RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR979 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000059473

Ensembl transcript IDs: ENSMUST00000080835.4, ENSMUST00000215523.2

Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGCTTCTGGGATTTTATTCCACTCCTCCTTCCTTGCATAAAGGTTaGGTAGGTGGATTTTGTGTACCTCCTGTGTGTAACGACACATGT +
Preference number: 1 (lower is better)
Translates to: QLLGFYSTPPSLHKG*VGGFCVPPVCNDTC
Trigger: ACATGTGTCGTTACACACAGGAGGTACACAAAATCCACCTACTCAACCTTTATGCAAGGAAGGAGGAGTGGAATAAAATCCCAGAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
3UTR GCA 90 bp CCATCTCCAAAAGAGATTGATTTATTCCAATCTTCCCCAACCTCTTaGTCTATCCTAATGTGGCAATCTAGTCTGAGAATTAGCACACTT +
Preference number: 1 (lower is better)
Translates to: PSPKEIDLFQSSPTS*SILMWQSSLRISTL
Trigger: AAGTGTGCTAATTCTCAGACTAGATTGCCACATTAGGATAGAGCAAGAGGTTGGGGAAGATTGGAATAAATCAATCTCTTTTGGAGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
3UTR-3UTR CCA 90 bp TTGAGCTTACCTTTCCCCCACTGCCTTATTGTTACATCTCTTGCTTATGACTTTGGAGGTAGAGGCAGGTaGATTTCTGAGTTCGAGGCC +
Preference number: 2 (lower is better)
Translates to: LSLPFPHCLIVTSLAYDFGGRGR*ISEFEA
Trigger: GGCCTCGAACTCAGAAATCCACCTGCCTCTACCTCC...AAAGTCATAAGCAAGAGATGTAACAATAAGGCAGTGGGGGAAAGGTAAGCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
3UTR-3UTR CCA 90 bp TTGAGCTTACCTTTCCCCCACTGCCTTATTGTTACATCTCTTGCTTATGACTTTTTAAAAGCAAGCATCTaGGCATGGTGGCGCATGCCT +
Preference number: 2 (lower is better)
Translates to: LSLPFPHCLIVTSLAYDFLKASI*AWWRMP
Trigger: AGGCATGCGCCACCATGCCCAGATGCTTGCTTTTAA...AAAGTCATAAGCAAGAGATGTAACAATAAGGCAGTGGGGGAAAGGTAAGCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
3UTR-3UTR TCA 90 bp ACAAAGCGACTGGAGAGAACTGACTACCCTTTGTCTAGAAGGCATCAATTTTCAACTATGTTTTACCAATaGGAAAGTGTCTCTCCTGGT +
Preference number: 2 (lower is better)
Translates to: TKRLERTDYPLSRRHQFSTMFYQ*ESVSPG
Trigger: ACCAGGAGAGACACTTTCTCATTGGTAAAACATAGT...TGAAAATTGATGCCTTCTAGACAAAGGGTAGTCAGTTCTCTCCAGTCGCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
3UTR-3UTR TCA 90 bp ACAAAGCGACTGGAGAGAACTGACTACCCTTTGTCTAGAAGGCATCAATTTTCATCCTTGCATAAAGGTTaGGTAGGTGGATTTTGTGTA +
Preference number: 2 (lower is better)
Translates to: TKRLERTDYPLSRRHQFSSLHKG*VGGFCV
Trigger: TACACAAAATCCACCTACTCAACCTTTATGCAAGGA...TGAAAATTGATGCCTTCTAGACAAAGGGTAGTCAGTTCTCTCCAGTCGCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
3UTR-3UTR CCA 90 bp ACAAAGCGACTGGAGAGAACTGACTACCCTTTGTCTAGAAGGCATCAATTTTCACATCATAATTCTTCCTaGATAGTCACAGGTCCCAAA +
Preference number: 2 (lower is better)
Translates to: TKRLERTDYPLSRRHQFSHHNSS*IVTGPK
Trigger: TTTGGGACCTGTGACTATCCAGGAAGAATTATGATG...TGAAAATTGATGCCTTCTAGACAAAGGGTAGTCAGTTCTCTCCAGTCGCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
3UTR-3UTR TCA 90 bp ACAAAGCGACTGGAGAGAACTGACTACCCTTTGTCTAGAAGGCATCAATTTTCACAAAACCTCAAACTATaGTCACATATGTCACATGTC +
Preference number: 2 (lower is better)
Translates to: TKRLERTDYPLSRRHQFSQNLKL*SHMSHV
Trigger: GACATGTGACATATGTGATCATAGTTTGAGGTTTTG...TGAAAATTGATGCCTTCTAGACAAAGGGTAGTCAGTTCTCTCCAGTCGCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
3UTR-3UTR TCA 90 bp TTGAGCTTACCTTTCCCCCACTGCCTTATTGTTACATCTCTTGCTTATGACTTTCTGATGTTGAATAGCTaGAAAGTCTATTTACCAGTG +
Preference number: 2 (lower is better)
Translates to: LSLPFPHCLIVTSLAYDFLMLNS*KVYLPV
Trigger: CACTGGTAAATAGACTTTTCAGCTATTCAACATCAG...AAAGTCATAAGCAAGAGATGTAACAATAAGGCAGTGGGGGAAAGGTAAGCTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
3UTR-3UTR TCA 90 bp TTGAGCTTACCTTTCCCCCACTGCCTTATTGTTACATCTCTTGCTTATGACTTTTCCCAAAATGTGTATTaGGCTAGAAACATAACTGGA +
Preference number: 2 (lower is better)
Translates to: LSLPFPHCLIVTSLAYDFSQNVY*ARNITG
Trigger: TCCAGTTATGTTTCTAGCTCAATACACATTTTGGGA...AAAGTCATAAGCAAGAGATGTAACAATAAGGCAGTGGGGGAAAGGTAAGCTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
3UTR-3UTR CCA 90 bp TTGAGCTTACCTTTCCCCCACTGCCTTATTGTTACATCTCTTGCTTATGACTTTTGCTCTATCCTAATGTaGCAATCTAGTCTGAGAATT +
Preference number: 2 (lower is better)
Translates to: LSLPFPHCLIVTSLAYDFCSILM*QSSLRI
Trigger: AATTCTCAGACTAGATTGCCACATTAGGATAGAGCA...AAAGTCATAAGCAAGAGATGTAACAATAAGGCAGTGGGGGAAAGGTAAGCTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
3UTR TCA 72 bp GGATCATGTTCGCCCTTTTCCTCCTCATCTAAAACCTaGGTACCTGACACATGCATCTCTCTGTCAATTTCA +
Preference number: 3 (lower is better)
Translates to: GSCSPFSSSSKT*VPDTCISLSIS
Trigger: TGAAATTGACAGAGAGATGCATGTGTCAGGTACTCAGGTTTTAGATGAGGAGGAAAAGGGCGAACATGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
3UTR TCA 72 bp TACCTCCTGTGTGTAACGACACATGTTTTGAGTTCATaGGTGCAACTATCCTGCCATCTCCAAAAGAGATTG +
Preference number: 3 (lower is better)
Translates to: YLLCVTTHVLSS*VQLSCHLQKRL
Trigger: CAATCTCTTTTGGAGATGGCAGGATAGTTGCACTCATGAACTCAAAACATGTGTCGTTACACACAGGAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
3UTR TCA 72 bp GGATTTTATTCCACTCCTCCTTCCTTGCATAAAGGTTaGGTAGGTGGATTTTGTGTACCTCCTGTGTGTAAC +
Preference number: 3 (lower is better)
Translates to: GFYSTPPSLHKG*VGGFCVPPVCN
Trigger: GTTACACACAGGAGGTACACAAAATCCACCTACTCAACCTTTATGCAAGGAAGGAGGAGTGGAATAAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
3UTR TCA 72 bp CATGAGTGCAACTATCCTGCCATCTCCAAAAGAGATTaGTTTATTCCAATCTTCCCCAACCTCTTGCTCTAT +
Preference number: 3 (lower is better)
Translates to: HECNYPAISKRD*FIPIFPNLLLY
Trigger: ATAGAGCAAGAGGTTGGGGAAGATTGGAATAAATCAATCTCTTTTGGAGATGGCAGGATAGTTGCACTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
3UTR CCA 72 bp GAATTGTCAACTTATAAGTATAAGGCACAAAGCGACTaGAGAGAACTGACTACCCTTTGTCTAGAAGGCATC +
Preference number: 3 (lower is better)
Translates to: ELSTYKYKAQSD*RELTTLCLEGI
Trigger: GATGCCTTCTAGACAAAGGGTAGTCAGTTCTCTCCAGTCGCTTTGTGCCTTATACTTATAAGTTGACAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
3UTR-3UTR CAA 90 bp ACAAAGCGACTGGAGAGAACTGACTACCCTTTGTCTAGAAGGCATCAATTTTCACATCTCCAAAAGAGATaGATTTATTCCAATCTTCCC +
Preference number: 3 (lower is better)
Translates to: TKRLERTDYPLSRRHQFSHLQKR*IYSNLP
Trigger: GGGAAGATTGGAATAAATCAATCTCTTTTGGAGATG...TGAAAATTGATGCCTTCTAGACAAAGGGTAGTCAGTTCTCTCCAGTCGCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
3UTR-3UTR CAA 90 bp TTGAGCTTACCTTTCCCCCACTGCCTTATTGTTACATCTCTTGCTTATGACTTTCCATCTACGGGAGAATaGTCAACTTATAAGTATAAG +
Preference number: 3 (lower is better)
Translates to: LSLPFPHCLIVTSLAYDFPSTGE*STYKYK
Trigger: CTTATACTTATAAGTTGACAATTCTCCCGTAGATGG...AAAGTCATAAGCAAGAGATGTAACAATAAGGCAGTGGGGGAAAGGTAAGCTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
CDS-3UTR TCA 90 bp ACAAAGCGACTGGAGAGAACTGACTACCCTTTGTCTAGAAGGCATCAATTTTCACTGCACAAGCCAGCTTaGGGATGGGAGGTGCATCAC +
Preference number: 4 (lower is better)
Translates to: TKRLERTDYPLSRRHQFSLHKPA*GWEVHH
Trigger: GTGATGCACCTCCCATCCTCAAGCTGGCTTGTGCAG...TGAAAATTGATGCCTTCTAGACAAAGGGTAGTCAGTTCTCTCCAGTCGCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
CDS-3UTR TCA 90 bp ACAAAGCGACTGGAGAGAACTGACTACCCTTTGTCTAGAAGGCATCAATTTTCATCTGTGCCGGCCCTCTaGAGTACGAATCCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: TKRLERTDYPLSRRHQFSSVPAL*STNPQD
Trigger: ATCCTGAGGATTCGTACTTCAGAGGGCCGGCACAGA...TGAAAATTGATGCCTTCTAGACAAAGGGTAGTCAGTTCTCTCCAGTCGCTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
CDS-3UTR CCA 90 bp TTGAGCTTACCTTTCCCCCACTGCCTTATTGTTACATCTCTTGCTTATGACTTTTCCAGGGCTGGTGGATaGGGAATACCTGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LSLPFPHCLIVTSLAYDFSRAGG*GIPERK
Trigger: CTTCCTCTCAGGTATTCCCCATCCACCAGCCCTGGA...AAAGTCATAAGCAAGAGATGTAACAATAAGGCAGTGGGGGAAAGGTAAGCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
CDS-3UTR TCA 90 bp ACAAAGCGACTGGAGAGAACTGACTACCCTTTGTCTAGAAGGCATCAATTTTCATGGATGGGGAATACCTaGGAGGAAGAATGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: TKRLERTDYPLSRRHQFSWMGNT*EEECGH
Trigger: GTGACCACATTCTTCCTCTCAGGTATTCCCCATCCA...TGAAAATTGATGCCTTCTAGACAAAGGGTAGTCAGTTCTCTCCAGTCGCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
CDS-3UTR CCA 90 bp TTGAGCTTACCTTTCCCCCACTGCCTTATTGTTACATCTCTTGCTTATGACTTTAGGCTACAAAGAGCATaGTGTCCAGGGCTGGTGGAT +
Preference number: 4 (lower is better)
Translates to: LSLPFPHCLIVTSLAYDFRLQRA*CPGLVD
Trigger: ATCCACCAGCCCTGGACACCATGCTCTTTGTAGCCT...AAAGTCATAAGCAAGAGATGTAACAATAAGGCAGTGGGGGAAAGGTAAGCTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
CDS-3UTR CCA 90 bp TTGAGCTTACCTTTCCCCCACTGCCTTATTGTTACATCTCTTGCTTATGACTTTGATAGCCCCTCCCCTTaGGGAAACCAACGTCATCAA +
Preference number: 4 (lower is better)
Translates to: LSLPFPHCLIVTSLAYDFDSPSP*GNQRHQ
Trigger: TTGATGACGTTGGTTTCCCCAAGGGGAGGGGCTATC...AAAGTCATAAGCAAGAGATGTAACAATAAGGCAGTGGGGGAAAGGTAAGCTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
CDS-3UTR TCA 90 bp ACAAAGCGACTGGAGAGAACTGACTACCCTTTGTCTAGAAGGCATCAATTTTCACGATGTTCACAAAGATaGCCATCTCATTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TKRLERTDYPLSRRHQFSRCSQR*PSHWLR
Trigger: CCTCAGCCAATGAGATGGTCATCTTTGTGAACATCG...TGAAAATTGATGCCTTCTAGACAAAGGGTAGTCAGTTCTCTCCAGTCGCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
CDS-3UTR TCA 90 bp ACAAAGCGACTGGAGAGAACTGACTACCCTTTGTCTAGAAGGCATCAATTTTCAAGTTGCCCAGCACAGTaGGAATGTAAATCACCAAGA +
Preference number: 4 (lower is better)
Translates to: TKRLERTDYPLSRRHQFSSCPAQ*ECKSPR
Trigger: TCTTGGTGATTTACATTCTCACTGTGCTGGGCAACT...TGAAAATTGATGCCTTCTAGACAAAGGGTAGTCAGTTCTCTCCAGTCGCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
CDS-3UTR CCA 90 bp ACAAAGCGACTGGAGAGAACTGACTACCCTTTGTCTAGAAGGCATCAATTTTCATACGAATCCTCAGGATaGAGCAGACAATGGACACAT +
Preference number: 4 (lower is better)
Translates to: TKRLERTDYPLSRRHQFSYESSG*SRQWTH
Trigger: ATGTGTCCATTGTCTGCTCCATCCTGAGGATTCGTA...TGAAAATTGATGCCTTCTAGACAAAGGGTAGTCAGTTCTCTCCAGTCGCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
3UTR CAA 72 bp GAGTCTAACACAATCCCACATCCATCTACGGGAGAATaGTCAACTTATAAGTATAAGGCACAAAGCGACTGG +
Preference number: 4 (lower is better)
Translates to: ESNTIPHPSTGE*STYKYKAQSDW
Trigger: CCAGTCGCTTTGTGCCTTATACTTATAAGTTGACAATTCTCCCGTAGATGGATGTGGGATTGTGTTAGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
CDS-3UTR CCA 90 bp TTGAGCTTACCTTTCCCCCACTGCCTTATTGTTACATCTCTTGCTTATGACTTTCTGAGAGGAAGAATGTaGTCACTAGAGTCACATTTG +
Preference number: 4 (lower is better)
Translates to: LSLPFPHCLIVTSLAYDFLRGRM*SLESHL
Trigger: CAAATGTGACTCTAGTGACCACATTCTTCCTCTCAG...AAAGTCATAAGCAAGAGATGTAACAATAAGGCAGTGGGGGAAAGGTAAGCTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
CDS-3UTR GCA 90 bp ACAAAGCGACTGGAGAGAACTGACTACCCTTTGTCTAGAAGGCATCAATTTTCACTGGCTCTGAGAATATaGTACTTTGTCTTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: TKRLERTDYPLSRRHQFSLALRI*YFVFEF
Trigger: AAACTCAAAGACAAAGTAGCATATTCTCAGAGCCAG...TGAAAATTGATGCCTTCTAGACAAAGGGTAGTCAGTTCTCTCCAGTCGCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
CDS-3UTR CAA 90 bp ACAAAGCGACTGGAGAGAACTGACTACCCTTTGTCTAGAAGGCATCAATTTTCATCTGCACAAGCCAGCTaGAGGATGGGAGGTGCATCA +
Preference number: 5 (lower is better)
Translates to: TKRLERTDYPLSRRHQFSSAQAS*RMGGAS
Trigger: TGATGCACCTCCCATCCTCAAGCTGGCTTGTGCAGA...TGAAAATTGATGCCTTCTAGACAAAGGGTAGTCAGTTCTCTCCAGTCGCTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
CDS-3UTR CAA 90 bp TTGAGCTTACCTTTCCCCCACTGCCTTATTGTTACATCTCTTGCTTATGACTTTAACGTCATCAACATTTaGGGTACTGTGACTGTGGAG +
Preference number: 5 (lower is better)
Translates to: LSLPFPHCLIVTSLAYDFNVINI*GTVTVE
Trigger: CTCCACAGTCACAGTACCCAAAATGTTGATGACGTT...AAAGTCATAAGCAAGAGATGTAACAATAAGGCAGTGGGGGAAAGGTAAGCTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215523.2
CDS CCA 72 bp AAGGCTACAAAGAGCATGGTGTCCAGGGCTGGTGGATaGGGAATACCTGAGAGGAAGAATGTGGTCACTAGA +
Preference number: 6 (lower is better)
Translates to: KATKSMVSRAGG*GIPERKNVVTR
Trigger: TCTAGTGACCACATTCTTCCTCTCAGGTATTCCCCATCCACCAGCCCTGGACACCATGCTCTTTGTAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080835.4
ENSMUST00000215523.2