RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR980 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000060254

Ensembl transcript IDs: ENSMUST00000073932.4, ENSMUST00000216463.3

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGTGTCTGTCTTTCTTTGTTGCGAAGCAGGTTATCTTTGCCATGTaGACATTTGCCTCTGTCTTTATTTTTCAATCTCCTAGAGCTTTT +
Preference number: 1 (lower is better)
Translates to: RCLSFFVAKQVIFAM*TFASVFIFQSPRAF
Trigger: AAAAGCTCTAGGAGATTGAAAAATAAAGACAGAGGCAAATGTTCACATGGCAAAGATAACCTGCTTCGCAACAAAGAAAGACAGACACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216463.3
3UTR TCA 90 bp AGTCCAATGTATTCTAATTTGCACAAATACGTCAAAATAACTTGTTaGAGGTGTCTGTCTTTCTTTGTTGCGAAGCAGGTTATCTTTGCC +
Preference number: 1 (lower is better)
Translates to: SPMYSNLHKYVKITC*RCLSFFVAKQVIFA
Trigger: GGCAAAGATAACCTGCTTCGCAACAAAGAAAGACAGACACCTTCAACAAGTTATTTTGACGTATTTGTGCAAATTAGAATACATTGGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216463.3
3UTR CAA 90 bp TGTCTTTCTTTGTTGCGAAGCAGGTTATCTTTGCCATGTGAACATTaGCCTCTGTCTTTATTTTTCAATCTCCTAGAGCTTTTGTTAAAC +
Preference number: 2 (lower is better)
Translates to: CLSLLRSRLSLPCEH*PLSLFFNLLELLLN
Trigger: GTTTAACAAAAGCTCTAGGAGATTGAAAAATAAAGACAGAGGCAAATGTTCACATGGCAAAGATAACCTGCTTCGCAACAAAGAAAGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216463.3
3UTR-3UTR CAA 90 bp AGAGCTCCTGAAATTGAAATGTTAGACTGTTGTAAGCTTTCATGTATGCTGGAACCCTCACACTGGATCTaGACCACATCACAATGCTAT +
Preference number: 3 (lower is better)
Translates to: RAPEIEMLDCCKLSCMLEPSHWI*TTSQCY
Trigger: ATAGCATTGTGATGTGGTCAAGATCCAGTGTGAGGG...TTCCAGCATACATGAAAGCTTACAACAGTCTAACATTTCAATTTCAGGAGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216463.3
3UTR TCA 72 bp CATTTGCATGCCATAAACCTTTTAGAAAGCAATGTATaGGCTCAGCCTAAAGAAAGGCAATTTAGCCCTCAC +
Preference number: 3 (lower is better)
Translates to: HLHAINLLESNV*AQPKERQFSPH
Trigger: GTGAGGGCTAAATTGCCTTTCTTTAGGCTGAGCTCATACATTGCTTTCTAAAAGGTTTATGGCATGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216463.3
3UTR TCA 72 bp CAGGTTCTCTACAAAAACATCGATACTCTTAACCAATaGACACCTCTAAAATCTAAATACTTGGCGTTTCAT +
Preference number: 3 (lower is better)
Translates to: QVLYKNIDTLNQ*TPLKSKYLAFH
Trigger: ATGAAACGCCAAGTATTTAGATTTTAGAGGTGTTCATTGGTTAAGAGTATCGATGTTTTTGTAGAGAACCTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216463.3
CDS-3UTR TCA 90 bp ATATGCACACTTGATACTTGTGAAGACCAGAATAGGGTGTCAGAGCTCCTGAAAAGTGCAGGGAACCAGTaGTCCATGTTCCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: ICTLDTCEDQNRVSELLKSAGNQ*SMFLLP
Trigger: TGGCAGCAGGAACATGGATCACTGGTTCCCTGCACT...TTTCAGGAGCTCTGACACCCTATTCTGGTCTTCACAAGTATCAAGTGTGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216463.3
CDS-3UTR CCA 90 bp ATATGCACACTTGATACTTGTGAAGACCAGAATAGGGTGTCAGAGCTCCTGAAAAGATCCCAAAGAGCATaGAGTCCAGGACTGGTGGAT +
Preference number: 4 (lower is better)
Translates to: ICTLDTCEDQNRVSELLKRSQRA*SPGLVD
Trigger: ATCCACCAGTCCTGGACTCCATGCTCTTTGGGATCT...TTTCAGGAGCTCTGACACCCTATTCTGGTCTTCACAAGTATCAAGTGTGCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216463.3
CDS-3UTR TCA 90 bp AGAGCTCCTGAAATTGAAATGTTAGACTGTTGTAAGCTTTCATGTATGCTGGAATGGATGGGGAAGACCTaGGAGGAAGAACGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: RAPEIEMLDCCKLSCMLEWMGKT*EEERGH
Trigger: GTGACCACGTTCTTCCTCTCAGGTCTTCCCCATCCA...TTCCAGCATACATGAAAGCTTACAACAGTCTAACATTTCAATTTCAGGAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216463.3
CDS-3UTR GCA 90 bp AGAGCTCCTGAAATTGAAATGTTAGACTGTTGTAAGCTTTCATGTATGCTGGAAGATCCATGTTCCTGCTaGCAGGAGGGCACACACTCT +
Preference number: 4 (lower is better)
Translates to: RAPEIEMLDCCKLSCMLEDPCSC*QEGTHS
Trigger: AGAGTGTGTGCCCTCCTGGCAGCAGGAACATGGATC...TTCCAGCATACATGAAAGCTTACAACAGTCTAACATTTCAATTTCAGGAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216463.3
CDS-3UTR GCA 90 bp AGAGCTCCTGAAATTGAAATGTTAGACTGTTGTAAGCTTTCATGTATGCTGGAAAGTGATCCATGTTCCTaGTGCCAGGAGGGCACACAC +
Preference number: 4 (lower is better)
Translates to: RAPEIEMLDCCKLSCMLESDPCS*CQEGTH
Trigger: GTGTGTGCCCTCCTGGCAGCAGGAACATGGATCACT...TTCCAGCATACATGAAAGCTTACAACAGTCTAACATTTCAATTTCAGGAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216463.3
CDS-3UTR CCA 90 bp AGAGCTCCTGAAATTGAAATGTTAGACTGTTGTAAGCTTTCATGTATGCTGGAATCCAGGACTGGTGGATaGGGAAGACCTGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RAPEIEMLDCCKLSCMLESRTGG*GRPERK
Trigger: CTTCCTCTCAGGTCTTCCCCATCCACCAGTCCTGGA...TTCCAGCATACATGAAAGCTTACAACAGTCTAACATTTCAATTTCAGGAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216463.3
CDS-3UTR TCA 90 bp ATATGCACACTTGATACTTGTGAAGACCAGAATAGGGTGTCAGAGCTCCTGAAACAATGTTCACAAAGATaGCCATCTCGATGGCAGATG +
Preference number: 4 (lower is better)
Translates to: ICTLDTCEDQNRVSELLKQCSQR*PSRWQM
Trigger: CATCTGCCATCGAGATGGTCATCTTTGTGAACATTG...TTTCAGGAGCTCTGACACCCTATTCTGGTCTTCACAAGTATCAAGTGTGCATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216463.3
CDS-3UTR GCA 90 bp AGAGCTCCTGAAATTGAAATGTTAGACTGTTGTAAGCTTTCATGTATGCTGGAAGATGGCAGATGTGTCTaGACAGGCCAGCTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: RAPEIEMLDCCKLSCMLEDGRCV*TGQLED
Trigger: ATCCTCAAGCTGGCCTGTGCAGACACATCTGCCATC...TTCCAGCATACATGAAAGCTTACAACAGTCTAACATTTCAATTTCAGGAGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216463.3
CDS-3UTR CCA 90 bp AGAGCTCCTGAAATTGAAATGTTAGACTGTTGTAAGCTTTCATGTATGCTGGAACAGCTTGAGGATGGGTaGTCCATCACAGAAATAATG +
Preference number: 4 (lower is better)
Translates to: RAPEIEMLDCCKLSCMLEQLEDG*SITEIM
Trigger: CATTATTTCTGTGATGGACCACCCATCCTCAAGCTG...TTCCAGCATACATGAAAGCTTACAACAGTCTAACATTTCAATTTCAGGAGCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216463.3
3UTR CAA 72 bp TTTTTCTTCAAATATGTATGTTTACCATATGCACACTaGATACTTGTGAAGACCAGAATAGGGTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: FFFKYVCLPYAH*ILVKTRIGCQS
Trigger: GCTCTGACACCCTATTCTGGTCTTCACAAGTATCAAGTGTGCATATGGTAAACATACATATTTGAAGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216463.3
CDS GCA 72 bp ACGATGCAGTGTGAGGCACATGTTTGGAAAGCTCTGTaGCGGCCCTCTGAAGTGCGAATCCTCAGGATGGAG +
Preference number: 6 (lower is better)
Translates to: TMQCEAHVWKAL*RPSEVRILRME
Trigger: CTCCATCCTGAGGATTCGCACTTCAGAGGGCCGGCACAGAGCTTTCCAAACATGTGCCTCACACTGCATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073932.4
ENSMUST00000216463.3