Pregenerated sensors for OLFR955 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000063176

Ensembl transcript IDs: ENSMUST00000073946.2, ENSMUST00000220176.2

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR TCA 90 bp	CAGAGAATAATATTTCTCCATGGATCTGCATCTGAGAATCCTCTTCTATTTTGGCTTGGTCCATGGAGCTaGCTGAAGATGGTTGTAGAT	+
Preference number: 4 (lower is better) Translates to: QRIIFLHGSASENPLLFWLGPWS*LKMVVD Trigger: ATCTACAACCATCTTCAGTCAGCTCCATGGACCAAG...CCAAAATAGAAGAGGATTCTCAGATGCAGATCCATGGAGAAATATTATTCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220176.2
CDS-3UTR CCA 90 bp	TGTTATCAAATGCTTGTTATAGACTATATCCTGCTGTACACTGCAGTAATTTCCAGACTTGATAGGACATaGTTACTTTGTAAAGCAAAG	+
Preference number: 4 (lower is better) Translates to: CYQMLVIDYILLYTAVISRLDRT*LLCKAK Trigger: CTTTGCTTTACAAAGTAACCATGTCCTATCAAGTCT...GGAAATTACTGCAGTGTACAGCAGGATATAGTCTATAACAAGCATTTGATAACA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220176.2
CDS TCA 90 bp	TACAGAAAAACAATCTTAGCAGGAAGACTGTGTGAGCTGTGGCACTaGTTAAGCCAATACCATACACCACAGCTACCATCAACAAACAGA	+
Preference number: 5 (lower is better) Translates to: YRKTILAGRLCELWH*LSQYHTPQLPSTNR Trigger: TCTGTTTGTTGATGGTAGCTGTGGTGTATGGTATTGGCTTAATCAGTGCCACAGCTCACACAGTCTTCCTGCTAAGATTGTTTTTCTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073946.2 ENSMUST00000220176.2
CDS TCA 90 bp	ATTTTATCAGCCTTACAGAAAAACAATCTTAGCAGGAAGACTGTGTaGGCTGTGGCACTGATTAAGCCAATACCATACACCACAGCTACC	+
Preference number: 5 (lower is better) Translates to: ILSALQKNNLSRKTV*AVALIKPIPYTTAT Trigger: GGTAGCTGTGGTGTATGGTATTGGCTTAATCAGTGCCACAGCTCACACAGTCTTCCTGCTAAGATTGTTTTTCTGTAAGGCTGATAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073946.2 ENSMUST00000220176.2
CDS-3UTR CAA 90 bp	TGTTATCAAATGCTTGTTATAGACTATATCCTGCTGTACACTGCAGTAATTTCCCATCAACAAACAGACTaGATAGGACATGGTTACTTT	+
Preference number: 5 (lower is better) Translates to: CYQMLVIDYILLYTAVISHQQTD*IGHGYF Trigger: AAAGTAACCATGTCCTATCAAGTCTGTTTGTTGATG...GGAAATTACTGCAGTGTACAGCAGGATATAGTCTATAACAAGCATTTGATAACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220176.2
CDS TCA 72 bp	ACAATCTTAGCAGGAAGACTGTGTGAGCTGTGGCACTaGTTAAGCCAATACCATACACCACAGCTACCATCA	+
Preference number: 6 (lower is better) Translates to: TILAGRLCELWH*LSQYHTPQLPS Trigger: TGATGGTAGCTGTGGTGTATGGTATTGGCTTAATCAGTGCCACAGCTCACACAGTCTTCCTGCTAAGATTGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073946.2 ENSMUST00000220176.2
CDS TCA 72 bp	GCCTTACAGAAAAACAATCTTAGCAGGAAGACTGTGTaGGCTGTGGCACTGATTAAGCCAATACCATACACC	+
Preference number: 6 (lower is better) Translates to: ALQKNNLSRKTV*AVALIKPIPYT Trigger: GGTGTATGGTATTGGCTTAATCAGTGCCACAGCTCACACAGTCTTCCTGCTAAGATTGTTTTTCTGTAAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073946.2 ENSMUST00000220176.2

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