Pregenerated sensors for OLFR985 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049073Ensembl transcript IDs: ENSMUST00000214981.3
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGCCAGATACCGACTAGTCTCATTGAGGTCAGATCACTTGATCCTTTGCTTAATTATAAATTTTTACAGTaGCTTCTGTCACCGGACACA | + |
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Preference number: 2 (lower is better) Translates to: SQIPTSLIEVRSLDPLLNYKFLQ*LLSPDT Trigger: TGTGTCCGGTGACAGAAGTCACTGTAAAAATTTATA...ATTAAGCAAAGGATCAAGTGATCTGACCTCAATGAGACTAGTCGGTATCTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214981.3 |
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| 3UTR-3UTR GCA 90 bp | ATAGCCAGATACCGACTAGTCTCATTGAGGTCAGATCACTTGATCCTTTGCTTACACACCCAAACTTCCTaGACATTTGCTATAAATTTT | + |
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Preference number: 2 (lower is better) Translates to: IARYRLVSLRSDHLILCLHTQTS*TFAINF Trigger: AAAATTTATAGCAAATGTGCAGGAAGTTTGGGTGTG...TAAGCAAAGGATCAAGTGATCTGACCTCAATGAGACTAGTCGGTATCTGGCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214981.3 |
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| 3UTR-3UTR CAA 90 bp | ATAGCCAGATACCGACTAGTCTCATTGAGGTCAGATCACTTGATCCTTTGCTTACCAGCTCAGATTGCTTaGAAGGAGTCAAAGTATATA | + |
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Preference number: 3 (lower is better) Translates to: IARYRLVSLRSDHLILCLPAQIA*KESKYI Trigger: TATATACTTTGACTCCTTCAAAGCAATCTGAGCTGG...TAAGCAAAGGATCAAGTGATCTGACCTCAATGAGACTAGTCGGTATCTGGCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214981.3 |
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| 3UTR-3UTR CAA 90 bp | CAGATACCGACTAGTCTCATTGAGGTCAGATCACTTGATCCTTTGCTTAATCATGTAGGACACTGTAGTTaGTTGTTGTTGTTGTTGTTT | + |
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Preference number: 3 (lower is better) Translates to: QIPTSLIEVRSLDPLLNHVGHCS*LLLLLF Trigger: AAACAACAACAACAACAACAAACTACAGTGTCCTAC...ATGATTAAGCAAAGGATCAAGTGATCTGACCTCAATGAGACTAGTCGGTATCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214981.3 |
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| 3UTR TCA 72 bp | CCAAACTTCCTGCACATTTGCTATAAATTTTTACAGTaGCTTCTGTCACCGGACACATTTTTGTTTGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: PNFLHICYKFLQ*LLSPDTFLFGF Trigger: AAAACCAAACAAAAATGTGTCCGGTGACAGAAGTCACTGTAAAAATTTATAGCAAATGTGCAGGAAGTTTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214981.3 |
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| CDS-3UTR GCA 90 bp | ATAGCCAGATACCGACTAGTCTCATTGAGGTCAGATCACTTGATCCTTTGCTTAGTTCGTCAATGTAAGTaGTGGAGCAGGAGAGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: IARYRLVSLRSDHLILCLVRQCK*WSRRVE Trigger: TTCAACTCTCCTGCTCCAGCACTTACATTGACGAAC...TAAGCAAAGGATCAAGTGATCTGACCTCAATGAGACTAGTCGGTATCTGGCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214981.3 |
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| CDS-3UTR TCA 90 bp | ATAGCCAGATACCGACTAGTCTCATTGAGGTCAGATCACTTGATCCTTTGCTTAGATTTCCCACCATTGTaGCTATGTAAATCCCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: IARYRLVSLRSDHLILCLDFPPL*LCKSPR Trigger: TCTTGGGGATTTACATAGTCACAATGGTGGGAAATC...TAAGCAAAGGATCAAGTGATCTGACCTCAATGAGACTAGTCGGTATCTGGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214981.3 |
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| CDS-3UTR GCA 90 bp | CAGATACCGACTAGTCTCATTGAGGTCAGATCACTTGATCCTTTGCTTAATCATGTTCAGCTTGATGACTaGAATCATGCCAAGATTTCC | + |
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Preference number: 4 (lower is better) Translates to: QIPTSLIEVRSLDPLLNHVQLDD*NHAKIS Trigger: GGAAATCTTGGCATGATTGCAGTCATCAAGCTGAAC...ATGATTAAGCAAAGGATCAAGTGATCTGACCTCAATGAGACTAGTCGGTATCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214981.3 |
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| CDS-3UTR TCA 90 bp | CAGATACCGACTAGTCTCATTGAGGTCAGATCACTTGATCCTTTGCTTAATCATCAGAAAAAGAACAGCTaGGCCATACAATCAGAATAC | + |
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Preference number: 4 (lower is better) Translates to: QIPTSLIEVRSLDPLLNHQKKNS*AIQSEY Trigger: GTATTCTGATTGTATGGCTCAGCTGTTCTTTTTCTG...ATGATTAAGCAAAGGATCAAGTGATCTGACCTCAATGAGACTAGTCGGTATCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214981.3 |
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| CDS-3UTR TCA 90 bp | ATAGCCAGATACCGACTAGTCTCATTGAGGTCAGATCACTTGATCCTTTGCTTAAAGATATTTTTCTTCTaGCAAGCTTCACCAGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: IARYRLVSLRSDHLILCLKIFFF*QASPVH Trigger: ATGCACTGGTGAAGCTTGTCAGAAGAAAAATATCTT...TAAGCAAAGGATCAAGTGATCTGACCTCAATGAGACTAGTCGGTATCTGGCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214981.3 |
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| CDS-3UTR CAA 90 bp | ATAGCCAGATACCGACTAGTCTCATTGAGGTCAGATCACTTGATCCTTTGCTTACATGGGGGTATGAAGTaGAGAGTTCAGCTTGATGAC | + |
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Preference number: 5 (lower is better) Translates to: IARYRLVSLRSDHLILCLHGGMK*RVQLDD Trigger: GTCATCAAGCTGAACTCTCAACTTCATACCCCCATG...TAAGCAAAGGATCAAGTGATCTGACCTCAATGAGACTAGTCGGTATCTGGCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214981.3 |
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| CDS-3UTR CAA 90 bp | CAGATACCGACTAGTCTCATTGAGGTCAGATCACTTGATCCTTTGCTTAATCATGCTGGAGCAGGAGAGTaGAATAAGTGGAACAATGTC | + |
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Preference number: 5 (lower is better) Translates to: QIPTSLIEVRSLDPLLNHAGAGE*NKWNNV Trigger: GACATTGTTCCACTTATTCAACTCTCCTGCTCCAGC...ATGATTAAGCAAAGGATCAAGTGATCTGACCTCAATGAGACTAGTCGGTATCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214981.3 |
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