Pregenerated sensors for OLFR980 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060254Ensembl transcript IDs: ENSMUST00000073932.4, ENSMUST00000216463.3
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AGGTGTCTGTCTTTCTTTGTTGCGAAGCAGGTTATCTTTGCCATGTaGACATTTGCCTCTGTCTTTATTTTTCAATCTCCTAGAGCTTTT | + |
Preference number: 1 (lower is better) Translates to: RCLSFFVAKQVIFAM*TFASVFIFQSPRAF Trigger: AAAAGCTCTAGGAGATTGAAAAATAAAGACAGAGGCAAATGTTCACATGGCAAAGATAACCTGCTTCGCAACAAAGAAAGACAGACACCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216463.3 |
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3UTR TCA 90 bp | AGTCCAATGTATTCTAATTTGCACAAATACGTCAAAATAACTTGTTaGAGGTGTCTGTCTTTCTTTGTTGCGAAGCAGGTTATCTTTGCC | + |
Preference number: 1 (lower is better) Translates to: SPMYSNLHKYVKITC*RCLSFFVAKQVIFA Trigger: GGCAAAGATAACCTGCTTCGCAACAAAGAAAGACAGACACCTTCAACAAGTTATTTTGACGTATTTGTGCAAATTAGAATACATTGGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216463.3 |
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3UTR CAA 90 bp | TGTCTTTCTTTGTTGCGAAGCAGGTTATCTTTGCCATGTGAACATTaGCCTCTGTCTTTATTTTTCAATCTCCTAGAGCTTTTGTTAAAC | + |
Preference number: 2 (lower is better) Translates to: CLSLLRSRLSLPCEH*PLSLFFNLLELLLN Trigger: GTTTAACAAAAGCTCTAGGAGATTGAAAAATAAAGACAGAGGCAAATGTTCACATGGCAAAGATAACCTGCTTCGCAACAAAGAAAGACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216463.3 |
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3UTR-3UTR CAA 90 bp | AGAGCTCCTGAAATTGAAATGTTAGACTGTTGTAAGCTTTCATGTATGCTGGAACCCTCACACTGGATCTaGACCACATCACAATGCTAT | + |
Preference number: 3 (lower is better) Translates to: RAPEIEMLDCCKLSCMLEPSHWI*TTSQCY Trigger: ATAGCATTGTGATGTGGTCAAGATCCAGTGTGAGGG...TTCCAGCATACATGAAAGCTTACAACAGTCTAACATTTCAATTTCAGGAGCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216463.3 |
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3UTR TCA 72 bp | CATTTGCATGCCATAAACCTTTTAGAAAGCAATGTATaGGCTCAGCCTAAAGAAAGGCAATTTAGCCCTCAC | + |
Preference number: 3 (lower is better) Translates to: HLHAINLLESNV*AQPKERQFSPH Trigger: GTGAGGGCTAAATTGCCTTTCTTTAGGCTGAGCTCATACATTGCTTTCTAAAAGGTTTATGGCATGCAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216463.3 |
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3UTR TCA 72 bp | CAGGTTCTCTACAAAAACATCGATACTCTTAACCAATaGACACCTCTAAAATCTAAATACTTGGCGTTTCAT | + |
Preference number: 3 (lower is better) Translates to: QVLYKNIDTLNQ*TPLKSKYLAFH Trigger: ATGAAACGCCAAGTATTTAGATTTTAGAGGTGTTCATTGGTTAAGAGTATCGATGTTTTTGTAGAGAACCTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216463.3 |
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CDS-3UTR TCA 90 bp | ATATGCACACTTGATACTTGTGAAGACCAGAATAGGGTGTCAGAGCTCCTGAAAAGTGCAGGGAACCAGTaGTCCATGTTCCTGCTGCCA | + |
Preference number: 4 (lower is better) Translates to: ICTLDTCEDQNRVSELLKSAGNQ*SMFLLP Trigger: TGGCAGCAGGAACATGGATCACTGGTTCCCTGCACT...TTTCAGGAGCTCTGACACCCTATTCTGGTCTTCACAAGTATCAAGTGTGCATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216463.3 |
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CDS-3UTR CCA 90 bp | ATATGCACACTTGATACTTGTGAAGACCAGAATAGGGTGTCAGAGCTCCTGAAAAGATCCCAAAGAGCATaGAGTCCAGGACTGGTGGAT | + |
Preference number: 4 (lower is better) Translates to: ICTLDTCEDQNRVSELLKRSQRA*SPGLVD Trigger: ATCCACCAGTCCTGGACTCCATGCTCTTTGGGATCT...TTTCAGGAGCTCTGACACCCTATTCTGGTCTTCACAAGTATCAAGTGTGCATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216463.3 |
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CDS-3UTR TCA 90 bp | AGAGCTCCTGAAATTGAAATGTTAGACTGTTGTAAGCTTTCATGTATGCTGGAATGGATGGGGAAGACCTaGGAGGAAGAACGTGGTCAC | + |
Preference number: 4 (lower is better) Translates to: RAPEIEMLDCCKLSCMLEWMGKT*EEERGH Trigger: GTGACCACGTTCTTCCTCTCAGGTCTTCCCCATCCA...TTCCAGCATACATGAAAGCTTACAACAGTCTAACATTTCAATTTCAGGAGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216463.3 |
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CDS-3UTR GCA 90 bp | AGAGCTCCTGAAATTGAAATGTTAGACTGTTGTAAGCTTTCATGTATGCTGGAAGATCCATGTTCCTGCTaGCAGGAGGGCACACACTCT | + |
Preference number: 4 (lower is better) Translates to: RAPEIEMLDCCKLSCMLEDPCSC*QEGTHS Trigger: AGAGTGTGTGCCCTCCTGGCAGCAGGAACATGGATC...TTCCAGCATACATGAAAGCTTACAACAGTCTAACATTTCAATTTCAGGAGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216463.3 |
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CDS-3UTR GCA 90 bp | AGAGCTCCTGAAATTGAAATGTTAGACTGTTGTAAGCTTTCATGTATGCTGGAAAGTGATCCATGTTCCTaGTGCCAGGAGGGCACACAC | + |
Preference number: 4 (lower is better) Translates to: RAPEIEMLDCCKLSCMLESDPCS*CQEGTH Trigger: GTGTGTGCCCTCCTGGCAGCAGGAACATGGATCACT...TTCCAGCATACATGAAAGCTTACAACAGTCTAACATTTCAATTTCAGGAGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216463.3 |
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CDS-3UTR CCA 90 bp | AGAGCTCCTGAAATTGAAATGTTAGACTGTTGTAAGCTTTCATGTATGCTGGAATCCAGGACTGGTGGATaGGGAAGACCTGAGAGGAAG | + |
Preference number: 4 (lower is better) Translates to: RAPEIEMLDCCKLSCMLESRTGG*GRPERK Trigger: CTTCCTCTCAGGTCTTCCCCATCCACCAGTCCTGGA...TTCCAGCATACATGAAAGCTTACAACAGTCTAACATTTCAATTTCAGGAGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216463.3 |
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CDS-3UTR TCA 90 bp | ATATGCACACTTGATACTTGTGAAGACCAGAATAGGGTGTCAGAGCTCCTGAAACAATGTTCACAAAGATaGCCATCTCGATGGCAGATG | + |
Preference number: 4 (lower is better) Translates to: ICTLDTCEDQNRVSELLKQCSQR*PSRWQM Trigger: CATCTGCCATCGAGATGGTCATCTTTGTGAACATTG...TTTCAGGAGCTCTGACACCCTATTCTGGTCTTCACAAGTATCAAGTGTGCATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216463.3 |
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CDS-3UTR GCA 90 bp | AGAGCTCCTGAAATTGAAATGTTAGACTGTTGTAAGCTTTCATGTATGCTGGAAGATGGCAGATGTGTCTaGACAGGCCAGCTTGAGGAT | + |
Preference number: 4 (lower is better) Translates to: RAPEIEMLDCCKLSCMLEDGRCV*TGQLED Trigger: ATCCTCAAGCTGGCCTGTGCAGACACATCTGCCATC...TTCCAGCATACATGAAAGCTTACAACAGTCTAACATTTCAATTTCAGGAGCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216463.3 |
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CDS-3UTR CCA 90 bp | AGAGCTCCTGAAATTGAAATGTTAGACTGTTGTAAGCTTTCATGTATGCTGGAACAGCTTGAGGATGGGTaGTCCATCACAGAAATAATG | + |
Preference number: 4 (lower is better) Translates to: RAPEIEMLDCCKLSCMLEQLEDG*SITEIM Trigger: CATTATTTCTGTGATGGACCACCCATCCTCAAGCTG...TTCCAGCATACATGAAAGCTTACAACAGTCTAACATTTCAATTTCAGGAGCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216463.3 |
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3UTR CAA 72 bp | TTTTTCTTCAAATATGTATGTTTACCATATGCACACTaGATACTTGTGAAGACCAGAATAGGGTGTCAGAGC | + |
Preference number: 4 (lower is better) Translates to: FFFKYVCLPYAH*ILVKTRIGCQS Trigger: GCTCTGACACCCTATTCTGGTCTTCACAAGTATCAAGTGTGCATATGGTAAACATACATATTTGAAGAAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216463.3 |
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CDS GCA 72 bp | ACGATGCAGTGTGAGGCACATGTTTGGAAAGCTCTGTaGCGGCCCTCTGAAGTGCGAATCCTCAGGATGGAG | + |
Preference number: 6 (lower is better) Translates to: TMQCEAHVWKAL*RPSEVRILRME Trigger: CTCCATCCTGAGGATTCGCACTTCAGAGGGCCGGCACAGAGCTTTCCAAACATGTGCCTCACACTGCATCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073932.4 ENSMUST00000216463.3 |