Pregenerated sensors for OLFR982 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049010Ensembl transcript IDs: ENSMUST00000054051.5
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGCATTTCCAAGAGGTAATTGTTTAACAGGACCGAGGGAGGTGTaGGATGGAACCAAGGCTGGTTTTGGCACTGTCTCCACTCTATAC | + |
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Preference number: 1 (lower is better) Translates to: VAFPRGNCLTGPREV*DGTKAGFGTVSTLY Trigger: GTATAGAGTGGAGACAGTGCCAAAACCAGCCTTGGTTCCATCCCACACCTCCCTCGGTCCTGTTAAACAATTACCTCTTGGAAATGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CCA 90 bp | GTGGAGAAAGAGGACCACTCCTCCATTGTTGGTGGGATTGCAAGCTaGTACAACCACTCTGGAAATCGGTTTGGCAGTTCCTCAGAAAAT | + |
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Preference number: 1 (lower is better) Translates to: VEKEDHSSIVGGIAS*YNHSGNRFGSSSEN Trigger: ATTTTCTGAGGAACTGCCAAACCGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACAATGGAGGAGTGGTCCTCTTTCTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CCA 90 bp | CCACTCCTCCATTGTTGGTGGGATTGCAAGCTGGTACAACCACTCTaGAAATCGGTTTGGCAGTTCCTCAGAAAATTGGACATAGTACTA | + |
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Preference number: 1 (lower is better) Translates to: PLLHCWWDCKLVQPL*KSVWQFLRKLDIVL Trigger: TAGTACTATGTCCAATTTTCTGAGGAACTGCCAAACCGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACAATGGAGGAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR GCA 90 bp | GGTTTTGGCACTGTCTCCACTCTATACTCAGTCTGTGTTGAAGCCTaGTTTGATGGGAATGACAAAGTTGCCCCAGTTAAGTTCATCCTA | + |
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Preference number: 1 (lower is better) Translates to: GFGTVSTLYSVCVEA*FDGNDKVAPVKFIL Trigger: TAGGATGAACTTAACTGGGGCAACTTTGTCATTCCCATCAAAGCAGGCTTCAACACAGACTGAGTATAGAGTGGAGACAGTGCCAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CCA 90 bp | CTTCCATGGTACATTTTATGTAGCCCAGCAATGGCCAACTCACTTTaGAAAGGTGAAGAATTCGCAAATGCCCAGTTCATGAGGCTAGAC | + |
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Preference number: 1 (lower is better) Translates to: LPWYILCSPAMANSL*KGEEFANAQFMRLD Trigger: GTCTAGCCTCATGAACTGGGCATTTGCGAATTCTTCACCTTTCCAAAGTGAGTTGGCCATTGCTGGGCTACATAAAATGTACCATGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR TCA 90 bp | AAAGTTTCCCCATCTTTAAGTAGAAAGGAAAATAAGGATGTCCAGTaGAATGTACTCTCGATGAGCAGCAGTATAGCTAATGCAGTCATC | + |
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Preference number: 1 (lower is better) Translates to: KVSPSLSRKENKDVQ*NVLSMSSSIANAVI Trigger: GATGACTGCATTAGCTATACTGCTGCTCATCGAGAGTACATTTCACTGGACATCCTTATTTTCCTTTCTACTTAAAGATGGGGAAACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CCA 90 bp | AAAGTCACTTCTCTAGTCTGCATTTTAAGGATGAAGAATTTGTTATaGAGATACAGAGGCAGCCAAAAGAGAAGAACATGTGGTCCAGTT | + |
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Preference number: 1 (lower is better) Translates to: KVTSLVCILRMKNLL*RYRGSQKRRTCGPV Trigger: AACTGGACCACATGTTCTTCTCTTTTGGCTGCCTCTGTATCTCCATAACAAATTCTTCATCCTTAAAATGCAGACTAGAGAAGTGACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR GCA 90 bp | ACCTTGAAAACAAAGACCACTGGCATATTTATCATCAGTGCCAATTaGTGCTACTCAATTATTAGCATCATAATTTCCTTCACGTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: TLKTKTTGIFIISAN*CYSIISIIISFTCS Trigger: AGAGCACGTGAAGGAAATTATGATGCTAATAATTGAGTAGCAGCAATTGGCACTGATGATAAATATGCCAGTGGTCTTTGTTTTCAAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR TCA 90 bp | TTAATGCACTATTCAGCGGTTTCTGGAAGAAGACAACAGATAGAATaGATACATATTAAAATGGGTTTTGTTAGCTTGGCTTCCATGGTA | + |
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Preference number: 1 (lower is better) Translates to: LMHYSAVSGRRQQIE*IHIKMGFVSLASMV Trigger: TACCATGGAAGCCAAGCTAACAAAACCCATTTTAATATGTATTCATTCTATCTGTTGTCTTCTTCCAGAAACCGCTGAATAGTGCATTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR TCA 90 bp | GTATCTGTCAACACAATCATAACAGCTTATAATAAGCTGATGTCATaGACCGTTTTTAGAGGAAGAGAAGAACTCAAGAAATGGAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: VSVNTIITAYNKLMS*TVFRGREELKKWKD Trigger: ATCCTTCCATTTCTTGAGTTCTTCTCTTCCTCTAAAAACGGTTCATGACATCAGCTTATTATAAGCTGTTATGATTGTGTTGACAGATAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 90 bp | CTGGTACAACCACTCTGGAAATCGGTTTGGCAGTTCCTCAGAAAATaGGACATAGTACTACAGGAAGATCCAGCAATACCTCTCCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LVQPLWKSVWQFLRK*DIVLQEDPAIPLLG Trigger: GCCCAGGAGAGGTATTGCTGGATCTTCCTGTAGTACTATGTCCAATTTTCTGAGGAACTGCCAAACCGATTTCCAGAGTGGTTGTACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 90 bp | CCAAGGCTGGTTTTGGCACTGTCTCCACTCTATACTCAGTCTGTGTaGAAGCCTGCTTTGATGGGAATGACAAAGTTGCCCCAGTTAAGT | + |
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Preference number: 2 (lower is better) Translates to: PRLVLALSPLYTQSV*KPALMGMTKLPQLS Trigger: ACTTAACTGGGGCAACTTTGTCATTCCCATCAAAGCAGGCTTCAACACAGACTGAGTATAGAGTGGAGACAGTGCCAAAACCAGCCTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 90 bp | TATGGAGATACAGAGGCAGCCAAAAGAGAAGAACATGTGGTCCAGTaGACACTCACTACTTTCCTCCTTAAAGTAGGACCTGAGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: YGDTEAAKREEHVVQ*TLTTFLLKVGPEWL Trigger: CAGCCACTCAGGTCCTACTTTAAGGAGGAAAGTAGTGAGTGTCAACTGGACCACATGTTCTTCTCTTTTGGCTGCCTCTGTATCTCCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 90 bp | TTGGCACTGTCTCCACTCTATACTCAGTCTGTGTTGAAGCCTGCTTaGATGGGAATGACAAAGTTGCCCCAGTTAAGTTCATCCTACAGT | + |
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Preference number: 2 (lower is better) Translates to: LALSPLYTQSVLKPA*MGMTKLPQLSSSYS Trigger: ACTGTAGGATGAACTTAACTGGGGCAACTTTGTCATTCCCATCAAAGCAGGCTTCAACACAGACTGAGTATAGAGTGGAGACAGTGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR-3UTR TCA 90 bp | CTCTATACTCAGTCTGTGTTGAAGCCTGCTTTGATGGGAATGACAAAGTTGCCCCTCACTTTGGAAAGGTaGAGAATTCGCAAATGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LYTQSVLKPALMGMTKLPLTLER*RIRKCP Trigger: TGGGCATTTGCGAATTCTTCACCTTTCCAAAGTGAG...GGGCAACTTTGTCATTCCCATCAAAGCAGGCTTCAACACAGACTGAGTATAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR-3UTR CCA 90 bp | ACTCTATACTCAGTCTGTGTTGAAGCCTGCTTTGATGGGAATGACAAAGTTGCCGGTGGGATTGCAAGCTaGTACAACCACTCTGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: TLYSVCVEACFDGNDKVAGGIAS*YNHSGN Trigger: ATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACC...GGCAACTTTGTCATTCCCATCAAAGCAGGCTTCAACACAGACTGAGTATAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR-3UTR TCA 90 bp | ACTCTATACTCAGTCTGTGTTGAAGCCTGCTTTGATGGGAATGACAAAGTTGCCTGGCTGAGAAGCACCTaGAAAATTGTTCAACATCCT | + |
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Preference number: 2 (lower is better) Translates to: TLYSVCVEACFDGNDKVAWLRST*KIVQHP Trigger: AGGATGTTGAACAATTTTTCAGGTGCTTCTCAGCCA...GGCAACTTTGTCATTCCCATCAAAGCAGGCTTCAACACAGACTGAGTATAGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR-3UTR TCA 90 bp | ACTCTATACTCAGTCTGTGTTGAAGCCTGCTTTGATGGGAATGACAAAGTTGCCAGCTTGTGGGTTCATTaGCTCCACATTCAATCAAGT | + |
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Preference number: 2 (lower is better) Translates to: TLYSVCVEACFDGNDKVASLWVH*LHIQSS Trigger: ACTTGATTGAATGTGGAGTCAATGAACCCACAAGCT...GGCAACTTTGTCATTCCCATCAAAGCAGGCTTCAACACAGACTGAGTATAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 90 bp | GGAAGATCCAGCAATACCTCTCCTGGGCATATAACCAGAATCGTGTaGGATCTGTCACTTTGTTATCTAGAAAATTCTGTTCCTCTCATT | + |
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Preference number: 2 (lower is better) Translates to: GRSSNTSPGHITRIV*DLSLCYLENSVPLI Trigger: AATGAGAGGAACAGAATTTTCTAGATAACAAAGTGACAGATCCAACACGATTCTGGTTATATGCCCAGGAGAGGTATTGCTGGATCTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR-3UTR GCA 90 bp | CTCTATACTCAGTCTGTGTTGAAGCCTGCTTTGATGGGAATGACAAAGTTGCCCAAACTTCTGTGTAGATaGTACTGCTTAACTGCATTT | + |
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Preference number: 2 (lower is better) Translates to: LYTQSVLKPALMGMTKLPKLLCR*YCLTAF Trigger: AAATGCAGTTAAGCAGTAGCATCTACACAGAAGTTT...GGGCAACTTTGTCATTCCCATCAAAGCAGGCTTCAACACAGACTGAGTATAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR-3UTR CCA 90 bp | AGAATTTATTTCTCAACTGAGGAATATCGAATGGCTGAGAAGCACCTGAAAAATATGCTGGTGAGGATGTaGAGAAAGAGGACCACTCCT | + |
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Preference number: 2 (lower is better) Translates to: RIYFSTEEYRMAEKHLKNMLVRM*RKRTTP Trigger: AGGAGTGGTCCTCTTTCTCCACATCCTCACCAGCAT...ATTTTTCAGGTGCTTCTCAGCCATTCGATATTCCTCAGTTGAGAAATAAATTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 90 bp | TACCTCTCCTGGGCATATAACCAGAATCGTGTTGGATCTGTCACTTaGTTATCTAGAAAATTCTGTTCCTCTCATTGTTCACCAATGGAA | + |
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Preference number: 2 (lower is better) Translates to: YLSWAYNQNRVGSVT*LSRKFCSSHCSPME Trigger: TTCCATTGGTGAACAATGAGAGGAACAGAATTTTCTAGATAACAAAGTGACAGATCCAACACGATTCTGGTTATATGCCCAGGAGAGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR-3UTR GCA 90 bp | GTAAAAATCAATGCTTCCAGTCTTATCTTTGTGTCCTTTCATCCGGGCTGCCACGTCACTTCTCTAGTCTaGATTTTAAGGATGAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: VKINASSLIFVSFHPGCHVTSLV*ILRMKN Trigger: ATTCTTCATCCTTAAAATGCAGACTAGAGAAGTGAC...GTGGCAGCCCGGATGAAAGGACACAAAGATAAGACTGGAAGCATTGATTTTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR-3UTR GCA 90 bp | ACTCTATACTCAGTCTGTGTTGAAGCCTGCTTTGATGGGAATGACAAAGTTGCCAAGGAATGTAGCATTTaGAACAACAGAGTAGATGAA | + |
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Preference number: 2 (lower is better) Translates to: TLYSVCVEACFDGNDKVAKECSI*NNRVDE Trigger: TTCATCTACTCTGTTGTTGCAAATGCTACATTCCTT...GGCAACTTTGTCATTCCCATCAAAGCAGGCTTCAACACAGACTGAGTATAGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR-3UTR CCA 90 bp | GTAAAAATCAATGCTTCCAGTCTTATCTTTGTGTCCTTTCATCCGGGCTGCCACTCACACCAGTCAGAATaGCTAAGATTAAAAATTCAG | + |
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Preference number: 2 (lower is better) Translates to: VKINASSLIFVSFHPGCHSHQSE*LRLKIQ Trigger: CTGAATTTTTAATCTTAGCCATTCTGACTGGTGTGA...GTGGCAGCCCGGATGAAAGGACACAAAGATAAGACTGGAAGCATTGATTTTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR-3UTR TCA 90 bp | CTCCTTTTATTACAAACTGGTACAAAAGTCTTACACTTGACTGCAACACTATACTCAGCGGTCTTAATCTaGCTCTATCCCTGGAAGATT | + |
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Preference number: 2 (lower is better) Translates to: LLLLQTGTKVLHLTATLYSAVLI*LYPWKI Trigger: AATCTTCCAGGGATAGAGTCAGATTAAGACCGCTGA...GTATAGTGTTGCAGTCAAGTGTAAGACTTTTGTACCAGTTTGTAATAAAAGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR-3UTR TCA 90 bp | CTCCTTTTATTACAAACTGGTACAAAAGTCTTACACTTGACTGCAACACTATACTATGAACTTCCTAAATaGCGAGGGGAGGGTTTGATT | + |
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Preference number: 2 (lower is better) Translates to: LLLLQTGTKVLHLTATLYYELPK*RGEGLI Trigger: AATCAAACCCTCCCCTCGTCATTTAGGAAGTTCATA...GTATAGTGTTGCAGTCAAGTGTAAGACTTTTGTACCAGTTTGTAATAAAAGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 90 bp | TCCTTTGCTATAGAACATAGCAAAGGAAGCATAGGAGTGCTTTGTTaGGGGCTATTCATACAGAAGAACAGAACAATTAAAGTGATAAAG | + |
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Preference number: 2 (lower is better) Translates to: SFAIEHSKGSIGVLC*GLFIQKNRTIKVIK Trigger: CTTTATCACTTTAATTGTTCTGTTCTTCTGTATGAATAGCCCCAAACAAAGCACTCCTATGCTTCCTTTGCTATGTTCTATAGCAAAGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 90 bp | TTTGATGGGAATGACAAAGTTGCCCCAGTTAAGTTCATCCTACAGTaGTTATCAGTAACTGTTAGATGCAAGAGAGAATACAAAAACTTC | + |
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Preference number: 2 (lower is better) Translates to: FDGNDKVAPVKFILQ*LSVTVRCKREYKNF Trigger: GAAGTTTTTGTATTCTCTCTTGCATCTAACAGTTACTGATAACAACTGTAGGATGAACTTAACTGGGGCAACTTTGTCATTCCCATCAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 90 bp | GGAAACTCGGTTATTTCTAGATCTTCCCATTTCTTAAAGAATACCTaGAAAACAAAGACCACTGGCATATTTATCATCAGTGCCAATTGC | + |
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Preference number: 2 (lower is better) Translates to: GNSVISRSSHFLKNT*KTKTTGIFIISANC Trigger: GCAATTGGCACTGATGATAAATATGCCAGTGGTCTTTGTTTTCAAGGTATTCTTTAAGAAATGGGAAGATCTAGAAATAACCGAGTTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR-3UTR CCA 90 bp | CTCCTTTTATTACAAACTGGTACAAAAGTCTTACACTTGACTGCAACACTATACTTAGCTTGGCTTCCATaGTACATTTTATGTAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LLLLQTGTKVLHLTATLYLAWLP*YILCSP Trigger: TGGGCTACATAAAATGTACCATGGAAGCCAAGCTAA...GTATAGTGTTGCAGTCAAGTGTAAGACTTTTGTACCAGTTTGTAATAAAAGGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CCA 72 bp | GAGGACCACTCCTCCATTGTTGGTGGGATTGCAAGCTaGTACAACCACTCTGGAAATCGGTTTGGCAGTTCC | + |
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Preference number: 3 (lower is better) Translates to: EDHSSIVGGIAS*YNHSGNRFGSS Trigger: GGAACTGCCAAACCGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACAATGGAGGAGTGGTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR GCA 72 bp | GGAGAAAGAGGACCACTCCTCCATTGTTGGTGGGATTaGAAGCTGGTACAACCACTCTGGAAATCGGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: GERGPLLHCWWD*KLVQPLWKSVW Trigger: CCAAACCGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACAATGGAGGAGTGGTCCTCTTTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CCA 72 bp | GGATGTGGAGAAAGAGGACCACTCCTCCATTGTTGGTaGGATTGCAAGCTGGTACAACCACTCTGGAAATCG | + |
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Preference number: 3 (lower is better) Translates to: GCGERGPLLHCW*DCKLVQPLWKS Trigger: CGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACAATGGAGGAGTGGTCCTCTTTCTCCACATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CCA 72 bp | CATTGTTGGTGGGATTGCAAGCTGGTACAACCACTCTaGAAATCGGTTTGGCAGTTCCTCAGAAAATTGGAC | + |
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Preference number: 3 (lower is better) Translates to: HCWWDCKLVQPL*KSVWQFLRKLD Trigger: GTCCAATTTTCTGAGGAACTGCCAAACCGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CCA 72 bp | CTTGGCTTCCATGGTACATTTTATGTAGCCCAGCAATaGCCAACTCACTTTGGAAAGGTGAAGAATTCGCAA | + |
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Preference number: 3 (lower is better) Translates to: LGFHGTFYVAQQ*PTHFGKVKNSQ Trigger: TTGCGAATTCTTCACCTTTCCAAAGTGAGTTGGCCATTGCTGGGCTACATAAAATGTACCATGGAAGCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR-3UTR CAA 90 bp | GTAAAAATCAATGCTTCCAGTCTTATCTTTGTGTCCTTTCATCCGGGCTGCCACAAGCATAGGAGTGCTTaGTTTGGGGCTATTCATACA | + |
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Preference number: 3 (lower is better) Translates to: VKINASSLIFVSFHPGCHKHRSA*FGAIHT Trigger: TGTATGAATAGCCCCAAACAAAGCACTCCTATGCTT...GTGGCAGCCCGGATGAAAGGACACAAAGATAAGACTGGAAGCATTGATTTTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CCA 72 bp | TACATTTTATGTAGCCCAGCAATGGCCAACTCACTTTaGAAAGGTGAAGAATTCGCAAATGCCCAGTTCATG | + |
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Preference number: 3 (lower is better) Translates to: YILCSPAMANSL*KGEEFANAQFM Trigger: CATGAACTGGGCATTTGCGAATTCTTCACCTTTCCAAAGTGAGTTGGCCATTGCTGGGCTACATAAAATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR-3UTR CAA 90 bp | GTAAAAATCAATGCTTCCAGTCTTATCTTTGTGTCCTTTCATCCGGGCTGCCACAAGTGTTGGATAGCCTaGAAAAGTCACTTCTCTAGT | + |
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Preference number: 3 (lower is better) Translates to: VKINASSLIFVSFHPGCHKCWIA*KSHFSS Trigger: ACTAGAGAAGTGACTTTTCAAGGCTATCCAACACTT...GTGGCAGCCCGGATGAAAGGACACAAAGATAAGACTGGAAGCATTGATTTTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR-3UTR CAA 90 bp | CTCTATACTCAGTCTGTGTTGAAGCCTGCTTTGATGGGAATGACAAAGTTGCCCGGAAATAGCAAAACCTaGAGAGTTATCTCATTGAGA | + |
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Preference number: 3 (lower is better) Translates to: LYTQSVLKPALMGMTKLPGNSKT*RVISLR Trigger: TCTCAATGAGATAACTCTCAAGGTTTTGCTATTTCC...GGGCAACTTTGTCATTCCCATCAAAGCAGGCTTCAACACAGACTGAGTATAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR-3UTR CAA 90 bp | GTAAAAATCAATGCTTCCAGTCTTATCTTTGTGTCCTTTCATCCGGGCTGCCACCAGTTCCTCAGAAAATaGGACATAGTACTACAGGAA | + |
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Preference number: 3 (lower is better) Translates to: VKINASSLIFVSFHPGCHQFLRK*DIVLQE Trigger: TTCCTGTAGTACTATGTCCAATTTTCTGAGGAACTG...GTGGCAGCCCGGATGAAAGGACACAAAGATAAGACTGGAAGCATTGATTTTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR TCA 72 bp | GCCTTTATGAACTTCCTAAATGACGAGGGGAGGGTTTaGTTATCTGTAAGGTACTGTCACGTAACAAAAATG | + |
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Preference number: 3 (lower is better) Translates to: AFMNFLNDEGRV*LSVRYCHVTKM Trigger: CATTTTTGTTACGTGACAGTACCTTACAGATAATCAAACCCTCCCCTCGTCATTTAGGAAGTTCATAAAGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR TCA 72 bp | CCATCTTTAAGTAGAAAGGAAAATAAGGATGTCCAGTaGAATGTACTCTCGATGAGCAGCAGTATAGCTAAT | + |
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Preference number: 3 (lower is better) Translates to: PSLSRKENKDVQ*NVLSMSSSIAN Trigger: ATTAGCTATACTGCTGCTCATCGAGAGTACATTTCACTGGACATCCTTATTTTCCTTTCTACTTAAAGATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR-3UTR CAA 90 bp | AGAATTTATTTCTCAACTGAGGAATATCGAATGGCTGAGAAGCACCTGAAAAATATTCTGTTCCTCTCATaGTTCACCAATGGAAATAGC | + |
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Preference number: 3 (lower is better) Translates to: RIYFSTEEYRMAEKHLKNILFLS*FTNGNS Trigger: GCTATTTCCATTGGTGAACAATGAGAGGAACAGAAT...ATTTTTCAGGTGCTTCTCAGCCATTCGATATTCCTCAGTTGAGAAATAAATTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR-3UTR CAA 90 bp | CTCCTTTTATTACAAACTGGTACAAAAGTCTTACACTTGACTGCAACACTATACCAAATCAAAACAACCTaGAGATTCCATCTCACACCA | + |
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Preference number: 3 (lower is better) Translates to: LLLLQTGTKVLHLTATLYQIKTT*RFHLTP Trigger: TGGTGTGAGATGGAATCTCAAGGTTGTTTTGATTTG...GTATAGTGTTGCAGTCAAGTGTAAGACTTTTGTACCAGTTTGTAATAAAAGGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR-3UTR CAA 90 bp | CTCCTTTTATTACAAACTGGTACAAAAGTCTTACACTTGACTGCAACACTATACATATTAAAATGGGTTTaGTTAGCTTGGCTTCCATGG | + |
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Preference number: 3 (lower is better) Translates to: LLLLQTGTKVLHLTATLYILKWV*LAWLPW Trigger: CCATGGAAGCCAAGCTAACAAAACCCATTTTAATAT...GTATAGTGTTGCAGTCAAGTGTAAGACTTTTGTACCAGTTTGTAATAAAAGGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR TCA 72 bp | GTAAGGTACTGTCACGTAACAAAAATGTGTGATCTTTaGAACCACCTGAAACATGAAGTTTTAGTTTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: VRYCHVTKMCDL*NHLKHEVLVSA Trigger: AGCTGAAACTAAAACTTCATGTTTCAGGTGGTTTCAAAGATCACACATTTTTGTTACGTGACAGTACCTTAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR TCA 72 bp | GAGTACTGCAAAATTCTGAATATGAGCTACTTAATATaGAGCACACAGTCAATTTCCCTTCCTAGCAATGTT | + |
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Preference number: 3 (lower is better) Translates to: EYCKILNMSYLI*STQSISLPSNV Trigger: AACATTGCTAGGAAGGGAAATTGACTGTGTGCTTCATATTAAGTAGCTCATATTCAGAATTTTGCAGTACTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR GCA 72 bp | ACAAAGACCACTGGCATATTTATCATCAGTGCCAATTaGTGCTACTCAATTATTAGCATCATAATTTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TKTTGIFIISAN*CYSIISIIISF Trigger: GAAGGAAATTATGATGCTAATAATTGAGTAGCAGCAATTGGCACTGATGATAAATATGCCAGTGGTCTTTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS-3UTR GCA 90 bp | TCCAGTCTTATCTTTGTGTCCTTTCATCCGGGCTGCCACTACAAAGGTAAGGTTCACCTATGGCCCATGTaGTCCCAGCCAACCCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLIFVSFHPGCHYKGKVHLWPM*SQPTLR Trigger: GCGCAGGGTTGGCTGGGAGCACATGGGCCATAGGTG...AACCTTACCTTTGTAGTGGCAGCCCGGATGAAAGGACACAAAGATAAGACTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS-3UTR GCA 90 bp | CTCTATACTCAGTCTGTGTTGAAGCCTGCTTTGATGGGAATGACAAAGTTGCCCGGGGGCAGGGCTGCTTaGTGGAGACTCTTGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LYTQSVLKPALMGMTKLPGGRAA*WRLLGA Trigger: AGCTCCCAAGAGTCTCCAGCAAGCAGCCCTGCCCCC...GGGCAACTTTGTCATTCCCATCAAAGCAGGCTTCAACACAGACTGAGTATAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 72 bp | CTGGTGAGGATGTGGAGAAAGAGGACCACTCCTCCATaGTTGGTGGGATTGCAAGCTGGTACAACCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVRMWRKRTTPP*LVGLQAGTTTL Trigger: CAGAGTGGTTGTACCAGCTTGCAATCCCACCAACAATGGAGGAGTGGTCCTCTTTCTCCACATCCTCACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 72 bp | GTGAGGATGTGGAGAAAGAGGACCACTCCTCCATTGTaGGTGGGATTGCAAGCTGGTACAACCACTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VRMWRKRTTPPL*VGLQAGTTTLE Trigger: TTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACAATGGAGGAGTGGTCCTCTTTCTCCACATCCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS-3UTR CCA 90 bp | TGTTGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAATCGGTTTGGCAGTTCTGGCTCACCACAGACTaGTTAAGGTACTGCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CWWDCKLVQPLWKSVWQFWLTTD*LRYCIL Trigger: GAGGATGCAGTACCTTAACCAGTCTGTGGTGAGCCA...GAACTGCCAAACCGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS-3UTR GCA 90 bp | ACTCTATACTCAGTCTGTGTTGAAGCCTGCTTTGATGGGAATGACAAAGTTGCCCAAAGTCAGCAGGCCTaGCATGACCTTGGGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLYSVCVEACFDGNDKVAQSQQA*HDLGHC Trigger: ACAGTGCCCAAGGTCATGGCAGGCCTGCTGACTTTG...GGCAACTTTGTCATTCCCATCAAAGCAGGCTTCAACACAGACTGAGTATAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS-3UTR CCA 90 bp | CTCTATACTCAGTCTGTGTTGAAGCCTGCTTTGATGGGAATGACAAAGTTGCCCCCCTCCAGGAAGAACTaGCTCACCACAGACTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LYTQSVLKPALMGMTKLPPSRKN*LTTDWL Trigger: TAACCAGTCTGTGGTGAGCCAGTTCTTCCTGGAGGG...GGGCAACTTTGTCATTCCCATCAAAGCAGGCTTCAACACAGACTGAGTATAGAG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS-3UTR GCA 90 bp | TGGGATTGCAAGCTGGTACAACCACTCTGGAAATCGGTTTGGCAGTTCCTCAGACACCACACCAATGTTTaGAAGCATGACAAGCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: WDCKLVQPLWKSVWQFLRHHTNV*KHDKLV Trigger: AACGAGCTTGTCATGCTTGCAAACATTGGTGTGGTG...TCTGAGGAACTGCCAAACCGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS-3UTR TCA 90 bp | TGTTGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAATCGGTTTGGCAGTTCAAGGTTAGGGAAGTGTaGATTGCAGAATGCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CWWDCKLVQPLWKSVWQFKVREV*IAECIA Trigger: TGCTATGCATTCTGCAATTCACACTTCCCTAACCTT...GAACTGCCAAACCGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS-3UTR CCA 90 bp | TCCAGTCTTATCTTTGTGTCCTTTCATCCGGGCTGCCACTACAAAGGTAAGGTTTGTAAAGCACAGCCTTaGAAGGAGATCACCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLIFVSFHPGCHYKGKVCKAQP*KEITFP Trigger: TGGGAAGGTGATCTCCTTCCAAGGCTGTGCTTTACA...AACCTTACCTTTGTAGTGGCAGCCCGGATGAAAGGACACAAAGATAAGACTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 72 bp | GTTTTGGCACTGTCTCCACTCTATACTCAGTCTGTGTaGAAGCCTGCTTTGATGGGAATGACAAAGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLALSPLYTQSV*KPALMGMTKLP Trigger: GGGCAACTTTGTCATTCCCATCAAAGCAGGCTTCAACACAGACTGAGTATAGAGTGGAGACAGTGCCAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 72 bp | ACAGAGGCAGCCAAAAGAGAAGAACATGTGGTCCAGTaGACACTCACTACTTTCCTCCTTAAAGTAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: TEAAKREEHVVQ*TLTTFLLKVGP Trigger: AGGTCCTACTTTAAGGAGGAAAGTAGTGAGTGTCAACTGGACCACATGTTCTTCTCTTTTGGCTGCCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS-3UTR CCA 90 bp | CTCCTTTTATTACAAACTGGTACAAAAGTCTTACACTTGACTGCAACACTATACGGCAGGGCTGCTTGCTaGAGACTCTTGGGAGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: LLLLQTGTKVLHLTATLYGRAAC*RLLGAT Trigger: TGTAGCTCCCAAGAGTCTCCAGCAAGCAGCCCTGCC...GTATAGTGTTGCAGTCAAGTGTAAGACTTTTGTACCAGTTTGTAATAAAAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 72 bp | CCACTCTGGAAATCGGTTTGGCAGTTCCTCAGAAAATaGGACATAGTACTACAGGAAGATCCAGCAATACCT | + |
|
Preference number: 4 (lower is better) Translates to: PLWKSVWQFLRK*DIVLQEDPAIP Trigger: AGGTATTGCTGGATCTTCCTGTAGTACTATGTCCAATTTTCTGAGGAACTGCCAAACCGATTTCCAGAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 72 bp | GGATTGCAAGCTGGTACAACCACTCTGGAAATCGGTTaGGCAGTTCCTCAGAAAATTGGACATAGTACTACA | + |
|
Preference number: 4 (lower is better) Translates to: GLQAGTTTLEIG*AVPQKIGHSTT Trigger: TGTAGTACTATGTCCAATTTTCTGAGGAACTGCCAAACCGATTTCCAGAGTGGTTGTACCAGCTTGCAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 72 bp | TCTGTGTTGAAGCCTGCTTTGATGGGAATGACAAAGTaGCCCCAGTTAAGTTCATCCTACAGTTGTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVLKPALMGMTK*PQLSSSYSCYQ Trigger: CTGATAACAACTGTAGGATGAACTTAACTGGGGCAACTTTGTCATTCCCATCAAAGCAGGCTTCAACACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS-3UTR TCA 90 bp | CTCCTTTTATTACAAACTGGTACAAAAGTCTTACACTTGACTGCAACACTATACTTCTCAGAGCCCGCTTaGCTTCCTTGTTTCTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLQTGTKVLHLTATLYFSEPA*LPCFLV Trigger: CACTAAGAAACAAGGAAGTCAAGCGGGCTCTGAGAA...GTATAGTGTTGCAGTCAAGTGTAAGACTTTTGTACCAGTTTGTAATAAAAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 72 bp | AGCAATACCTCTCCTGGGCATATAACCAGAATCGTGTaGGATCTGTCACTTTGTTATCTAGAAAATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SNTSPGHITRIV*DLSLCYLENSV Trigger: AACAGAATTTTCTAGATAACAAAGTGACAGATCCAACACGATTCTGGTTATATGCCCAGGAGAGGTATTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 72 bp | CTTAATCATCAGGGAAATATGCAAATCAAAACAACCTaGAGATTCCATCTCACACCAGTCAGAATGGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNHQGNMQIKTT*RFHLTPVRMAK Trigger: CTTAGCCATTCTGACTGGTGTGAGATGGAATCTCAAGGTTGTTTTGATTTGCATATTTCCCTGATGATTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 72 bp | TGGGCATATAACCAGAATCGTGTTGGATCTGTCACTTaGTTATCTAGAAAATTCTGTTCCTCTCATTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WAYNQNRVGSVT*LSRKFCSSHCS Trigger: TGAACAATGAGAGGAACAGAATTTTCTAGATAACAAAGTGACAGATCCAACACGATTCTGGTTATATGCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 72 bp | GTGTTTGTGTGTGATATTGTTATAGTGCTTGTTCATTaGACAGATGTTCTGGTATCATTAAGCACTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VFVCDIVIVLVH*TDVLVSLSTGH Trigger: GTGACCAGTGCTTAATGATACCAGAACATCTGTCAAATGAACAAGCACTATAACAATATCACACACAAACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 72 bp | TTCCTCTCATTGTTCACCAATGGAAATAGCAAAACCTaGAGAGTTATCTCATTGAGACCTCCTAAAATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: FLSLFTNGNSKT*RVISLRPPKIL Trigger: TAGAATTTTAGGAGGTCTCAATGAGATAACTCTCAAGGTTTTGCTATTTCCATTGGTGAACAATGAGAGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| 3UTR CAA 72 bp | ATAGAACATAGCAAAGGAAGCATAGGAGTGCTTTGTTaGGGGCTATTCATACAGAAGAACAGAACAATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: IEHSKGSIGVLC*GLFIQKNRTIK Trigger: TTTAATTGTTCTGTTCTTCTGTATGAATAGCCCCAAACAAAGCACTCCTATGCTTCCTTTGCTATGTTCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS GCA 90 bp | CATTGGAGTGACTATTGTGTAGAAGACTGCTGGAGCTCCCGCCCCTaGGCCAGTGGAGCTTGGCTGCAGGTAGATACAGACCGGGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HWSDYCVEDCWSSRP*ASGAWLQVDTDRGH Trigger: ATGCCCCCGGTCTGTATCTACCTGCAGCCAAGCTCCACTGGCGCAGGGGCGGGAGCTCCAGCAGTCTTCTACACAATAGTCACTCCAATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS GCA 90 bp | ACAGCCTTGGAAGGAGATCACCTTCCCATCCAAAGTCAGCAGGCCTaGCATGACCTTGGGCACTGTTACTGTAGACAGACACGCATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TALEGDHLPIQSQQA*HDLGHCYCRQTRIK Trigger: CTTGATGCGTGTCTGTCTACAGTAACAGTGCCCAAGGTCATGGCAGGCCTGCTGACTTTGGATGGGAAGGTGATCTCCTTCCAAGGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS-3UTR CAA 90 bp | TGTTGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAATCGGTTTGGCAGTTCAGCATGACAAGCTCGTaGATGGTGGTGTCAGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: CWWDCKLVQPLWKSVWQFSMTSS*MVVSAQ Trigger: CTGTGCTGACACCACCATCAACGAGCTTGTCATGCT...GAACTGCCAAACCGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS-3UTR CAA 90 bp | ACTCTATACTCAGTCTGTGTTGAAGCCTGCTTTGATGGGAATGACAAAGTTGCCCTGCGCCAGTGGAGCTaGGCTGCAGGTAGATACAGA | + |
|
Preference number: 5 (lower is better) Translates to: TLYSVCVEACFDGNDKVALRQWS*AAGRYR Trigger: TCTGTATCTACCTGCAGCCAAGCTCCACTGGCGCAG...GGCAACTTTGTCATTCCCATCAAAGCAGGCTTCAACACAGACTGAGTATAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS-3UTR CAA 90 bp | GTAAAAATCAATGCTTCCAGTCTTATCTTTGTGTCCTTTCATCCGGGCTGCCACAGGCCTGCCATGACCTaGGGCACTGTTACTGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VKINASSLIFVSFHPGCHRPAMT*GTVTVD Trigger: GTCTACAGTAACAGTGCCCAAGGTCATGGCAGGCCT...GTGGCAGCCCGGATGAAAGGACACAAAGATAAGACTGGAAGCATTGATTTTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS-3UTR CAA 90 bp | CTCCTTTTATTACAAACTGGTACAAAAGTCTTACACTTGACTGCAACACTATACAGGGGGCAGGGCTGCTaGCTGGAGACTCTTGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLQTGTKVLHLTATLYRGQGC*LETLGS Trigger: GCTCCCAAGAGTCTCCAGCAAGCAGCCCTGCCCCCT...GTATAGTGTTGCAGTCAAGTGTAAGACTTTTGTACCAGTTTGTAATAAAAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS GCA 72 bp | CATAGCACCTATGGCCCATGTGCTCCCAGCCAACCCTaGGCACACCCGCTTGTTCATAACCACTGGGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: HSTYGPCAPSQP*AHPLVHNHWVV Trigger: CACTACCCAGTGGTTATGAACAAGCGGGTGTGCGCAGGGTTGGCTGGGAGCACATGGGCCATAGGTGCTATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS GCA 72 bp | GACTATTGTGTAGAAGACTGCTGGAGCTCCCGCCCCTaGGCCAGTGGAGCTTGGCTGCAGGTAGATACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: DYCVEDCWSSRP*ASGAWLQVDTD Trigger: GTCTGTATCTACCTGCAGCCAAGCTCCACTGGCGCAGGGGCGGGAGCTCCAGCAGTCTTCTACACAATAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS GCA 72 bp | GAGAATGAGGCAGCCCGCAGCCACCACACCAATGTTTaGAAGCATGACAAGCTCGTTGATGGTGGTGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ENEAARSHHTNV*KHDKLVDGGVS Trigger: GCTGACACCACCATCAACGAGCTTGTCATGCTTGCAAACATTGGTGTGGTGGCTGCGGGCTGCCTCATTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS CAA 90 bp | AAGGAGATCACCTTCCCATCCAAAGTCAGCAGGCCTGCCATGACCTaGGGCACTGTTACTGTAGACAGACACGCATCAAGGAAGGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KEITFPSKVSRPAMT*GTVTVDRHASRKER Trigger: CCTCTCCTTCCTTGATGCGTGTCTGTCTACAGTAACAGTGCCCAAGGTCATGGCAGGCCTGCTGACTTTGGATGGGAAGGTGATCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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| CDS GCA 72 bp | GAAGGAGATCACCTTCCCATCCAAAGTCAGCAGGCCTaGCATGACCTTGGGCACTGTTACTGTAGACAGACA | + |
|
Preference number: 6 (lower is better) Translates to: EGDHLPIQSQQA*HDLGHCYCRQT Trigger: TGTCTGTCTACAGTAACAGTGCCCAAGGTCATGGCAGGCCTGCTGACTTTGGATGGGAAGGTGATCTCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054051.5 |
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