Pregenerated sensors for OLFR97 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058802Ensembl transcript IDs: ENSMUST00000073667.6, ENSMUST00000207414.3, ENSMUST00000213328.2, ENSMUST00000214622.2, ENSMUST00000214848.2, ENSMUST00000216225.2
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACAGATGGTTCCACCTACATTCAAAGTGCATCTTTCCTCCTCAGTaGAATCTCTCCAGAGATACCTTCCCAGATATGCCCAAAGGTGTA | + |
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Preference number: 1 (lower is better) Translates to: NRWFHLHSKCIFPPQ*NLSRDTFPDMPKGV Trigger: TACACCTTTGGGCATATCTGGGAAGGTATCTCTGGAGAGATTTCACTGAGGAGGAAAGATGCACTTTGAATGTAGGTGGAACCATCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| 3UTR CAA 90 bp | AAATCTCTCCAGAGATACCTTCCCAGATATGCCCAAAGGTGTACGTaGAAGGTGATTCCAAATGGAGTCCAGTTAACAGTGAAGATTATC | + |
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Preference number: 2 (lower is better) Translates to: KSLQRYLPRYAQRCT*KVIPNGVQLTVKII Trigger: GATAATCTTCACTGTTAACTGGACTCCATTTGGAATCACCTTCAACGTACACCTTTGGGCATATCTGGGAAGGTATCTCTGGAGAGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCAAAGTGCATCTTTCCTCCTCAGTGAAATCTCTCCAGAGATACCTTCCCAGGAAGGTGATTCCAAATaGAGTCCAGTTAACAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: IQSASFLLSEISPEIPSQEGDSK*SPVNSE Trigger: TTCACTGTTAACTGGACTCCATTTGGAATCACCTTC...CTGGGAAGGTATCTCTGGAGAGATTTCACTGAGGAGGAAAGATGCACTTTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCACATTGCATGTGTGGTCAACAAGCAAAAAGGGATGAATAATGATAGTAAGGAAGGTGATTCCAAATaGAGTCCAGTTAACAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: GHIACVVNKQKGMNNDSKEGDSK*SPVNSE Trigger: TTCACTGTTAACTGGACTCCATTTGGAATCACCTTC...CTTACTATCATTATTCATCCCTTTTTGCTTGTTGACCACACATGCAATGTGACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCACATTGCATGTGTGGTCAACAAGCAAAAAGGGATGAATAATGATAGTAAGACTAGGATGATTCATTaGAACAGATGGTTCCACCTA | + |
|
Preference number: 2 (lower is better) Translates to: GHIACVVNKQKGMNNDSKTRMIH*NRWFHL Trigger: TAGGTGGAACCATCTGTTCCAATGAATCATCCTAGT...CTTACTATCATTATTCATCCCTTTTTGCTTGTTGACCACACATGCAATGTGACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| 3UTR TCA 72 bp | TTCCACCTACATTCAAAGTGCATCTTTCCTCCTCAGTaGAATCTCTCCAGAGATACCTTCCCAGATATGCCC | + |
|
Preference number: 3 (lower is better) Translates to: FHLHSKCIFPPQ*NLSRDTFPDMP Trigger: GGGCATATCTGGGAAGGTATCTCTGGAGAGATTTCACTGAGGAGGAAAGATGCACTTTGAATGTAGGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| 3UTR GCA 72 bp | CTCAGTGAAATCTCTCCAGAGATACCTTCCCAGATATaGCCAAAGGTGTACGTTGAAGGTGATTCCAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: LSEISPEIPSQI*PKVYVEGDSKW Trigger: CCATTTGGAATCACCTTCAACGTACACCTTTGGGCATATCTGGGAAGGTATCTCTGGAGAGATTTCACTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| 3UTR-3UTR CAA 90 bp | TGTTGCTGTGGCAAAACACCCGACAAGCAATGTAGAAATGAAAGTTTCATTTTAGGGTCACAGGTCACATaGCATGTGTGGTCAACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: CCCGKTPDKQCRNESFILGSQVT*HVWSTS Trigger: GCTTGTTGACCACACATGCAATGTGACCTGTGACCC...TAAAATGAAACTTTCATTTCTACATTGCTTGTCGGGTGTTTTGCCACAGCAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 |
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| 3UTR CCA 72 bp | TCTCTTTATCAGACTAGGATGATTCATTGGAACAGATaGTTCCACCTACATTCAAAGTGCATCTTTCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SLYQTRMIHWNR*FHLHSKCIFPP Trigger: AGGAGGAAAGATGCACTTTGAATGTAGGTGGAACCATCTGTTCCAATGAATCATCCTAGTCTGATAAAGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | CCTTCCCAGATATGCCCAAAGGTGTACGTTGAAGGTGATTCCAAATGGAGTCCAACAGTCCCAACAGGATaGAGCCAGGAGCCTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSQICPKVYVEGDSKWSPTVPTG*SQEPDC Trigger: GCAGTCAGGCTCCTGGCTTCATCCTGTTGGGACTGT...TGGACTCCATTTGGAATCACCTTCAACGTACACCTTTGGGCATATCTGGGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | CTCAGTGAAATCTCTCCAGAGATACCTTCCCAGATATGCCCAAAGGTGTACGTTACAGTCCCAACAGGATaGAGCCAGGAGCCTGACTGC | + |
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Preference number: 4 (lower is better) Translates to: LSEISPEIPSQICPKVYVTVPTG*SQEPDC Trigger: GCAGTCAGGCTCCTGGCTTCATCCTGTTGGGACTGT...AACGTACACCTTTGGGCATATCTGGGAAGGTATCTCTGGAGAGATTTCACTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | ATCTCTCCAGAGATACCTTCCCAGATATGCCCAAAGGTGTACGTTGAAGGTGATACAGTCCCAACAGGATaGAGCCAGGAGCCTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISPEIPSQICPKVYVEGDTVPTG*SQEPDC Trigger: GCAGTCAGGCTCCTGGCTTCATCCTGTTGGGACTGT...ATCACCTTCAACGTACACCTTTGGGCATATCTGGGAAGGTATCTCTGGAGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | CCTTCCCAGATATGCCCAAAGGTGTACGTTGAAGGTGATTCCAAATGGAGTCCACTCCCCACGACCCACTaGCCAGAACTCTACATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: PSQICPKVYVEGDSKWSPLPTTH*PELYIY Trigger: GTAGATGTAGAGTTCTGGTCAGTGGGTCGTGGGGAG...TGGACTCCATTTGGAATCACCTTCAACGTACACCTTTGGGCATATCTGGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | CTTCCCAGATATGCCCAAAGGTGTACGTTGAAGGTGATTCCAAATGGAGTCCAGCTCCCCACGACCCACTaGCCAGAACTCTACATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LPRYAQRCTLKVIPNGVQLPTTH*PELYIY Trigger: GTAGATGTAGAGTTCTGGTCAGTGGGTCGTGGGGAG...CTGGACTCCATTTGGAATCACCTTCAACGTACACCTTTGGGCATATCTGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | CCTTCCCAGATATGCCCAAAGGTGTACGTTGAAGGTGATTCCAAATGGAGTCCAGTCAGAGACACACAATaGGCTACTCCCCACGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSQICPKVYVEGDSKWSPVRDTQ*ATPHDP Trigger: TGGGTCGTGGGGAGTAGCTCATTGTGTGTCTCTGAC...TGGACTCCATTTGGAATCACCTTCAACGTACACCTTTGGGCATATCTGGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | CTCAGTGAAATCTCTCCAGAGATACCTTCCCAGATATGCCCAAAGGTGTACGTTCTCCCCACGACCCACTaGCCAGAACTCTACATCTAC | + |
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Preference number: 4 (lower is better) Translates to: LSEISPEIPSQICPKVYVLPTTH*PELYIY Trigger: GTAGATGTAGAGTTCTGGTCAGTGGGTCGTGGGGAG...AACGTACACCTTTGGGCATATCTGGGAAGGTATCTCTGGAGAGATTTCACTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | CCCAGATATGCCCAAAGGTGTACGTTGAAGGTGATTCCAAATGGAGTCCAGTTACTCCCCACGACCCACTaGCCAGAACTCTACATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: PRYAQRCTLKVIPNGVQLLPTTH*PELYIY Trigger: GTAGATGTAGAGTTCTGGTCAGTGGGTCGTGGGGAG...TAACTGGACTCCATTTGGAATCACCTTCAACGTACACCTTTGGGCATATCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | CCCAGATATGCCCAAAGGTGTACGTTGAAGGTGATTCCAAATGGAGTCCAGTTAGTCAGAGACACACAATaGGCTACTCCCCACGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: PRYAQRCTLKVIPNGVQLVRDTQ*ATPHDP Trigger: TGGGTCGTGGGGAGTAGCTCATTGTGTGTCTCTGAC...TAACTGGACTCCATTTGGAATCACCTTCAACGTACACCTTTGGGCATATCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | CTTCCCAGATATGCCCAAAGGTGTACGTTGAAGGTGATTCCAAATGGAGTCCAGCCTTTTTCCCTGTGCTaGTGGAACCTTAGCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: LPRYAQRCTLKVIPNGVQPFSLC*WNLSHS Trigger: GCTGTGGCTAAGGTTCCATCAGCACAGGGAAAAAGG...CTGGACTCCATTTGGAATCACCTTCAACGTACACCTTTGGGCATATCTGGGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | ACAGATGGTTCCACCTACATTCAAAGTGCATCTTTCCTCCTCAGTGAAATCTCTACAGTCCCAACAGGATaGAGCCAGGAGCCTGACTGC | + |
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Preference number: 4 (lower is better) Translates to: TDGSTYIQSASFLLSEISTVPTG*SQEPDC Trigger: GCAGTCAGGCTCCTGGCTTCATCCTGTTGGGACTGT...AGAGATTTCACTGAGGAGGAAAGATGCACTTTGAATGTAGGTGGAACCATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | ATTCAAAGTGCATCTTTCCTCCTCAGTGAAATCTCTCCAGAGATACCTTCCCAGCTCCCCACGACCCACTaGCCAGAACTCTACATCTAC | + |
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Preference number: 4 (lower is better) Translates to: IQSASFLLSEISPEIPSQLPTTH*PELYIY Trigger: GTAGATGTAGAGTTCTGGTCAGTGGGTCGTGGGGAG...CTGGGAAGGTATCTCTGGAGAGATTTCACTGAGGAGGAAAGATGCACTTTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | CTTCCCAGATATGCCCAAAGGTGTACGTTGAAGGTGATTCCAAATGGAGTCCAGAGACTCTCATTGAGGTaGGCATCAGAGCAGGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LPRYAQRCTLKVIPNGVQRLSLR*ASEQES Trigger: GCTTTCCTGCTCTGATGCTCACCTCAATGAGAGTCT...CTGGACTCCATTTGGAATCACCTTCAACGTACACCTTTGGGCATATCTGGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | CTCAGTGAAATCTCTCCAGAGATACCTTCCCAGATATGCCCAAAGGTGTACGTTCCTTTTTCCCTGTGCTaGTGGAACCTTAGCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: LSEISPEIPSQICPKVYVPFSLC*WNLSHS Trigger: GCTGTGGCTAAGGTTCCATCAGCACAGGGAAAAAGG...AACGTACACCTTTGGGCATATCTGGGAAGGTATCTCTGGAGAGATTTCACTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR CCA 90 bp | CCTTCCCAGATATGCCCAAAGGTGTACGTTGAAGGTGATTCCAAATGGAGTCCAAGGACTACAGAGAGGTaGGAACTGCATGTAGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: PSQICPKVYVEGDSKWSPRTTER*ELHVAK Trigger: CTTGGCTACATGCAGTTCCCACCTCTCTGTAGTCCT...TGGACTCCATTTGGAATCACCTTCAACGTACACCTTTGGGCATATCTGGGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR CCA 90 bp | CTTCCCAGATATGCCCAAAGGTGTACGTTGAAGGTGATTCCAAATGGAGTCCAGAGGACTACAGAGAGGTaGGAACTGCATGTAGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: LPRYAQRCTLKVIPNGVQRTTER*ELHVAK Trigger: CTTGGCTACATGCAGTTCCCACCTCTCTGTAGTCCT...CTGGACTCCATTTGGAATCACCTTCAACGTACACCTTTGGGCATATCTGGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | AGATATGCCCAAAGGTGTACGTTGAAGGTGATTCCAAATGGAGTCCAGTTAACAGTCAGAGACACACAATaGGCTACTCCCCACGACCCA | + |
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Preference number: 4 (lower is better) Translates to: RYAQRCTLKVIPNGVQLTVRDTQ*ATPHDP Trigger: TGGGTCGTGGGGAGTAGCTCATTGTGTGTCTCTGAC...TGTTAACTGGACTCCATTTGGAATCACCTTCAACGTACACCTTTGGGCATATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | CTCAGTGAAATCTCTCCAGAGATACCTTCCCAGATATGCCCAAAGGTGTACGTTAGACTCTCATTGAGGTaGGCATCAGAGCAGGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LSEISPEIPSQICPKVYVRLSLR*ASEQES Trigger: GCTTTCCTGCTCTGATGCTCACCTCAATGAGAGTCT...AACGTACACCTTTGGGCATATCTGGGAAGGTATCTCTGGAGAGATTTCACTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR CCA 90 bp | ATCTCTCCAGAGATACCTTCCCAGATATGCCCAAAGGTGTACGTTGAAGGTGATAGGACTACAGAGAGGTaGGAACTGCATGTAGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: ISPEIPSQICPKVYVEGDRTTER*ELHVAK Trigger: CTTGGCTACATGCAGTTCCCACCTCTCTGTAGTCCT...ATCACCTTCAACGTACACCTTTGGGCATATCTGGGAAGGTATCTCTGGAGAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | ATTCAAAGTGCATCTTTCCTCCTCAGTGAAATCTCTCCAGAGATACCTTCCCAGAGACTCTCATTGAGGTaGGCATCAGAGCAGGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: IQSASFLLSEISPEIPSQRLSLR*ASEQES Trigger: GCTTTCCTGCTCTGATGCTCACCTCAATGAGAGTCT...CTGGGAAGGTATCTCTGGAGAGATTTCACTGAGGAGGAAAGATGCACTTTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | TCCACCTACATTCAAAGTGCATCTTTCCTCCTCAGTGAAATCTCTCCAGAGATACCTTTTTCCCTGTGCTaGTGGAACCTTAGCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: STYIQSASFLLSEISPEIPFSLC*WNLSHS Trigger: GCTGTGGCTAAGGTTCCATCAGCACAGGGAAAAAGG...TATCTCTGGAGAGATTTCACTGAGGAGGAAAGATGCACTTTGAATGTAGGTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | ATTCAAAGTGCATCTTTCCTCCTCAGTGAAATCTCTCCAGAGATACCTTCCCAGGCAAAGAAGTACAACTaGGTCAGGCATCCAGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: IQSASFLLSEISPEIPSQAKKYN*VRHPEN Trigger: GTTCTCTGGATGCCTGACTCAGTTGTACTTCTTTGC...CTGGGAAGGTATCTCTGGAGAGATTTCACTGAGGAGGAAAGATGCACTTTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | GGTCACATTGCATGTGTGGTCAACAAGCAAAAAGGGATGAATAATGATAGTAAGGTCAGAGACACACAATaGGCTACTCCCCACGACCCA | + |
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Preference number: 4 (lower is better) Translates to: GHIACVVNKQKGMNNDSKVRDTQ*ATPHDP Trigger: TGGGTCGTGGGGAGTAGCTCATTGTGTGTCTCTGAC...CTTACTATCATTATTCATCCCTTTTTGCTTGTTGACCACACATGCAATGTGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | CCTACATTCAAAGTGCATCTTTCCTCCTCAGTGAAATCTCTCCAGAGATACCTTAGACTCTCATTGAGGTaGGCATCAGAGCAGGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: PTFKVHLSSSVKSLQRYLRLSLR*ASEQES Trigger: GCTTTCCTGCTCTGATGCTCACCTCAATGAGAGTCT...AAGGTATCTCTGGAGAGATTTCACTGAGGAGGAAAGATGCACTTTGAATGTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR CCA 90 bp | ATTCAAAGTGCATCTTTCCTCCTCAGTGAAATCTCTCCAGAGATACCTTCCCAGATCCAGAGAACGAGATaGATCCATCTCCAGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: IQSASFLLSEISPEIPSQIQRTR*IHLQST Trigger: TGTGGACTGGAGATGGATCCATCTCGTTCTCTGGAT...CTGGGAAGGTATCTCTGGAGAGATTTCACTGAGGAGGAAAGATGCACTTTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR CCA 90 bp | GATGGTTCCACCTACATTCAAAGTGCATCTTTCCTCCTCAGTGAAATCTCTCCAATCCAGAGAACGAGATaGATCCATCTCCAGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: DGSTYIQSASFLLSEISPIQRTR*IHLQST Trigger: TGTGGACTGGAGATGGATCCATCTCGTTCTCTGGAT...TGGAGAGATTTCACTGAGGAGGAAAGATGCACTTTGAATGTAGGTGGAACCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR CCA 90 bp | AGATATGCCCAAAGGTGTACGTTGAAGGTGATTCCAAATGGAGTCCAGTTAACAAGGACTACAGAGAGGTaGGAACTGCATGTAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RYAQRCTLKVIPNGVQLTRTTER*ELHVAK Trigger: CTTGGCTACATGCAGTTCCCACCTCTCTGTAGTCCT...TGTTAACTGGACTCCATTTGGAATCACCTTCAACGTACACCTTTGGGCATATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR CCA 90 bp | CCTACATTCAAAGTGCATCTTTCCTCCTCAGTGAAATCTCTCCAGAGATACCTTAGGACTACAGAGAGGTaGGAACTGCATGTAGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: PTFKVHLSSSVKSLQRYLRTTER*ELHVAK Trigger: CTTGGCTACATGCAGTTCCCACCTCTCTGTAGTCCT...AAGGTATCTCTGGAGAGATTTCACTGAGGAGGAAAGATGCACTTTGAATGTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| 3UTR CAA 72 bp | CAGAGATACCTTCCCAGATATGCCCAAAGGTGTACGTaGAAGGTGATTCCAAATGGAGTCCAGTTAACAGTG | + |
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Preference number: 4 (lower is better) Translates to: QRYLPRYAQRCT*KVIPNGVQLTV Trigger: CACTGTTAACTGGACTCCATTTGGAATCACCTTCAACGTACACCTTTGGGCATATCTGGGAAGGTATCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR CCA 90 bp | TCCACCTACATTCAAAGTGCATCTTTCCTCCTCAGTGAAATCTCTCCAGAGATAATCCAGAGAACGAGATaGATCCATCTCCAGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: STYIQSASFLLSEISPEIIQRTR*IHLQST Trigger: TGTGGACTGGAGATGGATCCATCTCGTTCTCTGGAT...TATCTCTGGAGAGATTTCACTGAGGAGGAAAGATGCACTTTGAATGTAGGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR CCA 90 bp | CCTACATTCAAAGTGCATCTTTCCTCCTCAGTGAAATCTCTCCAGAGATACCTTATCCAGAGAACGAGATaGATCCATCTCCAGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: PTFKVHLSSSVKSLQRYLIQRTR*IHLQST Trigger: TGTGGACTGGAGATGGATCCATCTCGTTCTCTGGAT...AAGGTATCTCTGGAGAGATTTCACTGAGGAGGAAAGATGCACTTTGAATGTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS-3UTR TCA 90 bp | TGTTGCTGTGGCAAAACACCCGACAAGCAATGTAGAAATGAAAGTTTCATTTTACCTTTTTCCCTGTGCTaGTGGAACCTTAGCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: CCCGKTPDKQCRNESFILPFSLC*WNLSHS Trigger: GCTGTGGCTAAGGTTCCATCAGCACAGGGAAAAAGG...TAAAATGAAACTTTCATTTCTACATTGCTTGTCGGGTGTTTTGCCACAGCAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 |
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| CDS-3UTR CCA 90 bp | TGTTGCTGTGGCAAAACACCCGACAAGCAATGTAGAAATGAAAGTTTCATTTTAATCCAGAGAACGAGATaGATCCATCTCCAGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: CCCGKTPDKQCRNESFILIQRTR*IHLQST Trigger: TGTGGACTGGAGATGGATCCATCTCGTTCTCTGGAT...TAAAATGAAACTTTCATTTCTACATTGCTTGTCGGGTGTTTTGCCACAGCAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073667.6 ENSMUST00000213328.2 ENSMUST00000214622.2 |
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| CDS TCA 90 bp | ATTCCCAAAACTCCAGCCAAAGCCATCATTAGACTCTCATTGAGGTaGGCATCAGAGCAGGAAAGCAATAAGAGAGGCCCAAAGTCACAG | + |
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Preference number: 5 (lower is better) Translates to: IPKTPAKAIIRLSLR*ASEQESNKRGPKSQ Trigger: CTGTGACTTTGGGCCTCTCTTATTGCTTTCCTGCTCTGATGCTCACCTCAATGAGAGTCTAATGATGGCTTTGGCTGGAGTTTTGGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073667.6 ENSMUST00000207414.3 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS TCA 72 bp | AACAAGGAAGATGCTAAAGAGGGGTTGCCATTTCTCTaGGTTACTGGACAGTCCCAACAGGATGAAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: NKEDAKEGLPFL*VTGQSQQDEAR Trigger: CCTGGCTTCATCCTGTTGGGACTGTCCAGTAACTCAGAGAAATGGCAACCCCTCTTTAGCATCTTCCTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073667.6 ENSMUST00000207414.3 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS TCA 72 bp | ACTCCAGCCAAAGCCATCATTAGACTCTCATTGAGGTaGGCATCAGAGCAGGAAAGCAATAAGAGAGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: TPAKAIIRLSLR*ASEQESNKRGP Trigger: TGGGCCTCTCTTATTGCTTTCCTGCTCTGATGCTCACCTCAATGAGAGTCTAATGATGGCTTTGGCTGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000073667.6 ENSMUST00000207414.3 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS CCA 72 bp | AGAAGTACAACTGAGTCAGGCATCCAGAGAACGAGATaGATCCATCTCCAGTCCACAGAGTCTCCAGCATTT | + |
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Preference number: 6 (lower is better) Translates to: RSTTESGIQRTR*IHLQSTESPAF Trigger: AAATGCTGGAGACTCTGTGGACTGGAGATGGATCCATCTCGTTCTCTGGATGCCTGACTCAGTTGTACTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000073667.6 ENSMUST00000207414.3 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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| CDS TCA 72 bp | CCAAAACTCCAGCCAAAGCCATCATTAGACTCTCATTaGGGTGAGCATCAGAGCAGGAAAGCAATAAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: PKLQPKPSLDSH*GEHQSRKAIRE Trigger: CTCTCTTATTGCTTTCCTGCTCTGATGCTCACCTCAATGAGAGTCTAATGATGGCTTTGGCTGGAGTTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073667.6 ENSMUST00000207414.3 ENSMUST00000213328.2 ENSMUST00000214622.2 ENSMUST00000214848.2 ENSMUST00000216225.2 |
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