA 90 bp | TCATACAGCCTGTTTCTGAGTGTATGTGTTCAATTTAATACCGAAAGGAATGTAGATGGTGAAGAGGAGTaGCCCTGGGATCACGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: SYSLFLSVCVQFNTERNVDGEEE*PWDHEN Trigger: ATTCTCGTGATCCCAGGGTCACTCCTCTTCACCATC...TACATTCCTTTCGGTATTAAATTGAACACATACACTCAGAAACAGGCTGTATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS-3UTR CCA 90 bp | CATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAAATTGTTGCCACAGAATaGCAACTGTACAATCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: HGPSFHLSSKLCLCNSFQIVATE*QLYNQH Trigger: ATGCTGATTGTACAGTTGCCATTCTGTGGCAACAAT...TTGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS-3UTR CCA 90 bp | TCTTCCTGCTGCTGCATAAATCTAACAGTTATCAATAAACGAGGGAAACAGGATAAGGGATCCGTAGGATaGTGGATAAGATGTAGATGT | + |
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Preference number: 4 (lower is better) Translates to: SSCCCINLTVINKRGKQDKGSVG*WIRCRC Trigger: ACATCTACATCTTATCCACCATCCTACGGATCCCTT...ATCCTGTTTCCCTCGTTTATTGATAACTGTTAGATTTATGCAGCAGCAGGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS-3UTR CCA 90 bp | TCTTCCTGCTGCTGCATAAATCTAACAGTTATCAATAAACGAGGGAAACAGGATATTGTTGCCACAGAATaGCAACTGTACAATCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: SSCCCINLTVINKRGKQDIVATE*QLYNQH Trigger: ATGCTGATTGTACAGTTGCCATTCTGTGGCAACAAT...ATCCTGTTTCCCTCGTTTATTGATAACTGTTAGATTTATGCAGCAGCAGGAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS-3UTR CCA 90 bp | TCATACAGCCTGTTTCTGAGTGTATGTGTTCAATTTAATACCGAAAGGAATGTAGGATCCGTAGGATGGTaGATAAGATGTAGATGTAAG | + |
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Preference number: 4 (lower is better) Translates to: SYSLFLSVCVQFNTERNVGSVGW*IRCRCK Trigger: CTTACATCTACATCTTATCCACCATCCTACGGATCC...TACATTCCTTTCGGTATTAAATTGAACACATACACTCAGAAACAGGCTGTATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS GCA 90 bp | CTGGGATCACGAGAATCGTTGCCAGGAGACCCAGTAGTTCCAATATaGTGGTGTCCGCACAGGCAGCTTTCAAGATGGGACCCACGTCAC | + |
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Preference number: 5 (lower is better) Translates to: LGSRESLPGDPVVPI*WCPHRQLSRWDPRH Trigger: GTGACGTGGGTCCCATCTTGAAAGCTGCCTGTGCGGACACCAGCATATTGGAACTACTGGGTCTCCTGGCAACGATTCTCGTGATCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062229.6 ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS CCA 90 bp | GGATCACGAGAATCGTTGCCAGGAGACCCAGTAGTTCCAATATGCTaGTGTCCGCACAGGCAGCTTTCAAGATGGGACCCACGTCACAGT | + |
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Preference number: 5 (lower is better) Translates to: GSRESLPGDPVVPIC*CPHRQLSRWDPRHS Trigger: ACTGTGACGTGGGTCCCATCTTGAAAGCTGCCTGTGCGGACACCAGCATATTGGAACTACTGGGTCTCCTGGCAACGATTCTCGTGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062229.6 ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS-3UTR CAA 90 bp | GTCCTGCAGCCCCCTATGGCTGTAACAGCTTCCTCATTCCTAGCCCCTTATTCTAGCTGTAGGCAGAGATaGCTGGTCATAATGGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: VLQPPMAVTASSFLAPYSSCRQR*LVIMVG Trigger: CCCAACCATTATGACCAGCAATCTCTGCCTACAGCT...AGAATAAGGGGCTAGGAATGAGGAAGCTGTTACAGCCATAGGGGGCTGCAGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS-3UTR CAA 90 bp | TTTCCCTTGGGAGAGAGGCTGCCCCTCACTATGTATGCTAATAAACACAGCCCTAGCTGTAGGCAGAGATaGCTGGTCATAATGGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: FPLGERLPLTMYANKHSPSCRQR*LVIMVG Trigger: CCCAACCATTATGACCAGCAATCTCTGCCTACAGCT...AGGGCTGTGTTTATTAGCATACATAGTGAGGGGCAGCCTCTCTCCCAAGGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS-3UTR CAA 90 bp | CCTTGGGAGAGAGGCTGCCCCTCACTATGTATGCTAATAAACACAGCCCTGTTTAAAGTACATTGGAGTTaGAAGCCTGGGCTCAACCCA | + |
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Preference number: 5 (lower is better) Translates to: PWERGCPSLCMLINTALFKVHWS*KPGLNP Trigger: TGGGTTGAGCCCAGGCTTCAAACTCCAATGTACTTT...AAACAGGGCTGTGTTTATTAGCATACATAGTGAGGGGCAGCCTCTCTCCCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS-3UTR CAA 90 bp | TTGGCAAATCCCAAGTTTCCCTTGGGAGAGAGGCTGCCCCTCACTATGTATGCTACTGTACAATCAGCATaGTCTGACAAAAGACAATGG | + |
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Preference number: 5 (lower is better) Translates to: LANPKFPLGERLPLTMYATVQSA*SDKRQW Trigger: CCATTGTCTTTTGTCAGACAATGCTGATTGTACAGT...AGCATACATAGTGAGGGGCAGCCTCTCTCCCAAGGGAAACTTGGGATTTGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS-3UTR CAA 90 bp | TTTCCCTTGGGAGAGAGGCTGCCCCTCACTATGTATGCTAATAAACACAGCCCTACAATAATGAGTCCATaGCCCGAAAGGGTTAATATG | + |
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Preference number: 5 (lower is better) Translates to: FPLGERLPLTMYANKHSPTIMSP*PERVNM Trigger: CATATTAACCCTTTCGGGCAATGGACTCATTATTGT...AGGGCTGTGTTTATTAGCATACATAGTGAGGGGCAGCCTCTCTCCCAAGGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS-3UTR CAA 90 bp | GTTTGCTTCTTAGGGGCTCTGCATGCTAAATCTGCAAGTGAGCCTTCACAGTCAACAATAATGAGTCCATaGCCCGAAAGGGTTAATATG | + |
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Preference number: 5 (lower is better) Translates to: VCFLGALHAKSASEPSQSTIMSP*PERVNM Trigger: CATATTAACCCTTTCGGGCAATGGACTCATTATTGT...TGACTGTGAAGGCTCACTTGCAGATTTAGCATGCAGAGCCCCTAAGAAGCAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS-3UTR CAA 90 bp | GTTTGCTTCTTAGGGGCTCTGCATGCTAAATCTGCAAGTGAGCCTTCACAGTCAACTGTACAATCAGCATaGTCTGACAAAAGACAATGG | + |
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Preference number: 5 (lower is better) Translates to: VCFLGALHAKSASEPSQSTVQSA*SDKRQW Trigger: CCATTGTCTTTTGTCAGACAATGCTGATTGTACAGT...TGACTGTGAAGGCTCACTTGCAGATTTAGCATGCAGAGCCCCTAAGAAGCAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS-3UTR CAA 90 bp | AACCAGAAATGGAATTCTCCAACAAGGCTTTCAGTGATATTAGCTCTGAGGCATAAAGTACATTGGAGTTaGAAGCCTGGGCTCAACCCA | + |
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Preference number: 5 (lower is better) Translates to: NQKWNSPTRLSVILALRHKVHWS*KPGLNP Trigger: TGGGTTGAGCCCAGGCTTCAAACTCCAATGTACTTT...ATGCCTCAGAGCTAATATCACTGAAAGCCTTGTTGGAGAATTCCATTTCTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS-3UTR CAA 90 bp | CATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAAACTGTACAATCAGCATaGTCTGACAAAAGACAATGG | + |
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Preference number: 5 (lower is better) Translates to: HGPSFHLSSKLCLCNSFQTVQSA*SDKRQW Trigger: CCATTGTCTTTTGTCAGACAATGCTGATTGTACAGT...TTGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS-3UTR CAA 90 bp | TCTTCCTGCTGCTGCATAAATCTAACAGTTATCAATAAACGAGGGAAACAGGATACAATAATGAGTCCATaGCCCGAAAGGGTTAATATG | + |
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Preference number: 5 (lower is better) Translates to: SSCCCINLTVINKRGKQDTIMSP*PERVNM Trigger: CATATTAACCCTTTCGGGCAATGGACTCATTATTGT...ATCCTGTTTCCCTCGTTTATTGATAACTGTTAGATTTATGCAGCAGCAGGAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS GCA 72 bp | CGAGAATCGTTGCCAGGAGACCCAGTAGTTCCAATATaGTGGTGTCCGCACAGGCAGCTTTCAAGATGGGAC | + |
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Preference number: 6 (lower is better) Translates to: RESLPGDPVVPI*WCPHRQLSRWD Trigger: GTCCCATCTTGAAAGCTGCCTGTGCGGACACCAGCATATTGGAACTACTGGGTCTCCTGGCAACGATTCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062229.6 ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS CCA 72 bp | GAATCGTTGCCAGGAGACCCAGTAGTTCCAATATGCTaGTGTCCGCACAGGCAGCTTTCAAGATGGGACCCA | + |
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Preference number: 6 (lower is better) Translates to: ESLPGDPVVPIC*CPHRQLSRWDP Trigger: TGGGTCCCATCTTGAAAGCTGCCTGTGCGGACACCAGCATATTGGAACTACTGGGTCTCCTGGCAACGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062229.6 ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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| CDS TCA 72 bp | TTGCCACAGAATGGCAACTGTACAATCAGCATTGTCTaGCAAAAGACAATGGTGAAGCCTGCTAGCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LPQNGNCTISIV*QKTMVKPASQE Trigger: CTCCTGGCTAGCAGGCTTCACCATTGTCTTTTGTCAGACAATGCTGATTGTACAGTTGCCATTCTGTGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062229.6 ENSMUST00000214763.2 ENSMUST00000216720.2 ENSMUST00000218134.2 |
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