Pregenerated sensors for OLFR958 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050853Ensembl transcript IDs: ENSMUST00000062545.3, ENSMUST00000215505.2, ENSMUST00000217227.2
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACTCTGGCCCTGGGGACGAAGGGAAAAGGGTAAGAGGAGTGCTCTaGGCTAGCTCAGAGGTGATAGTCTGGCTAGCTCAGGCAGCTAGC | + |
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Preference number: 1 (lower is better) Translates to: DSGPGDEGKRVRGVL*ASSEVIVWLAQAAS Trigger: GCTAGCTGCCTGAGCTAGCCAGACTATCACCTCTGAGCTAGCTCAGAGCACTCCTCTTACCCTTTTCCCTTCGTCCCCAGGGCCAGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR CCA 90 bp | ACATCCCAGAAGCCACTGTGTGTTACAGAAGAACTGAGAACAAAGTaGGGAGCCTCGGGCAGACTCTGGCCCTGGGGACGAAGGGAAAAG | + |
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Preference number: 1 (lower is better) Translates to: TSQKPLCVTEELRTK*GASGRLWPWGRREK Trigger: CTTTTCCCTTCGTCCCCAGGGCCAGAGTCTGCCCGAGGCTCCCCACTTTGTTCTCAGTTCTTCTGTAACACACAGTGGCTTCTGGGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR CCA 90 bp | GGGTCCCTGGGCCGCACGGAGGCCAGGGGCATCAATTTCTCATCTTaGACATCCCAGAAGCCACTGTGTGTTACAGAAGAACTGAGAACA | + |
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Preference number: 1 (lower is better) Translates to: GSLGRTEARGINFSS*TSQKPLCVTEELRT Trigger: TGTTCTCAGTTCTTCTGTAACACACAGTGGCTTCTGGGATGTCCAAGATGAGAAATTGATGCCCCTGGCCTCCGTGCGGCCCAGGGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR CCA 90 bp | AGATCCCTGGCTGACCTGCCAGAGTCTGGCTCCAACTGTCGGGCACCACAGACAGCTGCTTGGTTAGACTaGTGGCCATGGCTGGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: RSLADLPESGSNCRAPQTAAWLD*WPWLEH Trigger: GTGCTCCAGCCATGGCCACCAGTCTAACCAAGCAGC...TGTCTGTGGTGCCCGACAGTTGGAGCCAGACTCTGGCAGGTCAGCCAGGGATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTGACCTGCCAGAGTCTGGCTCCAACTGTCGGGCACCACAGACACCACTGTCAGAGGTGATAGTCTaGCTAGCTCAGGCAGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: LADLPESGSNCRAPQTPLSEVIV*LAQAAS Trigger: GCTAGCTGCCTGAGCTAGCCAGACTATCACCTCTGA...CAGTGGTGTCTGTGGTGCCCGACAGTTGGAGCCAGACTCTGGCAGGTCAGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR CCA 90 bp | AGATCCCTGGCTGACCTGCCAGAGTCTGGCTCCAACTGTCGGGCACCACAGACAATTGCCACAGAATTATaGAGCTGGGGCCAGGAACCC | + |
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Preference number: 2 (lower is better) Translates to: RSLADLPESGSNCRAPQTIATEL*SWGQEP Trigger: GGGTTCCTGGCCCCAGCTCCATAATTCTGTGGCAAT...TGTCTGTGGTGCCCGACAGTTGGAGCCAGACTCTGGCAGGTCAGCCAGGGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR CCA 90 bp | GTTACAGAAGAACTGAGAACAAAGTGGGGAGCCTCGGGCAGACTCTGGCCCTGGGCTGCTTGGTTAGACTaGTGGCCATGGCTGGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: VTEELRTKWGASGRLWPWAAWLD*WPWLEH Trigger: GTGCTCCAGCCATGGCCACCAGTCTAACCAAGCAGC...CCAGGGCCAGAGTCTGCCCGAGGCTCCCCACTTTGTTCTCAGTTCTTCTGTAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR TCA 90 bp | AGATCCCTGGCTGACCTGCCAGAGTCTGGCTCCAACTGTCGGGCACCACAGACAGTAAGAGGAGTGCTCTaGGCTAGCTCAGAGGTGATA | + |
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Preference number: 2 (lower is better) Translates to: RSLADLPESGSNCRAPQTVRGVL*ASSEVI Trigger: TATCACCTCTGAGCTAGCTCAGAGCACTCCTCTTAC...TGTCTGTGGTGCCCGACAGTTGGAGCCAGACTCTGGCAGGTCAGCCAGGGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGCTGACCTGCCAGAGTCTGGCTCCAACTGTCGGGCACCACAGACACCACTGTGGCTATTTTCCTGTTaGCAGGTAACTGTGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LADLPESGSNCRAPQTPLWLFSC*QVTVRR Trigger: CCTCCTCACAGTTACCTGGCAACAGGAAAATAGCCA...CAGTGGTGTCTGTGGTGCCCGACAGTTGGAGCCAGACTCTGGCAGGTCAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR CCA 90 bp | AGATCCCTGGCTGACCTGCCAGAGTCTGGCTCCAACTGTCGGGCACCACAGACACAGGAACCCAGTGTTTaGGAGCATAGCAAACAGGTC | + |
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Preference number: 2 (lower is better) Translates to: RSLADLPESGSNCRAPQTQEPSV*EHSKQV Trigger: GACCTGTTTGCTATGCTCCCAAACACTGGGTTCCTG...TGTCTGTGGTGCCCGACAGTTGGAGCCAGACTCTGGCAGGTCAGCCAGGGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR CCA 90 bp | GTTACAGAAGAACTGAGAACAAAGTGGGGAGCCTCGGGCAGACTCTGGCCCTGGCCAGCCATGGCCACTTaGAGAGAAAGAGAGAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: VTEELRTKWGASGRLWPWPAMAT*RERERE Trigger: CTCCCTCTCTCTTTCTCTCCAAGTGGCCATGGCTGG...CCAGGGCCAGAGTCTGCCCGAGGCTCCCCACTTTGTTCTCAGTTCTTCTGTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR CAA 90 bp | TGGGTCCCTGGGCCGCACGGAGGCCAGGGGCATCAATTTCTCATCTaGGACATCCCAGAAGCCACTGTGTGTTACAGAAGAACTGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: WVPGPHGGQGHQFLI*DIPEATVCYRRTEN Trigger: GTTCTCAGTTCTTCTGTAACACACAGTGGCTTCTGGGATGTCCAAGATGAGAAATTGATGCCCCTGGCCTCCGTGCGGCCCAGGGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR CAA 90 bp | GAGGTGATAGTCTGGCTAGCTCAGGCAGCTAGCTCAGCAGGCTGCTaGGTTAGACTGGTGGCCATGGCTGGAGCACAAGAAGATTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: EVIVWLAQAASSAGC*VRLVAMAGAQEDFL Trigger: AAGGAAATCTTCTTGTGCTCCAGCCATGGCCACCAGTCTAACCAAGCAGCCTGCTGAGCTAGCTGCCTGAGCTAGCCAGACTATCACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR TCA 90 bp | AGATCCCTGGCTGACCTGCCAGAGTCTGGCTCCAACTGTCGGGCACCACAGACATCCAGACAGCCTACATaGCTGATTGCCACAGAATTA | + |
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Preference number: 2 (lower is better) Translates to: RSLADLPESGSNCRAPQTSRQPT*LIATEL Trigger: TAATTCTGTGGCAATCAGTCATGTAGGCTGTCTGGA...TGTCTGTGGTGCCCGACAGTTGGAGCCAGACTCTGGCAGGTCAGCCAGGGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR CCA 90 bp | CTCGGAGAGTTTGACTGCATAGCAGAACCGCTGGGCCAGCATTGGACTGTTGGAATTGCCACAGAATTATaGAGCTGGGGCCAGGAACCC | + |
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Preference number: 2 (lower is better) Translates to: LGEFDCIAEPLGQHWTVGIATEL*SWGQEP Trigger: GGGTTCCTGGCCCCAGCTCCATAATTCTGTGGCAAT...TCCAACAGTCCAATGCTGGCCCAGCGGTTCTGCTATGCAGTCAAACTCTCCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAGCCAGCCATGGCCACTTGGAGAGAAAGAGAGAGGGAGGGAGGGGAGAGTATGGCTATTTTCCTGTTaGCAGGTAACTGTGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: RSQPWPLGEKERGREGRVWLFSC*QVTVRR Trigger: CCTCCTCACAGTTACCTGGCAACAGGAAAATAGCCA...TACTCTCCCCTCCCTCCCTCTCTCTTTCTCTCCAAGTGGCCATGGCTGGCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR CCA 90 bp | CTCGGAGAGTTTGACTGCATAGCAGAACCGCTGGGCCAGCATTGGACTGTTGGAACAGAATTATGGAGCTaGGGCCAGGAACCCAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: LGEFDCIAEPLGQHWTVGTELWS*GQEPSV Trigger: AACACTGGGTTCCTGGCCCCAGCTCCATAATTCTGT...TCCAACAGTCCAATGCTGGCCCAGCGGTTCTGCTATGCAGTCAAACTCTCCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR TCA 90 bp | GTTACAGAAGAACTGAGAACAAAGTGGGGAGCCTCGGGCAGACTCTGGCCCTGGTGGGAAGGTTTGGAGTaGAGAAAAGCAAGGGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: VTEELRTKWGASGRLWPWWEGLE*RKAREK Trigger: TTTCTCCCTTGCTTTTCTTCACTCCAAACCTTCCCA...CCAGGGCCAGAGTCTGCCCGAGGCTCCCCACTTTGTTCTCAGTTCTTCTGTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCCAGCCATGGCCACTTGGAGAGAAAGAGAGAGGGAGGGAGGGGAGAGTATGGATGAAGCTTTTGTaGGAGAGACCTTCTTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: RSQPWPLGEKERGREGRVWMKLL*ERPSFL Trigger: CAGAAAAGAAGGTCTCTCTCACAAAAGCTTCATCCA...TACTCTCCCCTCCCTCCCTCTCTCTTTCTCTCCAAGTGGCCATGGCTGGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR TCA 90 bp | GTGATAGTCTGGCTAGCTCAGGCAGCTAGCTCAGCAGGCTGCTTGGTTAGACTGTGGGAAGGTTTGGAGTaGAGAAAAGCAAGGGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: VIVWLAQAASSAGCLVRLWEGLE*RKAREK Trigger: TTTCTCCCTTGCTTTTCTTCACTCCAAACCTTCCCA...CAGTCTAACCAAGCAGCCTGCTGAGCTAGCTGCCTGAGCTAGCCAGACTATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTTAGACTGGTGGCCATGGCTGGAGCACAAGAAGATTTCCTTGGCAGGAGGTAGATCTATAGGCAACTaGGGAAAGCTAGAAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: WLDWWPWLEHKKISLAGGRSIGN*GKLEAG Trigger: TCCTGCTTCTAGCTTTCCTCAGTTGCCTATAGATCT...ACCTCCTGCCAAGGAAATCTTCTTGTGCTCCAGCCATGGCCACCAGTCTAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTTAGACTGGTGGCCATGGCTGGAGCACAAGAAGATTTCCTTGGCAGGAGGTTCCAGACAGCCTACATaGCTGATTGCCACAGAATTA | + |
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Preference number: 2 (lower is better) Translates to: WLDWWPWLEHKKISLAGGSRQPT*LIATEL Trigger: TAATTCTGTGGCAATCAGTCATGTAGGCTGTCTGGA...ACCTCCTGCCAAGGAAATCTTCTTGTGCTCCAGCCATGGCCACCAGTCTAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTTAGACTGGTGGCCATGGCTGGAGCACAAGAAGATTTCCTTGGCAGGAGGTAACCAGAAAACAGGCTaGCTTTCACAGTCCCACATA | + |
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Preference number: 2 (lower is better) Translates to: WLDWWPWLEHKKISLAGGNQKTG*LSQSHI Trigger: TATGTGGGACTGTGAAAGGCAGCCTGTTTTCTGGTT...ACCTCCTGCCAAGGAAATCTTCTTGTGCTCCAGCCATGGCCACCAGTCTAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTGGTTAGACTGGTGGCCATGGCTGGAGCACAAGAAGATTTCCTTGGCAGGAGCCTACATGACTGATTaGCACAGAATTATGGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: AWLDWWPWLEHKKISLAGAYMTD*HRIMEL Trigger: CAGCTCCATAATTCTGTGGCAATCAGTCATGTAGGC...TCCTGCCAAGGAAATCTTCTTGTGCTCCAGCCATGGCCACCAGTCTAACCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCTGGGGCCAGGAACCCAGTGTTTGGGAGCATAGCAAACAGGTCTTCTGTCCTTGCAGATTAATCTaGTGTTCTCTGGGGTTTAAA | + |
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Preference number: 2 (lower is better) Translates to: WSWGQEPSVWEHSKQVFCPCRLI*CSLGFK Trigger: TTTAAACCCCAGAGAACATCAGATTAATCTGCAAGG...ACAGAAGACCTGTTTGCTATGCTCCCAAACACTGGGTTCCTGGCCCCAGCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR GCA 90 bp | GTTACAGAAGAACTGAGAACAAAGTGGGGAGCCTCGGGCAGACTCTGGCCCTGGCAATTGGTTTTCCAGTaGCAAATGATCAGTAGTACA | + |
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Preference number: 2 (lower is better) Translates to: VTEELRTKWGASGRLWPWQLVFQ*QMISST Trigger: TGTACTACTGATCATTTGGCACTGGAAAACCAATTG...CCAGGGCCAGAGTCTGCCCGAGGCTCCCCACTTTGTTCTCAGTTCTTCTGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR GCA 90 bp | CTCGGAGAGTTTGACTGCATAGCAGAACCGCTGGGCCAGCATTGGACTGTTGGACAATTGGTTTTCCAGTaGCAAATGATCAGTAGTACA | + |
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Preference number: 2 (lower is better) Translates to: LGEFDCIAEPLGQHWTVGQLVFQ*QMISST Trigger: TGTACTACTGATCATTTGGCACTGGAAAACCAATTG...TCCAACAGTCCAATGCTGGCCCAGCGGTTCTGCTATGCAGTCAAACTCTCCGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR GCA 90 bp | GTGATAGTCTGGCTAGCTCAGGCAGCTAGCTCAGCAGGCTGCTTGGTTAGACTGTCACAGTCCCACATATaGCAAAACACATTTTTGTTA | + |
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Preference number: 2 (lower is better) Translates to: VIVWLAQAASSAGCLVRLSQSHI*QNTFLL Trigger: TAACAAAAATGTGTTTTGGCATATGTGGGACTGTGA...CAGTCTAACCAAGCAGCCTGCTGAGCTAGCTGCCTGAGCTAGCCAGACTATCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTGGTTAGACTGGTGGCCATGGCTGGAGCACAAGAAGATTTCCTTGGCAGGATCACAGTCCCACATATaGCAAAACACATTTTTGTTA | + |
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Preference number: 2 (lower is better) Translates to: AWLDWWPWLEHKKISLAGSQSHI*QNTFLL Trigger: TAACAAAAATGTGTTTTGGCATATGTGGGACTGTGA...TCCTGCCAAGGAAATCTTCTTGTGCTCCAGCCATGGCCACCAGTCTAACCAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR CAA 90 bp | CTAGAAGCAGGAGAGAGGTTCTTGCCCCAAGGAATGGCATACCAATaGGTTTTCCAGTGCCAAATGATCAGTAGTACACAAGTAATGTTA | + |
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Preference number: 2 (lower is better) Translates to: LEAGERFLPQGMAYQ*VFQCQMISSTQVML Trigger: TAACATTACTTGTGTACTACTGATCATTTGGCACTGGAAAACCAATTGGTATGCCATTCCTTGGGGCAAGAACCTCTCTCCTGCTTCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR TCA 72 bp | CTGGGGGTAAGGGAGACGCAGTCTGAGATCCCTGGCTaGCCTGCCAGAGTCTGGCTCCAACTGTCGGGCACC | + |
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Preference number: 3 (lower is better) Translates to: LGVRETQSEIPG*PARVWLQLSGT Trigger: GGTGCCCGACAGTTGGAGCCAGACTCTGGCAGGTCAGCCAGGGATCTCAGACTGCGTCTCCCTTACCCCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR CCA 72 bp | AGTCTGGCTCCAACTGTCGGGCACCACAGACACCACTaGGCACCCTGGAAAAGCCTGTTTATGGGTCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: SLAPTVGHHRHH*APWKSLFMGPW Trigger: CCAGGGACCCATAAACAGGCTTTTCCAGGGTGCCCAGTGGTGTCTGTGGTGCCCGACAGTTGGAGCCAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR CCA 72 bp | GAGTTTGACTGCATAGCAGAACCGCTGGGCCAGCATTaGACTGTTGGAAGCAGTGGATCCCACTCTGGGGGT | + |
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Preference number: 3 (lower is better) Translates to: EFDCIAEPLGQH*TVGSSGSHSGG Trigger: ACCCCCAGAGTGGGATCCACTGCTTCCAACAGTCCAATGCTGGCCCAGCGGTTCTGCTATGCAGTCAAACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR TCA 72 bp | GGACATCCCAGAAGCCACTGTGTGTTACAGAAGAACTaGGAACAAAGTGGGGAGCCTCGGGCAGACTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: GHPRSHCVLQKN*EQSGEPRADSG Trigger: GCCAGAGTCTGCCCGAGGCTCCCCACTTTGTTCTCAGTTCTTCTGTAACACACAGTGGCTTCTGGGATGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR GCA 72 bp | TGTGGGGGTGAAGTCCAGACAGCCTACATGACTGATTaGCACAGAATTATGGAGCTGGGGCCAGGAACCCAG | + |
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Preference number: 3 (lower is better) Translates to: CGGEVQTAYMTD*HRIMELGPGTQ Trigger: CTGGGTTCCTGGCCCCAGCTCCATAATTCTGTGGCAATCAGTCATGTAGGCTGTCTGGACTTCACCCCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR CCA 72 bp | ACAGAATTATGGAGCTGGGGCCAGGAACCCAGTGTTTaGGAGCATAGCAAACAGGTCTTCTGTCCCTTGCAG | + |
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Preference number: 3 (lower is better) Translates to: TELWSWGQEPSV*EHSKQVFCPLQ Trigger: CTGCAAGGGACAGAAGACCTGTTTGCTATGCTCCCAAACACTGGGTTCCTGGCCCCAGCTCCATAATTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR CCA 72 bp | ACTGGTGGCCATGGCTGGAGCACAAGAAGATTTCCTTaGCAGGAGGTTAGATGCTTGCCGCTCATTAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: TGGHGWSTRRFP*QEVRCLPLIRG Trigger: TCCTCTAATGAGCGGCAAGCATCTAACCTCCTGCCAAGGAAATCTTCTTGTGCTCCAGCCATGGCCACCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR GCA 72 bp | TTGCCCCAAGGAATGGCATACCAATTGGTTTTCCAGTaGCAAATGATCAGTAGTACACAAGTAATGTTATAT | + |
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Preference number: 3 (lower is better) Translates to: LPQGMAYQLVFQ*QMISSTQVMLY Trigger: ATATAACATTACTTGTGTACTACTGATCATTTGGCACTGGAAAACCAATTGGTATGCCATTCCTTGGGGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR TCA 90 bp | TGGAGCTGGGGCCAGGAACCCAGTGTTTGGGAGCATAGCAAACAGGTCTTCTGTGGATCCCCAGGAGGATaGACTCAGTCACCACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: WSWGQEPSVWEHSKQVFCGSPGG*TQSPLS Trigger: GCTCAGTGGTGACTGAGTTCATCCTCCTGGGGATCC...ACAGAAGACCTGTTTGCTATGCTCCCAAACACTGGGTTCCTGGCCCCAGCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR CCA 90 bp | CTGGCTGACCTGCCAGAGTCTGGCTCCAACTGTCGGGCACCACAGACACCACTGACGCCAATGGCAAGATaGCTGGTATGTCACAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LADLPESGSNCRAPQTPLTPMAR*LVCHRR Trigger: TCTTCTGTGACATACCAGCCATCTTGCCATTGGCGT...CAGTGGTGTCTGTGGTGCCCGACAGTTGGAGCCAGACTCTGGCAGGTCAGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR CCA 90 bp | AGATCCCTGGCTGACCTGCCAGAGTCTGGCTCCAACTGTCGGGCACCACAGACAATCAGCAGACGCCAATaGCAAGATGGCTGGTATGTC | + |
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Preference number: 4 (lower is better) Translates to: RSLADLPESGSNCRAPQTISRRQ*QDGWYV Trigger: GACATACCAGCCATCTTGCCATTGGCGTCTGCTGAT...TGTCTGTGGTGCCCGACAGTTGGAGCCAGACTCTGGCAGGTCAGCCAGGGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR TCA 90 bp | GCTTGGTTAGACTGGTGGCCATGGCTGGAGCACAAGAAGATTTCCTTGGCAGGAGAGTACCGAAGAGGGTaGCAAATGGCAGCAAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: AWLDWWPWLEHKKISLAGEYRRG*QMAAKR Trigger: CCGCTTTGCTGCCATTTGTCACCCTCTTCGGTACTC...TCCTGCCAAGGAAATCTTCTTGTGCTCCAGCCATGGCCACCAGTCTAACCAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR TCA 90 bp | GTGATAGTCTGGCTAGCTCAGGCAGCTAGCTCAGCAGGCTGCTTGGTTAGACTGCTGACGCCCCTCAGTTaGCTGAATACTCAAGATGGA | + |
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Preference number: 4 (lower is better) Translates to: VIVWLAQAASSAGCLVRLLTPLS*LNTQDG Trigger: TCCATCTTGAGTATTCAGTCAACTGAGGGGCGTCAG...CAGTCTAACCAAGCAGCCTGCTGAGCTAGCTGCCTGAGCTAGCCAGACTATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR CCA 90 bp | TGGTTAGACTGGTGGCCATGGCTGGAGCACAAGAAGATTTCCTTGGCAGGAGGTAAAGCCCTCTGTGTGTaGGATCCCCAGGAGGATGAA | + |
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Preference number: 4 (lower is better) Translates to: WLDWWPWLEHKKISLAGGKALCV*DPQEDE Trigger: TTCATCCTCCTGGGGATCCCACACACAGAGGGCTTT...ACCTCCTGCCAAGGAAATCTTCTTGTGCTCCAGCCATGGCCACCAGTCTAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR TCA 90 bp | AAGACAGGGGGAGAAAATAGAGAAGTAGAAGCCAGCCATGGCCACTTGGAGAGAGAGTACCGAAGAGGGTaGCAAATGGCAGCAAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: KTGGENREVEASHGHLEREYRRG*QMAAKR Trigger: CCGCTTTGCTGCCATTTGTCACCCTCTTCGGTACTC...TCTCTCCAAGTGGCCATGGCTGGCTTCTACTTCTCTATTTTCTCCCCCTGTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR TCA 90 bp | TGGTTAGACTGGTGGCCATGGCTGGAGCACAAGAAGATTTCCTTGGCAGGAGGTCTAACCCTCAGAAACTaGCCCCTTCCCATGCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: WLDWWPWLEHKKISLAGGLTLRN*PLPMQY Trigger: ATACTGCATGGGAAGGGGTCAGTTTCTGAGGGTTAG...ACCTCCTGCCAAGGAAATCTTCTTGTGCTCCAGCCATGGCCACCAGTCTAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR CCA 90 bp | AGAAGCCAGCCATGGCCACTTGGAGAGAAAGAGAGAGGGAGGGAGGGGAGAGTACAAAGGGTTCAGCATTaGACCTACCAAGTTCATCAG | + |
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Preference number: 4 (lower is better) Translates to: RSQPWPLGEKERGREGRVQRVQH*TYQVHQ Trigger: CTGATGAACTTGGTAGGTCCAATGCTGAACCCTTTG...TACTCTCCCCTCCCTCCCTCTCTCTTTCTCTCCAAGTGGCCATGGCTGGCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR TCA 90 bp | GCCATGAATCTGAAGGAAAGTGGGAAAGGATATGTGGGAAGGTTTGGAGTGAAGGGATCCCCAGGAGGATaGACTCAGTCACCACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: AMNLKESGKGYVGRFGVKGSPGG*TQSPLS Trigger: GCTCAGTGGTGACTGAGTTCATCCTCCTGGGGATCC...CTTCACTCCAAACCTTCCCACATATCCTTTCCCACTTTCCTTCAGATTCATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR TCA 90 bp | CTCGGAGAGTTTGACTGCATAGCAGAACCGCTGGGCCAGCATTGGACTGTTGGATGTATGAAGGCGAGTTaGGGAAATAACAGCCACAAG | + |
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Preference number: 4 (lower is better) Translates to: LGEFDCIAEPLGQHWTVGCMKAS*GNNSHK Trigger: CTTGTGGCTGTTATTTCCTCAACTCGCCTTCATACA...TCCAACAGTCCAATGCTGGCCCAGCGGTTCTGCTATGCAGTCAAACTCTCCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR CCA 90 bp | TGGAGCTGGGGCCAGGAACCCAGTGTTTGGGAGCATAGCAAACAGGTCTTCTGTCAAAGGGTTCAGCATTaGACCTACCAAGTTCATCAG | + |
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Preference number: 4 (lower is better) Translates to: WSWGQEPSVWEHSKQVFCQRVQH*TYQVHQ Trigger: CTGATGAACTTGGTAGGTCCAATGCTGAACCCTTTG...ACAGAAGACCTGTTTGCTATGCTCCCAAACACTGGGTTCCTGGCCCCAGCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR TCA 90 bp | AGAAGCCAGCCATGGCCACTTGGAGAGAAAGAGAGAGGGAGGGAGGGGAGAGTAAAATACATGGGTGTATaGAGGCGAGTTGAGGAAATA | + |
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Preference number: 4 (lower is better) Translates to: RSQPWPLGEKERGREGRVKYMGV*RRVEEI Trigger: TATTTCCTCAACTCGCCTTCATACACCCATGTATTT...TACTCTCCCCTCCCTCCCTCTCTCTTTCTCTCCAAGTGGCCATGGCTGGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR CCA 90 bp | AAGACAGGGGGAGAAAATAGAGAAGTAGAAGCCAGCCATGGCCACTTGGAGAGAACGCCAATGGCAAGATaGCTGGTATGTCACAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: KTGGENREVEASHGHLERTPMAR*LVCHRR Trigger: TCTTCTGTGACATACCAGCCATCTTGCCATTGGCGT...TCTCTCCAAGTGGCCATGGCTGGCTTCTACTTCTCTATTTTCTCCCCCTGTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR TCA 90 bp | GCTTGGTTAGACTGGTGGCCATGGCTGGAGCACAAGAAGATTTCCTTGGCAGGATCAAGATGGAGATTGTaGTTCGTGTATAGGACAGAA | + |
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Preference number: 4 (lower is better) Translates to: AWLDWWPWLEHKKISLAGSRWRL*FVYRTE Trigger: TTCTGTCCTATACACGAATCACAATCTCCATCTTGA...TCCTGCCAAGGAAATCTTCTTGTGCTCCAGCCATGGCCACCAGTCTAACCAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR GCA 90 bp | GAAAGTGGGAAAGGATATGTGGGAAGGTTTGGAGTGAAGAAAAGCAAGGGAGAAATCCTAATAGCCATGTaGCCACAGCTAGAGCCACAC | + |
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Preference number: 4 (lower is better) Translates to: ESGKGYVGRFGVKKSKGEILIAM*PQLEPH Trigger: GTGTGGCTCTAGCTGTGGGCACATGGCTATTAGGAT...TTCTCCCTTGCTTTTCTTCACTCCAAACCTTCCCACATATCCTTTCCCACTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR TCA 90 bp | TCTGAAGGAAAGTGGGAAAGGATATGTGGGAAGGTTTGGAGTGAAGAAAAGCAACTAACCCTCAGAAACTaGCCCCTTCCCATGCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: SEGKWERICGKVWSEEKQLTLRN*PLPMQY Trigger: ATACTGCATGGGAAGGGGTCAGTTTCTGAGGGTTAG...TTGCTTTTCTTCACTCCAAACCTTCCCACATATCCTTTCCCACTTTCCTTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR GCA 90 bp | TCTGAAGGAAAGTGGGAAAGGATATGTGGGAAGGTTTGGAGTGAAGAAAAGCAAATCCTAATAGCCATGTaGCCACAGCTAGAGCCACAC | + |
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Preference number: 4 (lower is better) Translates to: SEGKWERICGKVWSEEKQILIAM*PQLEPH Trigger: GTGTGGCTCTAGCTGTGGGCACATGGCTATTAGGAT...TTGCTTTTCTTCACTCCAAACCTTCCCACATATCCTTTCCCACTTTCCTTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR CAA 72 bp | GGAGAGAGGTTCTTGCCCCAAGGAATGGCATACCAATaGGTTTTCCAGTGCCAAATGATCAGTAGTACACAA | + |
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Preference number: 4 (lower is better) Translates to: GERFLPQGMAYQ*VFQCQMISSTQ Trigger: TTGTGTACTACTGATCATTTGGCACTGGAAAACCAATTGGTATGCCATTCCTTGGGGCAAGAACCTCTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR CCA 90 bp | TGTGTGCATGCAATAACAATTAGAGTAACAAGAGGCCATGAATCTGAAGGAAAGAAAGCCCTCTGTGTGTaGGATCCCCAGGAGGATGAA | + |
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Preference number: 4 (lower is better) Translates to: CVHAITIRVTRGHESEGKKALCV*DPQEDE Trigger: TTCATCCTCCTGGGGATCCCACACACAGAGGGCTTT...CTTTCCTTCAGATTCATGGCCTCTTGTTACTCTAATTGTTATTGCATGCACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR TCA 90 bp | TGTGTGCATGCAATAACAATTAGAGTAACAAGAGGCCATGAATCTGAAGGAAAGCTGACGCCCCTCAGTTaGCTGAATACTCAAGATGGA | + |
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Preference number: 4 (lower is better) Translates to: CVHAITIRVTRGHESEGKLTPLS*LNTQDG Trigger: TCCATCTTGAGTATTCAGTCAACTGAGGGGCGTCAG...CTTTCCTTCAGATTCATGGCCTCTTGTTACTCTAATTGTTATTGCATGCACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR GCA 90 bp | GAAAGTGGGAAAGGATATGTGGGAAGGTTTGGAGTGAAGAAAAGCAAGGGAGAAAAGTTCATCAGAATTTaGACGACAGTTCCCAGCATG | + |
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Preference number: 4 (lower is better) Translates to: ESGKGYVGRFGVKKSKGEKFIRI*TTVPSM Trigger: CATGCTGGGAACTGTCGTGCAAATTCTGATGAACTT...TTCTCCCTTGCTTTTCTTCACTCCAAACCTTCCCACATATCCTTTCCCACTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR TCA 90 bp | TGTGTGCATGCAATAACAATTAGAGTAACAAGAGGCCATGAATCTGAAGGAAAGTGTATGAAGGCGAGTTaGGGAAATAACAGCCACAAG | + |
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Preference number: 4 (lower is better) Translates to: CVHAITIRVTRGHESEGKCMKAS*GNNSHK Trigger: CTTGTGGCTGTTATTTCCTCAACTCGCCTTCATACA...CTTTCCTTCAGATTCATGGCCTCTTGTTACTCTAATTGTTATTGCATGCACACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR TCA 90 bp | TCTGAAGGAAAGTGGGAAAGGATATGTGGGAAGGTTTGGAGTGAAGAAAAGCAATCAAGATGGAGATTGTaGTTCGTGTATAGGACAGAA | + |
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Preference number: 4 (lower is better) Translates to: SEGKWERICGKVWSEEKQSRWRL*FVYRTE Trigger: TTCTGTCCTATACACGAATCACAATCTCCATCTTGA...TTGCTTTTCTTCACTCCAAACCTTCCCACATATCCTTTCCCACTTTCCTTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR GCA 90 bp | TCTGAAGGAAAGTGGGAAAGGATATGTGGGAAGGTTTGGAGTGAAGAAAAGCAAACAGAAAGCACTCAATaGTCCCAAGAAAATGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: SEGKWERICGKVWSEEKQTESTQ*SQENER Trigger: TCTTTCATTTTCTTGGGAGCATTGAGTGCTTTCTGT...TTGCTTTTCTTCACTCCAAACCTTCCCACATATCCTTTCCCACTTTCCTTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR GCA 90 bp | CTTTTTGTCTTTCTGCTTAAGATTGTCTCACATATAGTGGATGAAGCTTTTGTGACAGAAAGCACTCAATaGTCCCAAGAAAATGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: LFVFLLKIVSHIVDEAFVTESTQ*SQENER Trigger: TCTTTCATTTTCTTGGGAGCATTGAGTGCTTTCTGT...CACAAAAGCTTCATCCACTATATGTGAGACAATCTTAAGCAGAAAGACAAAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| 3UTR CAA 72 bp | AAGCTCACTCTCTATGCTAAGGATATATCAGCAAAATaGATAATGGCAAGATCAATGCTATATCACACAAGT | + |
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Preference number: 4 (lower is better) Translates to: KLTLYAKDISAK*IMARSMLYHTS Trigger: ACTTGTGTGATATAGCATTGATCTTGCCATTATCAATTTTGCTGATATATCCTTAGCATAGAGAGTGAGCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR CAA 90 bp | CTGGCTGACCTGCCAGAGTCTGGCTCCAACTGTCGGGCACCACAGACACCACTGCAAGTTCATCAGAATTaGCACGACAGTTCCCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: LADLPESGSNCRAPQTPLQVHQN*HDSSQH Trigger: ATGCTGGGAACTGTCGTGCAAATTCTGATGAACTTG...CAGTGGTGTCTGTGGTGCCCGACAGTTGGAGCCAGACTCTGGCAGGTCAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR CAA 90 bp | GTGATAGTCTGGCTAGCTCAGGCAGCTAGCTCAGCAGGCTGCTTGGTTAGACTGCAAGTTCATCAGAATTaGCACGACAGTTCCCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: VIVWLAQAASSAGCLVRLQVHQN*HDSSQH Trigger: ATGCTGGGAACTGTCGTGCAAATTCTGATGAACTTG...CAGTCTAACCAAGCAGCCTGCTGAGCTAGCTGCCTGAGCTAGCCAGACTATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS-3UTR CAA 90 bp | TGGTTAGACTGGTGGCCATGGCTGGAGCACAAGAAGATTTCCTTGGCAGGAGGTTCAAAGGGTTCAGCATaGGACCTACCAAGTTCATCA | + |
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Preference number: 5 (lower is better) Translates to: WLDWWPWLEHKKISLAGGSKGSA*DLPSSS Trigger: TGATGAACTTGGTAGGTCCAATGCTGAACCCTTTGA...ACCTCCTGCCAAGGAAATCTTCTTGTGCTCCAGCCATGGCCACCAGTCTAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS TCA 90 bp | CACGCTGACGCCCCTCAGTTGACTGAATACTCAAGATGGAGATTGTaGTTCGTGTATAGGACAGAAGGATCAGGAGAAAGCAGACAAGGG | + |
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Preference number: 5 (lower is better) Translates to: HADAPQLTEYSRWRL*FVYRTEGSGESRQG Trigger: CCCTTGTCTGCTTTCTCCTGATCCTTCTGTCCTATACACGAATCACAATCTCCATCTTGAGTATTCAGTCAACTGAGGGGCGTCAGCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062545.3 ENSMUST00000215505.2 ENSMUST00000217227.2 |
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| CDS CAA 72 bp | AGGGTTCAGCATTGGACCTACCAAGTTCATCAGAATTaGCACGACAGTTCCCAGCATGGGGTTTGGTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: RVQHWTYQVHQN*HDSSQHGVWCR Trigger: CCTACACCAAACCCCATGCTGGGAACTGTCGTGCAAATTCTGATGAACTTGGTAGGTCCAATGCTGAACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062545.3 ENSMUST00000215505.2 ENSMUST00000217227.2 |
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