Pregenerated sensors for OLFR981 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046678Ensembl transcript IDs: ENSMUST00000059859.5, ENSMUST00000215956.3
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCCTAGCAAACACTTAAGTGGATGCTCACAGTCAGCTATTGGATaGAGCACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAG | + |
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Preference number: 1 (lower is better) Translates to: GPSKHLSGCSQSAIG*STGPPVEELEKVPK Trigger: CTTGGGTACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTGCTCCATCCAATAGCTGACTGTGAGCATCCACTTAAGTGTTTGCTAGGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CCA 90 bp | CCACCATGTGTTTTCTCTGATTGGTGGTTTAGTCCCTGGGAGCTCTaGGGGTACTGGCTGGTTCATATTGTTGTTCCTCCTATGGGACTG | + |
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Preference number: 1 (lower is better) Translates to: PPCVFSDWWFSPWEL*GYWLVHIVVPPMGL Trigger: CAGTCCCATAGGAGGAACAACAATATGAACCAGCCAGTACCCCCAGAGCTCCCAGGGACTAAACCACCAATCAGAGAAAACACATGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CCA 90 bp | CCAAGAGTCCCACCATGTGTTTTCTCTGATTGGTGGTTTAGTCCCTaGGAGCTCTGGGGGTACTGGCTGGTTCATATTGTTGTTCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: PRVPPCVFSDWWFSP*ELWGYWLVHIVVPP Trigger: AGGAGGAACAACAATATGAACCAGCCAGTACCCCCAGAGCTCCCAGGGACTAAACCACCAATCAGAGAAAACACATGGTGGGACTCTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CCA 90 bp | ATAAAGCTAGAGCCAAGAGTCCCACCATGTGTTTTCTCTGATTGGTaGTTTAGTCCCTGGGAGCTCTGGGGGTACTGGCTGGTTCATATT | + |
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Preference number: 1 (lower is better) Translates to: IKLEPRVPPCVFSDW*FSPWELWGYWLVHI Trigger: AATATGAACCAGCCAGTACCCCCAGAGCTCCCAGGGACTAAACCACCAATCAGAGAAAACACATGGTGGGACTCTTGGCTCTAGCTTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CCA 90 bp | AATATAAAGCTAGAGCCAAGAGTCCCACCATGTGTTTTCTCTGATTaGTGGTTTAGTCCCTGGGAGCTCTGGGGGTACTGGCTGGTTCAT | + |
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Preference number: 1 (lower is better) Translates to: NIKLEPRVPPCVFSD*WFSPWELWGYWLVH Trigger: ATGAACCAGCCAGTACCCCCAGAGCTCCCAGGGACTAAACCACCAATCAGAGAAAACACATGGTGGGACTCTTGGCTCTAGCTTTATATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR TCA 90 bp | CATATTGTTGTTCCTCCTATGGGACTGCAAATCCCTTCAGCTCCTTaGGTTCTTTCTCTAGCTCCTTCATTGGGGATCCTGTGCTCTGTC | + |
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Preference number: 1 (lower is better) Translates to: HIVVPPMGLQIPSAP*VLSLAPSLGILCSV Trigger: GACAGAGCACAGGATCCCCAATGAAGGAGCTAGAGAAAGAACTCAAGGAGCTGAAGGGATTTGCAGTCCCATAGGAGGAACAACAATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CCA 90 bp | GTTACAGAGACAAAGTTTGGAGGTGAGACAAAAGGATGGACCAACTaGAGACTGCCATATTCAGGGATCCATCCCATAATCAGCCCCCAA | + |
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Preference number: 1 (lower is better) Translates to: VTETKFGGETKGWTN*RLPYSGIHPIISPQ Trigger: TTGGGGGCTGATTATGGGATGGATCCCTGAATATGGCAGTCTCCAGTTGGTCCATCCTTTTGTCTCACCTCCAAACTTTGTCTCTGTAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR TCA 90 bp | AAACTCTCTGAAGGCAGTAAAACTATGCCTAGGAAGAGCATGAGGTaGGTCATTATCTGCTGCTGTGGTTGGTGTGAAGCAACCCCATAT | + |
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Preference number: 1 (lower is better) Translates to: KLSEGSKTMPRKSMR*VIICCCGWCEATPY Trigger: ATATGGGGTTGCTTCACACCAACCACAGCAGCAGATAATGACTCACCTCATGCTCTTCCTAGGCATAGTTTTACTGCCTTCAGAGAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR TCA 90 bp | CAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGATCAACATTATaGACTAACCAGTACCCCGGAGGTCTTGACTCTAGCTTCATATGT | + |
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Preference number: 1 (lower is better) Translates to: QGAKGICNPIGGSTL*TNQYPGGLDSSFIC Trigger: ACATATGAAGCTAGAGTCAAGACCTCCGGGGTACTGGTTAGTTCATAATGTTGATCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CCA 90 bp | GTGTTTTATTTAGTCATCATTAGAAAAGCTTCCTCTGGCATCAGATaGGAGCAGATGCTGAGATCCACAGCCAGATATGTGGAGAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: VFYLVIIRKASSGIR*EQMLRSTARYVERE Trigger: CTCCCTCTCCACATATCTGGCTGTGGATCTCAGCATCTGCTCCCATCTGATGCCAGAGGAAGCTTTTCTAATGATGACTAAATAAAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CCA 90 bp | ATGGAAGGAGTTACAGAGACAAAGTTTGGAGGTGAGACAAAAGGATaGACCAACTGGAGACTGCCATATTCAGGGATCCATCCCATAATC | + |
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Preference number: 1 (lower is better) Translates to: MEGVTETKFGGETKG*TNWRLPYSGIHPII Trigger: GATTATGGGATGGATCCCTGAATATGGCAGTCTCCAGTTGGTCCATCCTTTTGTCTCACCTCCAAACTTTGTCTCTGTAACTCCTTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CCA 90 bp | CTCCATTGGAATTGTCTGGAGAATGAGATATTCTTGGACTGTCTGTaGCCAGGTGCATTCTCAAAACCAGGACAAGTATATCCAGTGCTT | + |
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Preference number: 1 (lower is better) Translates to: LHWNCLENEIFLDCL*PGAFSKPGQVYPVL Trigger: AAGCACTGGATATACTTGTCCTGGTTTTGAGAATGCACCTGGCCACAGACAGTCCAAGAATATCTCATTCTCCAGACAATTCCAATGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR TCA 90 bp | CATCATCCTAGGTTTAAAAAGGCTCCATTGGAATTGTCTGGAGAATaGGATATTCTTGGACTGTCTGTGGCCAGGTGCATTCTCAAAACC | + |
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Preference number: 1 (lower is better) Translates to: HHPRFKKAPLELSGE*DILGLSVARCILKT Trigger: GGTTTTGAGAATGCACCTGGCCACAGACAGTCCAAGAATATCTCATTCTCCAGACAATTCCAATGGAGCCTTTTTAAACCTAGGATGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CCA 90 bp | AGTAATCTTCCCTCAGCCATCATCCTAGGTTTAAAAAGGCTCCATTaGAATTGTCTGGAGAATGAGATATTCTTGGACTGTCTGTGGCCA | + |
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Preference number: 1 (lower is better) Translates to: SNLPSAIILGLKRLH*NCLENEIFLDCLWP Trigger: TGGCCACAGACAGTCCAAGAATATCTCATTCTCCAGACAATTCCAATGGAGCCTTTTTAAACCTAGGATGATGGCTGAGGGAAGATTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR TCA 90 bp | TATGCATTCAGCTTAGTGTTTTTACAGGACTCCTCAGTGTGTGGTTaGGTGGGTCTCTCTGATTTTTGTTCTGGCTATTGGGAATCTTTT | + |
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Preference number: 1 (lower is better) Translates to: YAFSLVFLQDSSVCG*VGLSDFCSGYWESF Trigger: AAAAGATTCCCAATAGCCAGAACAAAAATCAGAGAGACCCACTCAACCACACACTGAGGAGTCCTGTAAAAACACTAAGCTGAATGCATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CCA 90 bp | CAAGGCATTGGGCAGTACACATGTAATAGGTCCCTCATACTGAAGTaGAATTTCTCCTTCATGTTCAAGTACAATGGCAGTTCTTTTGTT | + |
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Preference number: 1 (lower is better) Translates to: QGIGQYTCNRSLILK*NFSFMFKYNGSSFV Trigger: AACAAAAGAACTGCCATTGTACTTGAACATGAAGGAGAAATTCCACTTCAGTATGAGGGACCTATTACATGTGTACTGCCCAATGCCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR TCA 90 bp | CCATATCAGACAGTCTGTTTCACTTGCATCCACAGAACATCAGAATaGTATACTTTATGCATATGGCAAGGGAACTTTTCCTTGATTCAG | + |
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Preference number: 1 (lower is better) Translates to: PYQTVCFTCIHRTSE*YTLCIWQGNFSLIQ Trigger: CTGAATCAAGGAAAAGTTCCCTTGCCATATGCATAAAGTATATCATTCTGATGTTCTGTGGATGCAAGTGAAACAGACTGTCTGATATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR TCA 90 bp | CATCAGAATGATATACTTTATGCATATGGCAAGGGAACTTTTCCTTaGTTCAGCTACCTAAATTTTACCAAAGTAGAGTCCTGTGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: HQNDILYAYGKGTFP*FSYLNFTKVESCES Trigger: GCTCTCACAGGACTCTACTTTGGTAAAATTTAGGTAGCTGAATCAAGGAAAAGTTCCCTTGCCATATGCATAAAGTATATCATTCTGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR TCA 90 bp | TATCCTATCAAGGACCAACAACTAACAACCATTTACTCTGCCTCTTaGGTTCCTAGCATTTATATAACTTCTGAAAAGTTCCCACAATTC | + |
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Preference number: 1 (lower is better) Translates to: YPIKDQQLTTIYSAS*VPSIYITSEKFPQF Trigger: GAATTGTGGGAACTTTTCAGAAGTTATATAAATGCTAGGAACTCAAGAGGCAGAGTAAATGGTTGTTAGTTGTTGGTCCTTGATAGGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR GCA 90 bp | CACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCCAACCCACCCACTCCTaGTTCCTGGCACTGGCATTC | + |
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Preference number: 2 (lower is better) Translates to: HRAPSGGARESTQGAKGIQPTHS*FLALAF Trigger: GAATGCCAGTGCCAGGAAGCAGGAGTGGGTGGGTTG...GATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CAA 90 bp | GGTGGTTTAGTCCCTGGGAGCTCTGGGGGTACTGGCTGGTTCATATaGTTGTTCCTCCTATGGGACTGCAAATCCCTTCAGCTCCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: GGLVPGSSGGTGWFI*LFLLWDCKSLQLLE Trigger: CTCAAGGAGCTGAAGGGATTTGCAGTCCCATAGGAGGAACAACAATATGAACCAGCCAGTACCCCCAGAGCTCCCAGGGACTAAACCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR GCA 90 bp | CACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTTCCTCCTATGGGACTaGAAATCCCTTCAGCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: HRAPSGGARESTQGAKGIFLLWD*KSLQLL Trigger: AAGGAGCTGAAGGGATTTGCAGTCCCATAGGAGGAA...GATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR CCA 90 bp | CCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCTCTGGGGGTACTGGCTaGTTCATATTGTTGTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: PPVEELEKVPKELKGSATSGGTG*FILLFL Trigger: GAGGAACAACAATATGAACCAGCCAGTACCCCCAGA...GGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR GCA 90 bp | CACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCCTCTTCCTAGTTACTTaGCACAATGTCTCTCATCCT | + |
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Preference number: 2 (lower is better) Translates to: HRAPSGGARESTQGAKGILFLVT*HNVSHP Trigger: AGGATGAGAGACATTGTGGCAAGTAACTAGGAAGAG...GATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR TCA 90 bp | CCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCATAGGTCCCTCATACTaGAGTGGAATTTCTCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: PPVEELEKVPKELKGSATIGPSY*SGISPS Trigger: TGAAGGAGAAATTCCACTTCAGTATGAGGGACCTAT...GGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR GCA 90 bp | CACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTATGTATCAAAAGATTaGCTAGTTGGCCATCACTGG | + |
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Preference number: 2 (lower is better) Translates to: HRAPSGGARESTQGAKGIYVSKD*LVGHHW Trigger: CCAGTGATGGCCAACTAGGCAATCTTTTGATACATA...GATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR CCA 90 bp | CACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTCCCTCATACTGAAGTaGAATTTCTCCTTCATGTTC | + |
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Preference number: 2 (lower is better) Translates to: HRAPSGGARESTQGAKGISLILK*NFSFMF Trigger: GAACATGAAGGAGAAATTCCACTTCAGTATGAGGGA...GATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR CCA 90 bp | CACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTTATCACTTAGGCTCTaGCTCCATTTTGAGTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: HRAPSGGARESTQGAKGILSLRL*LHFEFG Trigger: TCCAAACTCAAAATGGAGCCAGAGCCTAAGTGATAA...GATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR TCA 90 bp | CCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCGAATTGTCTGGAGAATaGGATATTCTTGGACTGTCT | + |
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Preference number: 2 (lower is better) Translates to: PPVEELEKVPKELKGSATELSGE*DILGLS Trigger: AGACAGTCCAAGAATATCTCATTCTCCAGACAATTC...GGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR TCA 90 bp | CCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCGGCTTTGATGAGAGGTaGTACTTTTGTGTTTACAGT | + |
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Preference number: 2 (lower is better) Translates to: PPVEELEKVPKELKGSATGFDER*YFCVYS Trigger: ACTGTAAACACAAAAGTATCACCTCTCATCAAAGCC...GGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR CCA 90 bp | CACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCCATGATCAAAGACACTaGATAAAATGTGAAGGGTAC | + |
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Preference number: 2 (lower is better) Translates to: HRAPSGGARESTQGAKGIHDQRH*IKCEGY Trigger: GTACCCTTCACATTTTATCCAGTGTCTTTGATCATG...GATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR CCA 90 bp | TGGGTCTCTCTGATTTTTGTTCTGGCTATTGGGAATCTTTTCCTTCTGTTGGGTCCTGCTTCCTGGCACTaGCATTCCCCTATACTGGGG | + |
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Preference number: 2 (lower is better) Translates to: WVSLIFVLAIGNLFLLLGPASWH*HSPILG Trigger: CCCCAGTATAGGGGAATGCCAGTGCCAGGAAGCAGG...ACCCAACAGAAGGAAAAGATTCCCAATAGCCAGAACAAAAATCAGAGAGACCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGATCAACAGTGGGTGGGAGGGTATaGGGGACTTTTTGGATAGCA | + |
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Preference number: 2 (lower is better) Translates to: RESTQGAKGICNPIGGSTVGGRV*GTFWIA Trigger: TGCTATCCAAAAAGTCCCCCATACCCTCCCACCCAC...TGTTGATCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR GCA 90 bp | CCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCATAGTCTATTGCCATTaGATAAAGCCTGATGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: PPVEELEKVPKELKGSATIVYCH*IKPDEV Trigger: CACTTCATCAGGCTTTATGCAATGGCAATAGACTAT...GGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR GCA 90 bp | CCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCAAGGAGAGTATGCCCTaGAGGGAATTTAGAAATAAT | + |
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Preference number: 2 (lower is better) Translates to: PPVEELEKVPKELKGSATKESMP*REFRNN Trigger: ATTATTTCTAAATTCCCTGCAGGGCATACTCTCCTT...GGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR CCA 90 bp | CACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTATACTTTATGCATATaGCAAGGGAACTTTTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: HRAPSGGARESTQGAKGIYTLCI*QGNFSL Trigger: CAAGGAAAAGTTCCCTTGCCATATGCATAAAGTATA...GATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CAA 90 bp | GAACCTCTCAGGAGACAACTTTATCAGGCTCCTGTGAGCAAGCTCTaGTTGGCATCCGAAATAGTGTCTGGGTTTGGTAGTTGTTTATGG | + |
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Preference number: 2 (lower is better) Translates to: EPLRRQLYQAPVSKL*LASEIVSGFGSCLW Trigger: CCATAAACAACTACCAAACCCAGACACTATTTCGGATGCCAACAAGAGCTTGCTCACAGGAGCCTGATAAAGTTGTCTCCTGAGAGGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CAA 90 bp | TCATATTGTTGTTCCTCCTATGGGACTGCAAATCCCTTCAGCTCCTaGAGTTCTTTCTCTAGCTCCTTCATTGGGGATCCTGTGCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: SYCCSSYGTANPFSS*SSFSSSFIGDPVLC Trigger: ACAGAGCACAGGATCCCCAATGAAGGAGCTAGAGAAAGAACTCAAGGAGCTGAAGGGATTTGCAGTCCCATAGGAGGAACAACAATATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR GCA 90 bp | AATCTTTTCCTTCTGTTGGGTTGCCTTGTCCCACCTCAATATTATGGTTTTCGCTCATTGGGGATCCTGTaGTCTGTCCAATGGACGGCT | + |
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Preference number: 2 (lower is better) Translates to: NLFLLLGCLVPPQYYGFRSLGIL*SVQWTA Trigger: AGCCGTCCATTGGACAGAGCACAGGATCCCCAATGA...GCGAAAACCATAATATTGAGGTGGGACAAGGCAACCCAACAGAAGGAAAAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR CCA 90 bp | CCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCGGATGTAACAATGTCTaGCTGAAGATTTCAATCTTT | + |
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Preference number: 2 (lower is better) Translates to: PPVEELEKVPKELKGSATGCNNV*LKISIF Trigger: AAAGATTGAAATCTTCAGCCAGACATTGTTACATCC...GGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CAA 90 bp | CAGATGCTGAGATCCACAGCCAGATATGTGGAGAGGGAGTCTAAATaGAATTTATCTATCACACCACTCTCCTCATATCTCAGGGAACCC | + |
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Preference number: 2 (lower is better) Translates to: QMLRSTARYVERESK*NLSITPLSSYLREP Trigger: GGGTTCCCTGAGATATGAGGAGAGTGGTGTGATAGATAAATTCAATTTAGACTCCCTCTCCACATATCTGGCTGTGGATCTCAGCATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGATCAACAGCTCTGGCTCCATTTTaGGTTTGGAGTATGATGGTT | + |
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Preference number: 2 (lower is better) Translates to: RESTQGAKGICNPIGGSTALAPF*VWSMMV Trigger: AACCATCATACTCCAAACTCAAAATGGAGCCAGAGC...TGTTGATCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR TCA 90 bp | TCAAATGTTATCCCCCTTTCCTGGTTTCTCCTCCAAAACTCCACTATTGCCTCTTGCCTAGGAAGAGCATaGGGTGAGTCATTATCTGCT | + |
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Preference number: 2 (lower is better) Translates to: SNVIPLSWFLLQNSTIASCLGRA*GESLSA Trigger: AGCAGATAATGACTCACCTCATGCTCTTCCTAGGCA...AGAGGCAATAGTGGAGTTTTGGAGGAGAAACCAGGAAAGGGGGATAACATTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGATCAACACTAGTTGGCCATCACTaGAAAGACAGTCCCATTGAA | + |
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Preference number: 2 (lower is better) Translates to: RESTQGAKGICNPIGGSTLVGHH*KDSPIE Trigger: TTCAATGGGACTGTCTTTCCAGTGATGGCCAACTAG...TGTTGATCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGATCAACAGCTGTTCTTTACCAGTaGGTTAATTTCCCTAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: RESTQGAKGICNPIGGSTAVLYQ*VNFPRA Trigger: TGCTCTAGGGAAATTAACTCACTGGTAAAGAACAGC...TGTTGATCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR CCA 90 bp | AATCTTTTCCTTCTGTTGGGTTGCCTTGTCCCACCTCAATATTATGGTTTTCGCATCTGCTGCTGTGGTTaGTGTGAAGCAACCCCATAT | + |
|
Preference number: 2 (lower is better) Translates to: NLFLLLGCLVPPQYYGFRICCCG*CEATPY Trigger: ATATGGGGTTGCTTCACACCAACCACAGCAGCAGAT...GCGAAAACCATAATATTGAGGTGGGACAAGGCAACCCAACAGAAGGAAAAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CCA 90 bp | TCAAATGTTATCCCCCTTTCCTGGTTTCTCCTCCAAAACTCCACTATTGCCTCTTGTGTTTTCTCTGATTaGTGGTTTAGTCCCTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SNVIPLSWFLLQNSTIASCVFSD*WFSPWE Trigger: CTCCCAGGGACTAAACCACCAATCAGAGAAAACACA...AGAGGCAATAGTGGAGTTTTGGAGGAGAAACCAGGAAAGGGGGATAACATTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTGGATATATATTATGCATTCAGCTTAGTGTTTTTACAGGACTCCTCAGTGCCCACTCCTGCTTCCTaGCACTGGCATTCCCCTATA | + |
|
Preference number: 2 (lower is better) Translates to: PLDIYYAFSLVFLQDSSVPTPAS*HWHSPI Trigger: TATAGGGGAATGCCAGTGCCAGGAAGCAGGAGTGGG...CACTGAGGAGTCCTGTAAAAACACTAAGCTGAATGCATAATATATATCCAAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CAA 90 bp | GGTTTAAAAAGGCTCCATTGGAATTGTCTGGAGAATGAGATATTCTaGGACTGTCTGTGGCCAGGTGCATTCTCAAAACCAGGACAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: GLKRLHWNCLENEIF*DCLWPGAFSKPGQV Trigger: TACTTGTCCTGGTTTTGAGAATGCACCTGGCCACAGACAGTCCAAGAATATCTCATTCTCCAGACAATTCCAATGGAGCCTTTTTAAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CAA 90 bp | GAACATAAAAATCAGAGAGGATGGAGGACACTAGAACCACACCCTTaGAACCAGCTAAGTAAGGCTCATAGGAATGCACAAAGACCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: EHKNQRGWRTLEPHP*NQLSKAHRNAQRPS Trigger: ACTTGGTCTTTGTGCATTCCTATGAGCCTTACTTAGCTGGTTCAAAGGGTGTGGTTCTAGTGTCCTCCATCCTCTCTGATTTTTATGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR TCA 90 bp | AGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGATCAACAGCAGATAGAAACAACTaGCTTTTAGTGAACATGCCA | + |
|
Preference number: 2 (lower is better) Translates to: RESTQGAKGICNPIGGSTADRNN*LLVNMP Trigger: TGGCATGTTCACTAAAAGTCAGTTGTTTCTATCTGC...TGTTGATCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR GCA 90 bp | TCAAATGTTATCCCCCTTTCCTGGTTTCTCCTCCAAAACTCCACTATTGCCTCTACTGTGTGGGGAAGATaGTTCTTAACTGTGAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SNVIPLSWFLLQNSTIASTVWGR*FLTVKR Trigger: TCTCTTCACAGTTAAGAAGCATCTTCCCCACACAGT...AGAGGCAATAGTGGAGTTTTGGAGGAGAAACCAGGAAAGGGGGATAACATTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CCA 90 bp | ATTACTTCAGTCTCTGATCCACACTTTGTCTCTGTAACTCCTTCCATGGGTAGTTTCTTGGACTGTCTGTaGCCAGGTGCATTCTCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: ITSVSDPHFVSVTPSMGSFLDCL*PGAFSK Trigger: TTTTGAGAATGCACCTGGCCACAGACAGTCCAAGAA...ACTACCCATGGAAGGAGTTACAGAGACAAAGTGTGGATCAGAGACTGAAGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CCA 90 bp | AATCTTTTCCTTCTGTTGGGTTGCCTTGTCCCACCTCAATATTATGGTTTTCGCCAAACATCACACAACTaGGGAAATTGGGAAAGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: NLFLLLGCLVPPQYYGFRQTSHN*GNWERG Trigger: TCCCCTTTCCCAATTTCCCCAGTTGTGTGATGTTTG...GCGAAAACCATAATATTGAGGTGGGACAAGGCAACCCAACAGAAGGAAAAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CCA 90 bp | AATCTTTTCCTTCTGTTGGGTTGCCTTGTCCCACCTCAATATTATGGTTTTCGCTTTGGTAGTTGTTTATaGGATGGATGTCCAGGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: NLFLLLGCLVPPQYYGFRFGSCL*DGCPGG Trigger: GCCACCTGGACATCCATCCCATAAACAACTACCAAA...GCGAAAACCATAATATTGAGGTGGGACAAGGCAACCCAACAGAAGGAAAAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR TCA 90 bp | AGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGATCAACATGTTACAGAAAAGCATaGGTACCATTGGGTTACAAT | + |
|
Preference number: 2 (lower is better) Translates to: RESTQGAKGICNPIGGSTCYRKA*VPLGYN Trigger: ATTGTAACCCAATGGTACTCATGCTTTTCTGTAACA...TGTTGATCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR TCA 90 bp | TCAAATGTTATCCCCCTTTCCTGGTTTCTCCTCCAAAACTCCACTATTGCCTCTGATTTTCTACAGTGCTaGAGGATGTTACAGAAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: SNVIPLSWFLLQNSTIASDFLQC*RMLQKS Trigger: GCTTTTCTGTAACATCCTTCAGCACTGTAGAAAATC...AGAGGCAATAGTGGAGTTTTGGAGGAGAAACCAGGAAAGGGGGATAACATTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR TCA 90 bp | TCAAATGTTATCCCCCTTTCCTGGTTTCTCCTCCAAAACTCCACTATTGCCTCTCAGTGGGATTTTGATTaGTTTTCTACAGTGCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SNVIPLSWFLLQNSTIASQWDFD*FSTVLK Trigger: CTTCAGCACTGTAGAAAATCAATCAAAATCCCACTG...AGAGGCAATAGTGGAGTTTTGGAGGAGAAACCAGGAAAGGGGGATAACATTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR TCA 90 bp | GGGGAGCATAGGACTGGAATAGTTATAGGAAACTTGAATCTCAAATACAGGGTCGAGAGAAGAGAGTTGTaGATGCTACCTTACTTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: GEHRTGIVIGNLNLKYRVERREL*MLPYFL Trigger: AAGGAAGTAAGGTAGCATTCACAACTCTCTTCTCTC...GACCCTGTATTTGAGATTCAAGTTTCCTATAACTATTCCAGTCCTATGCTCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR TCA 90 bp | GGGGAGCATAGGACTGGAATAGTTATAGGAAACTTGAATCTCAAATACAGGGTCACACTGGATAAAATGTaGAGGGTACCCATCTTAGAC | + |
|
Preference number: 2 (lower is better) Translates to: GEHRTGIVIGNLNLKYRVTLDKM*RVPILD Trigger: GTCTAAGATGGGTACCCTTCACATTTTATCCAGTGT...GACCCTGTATTTGAGATTCAAGTTTCCTATAACTATTCCAGTCCTATGCTCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR GCA 90 bp | AGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGATCAACAAATTGTCACTACACATaGCATAAAACAGATGACCCT | + |
|
Preference number: 2 (lower is better) Translates to: RESTQGAKGICNPIGGSTNCHYT*HKTDDP Trigger: AGGGTCATCTGTTTTATGGCATGTGTAGTGACAATT...TGTTGATCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CCA 90 bp | TCAAATGTTATCCCCCTTTCCTGGTTTCTCCTCCAAAACTCCACTATTGCCTCTTTAAAAATACATAGCTaGAGGGTTCTTTGTGGCGAC | + |
|
Preference number: 2 (lower is better) Translates to: SNVIPLSWFLLQNSTIASLKIHS*RVLCGD Trigger: GTCGCCACAAAGAACCCTCCAGCTATGTATTTTTAA...AGAGGCAATAGTGGAGTTTTGGAGGAGAAACCAGGAAAGGGGGATAACATTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CAA 90 bp | TGTGTGTATACTATGGTTTTCAGCTTAGTATTTCCTTCATTGTCTTaGTACACTTTCCACAAAACAGCAAGCACAGGGTCTACACGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: CVYTMVFSLVFPSLS*YTFHKTASTGSTRP Trigger: GGGACGTGTAGACCCTGTGCTTGCTGTTTTGTGGAAAGTGTACAAAGACAATGAAGGAAATACTAAGCTGAAAACCATAGTATACACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR TCA 90 bp | ATTACTTCAGTCTCTGATCCACACTTTGTCTCTGTAACTCCTTCCATGGGTAGTTGTGCAGTGGGATTTTaGTTGATTTTCTACAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: ITSVSDPHFVSVTPSMGSCAVGF*LIFYSA Trigger: AGCACTGTAGAAAATCAATCAAAATCCCACTGCACA...ACTACCCATGGAAGGAGTTACAGAGACAAAGTGTGGATCAGAGACTGAAGTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR GCA 90 bp | TGGGTCTCTCTGATTTTTGTTCTGGCTATTGGGAATCTTTTCCTTCTGTTGGGTACAGTCTGTTTCACTTaGATCCACAGAACATCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: WVSLIFVLAIGNLFLLLGTVCFT*IHRTSE Trigger: TTCTGATGTTCTGTGGATGCAAGTGAAACAGACTGT...ACCCAACAGAAGGAAAAGATTCCCAATAGCCAGAACAAAAATCAGAGAGACCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CCA 90 bp | GGGGAGCATAGGACTGGAATAGTTATAGGAAACTTGAATCTCAAATACAGGGTCTATGATGGTTGCCTGTaGCTTTGTGGTTGTGTATAT | + |
|
Preference number: 2 (lower is better) Translates to: GEHRTGIVIGNLNLKYRVYDGCL*LCGCVY Trigger: ATATACACAACCACAAAGCCACAGGCAACCATCATA...GACCCTGTATTTGAGATTCAAGTTTCCTATAACTATTCCAGTCCTATGCTCCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CCA 90 bp | AGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGATCAACAGGAATGGTTGTAATCTaGTGTTTTCAAAAGAGTACA | + |
|
Preference number: 2 (lower is better) Translates to: RESTQGAKGICNPIGGSTGMVVI*CFQKST Trigger: TGTACTCTTTTGAAAACACCAGATTACAACCATTCC...TGTTGATCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTGGATATATATTATGCATTCAGCTTAGTGTTTTTACAGGACTCCTCAGTGGTTATCCCCCTTTCCTaGTTTCTCCTCCAAAACTCC | + |
|
Preference number: 2 (lower is better) Translates to: PLDIYYAFSLVFLQDSSVVIPLS*FLLQNS Trigger: GGAGTTTTGGAGGAGAAACCAGGAAAGGGGGATAAC...CACTGAGGAGTCCTGTAAAAACACTAAGCTGAATGCATAATATATATCCAAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTGGATATATATTATGCATTCAGCTTAGTGTTTTTACAGGACTCCTCAGTGATCTTTTCCTTCTGTTaGGTTGCCTTGTCCCACCTC | + |
|
Preference number: 2 (lower is better) Translates to: PLDIYYAFSLVFLQDSSVIFSFC*VALSHL Trigger: GAGGTGGGACAAGGCAACCCAACAGAAGGAAAAGAT...CACTGAGGAGTCCTGTAAAAACACTAAGCTGAATGCATAATATATATCCAAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR TCA 90 bp | TGGGTCTCTCTGATTTTTGTTCTGGCTATTGGGAATCTTTTCCTTCTGTTGGGTCTCATTCATAGAGTTTaGGATTTAACTTTGGAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: WVSLIFVLAIGNLFLLLGLIHRV*DLTLEG Trigger: CCCTTCCAAAGTTAAATCTCAAACTCTATGAATGAG...ACCCAACAGAAGGAAAAGATTCCCAATAGCCAGAACAAAAATCAGAGAGACCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR TCA 90 bp | CCTTTGGATATATATTATGCATTCAGCTTAGTGTTTTTACAGGACTCCTCAGTGTTTGAGTTTGGAGTATaGTGGTTGCCTGTGGCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: PLDIYYAFSLVFLQDSSVFEFGV*WLPVAL Trigger: CAAAGCCACAGGCAACCATCATACTCCAAACTCAAA...CACTGAGGAGTCCTGTAAAAACACTAAGCTGAATGCATAATATATATCCAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR GCA 90 bp | CCTTTGGATATATATTATGCATTCAGCTTAGTGTTTTTACAGGACTCCTCAGTGTTGGAGTATGATGGTTaGCTGTGGCTTTGTGGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: PLDIYYAFSLVFLQDSSVLEYDG*LWLCGC Trigger: ACAACCACAAAGCCACAGGCAACCATCATACTCCAA...CACTGAGGAGTCCTGTAAAAACACTAAGCTGAATGCATAATATATATCCAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CCA 90 bp | GGGGAGCATAGGACTGGAATAGTTATAGGAAACTTGAATCTCAAATACAGGGTCTTACACAAGGTTTGTTaGTCAGGGTTAAATCTGACA | + |
|
Preference number: 2 (lower is better) Translates to: GEHRTGIVIGNLNLKYRVLHKVC*SGLNLT Trigger: TGTCAGATTTAACCCTGACCAACAAACCTTGTGTAA...GACCCTGTATTTGAGATTCAAGTTTCCTATAACTATTCCAGTCCTATGCTCCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR-3UTR CCA 90 bp | AATCTTTTCCTTCTGTTGGGTTGCCTTGTCCCACCTCAATATTATGGTTTTCGCTCCATTGGAATTGTCTaGAGAATGAGATATTCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: NLFLLLGCLVPPQYYGFRSIGIV*RMRYSW Trigger: CCAAGAATATCTCATTCTCCAGACAATTCCAATGGA...GCGAAAACCATAATATTGAGGTGGGACAAGGCAACCCAACAGAAGGAAAAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CAA 90 bp | GTCTTCTGTGTGTATACTATGGTTTTCAGCTTAGTATTTCCTTCATaGTCTTTGTACACTTTCCACAAAACAGCAAGCACAGGGTCTACA | + |
|
Preference number: 2 (lower is better) Translates to: VFCVYTMVFSLVFPS*SLYTFHKTASTGST Trigger: TGTAGACCCTGTGCTTGCTGTTTTGTGGAAAGTGTACAAAGACAATGAAGGAAATACTAAGCTGAAAACCATAGTATACACACAGAAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR TCA 90 bp | CCTTTGGATATATATTATGCATTCAGCTTAGTGTTTTTACAGGACTCCTCAGTGTTGAGTGGGTCTCTCTaGTTTTTGTTCTGGCTATTG | + |
|
Preference number: 2 (lower is better) Translates to: PLDIYYAFSLVFLQDSSVLSGSL*FLFWLL Trigger: CAATAGCCAGAACAAAAATCAGAGAGACCCACTCAA...CACTGAGGAGTCCTGTAAAAACACTAAGCTGAATGCATAATATATATCCAAAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR GCA 90 bp | GGGGAGCATAGGACTGGAATAGTTATAGGAAACTTGAATCTCAAATACAGGGTCACTTTGGAAGGGAACTaGATGACAATATACTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: GEHRTGIVIGNLNLKYRVTLEGN*MTIYFS Trigger: AGAAAAGTATATTGTCATGCAGTTCCCTTCCAAAGT...GACCCTGTATTTGAGATTCAAGTTTCCTATAACTATTCCAGTCCTATGCTCCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTGGATATATATTATGCATTCAGCTTAGTGTTTTTACAGGACTCCTCAGTGGTAAGCCAAGAAGCCTaGTTAGTTATTTGGAACTAC | + |
|
Preference number: 2 (lower is better) Translates to: PLDIYYAFSLVFLQDSSVVSQEA*LVIWNY Trigger: GTAGTTCCAAATAACTAACCAGGCTTCTTGGCTTAC...CACTGAGGAGTCCTGTAAAAACACTAAGCTGAATGCATAATATATATCCAAAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR TCA 90 bp | CCTTTGGATATATATTATGCATTCAGCTTAGTGTTTTTACAGGACTCCTCAGTGACTAGTTCATGTACTTaGATAGCCTTTCTATGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: PLDIYYAFSLVFLQDSSVTSSCT*IAFLCS Trigger: ACTGCATAGAAAGGCTATTCAAGTACATGAACTAGT...CACTGAGGAGTCCTGTAAAAACACTAAGCTGAATGCATAATATATATCCAAAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CAA 90 bp | AGAACTTTTTATGGGGAGCATAGGACTGGAATAGTTATAGGAAACTaGAATCTCAAATACAGGGTCATTGAAGATCATCTTGTTAAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: RTFYGEHRTGIVIGN*NLKYRVIEDHLVKA Trigger: AGCTTTAACAAGATGATCTTCAATGACCCTGTATTTGAGATTCAAGTTTCCTATAACTATTCCAGTCCTATGCTCCCCATAAAAAGTTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CCA 72 bp | GAGCCAAGAGTCCCACCATGTGTTTTCTCTGATTGGTaGTTTAGTCCCTGGGAGCTCTGGGGGTACTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: EPRVPPCVFSDW*FSPWELWGYWL Trigger: CAGCCAGTACCCCCAGAGCTCCCAGGGACTAAACCACCAATCAGAGAAAACACATGGTGGGACTCTTGGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CCA 72 bp | CCACTCCTGCTTCCTGGCACTGGCATTCCCCTATACTaGGGCATAGAACCTTCAAAGGACCAAGGGACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PLLLPGTGIPLY*GIEPSKDQGTL Trigger: GAGAGTCCCTTGGTCCTTTGAAGGTTCTATGCCCCAGTATAGGGGAATGCCAGTGCCAGGAAGCAGGAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CCA 72 bp | CTAGCTCCTTCATTGGGGATCCTGTGCTCTGTCCAATaGACGGCTGTGAGCATCCGCTTCTGTATTTGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LAPSLGILCSVQ*TAVSIRFCICQ Trigger: CTGACAAATACAGAAGCGGATGCTCACAGCCGTCCATTGGACAGAGCACAGGATCCCCAATGAAGGAGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CCA 72 bp | GGTGGTTTAGTCCCTGGGAGCTCTGGGGGTACTGGCTaGTTCATATTGTTGTTCCTCCTATGGGACTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GGLVPGSSGGTG*FILLFLLWDCK Trigger: TTTGCAGTCCCATAGGAGGAACAACAATATGAACCAGCCAGTACCCCCAGAGCTCCCAGGGACTAAACCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCTTTCCTTCTGTTGGGTaGCCTTGTCCCACCTCAATA | + |
|
Preference number: 3 (lower is better) Translates to: PPVEELEKVPKELKGSATFPSVG*PCPTSI Trigger: TATTGAGGTGGGACAAGGCAACCCAACAGAAGGAAA...GGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CCA 72 bp | GCATCCGAAATAGTGTCTGGGTTTGGTAGTTGTTTATaGGATGGATGTCCAGGTGGCGGAGTCTCTGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: ASEIVSGFGSCL*DGCPGGGVSGW Trigger: CCATCCAGAGACTCCGCCACCTGGACATCCATCCCATAAACAACTACCAAACCCAGACACTATTTCGGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CCA 72 bp | AAACACTTAAGTGGATGCTCACAGTCAGCTATTGGATaGAGCACAGGGCCCCCAGTGGAGGAGCTAGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KHLSGCSQSAIG*STGPPVEELEK Trigger: TTTCTCTAGCTCCTCCACTGGGGGCCCTGTGCTCCATCCAATAGCTGACTGTGAGCATCCACTTAAGTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR TCA 72 bp | GTGGCGGAGTCTCTGGATGGTCATTACTTCAGTCTCTaGTCCACACTTTGTCTCTGTAACTCCTTCCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: VAESLDGHYFSL*STLCLCNSFHG Trigger: CCCATGGAAGGAGTTACAGAGACAAAGTGTGGATCAGAGACTGAAGTAATGACCATCCAGAGACTCCGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR TCA 72 bp | GTTCCTCCTATGGGACTGCAAATCCCTTCAGCTCCTTaGGTTCTTTCTCTAGCTCCTTCATTGGGGATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VPPMGLQIPSAP*VLSLAPSLGIL Trigger: CAGGATCCCCAATGAAGGAGCTAGAGAAAGAACTCAAGGAGCTGAAGGGATTTGCAGTCCCATAGGAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR GCA 72 bp | CATGAACAGGTACAGTGCCTGGACAGAGGGATAGCATaGACATGTAAGCTTAGTGTAAGCCAAGAAGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: HEQVQCLDRGIA*TCKLSVSQEAW Trigger: CCAGGCTTCTTGGCTTACACTAAGCTTACATGTGCATGCTATCCCTCTGTCCAGGCACTGTACCTGTTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CCA 72 bp | CCACCATGTGTTTTCTCTGATTGGTGGTTTAGTCCCTaGGAGCTCTGGGGGTACTGGCTGGTTCATATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: PPCVFSDWWFSP*ELWGYWLVHIV Trigger: AACAATATGAACCAGCCAGTACCCCCAGAGCTCCCAGGGACTAAACCACCAATCAGAGAAAACACATGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCACAATGGCAGTTCTTTaGTTAAAGCAGAATGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PPVEELEKVPKELKGSATTMAVL*LKQNAE Trigger: CTCTGCATTCTGCTTTAACAAAAGAACTGCCATTGT...GGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR TCA 72 bp | CATGAGGTGAGTCATTATCTGCTGCTGTGGTTGGTGTaGAGCAACCCCATATTCCCACACCTGGGATTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HEVSHYLLLWLV*SNPIFPHLGLR Trigger: TCTTAATCCCAGGTGTGGGAATATGGGGTTGCTTCACACCAACCACAGCAGCAGATAATGACTCACCTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CCA 72 bp | TTATGGGATGGATGTCCAGGTGGCGGAGTCTCTGGATaGTCATTACTTCAGTCTCTGATCCACACTTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LWDGCPGGGVSG*SLLQSLIHTLS Trigger: AGACAAAGTGTGGATCAGAGACTGAAGTAATGACCATCCAGAGACTCCGCCACCTGGACATCCATCCCATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CCA 72 bp | GGGGGTACTGGCTGGTTCATATTGTTGTTCCTCCTATaGGACTGCAAATCCCTTCAGCTCCTTGAGTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GGTGWFILLFLL*DCKSLQLLEFF Trigger: AAAGAACTCAAGGAGCTGAAGGGATTTGCAGTCCCATAGGAGGAACAACAATATGAACCAGCCAGTACCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CAA 90 bp | TCAAATGTTATCCCCCTTTCCTGGTTTCTCCTCCAAAACTCCACTATTGCCTCTCATCCGCTTCTGTATTaGTCAGGCACTGGCAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: SNVIPLSWFLLQNSTIASHPLLY*SGTGRT Trigger: GGTTCTGCCAGTGCCTGACAAATACAGAAGCGGATG...AGAGGCAATAGTGGAGTTTTGGAGGAGAAACCAGGAAAGGGGGATAACATTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CAA 90 bp | TCAAATGTTATCCCCCTTTCCTGGTTTCTCCTCCAAAACTCCACTATTGCCTCTTCTCTAGCTCCTTCATaGGGGATCCTGTGCTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SNVIPLSWFLLQNSTIASSLAPS*GILCSV Trigger: GACAGAGCACAGGATCCCCAATGAAGGAGCTAGAGA...AGAGGCAATAGTGGAGTTTTGGAGGAGAAACCAGGAAAGGGGGATAACATTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCGAGAGGGAGTCTAAATaGAATTTATCTATCACACCA | + |
|
Preference number: 3 (lower is better) Translates to: PPVEELEKVPKELKGSATERESK*NLSITP Trigger: TGGTGTGATAGATAAATTCAATTTAGACTCCCTCTC...GGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGATCAACAGGCTCTGGCTCCATTTaGAGTTTGGAGTATGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: RESTQGAKGICNPIGGSTGSGSI*SLEYDG Trigger: ACCATCATACTCCAAACTCAAAATGGAGCCAGAGCC...TGTTGATCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR TCA 72 bp | GAAGGCAGTAAAACTATGCCTAGGAAGAGCATGAGGTaGGTCATTATCTGCTGCTGTGGTTGGTGTGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: EGSKTMPRKSMR*VIICCCGWCEA Trigger: TGCTTCACACCAACCACAGCAGCAGATAATGACTCACCTCATGCTCTTCCTAGGCATAGTTTTACTGCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR TCA 72 bp | TCTCTGAAGGCAGTAAAACTATGCCTAGGAAGAGCATaGGGTGAGTCATTATCTGCTGCTGTGGTTGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLKAVKLCLGRA*GESLSAAVVGV Trigger: CACACCAACCACAGCAGCAGATAATGACTCACCTCATGCTCTTCCTAGGCATAGTTTTACTGCCTTCAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CCA 72 bp | TTGTTTATGGGATGGATGTCCAGGTGGCGGAGTCTCTaGATGGTCATTACTTCAGTCTCTGATCCACACTTT | + |
|
Preference number: 3 (lower is better) Translates to: LFMGWMSRWRSL*MVITSVSDPHF Trigger: AAAGTGTGGATCAGAGACTGAAGTAATGACCATCCAGAGACTCCGCCACCTGGACATCCATCCCATAAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CAA 90 bp | TCAAATGTTATCCCCCTTTCCTGGTTTCTCCTCCAAAACTCCACTATTGCCTCTGAGAATGAGATATTCTaGGACTGTCTGTGGCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SNVIPLSWFLLQNSTIASENEIF*DCLWPG Trigger: ACCTGGCCACAGACAGTCCAAGAATATCTCATTCTC...AGAGGCAATAGTGGAGTTTTGGAGGAGAAACCAGGAAAGGGGGATAACATTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR TCA 72 bp | AACCTTCAAAGGACCAAGGGACTCTCCTCCCATTTATaGCCGACTAGGCCATCCTCTGCTAAATATAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: NLQRTKGLSSHL*PTRPSSAKYKA Trigger: AGCTTTATATTTAGCAGAGGATGGCCTAGTCGGTCATAAATGGGAGGAGAGTCCCTTGGTCCTTTGAAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR TCA 72 bp | ACAGGACTCCTCAGTGTGTGGTTGAGTGGGTCTCTCTaGTTTTTGTTCTGGCTATTGGGAATCTTTTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TGLLSVWLSGSL*FLFWLLGIFSF Trigger: GAAGGAAAAGATTCCCAATAGCCAGAACAAAAATCAGAGAGACCCACTCAACCACACACTGAGGAGTCCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CCA 72 bp | ACAAAGTTTGGAGGTGAGACAAAAGGATGGACCAACTaGAGACTGCCATATTCAGGGATCCATCCCATAATC | + |
|
Preference number: 3 (lower is better) Translates to: TKFGGETKGWTN*RLPYSGIHPII Trigger: GATTATGGGATGGATCCCTGAATATGGCAGTCTCCAGTTGGTCCATCCTTTTGTCTCACCTCCAAACTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CCA 72 bp | GTTACAGAGACAAAGTTTGGAGGTGAGACAAAAGGATaGACCAACTGGAGACTGCCATATTCAGGGATCCAT | + |
|
Preference number: 3 (lower is better) Translates to: VTETKFGGETKG*TNWRLPYSGIH Trigger: ATGGATCCCTGAATATGGCAGTCTCCAGTTGGTCCATCCTTTTGTCTCACCTCCAAACTTTGTCTCTGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR TCA 72 bp | AATGATTGGGTTATAGTTTATCATCTCCAAGGACCATaGACAGGTACAGTGCCTGGACAGAGGGATAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: NDWVIVYHLQGP*TGTVPGQRDSM Trigger: CATGCTATCCCTCTGTCCAGGCACTGTACCTGTTCATGGTCCTTGGAGATGATAAACTATAACCCAATCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR TCA 72 bp | AGCTTAGTGTTTTTACAGGACTCCTCAGTGTGTGGTTaGGTGGGTCTCTCTGATTTTTGTTCTGGCTATTGG | + |
|
Preference number: 3 (lower is better) Translates to: SLVFLQDSSVCG*VGLSDFCSGYW Trigger: CCAATAGCCAGAACAAAAATCAGAGAGACCCACTCAACCACACACTGAGGAGTCCTGTAAAAACACTAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CAA 90 bp | AATCTTTTCCTTCTGTTGGGTTGCCTTGTCCCACCTCAATATTATGGTTTTCGCGACAGTCTGTTTCACTaGCATCCACAGAACATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: NLFLLLGCLVPPQYYGFRDSLFH*HPQNIR Trigger: TCTGATGTTCTGTGGATGCAAGTGAAACAGACTGTC...GCGAAAACCATAATATTGAGGTGGGACAAGGCAACCCAACAGAAGGAAAAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR TCA 72 bp | TCACTTAGGCTCTGGCTCCATTTTGAGTTTGGAGTATaGTGGTTGCCTGTGGCTTTGTGGTTGTGTATATTA | + |
|
Preference number: 3 (lower is better) Translates to: SLRLWLHFEFGV*WLPVALWLCIL Trigger: TAATATACACAACCACAAAGCCACAGGCAACCATCATACTCCAAACTCAAAATGGAGCCAGAGCCTAAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR GCA 72 bp | GTTCTGGCTATTGGGAATCTTTTCCTTCTGTTGGGTTaGCTTGTCCCACCTCAATATTATGGTTTTCGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VLAIGNLFLLLG*LVPPQYYGFRF Trigger: AAAGCGAAAACCATAATATTGAGGTGGGACAAGGCAACCCAACAGAAGGAAAAGATTCCCAATAGCCAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR GCA 72 bp | GAGGTCTTGACTCTAGCTTCATATGTATCAAAAGATTaGCTAGTTGGCCATCACTGGAAAGACAGTCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: EVLTLASYVSKD*LVGHHWKDSPI Trigger: AATGGGACTGTCTTTCCAGTGATGGCCAACTAGGCAATCTTTTGATACATATGAAGCTAGAGTCAAGACCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CCA 72 bp | GGGCAGTACACATGTAATAGGTCCCTCATACTGAAGTaGAATTTCTCCTTCATGTTCAAGTACAATGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GQYTCNRSLILK*NFSFMFKYNGS Trigger: ACTGCCATTGTACTTGAACATGAAGGAGAAATTCCACTTCAGTATGAGGGACCTATTACATGTGTACTGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGATCAACACAAGGGAACTTTTCCTaGATTCAGCTACCTAAATTT | + |
|
Preference number: 3 (lower is better) Translates to: RESTQGAKGICNPIGGSTQGNFS*IQLPKF Trigger: AAATTTAGGTAGCTGAATCAAGGAAAAGTTCCCTTG...TGTTGATCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CAA 90 bp | TCAAATGTTATCCCCCTTTCCTGGTTTCTCCTCCAAAACTCCACTATTGCCTCTATGGCTGAGGTACTTTaGTTTGCTTACTGTTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SNVIPLSWFLLQNSTIASMAEVL*FAYCLR Trigger: TCTCAAACAGTAAGCAAACAAAAGTACCTCAGCCAT...AGAGGCAATAGTGGAGTTTTGGAGGAGAAACCAGGAAAGGGGGATAACATTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CAA 90 bp | ATTACTTCAGTCTCTGATCCACACTTTGTCTCTGTAACTCCTTCCATGGGTAGTACACAACTGGGGAAATaGGGAAAGGGGATAACATTA | + |
|
Preference number: 3 (lower is better) Translates to: ITSVSDPHFVSVTPSMGSTQLGK*GKGITL Trigger: TAATGTTATCCCCTTTCCCAATTTCCCCAGTTGTGT...ACTACCCATGGAAGGAGTTACAGAGACAAAGTGTGGATCAGAGACTGAAGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR TCA 72 bp | TTAGATAAGGTCTGCATGTGTTACTCCTATTGGTGTTaGACTCCTGAGCTAATTATCCTCCCGATTCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LDKVCMCYSYWC*TPELIILPIQL Trigger: AAGCTGAATCGGGAGGATAATTAGCTCAGGAGTTCAACACCAATAGGAGTAACACATGCAGACCTTATCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR TCA 72 bp | GATCCACAGCCAGATATGTGGAGAGGGAGTCTAAATTaGATTTATCTATCACACCACTCTCCTCATATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: DPQPDMWRGSLN*IYLSHHSPHIS Trigger: TGAGATATGAGGAGAGTGGTGTGATAGATAAATTCAATTTAGACTCCCTCTCCACATATCTGGCTGTGGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAGAGTTGTGAATGCTACCTTACTTCCTTGAGTTTCAGTTCCTCTGTAGTTTTGTGCAGTGGGATTTaGATTGATTTTCTACAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: EESCECYLTSLSFSSSVVLCSGI*IDFLQC Trigger: GCACTGTAGAAAATCAATCAAAATCCCACTGCACAA...AACTACAGAGGAACTGAAACTCAAGGAAGTAAGGTAGCATTCACAACTCTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR TCA 72 bp | TTTCCTCATAGATCCCTCCTTTGTGCAGTGGGATTTTaGTTGATTTTCTACAGTGCTGAAGGATGTTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: FPHRSLLCAVGF*LIFYSAEGCYR Trigger: TCTGTAACATCCTTCAGCACTGTAGAAAATCAATCAAAATCCCACTGCACAAAGGAGGGATCTATGAGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR TCA 72 bp | ACAGAATTAATTTATGATACTCCAAGGCAAAAGGTTTaGCCTGGAGGACATCATCCTGAGGTAACCCAATCA | + |
|
Preference number: 3 (lower is better) Translates to: TELIYDTPRQKV*PGGHHPEVTQS Trigger: TGATTGGGTTACCTCAGGATGATGTCCTCCAGGTCAAACCTTTTGCCTTGGAGTATCATAAATTAATTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CCA 72 bp | ACTTTGCTATTCTTCTTTTTCCTACACTTTATCCTCTaGTTTCAACCCCTATCAGAGAGAGAGAGAGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TLLFFFFLHFIL*FQPLSERERER Trigger: TCTCTCTCTCTCTCTCTCTGATAGGGGTTGAAACCAGAGGATAAAGTGTAGGAAAAAGAAGAATAGCAAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR TCA 72 bp | ACTTTGACACCATTGCATACACTAGCAAAATTTTTCTaGAAGAACCCTCATATAGCTGTCTCTTGTGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: TLTPLHTLAKFF*KNPHIAVSCET Trigger: AGTCTCACAAGAGACAGCTATATGAGGGTTCTTTCAGAAAAATTTTGCTAGTGTATGCAATGGTGTCAAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR TCA 72 bp | CAAGATATAAGATACAATTTGCAAAACACATGGAACTaGAGAAGAACGAAGACCAAAGTGTGGACACTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: QDIRYNLQNTWN*RRTKTKVWTLC Trigger: GCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTCAGTTCCATGTGTTTTGCAAATTGTATCTTATATCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTGGATATATATTATGCATTCAGCTTAGTGTTTTTACAGGACTCCTCAGTGTTTTTGTTCTGGCTATaGGGAATCTTTTCCTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PLDIYYAFSLVFLQDSSVFLFWL*GIFSFC Trigger: ACAGAAGGAAAAGATTCCCAATAGCCAGAACAAAAA...CACTGAGGAGTCCTGTAAAAACACTAAGCTGAATGCATAATATATATCCAAAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR TCA 72 bp | ATTTTCTACAGTGCTGAAGGATGTTACAGAAAAGCATaGGTACCATTGGGTTACAATTTAGAACTCTTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: IFYSAEGCYRKA*VPLGYNLELFR Trigger: CCTAAAGAGTTCTAAATTGTAACCCAATGGTACTCATGCTTTTCTGTAACATCCTTCAGCACTGTAGAAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR TCA 72 bp | GATATACTTTATGCATATGGCAAGGGAACTTTTCCTTaGTTCAGCTACCTAAATTTTACCAAAGTAGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: DILYAYGKGTFP*FSYLNFTKVES Trigger: GGACTCTACTTTGGTAAAATTTAGGTAGCTGAATCAAGGAAAAGTTCCCTTGCCATATGCATAAAGTATATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR TCA 72 bp | AAGGACCAACAACTAACAACCATTTACTCTGCCTCTTaGGTTCCTAGCATTTATATAACTTCTGAAAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: KDQQLTTIYSAS*VPSIYITSEKF Trigger: GAACTTTTCAGAAGTTATATAAATGCTAGGAACTCAAGAGGCAGAGTAAATGGTTGTTAGTTGTTGGTCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR TCA 72 bp | ATTTACCAGATTTTACATCACTATCCTCTCAAGAGGTaGAAGTTAAAAATACATAGCTGGAGGGTTCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: IYQILHHYPLKR*KLKIHSWRVLC Trigger: ACAAAGAACCCTCCAGCTATGTATTTTTAACTTTCACCTCTTGAGAGGATAGTGATGTAAAATCTGGTAAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| CDS-3UTR GCA 90 bp | CACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCATTGCGGCGCCCATCTaGAGACCGGATTCGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HRAPSGGARESTQGAKGIIAAPI*RPDSQN Trigger: ATTCTGCGAATCCGGTCTGCAGATGGGCGCCGCAAT...GATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| CDS-3UTR TCA 90 bp | CACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCCCCACCAGAATGAAGTaGGACACAGAGGTTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HRAPSGGARESTQGAKGIPTRMK*DTEVWL Trigger: CAACCAAACCTCTGTGTCTCACTTCATTCTGGTGGG...GATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| CDS-3UTR TCA 90 bp | TGGGTCTCTCTGATTTTTGTTCTGGCTATTGGGAATCTTTTCCTTCTGTTGGGTAGTGGTACCCCGAGCTaGGGTGGGTGGTGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: WVSLIFVLAIGNLFLLLGSGTPS*GGWCRP Trigger: GGGCCTGCACCACCCACCTCAGCTCGGGGTACCACT...ACCCAACAGAAGGAAAAGATTCCCAATAGCCAGAACAAAAATCAGAGAGACCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| CDS-3UTR CCA 90 bp | TCAAATGTTATCCCCCTTTCCTGGTTTCTCCTCCAAAACTCCACTATTGCCTCTTACCCCGAGCTGAGGTaGGTGGTGCAGGCCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNVIPLSWFLLQNSTIASYPELR*VVQAHQ Trigger: CTGGTGGGCCTGCACCACCCACCTCAGCTCGGGGTA...AGAGGCAATAGTGGAGTTTTGGAGGAGAAACCAGGAAAGGGGGATAACATTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CAA 72 bp | TGTCCAATGGACGGCTGTGAGCATCCGCTTCTGTATTaGTCAGGCACTGGCAGAACCTCTCAGGAGACAACT | + |
|
Preference number: 4 (lower is better) Translates to: CPMDGCEHPLLY*SGTGRTSQETT Trigger: AGTTGTCTCCTGAGAGGTTCTGCCAGTGCCTGACAAATACAGAAGCGGATGCTCACAGCCGTCCATTGGACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| CDS-3UTR TCA 90 bp | CACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCACTCGTTTGGAAAAGTaGGTGGATAGTCCCTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HRAPSGGARESTQGAKGITRLEK*VDSPSN Trigger: ATTGGAGGGACTATCCACTCACTTTTCCAAACGAGT...GATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| CDS-3UTR TCA 90 bp | TTATTTTCTGTCAGTCAGTTACATACACCTGGTAACTCTGCCCCCACGCATATTAGGGGTGCACCTCCCTaGGACCTCCCAGCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFSVSQLHTPGNSAPTHIRGAPP*DLPASS Trigger: TGAGGAGGCTGGGAGGTCTCAGGGAGGTGCACCCCT...AATATGCGTGGGGGCAGAGTTACCAGGTGTATGTAACTGACTGACAGAAAATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| CDS-3UTR CCA 90 bp | GGGGAGCATAGGACTGGAATAGTTATAGGAAACTTGAATCTCAAATACAGGGTCATAGGAACCAGTACATaGGCCGGTGGAGCCGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GEHRTGIVIGNLNLKYRVIGTST*AGGAGC Trigger: ACATCCGGCTCCACCGGCCCATGTACTGGTTCCTAT...GACCCTGTATTTGAGATTCAAGTTTCCTATAACTATTCCAGTCCTATGCTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| CDS-3UTR GCA 90 bp | AATCTTTTCCTTCTGTTGGGTTGCCTTGTCCCACCTCAATATTATGGTTTTCGCTCCCTCCAATCCAGGTaGCCAAAGCAAGGTAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: NLFLLLGCLVPPQYYGFRSLQSR*PKQGSY Trigger: GTAACTACCTTGCTTTGGGCACCTGGATTGGAGGGA...GCGAAAACCATAATATTGAGGTGGGACAAGGCAACCCAACAGAAGGAAAAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| CDS-3UTR GCA 90 bp | GGGGAGCATAGGACTGGAATAGTTATAGGAAACTTGAATCTCAAATACAGGGTCCAGCCTCCTCAAAGCTaGCTTCATCTGTTTGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GEHRTGIVIGNLNLKYRVQPPQS*LHLFVS Trigger: CGAAACAAACAGATGAAGGCAGCTTTGAGGAGGCTG...GACCCTGTATTTGAGATTCAAGTTTCCTATAACTATTCCAGTCCTATGCTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| CDS-3UTR CCA 90 bp | GGGGAGCATAGGACTGGAATAGTTATAGGAAACTTGAATCTCAAATACAGGGTCGTTTGGAAAAGTGAGTaGATAGTCCCTCCAATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GEHRTGIVIGNLNLKYRVVWKSE*IVPPIQ Trigger: CTGGATTGGAGGGACTATCCACTCACTTTTCCAAAC...GACCCTGTATTTGAGATTCAAGTTTCCTATAACTATTCCAGTCCTATGCTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
||
| 3UTR CAA 72 bp | TGTTCTGGCTATTGGGAATCTTTTCCTTCTGTTGGGTaGCCTTGTCCCACCTCAATATTATGGTTTTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSGYWESFPSVG*PCPTSILWFSL Trigger: AAGCGAAAACCATAATATTGAGGTGGGACAAGGCAACCCAACAGAAGGAAAAGATTCCCAATAGCCAGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CAA 72 bp | TGTTCAGAATGTTGTGGGATGTGTTTGTCCTTGGCTTaGATGAGAGGTGATACTTTTGTGTTTACAGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: CSECCGMCLSLA*MRGDTFVFTVG Trigger: CCCTACTGTAAACACAAAAGTATCACCTCTCATCAAAGCCAAGGACAAACACATCCCACAACATTCTGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CAA 72 bp | CCACACTTTGTCTCTGTAACTCCTTCCATGGGTAGTTaGTTCCCCTTCGAAGAATTATCAAGTATCTACACT | + |
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Preference number: 4 (lower is better) Translates to: PHFVSVTPSMGS*FPFEELSSIYT Trigger: AGTGTAGATACTTGATAATTCTTCGAAGGGGAACAAACTACCCATGGAAGGAGTTACAGAGACAAAGTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CAA 72 bp | CAAGCACAGGGTCTACACGTCCCTCCAACAGGTCCTTaGGATATATATTATGCATTCAGCTTAGTGTTTTTA | + |
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Preference number: 4 (lower is better) Translates to: QAQGLHVPPTGP*DIYYAFSLVFL Trigger: TAAAAACACTAAGCTGAATGCATAATATATATCCAAAGGACCTGTTGGAGGGACGTGTAGACCCTGTGCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CAA 72 bp | AGATCCACAGCCAGATATGTGGAGAGGGAGTCTAAATaGAATTTATCTATCACACCACTCTCCTCATATCTC | + |
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Preference number: 4 (lower is better) Translates to: RSTARYVERESK*NLSITPLSSYL Trigger: GAGATATGAGGAGAGTGGTGTGATAGATAAATTCAATTTAGACTCCCTCTCCACATATCTGGCTGTGGATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| CDS-3UTR GCA 90 bp | GAAGAGAGTTGTGAATGCTACCTTACTTCCTTGAGTTTCAGTTCCTCTGTAGTTAAAGAAAGCATTCAGTaGAGCCCAGGAAATGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: EESCECYLTSLSFSSSVVKESIQ*SPGNGK Trigger: CTTTCCATTTCCTGGGCTGCACTGAATGCTTTCTTT...AACTACAGAGGAACTGAAACTCAAGGAAGTAAGGTAGCATTCACAACTCTCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CAA 72 bp | GATCAACATTATGAACTAACCAGTACCCCGGAGGTCTaGACTCTAGCTTCATATGTATCAAAAGATTGCCTA | + |
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Preference number: 4 (lower is better) Translates to: DQHYELTSTPEV*TLASYVSKDCL Trigger: TAGGCAATCTTTTGATACATATGAAGCTAGAGTCAAGACCTCCGGGGTACTGGTTAGTTCATAATGTTGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CAA 72 bp | GATGATTGTTCAGAATGTTGTGGGATGTGTTTGTCCTaGGCTTTGATGAGAGGTGATACTTTTGTGTTTACA | + |
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Preference number: 4 (lower is better) Translates to: DDCSECCGMCLS*ALMRGDTFVFT Trigger: TGTAAACACAAAAGTATCACCTCTCATCAAAGCCAAGGACAAACACATCCCACAACATTCTGAACAATCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CAA 72 bp | ATTTTTGTTCTGGCTATTGGGAATCTTTTCCTTCTGTaGGGTTGCCTTGTCCCACCTCAATATTATGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: IFVLAIGNLFLL*GCLVPPQYYGF Trigger: AAAACCATAATATTGAGGTGGGACAAGGCAACCCAACAGAAGGAAAAGATTCCCAATAGCCAGAACAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CAA 72 bp | AACAAAGTGAGCTCAGGTAAGATGGCTGAGGTACTTTaGTTTGCTTACTGTTTGAGAAAACATTTGGAGATT | + |
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Preference number: 4 (lower is better) Translates to: NKVSSGKMAEVL*FAYCLRKHLEI Trigger: AATCTCCAAATGTTTTCTCAAACAGTAAGCAAACAAAAGTACCTCAGCCATCTTACCTGAGCTCACTTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CAA 72 bp | TATGGGGAGCATAGGACTGGAATAGTTATAGGAAACTaGAATCTCAAATACAGGGTCATTGAAGATCATCTT | + |
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Preference number: 4 (lower is better) Translates to: YGEHRTGIVIGN*NLKYRVIEDHL Trigger: AAGATGATCTTCAATGACCCTGTATTTGAGATTCAAGTTTCCTATAACTATTCCAGTCCTATGCTCCCCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| 3UTR CAA 72 bp | GTGTATACTATGGTTTTCAGCTTAGTATTTCCTTCATaGTCTTTGTACACTTTCCACAAAACAGCAAGCACA | + |
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Preference number: 4 (lower is better) Translates to: VYTMVFSLVFPS*SLYTFHKTAST Trigger: TGTGCTTGCTGTTTTGTGGAAAGTGTACAAAGACAATGAAGGAAATACTAAGCTGAAAACCATAGTATACAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| CDS-3UTR CAA 90 bp | CCCCCAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCAGGTAGAGAAGGCATaGCGGCGCCCATCTGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: PPVEELEKVPKELKGSATQVEKA*RRPSAD Trigger: GTCTGCAGATGGGCGCCGCAATGCCTTCTCTACCTG...GGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCACTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215956.3 |
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| CDS CCA 90 bp | ACTCGGTTTGGGCCGCAGAAAGGCAGCCTGAATATGAAACTCGTTTaGAAAAGTGAGTGGATAGTCCCTCCAATCCAGGTGCCCAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: TRFGPQKGSLNMKLV*KSEWIVPPIQVPKA Trigger: TGCTTTGGGCACCTGGATTGGAGGGACTATCCACTCACTTTTCCAAACGAGTTTCATATTCAGGCTGCCTTTCTGCGGCCCAAACCGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059859.5 ENSMUST00000215956.3 |
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| CDS TCA 90 bp | TGGGCCGCAGAAAGGCAGCCTGAATATGAAACTCGTTTGGAAAAGTaGGTGGATAGTCCCTCCAATCCAGGTGCCCAAAGCAAGGTAGTT | + |
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Preference number: 5 (lower is better) Translates to: WAAERQPEYETRLEK*VDSPSNPGAQSKVV Trigger: AACTACCTTGCTTTGGGCACCTGGATTGGAGGGACTATCCACTCACTTTTCCAAACGAGTTTCATATTCAGGCTGCCTTTCTGCGGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059859.5 ENSMUST00000215956.3 |
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| CDS TCA 72 bp | CCCCGAGCTGAGGTGGGTGGTGCAGGCCCACCAGAATaGAGTGAGACACAGAGGTTTGGTTGCCGCTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: PRAEVGGAGPPE*SETQRFGCRFA Trigger: TGCAAAGCGGCAACCAAACCTCTGTGTCTCACTTCATTCTGGTGGGCCTGCACCACCCACCTCAGCTCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059859.5 ENSMUST00000215956.3 |
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| CDS CCA 72 bp | GGGCCGCAGAAAGGCAGCCTGAATATGAAACTCGTTTaGAAAAGTGAGTGGATAGTCCCTCCAATCCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: GPQKGSLNMKLV*KSEWIVPPIQV Trigger: CACCTGGATTGGAGGGACTATCCACTCACTTTTCCAAACGAGTTTCATATTCAGGCTGCCTTTCTGCGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059859.5 ENSMUST00000215956.3 |
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| CDS CCA 72 bp | GGCAGCCTGAATATGAAACTCGTTTGGAAAAGTGAGTaGATAGTCCCTCCAATCCAGGTGCCCAAAGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: GSLNMKLVWKSE*IVPPIQVPKAR Trigger: CCTTGCTTTGGGCACCTGGATTGGAGGGACTATCCACTCACTTTTCCAAACGAGTTTCATATTCAGGCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059859.5 ENSMUST00000215956.3 |
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| CDS TCA 72 bp | GAAAGGCAGCCTGAATATGAAACTCGTTTGGAAAAGTaGGTGGATAGTCCCTCCAATCCAGGTGCCCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: ERQPEYETRLEK*VDSPSNPGAQS Trigger: GCTTTGGGCACCTGGATTGGAGGGACTATCCACTCACTTTTCCAAACGAGTTTCATATTCAGGCTGCCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059859.5 ENSMUST00000215956.3 |
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