Pregenerated sensors for OLFR959 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059366Ensembl transcript IDs: ENSMUST00000079178.3, ENSMUST00000215194.2, ENSMUST00000216298.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGTATGTGTGCCTGAGTACAGGTTCACTTAGCGGCCAGAGTCACTaGATCTTCCTGGAGCTGGAAGTACAGGAGGCTAGAATCCACCTG | + |
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Preference number: 1 (lower is better) Translates to: GYVCLSTGSLSGQSH*IFLELEVQEARIHL Trigger: CAGGTGGATTCTAGCCTCCTGTACTTCCAGCTCCAGGAAGATGCAGTGACTCTGGCCGCTAAGTGAACCTGTACTCAGGCACACATACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR GCA 90 bp | CCCACTAGCTTTTCTCTCTTCTCGTTCATAAGCCAAATGTTCATATaGAATACCAGCATCCAGCCTCAACCCAATCAGCATCATTTGCTC | + |
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Preference number: 1 (lower is better) Translates to: PTSFSLFSFISQMFI*NTSIQPQPNQHHLL Trigger: GAGCAAATGATGCTGATTGGGTTGAGGCTGGATGCTGGTATTGCATATGAACATTTGGCTTATGAACGAGAAGAGAGAAAAGCTAGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR TCA 90 bp | AAAATAACAGAGAGAATCTCAAGAGTATTGGCTGGGGTAAAGGTTTaGTACCTTTCAGCAACCCTACAGTTCATTCCAGTGGCTGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: KITERISRVLAGVKV*YLSATLQFIPVAEE Trigger: TTCCTCAGCCACTGGAATGAACTGTAGGGTTGCTGAAAGGTATCAAACCTTTACCCCAGCCAATACTCTTGAGATTCTCTCTGTTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR TCA 90 bp | ATGCAACATGCAAGTAAACAAAGTGTTCAGTCAACTTCCTTTAAGTaGAATTACTTCCTATTCCTTCCCCAACAGAGGGTAGTGCAGGGG | + |
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Preference number: 1 (lower is better) Translates to: MQHASKQSVQSTSFK*NYFLFLPQQRVVQG Trigger: CCCCTGCACTACCCTCTGTTGGGGAAGGAATAGGAAGTAATTTCACTTAAAGGAAGTTGACTGAACACTTTGTTTACTTGCATGTTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR TCA 90 bp | AAAGGTTTGATACCTTTCAGCAACCCTACAGTTCATTCCAGTGGCTaGGGAAAGAGAGGTCAAAAGATTTCCTTGAATACACTCATTTAT | + |
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Preference number: 1 (lower is better) Translates to: KGLIPFSNPTVHSSG*GKRGQKISLNTLIY Trigger: ATAAATGAGTGTATTCAAGGAAATCTTTTGACCTCTCTTTCCTCAGCCACTGGAATGAACTGTAGGGTTGCTGAAAGGTATCAAACCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR GCA 90 bp | TACTTCCTATTCCTTCCCCAACAGAGGGTAGTGCAGGGGGTGGACATTTCTTTTACAGAATGCATAGGGTaGTCTGCTTACCCGGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: YFLFLPQQRVVQGVDISFTECIG*SAYPAE Trigger: CTCTGCCGGGTAAGCAGAGCACCCTATGCATTCTGT...AAAAGAAATGTCCACCCCCTGCACTACCCTCTGTTGGGGAAGGAATAGGAAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR CCA 90 bp | TACTTCCTATTCCTTCCCCAACAGAGGGTAGTGCAGGGGGTGGACATTTCTTTTAACAAGGAACATTGGTaGGGAGAGGGAAATAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: YFLFLPQQRVVQGVDISFNKEHW*GEGNRR Trigger: CCTCCTATTTCCCTCTCCCCACCAATGTTCCTTGTT...AAAAGAAATGTCCACCCCCTGCACTACCCTCTGTTGGGGAAGGAATAGGAAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR CCA 90 bp | TACTTCCTATTCCTTCCCCAACAGAGGGTAGTGCAGGGGGTGGACATTTCTTTTCCAAACAAGGAACATTaGTGGGGAGAGGGAAATAGG | + |
|
Preference number: 2 (lower is better) Translates to: YFLFLPQQRVVQGVDISFPNKEH*WGEGNR Trigger: CCTATTTCCCTCTCCCCACCAATGTTCCTTGTTTGG...AAAAGAAATGTCCACCCCCTGCACTACCCTCTGTTGGGGAAGGAATAGGAAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR TCA 90 bp | TACTTCCTATTCCTTCCCCAACAGAGGGTAGTGCAGGGGGTGGACATTTCTTTTGTAGATATTGGAAACTaGATGGATCCTGAGCGAGTC | + |
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Preference number: 2 (lower is better) Translates to: YFLFLPQQRVVQGVDISFVDIGN*MDPERV Trigger: GACTCGCTCAGGATCCATTCAGTTTCCAATATCTAC...AAAAGAAATGTCCACCCCCTGCACTACCCTCTGTTGGGGAAGGAATAGGAAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGCAGCTAAGTTTAAGAGGGATTGGGTTGCTTAAGGAGACAGTCATTTTTGTCACTGCATCTTCCTaGAGCTGGAAGTACAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: SEQLSLRGIGLLKETVIFVTASS*SWKYRR Trigger: CCTCCTGTACTTCCAGCTCCAGGAAGATGCAGTGAC...AAAAATGACTGTCTCCTTAAGCAACCCAATCCCTCTTAAACTTAGCTGCTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR TCA 90 bp | TACTTCCTATTCCTTCCCCAACAGAGGGTAGTGCAGGGGGTGGACATTTCTTTTTTTAAATCATGTGTGTaGATGTGTGTCTATGCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: YFLFLPQQRVVQGVDISFFKSCV*MCVYAR Trigger: CCTGGCATAGACACACATTCACACACATGATTTAAA...AAAAGAAATGTCCACCCCCTGCACTACCCTCTGTTGGGGAAGGAATAGGAAGTA 44% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGAGCAGCTAAGTTTAAGAGGGATTGGGTTGCTTAAGGAGACAGTCATTTTTGTTCATTCCAGTGGCTaGGGAAAGAGAGGTCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: SEQLSLRGIGLLKETVIFVHSSG*GKRGQK Trigger: CTTTTGACCTCTCTTTCCTCAGCCACTGGAATGAAC...AAAAATGACTGTCTCCTTAAGCAACCCAATCCCTCTTAAACTTAGCTGCTCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR CCA 90 bp | AACAATCTAGTCTCATCTCCAAAAGTCCCACTAGCTTTTCTCTCTTCTCGTTCAAACAAGGAACATTGGTaGGGAGAGGGAAATAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: NNLVSSPKVPLAFLSSRSNKEHW*GEGNRR Trigger: CCTCCTATTTCCCTCTCCCCACCAATGTTCCTTGTT...TGAACGAGAAGAGAGAAAAGCTAGTGGGACTTTTGGAGATGAGACTAGATTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR CCA 90 bp | AAGATATACCAACTTAAGGAATTAACTCTCATGGACACTCCAAAGGAACGTGTTGTCACTGCATCTTCCTaGAGCTGGAAGTACAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: KIYQLKELTLMDTPKERVVTASS*SWKYRR Trigger: CCTCCTGTACTTCCAGCTCCAGGAAGATGCAGTGAC...AACACGTTCCTTTGGAGTGTCCATGAGAGTTAATTCCTTAAGTTGGTATATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR CCA 90 bp | TACTTCCTATTCCTTCCCCAACAGAGGGTAGTGCAGGGGGTGGACATTTCTTTTTCACAGTATTACTCTTaGATTCATGTTAGTTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: YFLFLPQQRVVQGVDISFSQYYS*IHVSCR Trigger: CCTGCAACTAACATGAATCCAAGAGTAATACTGTGA...AAAAGAAATGTCCACCCCCTGCACTACCCTCTGTTGGGGAAGGAATAGGAAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR TCA 90 bp | TATATTGTTTTGAAAGATCTTTCTAGAGTGGCCTGTTTACATGAAGAGGCAGCTGCATGCTGGTACCTCTaGTTTGGCCAAACCCACATT | + |
|
Preference number: 2 (lower is better) Translates to: YIVLKDLSRVACLHEEAAACWYL*FGQTHI Trigger: AATGTGGGTTTGGCCAAATCAGAGGTACCAGCATGC...AGCTGCCTCTTCATGTAAACAGGCCACTCTAGAAAGATCTTTCAAAACAATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGAGCAGCTAAGTTTAAGAGGGATTGGGTTGCTTAAGGAGACAGTCATTTTTGTAGATATTGGAAACTaGATGGATCCTGAGCGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SEQLSLRGIGLLKETVIFVDIGN*MDPERV Trigger: GACTCGCTCAGGATCCATTCAGTTTCCAATATCTAC...AAAAATGACTGTCTCCTTAAGCAACCCAATCCCTCTTAAACTTAGCTGCTCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR GCA 90 bp | AAGATGGCTTCTCTAAAGCAGACATTTGAGGAAAATTTAACTGCATCCAAAATGACAGAATGCATAGGGTaGTCTGCTTACCCGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: KMASLKQTFEENLTASKMTECIG*SAYPAE Trigger: CTCTGCCGGGTAAGCAGAGCACCCTATGCATTCTGT...CATTTTGGATGCAGTTAAATTTTCCTCAAATGTCTGCTTTAGAGAAGCCATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR GCA 90 bp | TATATTGTTTTGAAAGATCTTTCTAGAGTGGCCTGTTTACATGAAGAGGCAGCTATGCCAGGGTATGTGTaGCTGAGTACAGGTTCACTT | + |
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Preference number: 2 (lower is better) Translates to: YIVLKDLSRVACLHEEAAMPGYV*LSTGSL Trigger: AAGTGAACCTGTACTCAGGCACACATACCCTGGCAT...AGCTGCCTCTTCATGTAAACAGGCCACTCTAGAAAGATCTTTCAAAACAATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR TCA 90 bp | TATATTGTTTTGAAAGATCTTTCTAGAGTGGCCTGTTTACATGAAGAGGCAGCTCCTCTGATGTACACATaGAGTGTTCATGACTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: YIVLKDLSRVACLHEEAAPLMYT*SVHDWS Trigger: TGACCAGTCATGAACACTTCATGTGTACATCAGAGG...AGCTGCCTCTTCATGTAAACAGGCCACTCTAGAAAGATCTTTCAAAACAATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR TCA 90 bp | TATATTGTTTTGAAAGATCTTTCTAGAGTGGCCTGTTTACATGAAGAGGCAGCTCCCACATTCAGGACCTaGCCAAAAGCTTTTCTCTAT | + |
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Preference number: 2 (lower is better) Translates to: YIVLKDLSRVACLHEEAAPTFRT*PKAFLY Trigger: ATAGAGAAAAGCTTTTGGTCAGGTCCTGAATGTGGG...AGCTGCCTCTTCATGTAAACAGGCCACTCTAGAAAGATCTTTCAAAACAATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR TCA 90 bp | AAGATATACCAACTTAAGGAATTAACTCTCATGGACACTCCAAAGGAACGTGTTCCCACATTCAGGACCTaGCCAAAAGCTTTTCTCTAT | + |
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Preference number: 2 (lower is better) Translates to: KIYQLKELTLMDTPKERVPTFRT*PKAFLY Trigger: ATAGAGAAAAGCTTTTGGTCAGGTCCTGAATGTGGG...AACACGTTCCTTTGGAGTGTCCATGAGAGTTAATTCCTTAAGTTGGTATATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR CCA 90 bp | AAGATGGCTTCTCTAAAGCAGACATTTGAGGAAAATTTAACTGCATCCAAAATGCCAAACAAGGAACATTaGTGGGGAGAGGGAAATAGG | + |
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Preference number: 2 (lower is better) Translates to: KMASLKQTFEENLTASKMPNKEH*WGEGNR Trigger: CCTATTTCCCTCTCCCCACCAATGTTCCTTGTTTGG...CATTTTGGATGCAGTTAAATTTTCCTCAAATGTCTGCTTTAGAGAAGCCATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR TCA 90 bp | AAGATGGCTTCTCTAAAGCAGACATTTGAGGAAAATTTAACTGCATCCAAAATGCCTCTGATGTACACATaGAGTGTTCATGACTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: KMASLKQTFEENLTASKMPLMYT*SVHDWS Trigger: TGACCAGTCATGAACACTTCATGTGTACATCAGAGG...CATTTTGGATGCAGTTAAATTTTCCTCAAATGTCTGCTTTAGAGAAGCCATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR GCA 90 bp | AAGATATACCAACTTAAGGAATTAACTCTCATGGACACTCCAAAGGAACGTGTTCTCCATGCTGCTTTCTaGCTTCTCTTCTATTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: KIYQLKELTLMDTPKERVLHAAF*LLFYCV Trigger: AACACAATAGAAGAGAAGGCAGAAAGCAGCATGGAG...AACACGTTCCTTTGGAGTGTCCATGAGAGTTAATTCCTTAAGTTGGTATATCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR CCA 90 bp | AACAATCTAGTCTCATCTCCAAAAGTCCCACTAGCTTTTCTCTCTTCTCGTTCACTACCACTTATTCCTTaGTCATTCTTTTCAAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: NNLVSSPKVPLAFLSSRSLPLIP*SFFSKS Trigger: AGACTTTGAAAAGAATGACCAAGGAATAAGTGGTAG...TGAACGAGAAGAGAGAAAAGCTAGTGGGACTTTTGGAGATGAGACTAGATTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR GCA 72 bp | TGCCTGAGTACAGGTTCACTTAGCGGCCAGAGTCACTaGATCTTCCTGGAGCTGGAAGTACAGGAGGCTAGA | + |
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Preference number: 3 (lower is better) Translates to: CLSTGSLSGQSH*IFLELEVQEAR Trigger: TCTAGCCTCCTGTACTTCCAGCTCCAGGAAGATGCAGTGACTCTGGCCGCTAAGTGAACCTGTACTCAGGCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR TCA 72 bp | AGCGAGTCCTATGCCAGGGCAATTTGCATTAACTGCTaGGCCATCTCACTAGCTCCTCCAGATTCCTTTTTA | + |
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Preference number: 3 (lower is better) Translates to: SESYARAICINC*AISLAPPDSFL Trigger: TAAAAAGGAATCTGGAGGAGCTAGTGAGATGGCTCAGCAGTTAATGCAAATTGCCCTGGCATAGGACTCGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR TCA 72 bp | TACATGAAGAGGCAGCTCAGATTCAACACGGAGACATaGGAGCTCCCAGCAAGTTTCAGAGCAGCTAAGTTT | + |
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Preference number: 3 (lower is better) Translates to: YMKRQLRFNTET*ELPASFRAAKF Trigger: AAACTTAGCTGCTCTGAAACTTGCTGGGAGCTCTCATGTCTCCGTGTTGAATCTGAGCTGCCTCTTCATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGAGCAGCTAAGTTTAAGAGGGATTGGGTTGCTTAAGGAGACAGTCATTTTTGCTGGTACCTCTGATTaGGCCAAACCCACATTCAGG | + |
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Preference number: 3 (lower is better) Translates to: SEQLSLRGIGLLKETVIFAGTSD*AKPTFR Trigger: CCTGAATGTGGGTTTGGCCAAATCAGAGGTACCAGC...AAAAATGACTGTCTCCTTAAGCAACCCAATCCCTCTTAAACTTAGCTGCTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR CAA 90 bp | TACTTCCTATTCCTTCCCCAACAGAGGGTAGTGCAGGGGGTGGACATTTCTTTTATAATAAGATGCCATTaGGAGCCACAGGAATGTAAC | + |
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Preference number: 3 (lower is better) Translates to: YFLFLPQQRVVQGVDISFIIRCH*EPQECN Trigger: GTTACATTCCTGTGGCTCCAAATGGCATCTTATTAT...AAAAGAAATGTCCACCCCCTGCACTACCCTCTGTTGGGGAAGGAATAGGAAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR TCA 72 bp | GAGAGAATCTCAAGAGTATTGGCTGGGGTAAAGGTTTaGTACCTTTCAGCAACCCTACAGTTCATTCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: ERISRVLAGVKV*YLSATLQFIPV Trigger: CACTGGAATGAACTGTAGGGTTGCTGAAAGGTATCAAACCTTTACCCCAGCCAATACTCTTGAGATTCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR GCA 72 bp | AAGCAACAACAACATCAAAAATATGGACAAACAGAATaGATAGGGTGCTCTGCTTACCCGGCAGAGCATCAC | + |
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Preference number: 3 (lower is better) Translates to: KQQQHQKYGQTE*IGCSAYPAEHH Trigger: GTGATGCTCTGCCGGGTAAGCAGAGCACCCTATGCATTCTGTTTGTCCATATTTTTGATGTTGTTGTTGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR CAA 90 bp | TACTTCCTATTCCTTCCCCAACAGAGGGTAGTGCAGGGGGTGGACATTTCTTTTTCTACCACTTATTCCTaGGTCATTCTTTTCAAAGTC | + |
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Preference number: 3 (lower is better) Translates to: YFLFLPQQRVVQGVDISFSTTYS*VILFKV Trigger: GACTTTGAAAAGAATGACCAAGGAATAAGTGGTAGA...AAAAGAAATGTCCACCCCCTGCACTACCCTCTGTTGGGGAAGGAATAGGAAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR GCA 72 bp | CAACATCAAAAATATGGACAAACAGAATGCATAGGGTaGTCTGCTTACCCGGCAGAGCATCACCTGTATAAT | + |
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Preference number: 3 (lower is better) Translates to: QHQKYGQTECIG*SAYPAEHHLYN Trigger: ATTATACAGGTGATGCTCTGCCGGGTAAGCAGAGCACCCTATGCATTCTGTTTGTCCATATTTTTGATGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR TCA 72 bp | ATACCTTTCAGCAACCCTACAGTTCATTCCAGTGGCTaGGGAAAGAGAGGTCAAAAGATTTCCTTGAATACA | + |
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Preference number: 3 (lower is better) Translates to: IPFSNPTVHSSG*GKRGQKISLNT Trigger: TGTATTCAAGGAAATCTTTTGACCTCTCTTTCCTCAGCCACTGGAATGAACTGTAGGGTTGCTGAAAGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR GCA 72 bp | TTTTCTCTCTTCTCGTTCATAAGCCAAATGTTCATATaGAATACCAGCATCCAGCCTCAACCCAATCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: FSLFSFISQMFI*NTSIQPQPNQH Trigger: ATGCTGATTGGGTTGAGGCTGGATGCTGGTATTGCATATGAACATTTGGCTTATGAACGAGAAGAGAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCTGAGGAAAGAGAGGTCAAAAGATTTCCTTGAATACACTCATTTATCAAGTAGCATAGATCCATCATaGCCCTTCATTGCACTGAGC | + |
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Preference number: 3 (lower is better) Translates to: WLRKERSKDFLEYTHLSSSIDPS*PFIALS Trigger: GCTCAGTGCAATGAAGGGCAATGATGGATCTATGCT...ACTTGATAAATGAGTGTATTCAAGGAAATCTTTTGACCTCTCTTTCCTCAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR CAA 90 bp | AACAATCTAGTCTCATCTCCAAAAGTCCCACTAGCTTTTCTCTCTTCTCGTTCAATAATAAGATGCCATTaGGAGCCACAGGAATGTAAC | + |
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Preference number: 3 (lower is better) Translates to: NNLVSSPKVPLAFLSSRSIIRCH*EPQECN Trigger: GTTACATTCCTGTGGCTCCAAATGGCATCTTATTAT...TGAACGAGAAGAGAGAAAAGCTAGTGGGACTTTTGGAGATGAGACTAGATTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR CAA 90 bp | AAGATATACCAACTTAAGGAATTAACTCTCATGGACACTCCAAAGGAACGTGTTGGGTGGACATTTCTTTaGCCTTCATTTTCTACCCAG | + |
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Preference number: 3 (lower is better) Translates to: KIYQLKELTLMDTPKERVGWTFL*PSFSTQ Trigger: CTGGGTAGAAAATGAAGGCAAAAGAAATGTCCACCC...AACACGTTCCTTTGGAGTGTCCATGAGAGTTAATTCCTTAAGTTGGTATATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR-3UTR CAA 90 bp | AACAATCTAGTCTCATCTCCAAAAGTCCCACTAGCTTTTCTCTCTTCTCGTTCATCTACCACTTATTCCTaGGTCATTCTTTTCAAAGTC | + |
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Preference number: 3 (lower is better) Translates to: NNLVSSPKVPLAFLSSRSSTTYS*VILFKV Trigger: GACTTTGAAAAGAATGACCAAGGAATAAGTGGTAGA...TGAACGAGAAGAGAGAAAAGCTAGTGGGACTTTTGGAGATGAGACTAGATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR TCA 72 bp | GCAAGTAAACAAAGTGTTCAGTCAACTTCCTTTAAGTaGAATTACTTCCTATTCCTTCCCCAACAGAGGGTA | + |
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Preference number: 3 (lower is better) Translates to: ASKQSVQSTSFK*NYFLFLPQQRV Trigger: TACCCTCTGTTGGGGAAGGAATAGGAAGTAATTTCACTTAAAGGAAGTTGACTGAACACTTTGTTTACTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR TCA 90 bp | TACTTCCTATTCCTTCCCCAACAGAGGGTAGTGCAGGGGGTGGACATTTCTTTTAAAGCAAGATGGCAGTaGGGTGGGCACTGCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: YFLFLPQQRVVQGVDISFKARWQ*GGHCRW Trigger: CCACCTGCAGTGCCCACCTCACTGCCATCTTGCTTT...AAAAGAAATGTCCACCCCCTGCACTACCCTCTGTTGGGGAAGGAATAGGAAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR TCA 90 bp | TACTTCCTATTCCTTCCCCAACAGAGGGTAGTGCAGGGGGTGGACATTTCTTTTAAGTACATGGGGGTATaGAGCCGACTGGAGGAGATA | + |
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Preference number: 4 (lower is better) Translates to: YFLFLPQQRVVQGVDISFKYMGV*SRLEEI Trigger: TATCTCCTCCAGTCGGCTTCATACCCCCATGTACTT...AAAAGAAATGTCCACCCCCTGCACTACCCTCTGTTGGGGAAGGAATAGGAAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR TCA 90 bp | TCAGAGCAGCTAAGTTTAAGAGGGATTGGGTTGCTTAAGGAGACAGTCATTTTTCACCATCTCCAGGGCTaGTGTGTCTGCACAAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SEQLSLRGIGLLKETVIFHHLQG*CVCTSQ Trigger: CTGGCTTGTGCAGACACATCAGCCCTGGAGATGGTG...AAAAATGACTGTCTCCTTAAGCAACCCAATCCCTCTTAAACTTAGCTGCTCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR TCA 90 bp | AAGATATACCAACTTAAGGAATTAACTCTCATGGACACTCCAAAGGAACGTGTTCACCATCTCCAGGGCTaGTGTGTCTGCACAAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: KIYQLKELTLMDTPKERVHHLQG*CVCTSQ Trigger: CTGGCTTGTGCAGACACATCAGCCCTGGAGATGGTG...AACACGTTCCTTTGGAGTGTCCATGAGAGTTAATTCCTTAAGTTGGTATATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR TCA 90 bp | TGGCTGAGGAAAGAGAGGTCAAAAGATTTCCTTGAATACACTCATTTATCAAGTAAAGCAAGATGGCAGTaGGGTGGGCACTGCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: WLRKERSKDFLEYTHLSSKARWQ*GGHCRW Trigger: CCACCTGCAGTGCCCACCTCACTGCCATCTTGCTTT...ACTTGATAAATGAGTGTATTCAAGGAAATCTTTTGACCTCTCTTTCCTCAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR TCA 90 bp | TCAGAGCAGCTAAGTTTAAGAGGGATTGGGTTGCTTAAGGAGACAGTCATTTTTAAGTACATGGGGGTATaGAGCCGACTGGAGGAGATA | + |
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Preference number: 4 (lower is better) Translates to: SEQLSLRGIGLLKETVIFKYMGV*SRLEEI Trigger: TATCTCCTCCAGTCGGCTTCATACCCCCATGTACTT...AAAAATGACTGTCTCCTTAAGCAACCCAATCCCTCTTAAACTTAGCTGCTCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR TCA 90 bp | TCAGAGCAGCTAAGTTTAAGAGGGATTGGGTTGCTTAAGGAGACAGTCATTTTTGGCTCTGCTGTTTCCTaGGAGGTAGAACAGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: SEQLSLRGIGLLKETVIFGSAVS*EVEQHL Trigger: AAGATGCTGTTCTACCTCTCAGGAAACAGCAGAGCC...AAAAATGACTGTCTCCTTAAGCAACCCAATCCCTCTTAAACTTAGCTGCTCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR GCA 90 bp | TATATTGTTTTGAAAGATCTTTCTAGAGTGGCCTGTTTACATGAAGAGGCAGCTCTGGCTCACACAGCCTaGATAGGAGATGGCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: YIVLKDLSRVACLHEEAALAHTA*IGDGSA Trigger: AGCAGAGCCATCTCCTATGCAGGCTGTGTGAGCCAG...AGCTGCCTCTTCATGTAAACAGGCCACTCTAGAAAGATCTTTCAAAACAATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR CCA 90 bp | TCAGAGCAGCTAAGTTTAAGAGGGATTGGGTTGCTTAAGGAGACAGTCATTTTTCAGACCCTCTGTGTTTaGGATGCCGAGCAGGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SEQLSLRGIGLLKETVIFQTLCV*DAEQDK Trigger: TTTATCCTGCTCGGCATCCCAAACACAGAGGGTCTG...AAAAATGACTGTCTCCTTAAGCAACCCAATCCCTCTTAAACTTAGCTGCTCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR GCA 90 bp | AACAATCTAGTCTCATCTCCAAAAGTCCCACTAGCTTTTCTCTCTTCTCGTTCACATAGGAGATGGCTCTaGTGTTTCCTGAGAGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: NNLVSSPKVPLAFLSSRSHRRWL*CFLRGR Trigger: TCTACCTCTCAGGAAACAGCAGAGCCATCTCCTATG...TGAACGAGAAGAGAGAAAAGCTAGTGGGACTTTTGGAGATGAGACTAGATTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR GCA 90 bp | AAGATGGCTTCTCTAAAGCAGACATTTGAGGAAAATTTAACTGCATCCAAAATGCTGGCTCACACAGCCTaGATAGGAGATGGCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KMASLKQTFEENLTASKMLAHTA*IGDGSA Trigger: AGCAGAGCCATCTCCTATGCAGGCTGTGTGAGCCAG...CATTTTGGATGCAGTTAAATTTTCCTCAAATGTCTGCTTTAGAGAAGCCATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR CCA 90 bp | TGGCTGAGGAAAGAGAGGTCAAAAGATTTCCTTGAATACACTCATTTATCAAGTCAGACCCTCTGTGTTTaGGATGCCGAGCAGGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: WLRKERSKDFLEYTHLSSQTLCV*DAEQDK Trigger: TTTATCCTGCTCGGCATCCCAAACACAGAGGGTCTG...ACTTGATAAATGAGTGTATTCAAGGAAATCTTTTGACCTCTCTTTCCTCAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR GCA 90 bp | AAGATATACCAACTTAAGGAATTAACTCTCATGGACACTCCAAAGGAACGTGTTCATAGGAGATGGCTCTaGTGTTTCCTGAGAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KIYQLKELTLMDTPKERVHRRWL*CFLRGR Trigger: TCTACCTCTCAGGAAACAGCAGAGCCATCTCCTATG...AACACGTTCCTTTGGAGTGTCCATGAGAGTTAATTCCTTAAGTTGGTATATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR CCA 90 bp | TGGCTGAGGAAAGAGAGGTCAAAAGATTTCCTTGAATACACTCATTTATCAAGTGGTAGAACAGCATCTTaGGAGAACTCACAGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WLRKERSKDFLEYTHLSSGRTAS*ENSQKG Trigger: TCCCTTCTGTGAGTTCTCCCAAGATGCTGTTCTACC...ACTTGATAAATGAGTGTATTCAAGGAAATCTTTTGACCTCTCTTTCCTCAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR CCA 90 bp | AAGATGGCTTCTCTAAAGCAGACATTTGAGGAAAATTTAACTGCATCCAAAATGGGTAGAACAGCATCTTaGGAGAACTCACAGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KMASLKQTFEENLTASKMGRTAS*ENSQKG Trigger: TCCCTTCTGTGAGTTCTCCCAAGATGCTGTTCTACC...CATTTTGGATGCAGTTAAATTTTCCTCAAATGTCTGCTTTAGAGAAGCCATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR TCA 90 bp | AACAATCTAGTCTCATCTCCAAAAGTCCCACTAGCTTTTCTCTCTTCTCGTTCAAGTTTCCCATCAGAGTaGAGATGTAGAAAGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NNLVSSPKVPLAFLSSRSSFPSE*RCRKTK Trigger: TTTTGTCTTTCTACATCTTCACTCTGATGGGAAACT...TGAACGAGAAGAGAGAAAAGCTAGTGGGACTTTTGGAGATGAGACTAGATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR GCA 90 bp | AAGATATACCAACTTAAGGAATTAACTCTCATGGACACTCCAAAGGAACGTGTTAGATTATTTAAGACCTaGACAGTTGCATCCAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KIYQLKELTLMDTPKERVRLFKT*TVASSQ Trigger: TTGGCTGGATGCAACTGTGCAGGTCTTAAATAATCT...AACACGTTCCTTTGGAGTGTCCATGAGAGTTAATTCCTTAAGTTGGTATATCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR TCA 90 bp | AAGATGGCTTCTCTAAAGCAGACATTTGAGGAAAATTTAACTGCATCCAAAATGAGTTTCCCATCAGAGTaGAGATGTAGAAAGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KMASLKQTFEENLTASKMSFPSE*RCRKTK Trigger: TTTTGTCTTTCTACATCTTCACTCTGATGGGAAACT...CATTTTGGATGCAGTTAAATTTTCCTCAAATGTCTGCTTTAGAGAAGCCATCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR CCA 90 bp | AAGATGGCTTCTCTAAAGCAGACATTTGAGGAAAATTTAACTGCATCCAAAATGGTATATGAGGACAACTaGCATGTAGAAAAGCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KMASLKQTFEENLTASKMVYEDN*HVEKQD Trigger: ATCTTGCTTTTCTACATGCCAGTTGTCCTCATATAC...CATTTTGGATGCAGTTAAATTTTCCTCAAATGTCTGCTTTAGAGAAGCCATCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| 3UTR CAA 72 bp | CAAGTTTCAGAGCAGCTAAGTTTAAGAGGGATTGGGTaGCTTAAGGAGACAGTCATTTTTAGAAAAGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QVSEQLSLRGIG*LKETVIFRKVF Trigger: AAAAACTTTTCTAAAAATGACTGTCTCCTTAAGCAACCCAATCCCTCTTAAACTTAGCTGCTCTGAAACTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR CAA 90 bp | TACTTCCTATTCCTTCCCCAACAGAGGGTAGTGCAGGGGGTGGACATTTCTTTTCATCCAGCCAAGGGCTaGGAGTTGGTCTTAAGTATA | + |
|
Preference number: 5 (lower is better) Translates to: YFLFLPQQRVVQGVDISFHPAKG*ELVLSI Trigger: TATACTTAAGACCAACTCCAAGCCCTTGGCTGGATG...AAAAGAAATGTCCACCCCCTGCACTACCCTCTGTTGGGGAAGGAATAGGAAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS CCA 90 bp | AGACAAAAACAGGACAAAGAGCATAGTTTCCAGACCCTCTGTGTTTaGGATGCCGAGCAGGATAAACTGAGTCACTACGGAACGATTCCT | + |
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Preference number: 5 (lower is better) Translates to: RQKQDKEHSFQTLCV*DAEQDKLSHYGTIP Trigger: AGGAATCGTTCCGTAGTGACTCAGTTTATCCTGCTCGGCATCCCAAACACAGAGGGTCTGGAAACTATGCTCTTTGTCCTGTTTTTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079178.3 ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR CAA 90 bp | AACAATCTAGTCTCATCTCCAAAAGTCCCACTAGCTTTTCTCTCTTCTCGTTCATTAAGACCTGCACAGTaGCATCCAGCCAAGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NNLVSSPKVPLAFLSSRSLRPAQ*HPAKGL Trigger: CAAGCCCTTGGCTGGATGCAACTGTGCAGGTCTTAA...TGAACGAGAAGAGAGAAAAGCTAGTGGGACTTTTGGAGATGAGACTAGATTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR CAA 90 bp | AACAATCTAGTCTCATCTCCAAAAGTCCCACTAGCTTTTCTCTCTTCTCGTTCACATCCAGCCAAGGGCTaGGAGTTGGTCTTAAGTATA | + |
|
Preference number: 5 (lower is better) Translates to: NNLVSSPKVPLAFLSSRSHPAKG*ELVLSI Trigger: TATACTTAAGACCAACTCCAAGCCCTTGGCTGGATG...TGAACGAGAAGAGAGAAAAGCTAGTGGGACTTTTGGAGATGAGACTAGATTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS-3UTR CAA 90 bp | AAGATATACCAACTTAAGGAATTAACTCTCATGGACACTCCAAAGGAACGTGTTTTAAGACCTGCACAGTaGCATCCAGCCAAGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KIYQLKELTLMDTPKERVLRPAQ*HPAKGL Trigger: CAAGCCCTTGGCTGGATGCAACTGTGCAGGTCTTAA...AACACGTTCCTTTGGAGTGTCCATGAGAGTTAATTCCTTAAGTTGGTATATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS CCA 72 bp | CAGGACAAAGAGCATAGTTTCCAGACCCTCTGTGTTTaGGATGCCGAGCAGGATAAACTGAGTCACTACGGA | + |
|
Preference number: 6 (lower is better) Translates to: QDKEHSFQTLCV*DAEQDKLSHYG Trigger: TCCGTAGTGACTCAGTTTATCCTGCTCGGCATCCCAAACACAGAGGGTCTGGAAACTATGCTCTTTGTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079178.3 ENSMUST00000215194.2 ENSMUST00000216298.2 |
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| CDS TCA 72 bp | CATCCAGCCAAGGGCTTGGAGTTGGTCTTAAGTATATaGGGACAACTGGCATGTAGAAAAGCAAGATGGCAG | + |
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Preference number: 6 (lower is better) Translates to: HPAKGLELVLSI*GQLACRKARWQ Trigger: CTGCCATCTTGCTTTTCTACATGCCAGTTGTCCTCATATACTTAAGACCAACTCCAAGCCCTTGGCTGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079178.3 ENSMUST00000215194.2 ENSMUST00000216298.2 |
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