Pregenerated sensors for OLFR954 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094745Ensembl transcript IDs: ENSMUST00000214818.3
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAACCCACACACCAGCTAGGTGCTGTCCAGAGTCCACAGGCCCCTaGCTCCATTCTCTGCTCTTCCCCAATTCCCAGAATTGCCTAAAT | + |
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Preference number: 1 (lower is better) Translates to: PTHTPARCCPESTGP*LHSLLFPNSQNCLN Trigger: ATTTAGGCAATTCTGGGAATTGGGGAAGAGCAGAGAATGGAGTCAGGGGCCTGTGGACTCTGGACAGCACCTAGCTGGTGTGTGGGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR CCA 90 bp | TACGAGGGCCATTTTTACAATGTTAATCCTACTGATGCATGGGCATaGGAGATCTTTCCATCTTCTGAGGTCTTCAATTTCTTTCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: YEGHFYNVNPTDAWA*EIFPSSEVFNFFLQ Trigger: CTGAAGAAAGAAATTGAAGACCTCAGAAGATGGAAAGATCTCCCATGCCCATGCATCAGTAGGATTAACATTGTAAAAATGGCCCTCGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR CCA 90 bp | TTTTGGTACGAGGGCCATTTTTACAATGTTAATCCTACTGATGCATaGGCATGGGAGATCTTTCCATCTTCTGAGGTCTTCAATTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: FWYEGHFYNVNPTDA*AWEIFPSSEVFNFF Trigger: AAAGAAATTGAAGACCTCAGAAGATGGAAAGATCTCCCATGCCCATGCATCAGTAGGATTAACATTGTAAAAATGGCCCTCGTACCAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR GCA 90 bp | AACCCTGCTCACCAACCCACACACCAGCTAGGTGCTGTCCAGAGTCCACAGGCCCTCCCCAAGAGGTCATaGCCAGTGGCTGAGCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: NPAHQPTHQLGAVQSPQALPKRS*PVAEQA Trigger: TGCCTGCTCAGCCACTGGGCATGACCTCTTGGGGAG...GGCCTGTGGACTCTGGACAGCACCTAGCTGGTGTGTGGGTTGGTGAGCAGGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR GCA 90 bp | AACCCTGCTCACCAACCCACACACCAGCTAGGTGCTGTCCAGAGTCCACAGGCCCAGCCCTGGCCTTATTaGAGGCCTTGGGACACACCC | + |
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Preference number: 2 (lower is better) Translates to: NPAHQPTHQLGAVQSPQAQPWPY*RPWDTP Trigger: GGGTGTGTCCCAAGGCCTGCAATAAGGCCAGGGCTG...GGCCTGTGGACTCTGGACAGCACCTAGCTGGTGTGTGGGTTGGTGAGCAGGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR CCA 90 bp | AACCCTGCTCACCAACCCACACACCAGCTAGGTGCTGTCCAGAGTCCACAGGCCTTCATTTTCCCACCCTaGAAAAGTGTCTTAGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: NPAHQPTHQLGAVQSPQAFIFPP*KSVLVL Trigger: AAGCACTAAGACACTTTTCCAGGGTGGGAAAATGAA...GGCCTGTGGACTCTGGACAGCACCTAGCTGGTGTGTGGGTTGGTGAGCAGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR GCA 90 bp | AACAAACCCTGCTCACCAACCCACACACCAGCTAGGTGCTGTCCAGAGTCCACACCCAATTCCCAGAATTaGCTAAATGTCCAAGAGTTA | + |
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Preference number: 2 (lower is better) Translates to: NKPCSPTHTPARCCPESTPNSQN*LNVQEL Trigger: TAACTCTTGGACATTTAGGCAATTCTGGGAATTGGG...TGTGGACTCTGGACAGCACCTAGCTGGTGTGTGGGTTGGTGAGCAGGGTTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR CCA 90 bp | CCTAAATGTCCAAGAGTTAGAGCACCCCACAGCCCTGGCCTTATTGCAGGCCTTAAAACAAAACAGCCCTaGCATTCCCACAAGTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: PKCPRVRAPHSPGLIAGLKTKQP*HSHKSE Trigger: TTCTGACTTGTGGGAATGCCAGGGCTGTTTTGTTTT...AAGGCCTGCAATAAGGCCAGGGCTGTGGGGTGCTCTAACTCTTGGACATTTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR TCA 90 bp | AACAAACCCTGCTCACCAACCCACACACCAGCTAGGTGCTGTCCAGAGTCCACATGTAGTTTGAGAAGGTaGTTCTCCCAGAATTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: NKPCSPTHTPARCCPESTCSLRR*FSQNFF Trigger: AAAGAAATTCTGGGAGAATCACCTTCTCAAACTACA...TGTGGACTCTGGACAGCACCTAGCTGGTGTGTGGGTTGGTGAGCAGGGTTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR TCA 90 bp | TTCCCCAATTCCCAGAATTGCCTAAATGTCCAAGAGTTAGAGCACCCCACAGCCTGTTGCTCTGTAGTTTaGGAAGGTGATTCTCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: FPNSQNCLNVQELEHPTACCSVV*EGDSPR Trigger: TCTGGGAGAATCACCTTCTCAAACTACAGAGCAACA...GGCTGTGGGGTGCTCTAACTCTTGGACATTTAGGCAATTCTGGGAATTGGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR CCA 90 bp | TCTGCTCTTCCCCAATTCCCAGAATTGCCTAAATGTCCAAGAGTTAGAGCACCCACTGATGCATGGGCATaGGAGATCTTTCCATCTTCT | + |
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Preference number: 2 (lower is better) Translates to: SALPQFPELPKCPRVRAPTDAWA*EIFPSS Trigger: AGAAGATGGAAAGATCTCCCATGCCCATGCATCAGT...GGGTGCTCTAACTCTTGGACATTTAGGCAATTCTGGGAATTGGGGAAGAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR TCA 90 bp | TCTGCTCTTCCCCAATTCCCAGAATTGCCTAAATGTCCAAGAGTTAGAGCACCCTGTCCCTTGAATTCCTaGCCTTTCCAAGGCTTTTTA | + |
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Preference number: 2 (lower is better) Translates to: SALPQFPELPKCPRVRAPCPLNS*PFQGFL Trigger: TAAAAAGCCTTGGAAAGGTCAGGAATTCAAGGGACA...GGGTGCTCTAACTCTTGGACATTTAGGCAATTCTGGGAATTGGGGAAGAGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR TCA 90 bp | GAATTGCCTAAATGTCCAAGAGTTAGAGCACCCCACAGCCCTGGCCTTATTGCATCAATTCTATTCCATTaGTCTACCTGTTTGTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: ELPKCPRVRAPHSPGLIASILFH*STCLSL Trigger: CAGAGACAAACAGGTAGATCAATGGAATAGAATTGA...TGCAATAAGGCCAGGGCTGTGGGGTGCTCTAACTCTTGGACATTTAGGCAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR CCA 90 bp | TCTGCTCTTCCCCAATTCCCAGAATTGCCTAAATGTCCAAGAGTTAGAGCACCCTCTGTAGATTCCTTTTaGTACGAGGGCCATTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: SALPQFPELPKCPRVRAPSVDSF*YEGHFY Trigger: GTAAAAATGGCCCTCGTACCAAAAGGAATCTACAGA...GGGTGCTCTAACTCTTGGACATTTAGGCAATTCTGGGAATTGGGGAAGAGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR CAA 90 bp | CATCTTCTGAGGTCTTCAATTTCTTTCTTCAGAGACTTGAAGTTCTaGTCATATGAATCTTTCACTTGCTTGGTTAGAGTTACACCAAGA | + |
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Preference number: 2 (lower is better) Translates to: HLLRSSISFFRDLKF*SYESFTCLVRVTPR Trigger: TCTTGGTGTAACTCTAACCAAGCAAGTGAAAGATTCATATGACAAGAACTTCAAGTCTCTGAAGAAAGAAATTGAAGACCTCAGAAGATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGAGGTCTTCAATTTCTTTCTTCAGAGACTTGAAGTTCTTGTCATATGAATTTAAGTATGTCCCTTaGATTCCTGACCTTTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: LLRSSISFFRDLKFLSYEFKYVP*IPDLSK Trigger: CTTGGAAAGGTCAGGAATTCAAGGGACATACTTAAA...TTCATATGACAAGAACTTCAAGTCTCTGAAGAAAGAAATTGAAGACCTCAGAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR CAA 90 bp | GGGTTGCTTATATATACTATTATATCATCTGCAAATAGTGATACCTaGACTTCTTCCTTTCTGATTTGTGTCCCTATGATGCCCTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: GLLIYTIISSANSDT*TSSFLICVPMMPFC Trigger: ACAAAAGGGCATCATAGGGACACAAATCAGAAAGGAAGAAGTCAAGGTATCACTATTTGCAGATGATATAATAGTATATATAAGCAACCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR CAA 90 bp | AGATCTTTCCATCTTCTGAGGTCTTCAATTTCTTTCTTCAGAGACTaGAAGTTCTTGTCATATGAATCTTTCACTTGCTTGGTTAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: RSFHLLRSSISFFRD*KFLSYESFTCLVRV Trigger: AACTCTAACCAAGCAAGTGAAAGATTCATATGACAAGAACTTCAAGTCTCTGAAGAAAGAAATTGAAGACCTCAGAAGATGGAAAGATCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR GCA 90 bp | ATAATGAAGGGTGACATGTCCATAATTTCATTCTCAGTCCTTTTATCCTTTGTGCCTTTTGTTTGCTATTaGTCGACCTTCAAGTACTAT | + |
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Preference number: 2 (lower is better) Translates to: IMKGDMSIISFSVLLSFVPFVCY*STFKYY Trigger: ATAGTACTTGAAGGTCGAGCAATAGCAAACAAAAGG...CACAAAGGATAAAAGGACTGAGAATGAAATTATGGACATGTCACCCTTCATTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR CCA 90 bp | ATAATGAAGGGTGACATGTCCATAATTTCATTCTCAGTCCTTTTATCCTTTGTGTTTGATGTTGGGTATTaGTTTGCTGTATCTTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: IMKGDMSIISFSVLLSFVFDVGY*FAVSCF Trigger: AAAGCAAGATACAGCAAACCAATACCCAACATCAAA...CACAAAGGATAAAAGGACTGAGAATGAAATTATGGACATGTCACCCTTCATTAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR CAA 90 bp | TTCCCCAATTCCCAGAATTGCCTAAATGTCCAAGAGTTAGAGCACCCCACAGCCGCCTTATTGCAGGCCTaGGGACACACCCCCTGCCCC | + |
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Preference number: 3 (lower is better) Translates to: FPNSQNCLNVQELEHPTAALLQA*GHTPCP Trigger: GGGGCAGGGGGTGTGTCCCAAGGCCTGCAATAAGGC...GGCTGTGGGGTGCTCTAACTCTTGGACATTTAGGCAATTCTGGGAATTGGGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR TCA 72 bp | TCCCCAAGAGGTCATGCCCAGTGGCTGAGCAGGCACTaGCTGACACCCTCTATAGGATGTAGGGTTGGTAAA | + |
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Preference number: 3 (lower is better) Translates to: SPRGHAQWLSRH*LTPSIGCRVGK Trigger: TTTACCAACCCTACATCCTATAGAGGGTGTCAGTCAGTGCCTGCTCAGCCACTGGGCATGACCTCTTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR CAA 90 bp | AACCCTGCTCACCAACCCACACACCAGCTAGGTGCTGTCCAGAGTCCACAGGCCCTTCCACACTATTTGTaGATTTTGCTGGTTATGAGA | + |
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Preference number: 3 (lower is better) Translates to: NPAHQPTHQLGAVQSPQALPHYL*ILLVMR Trigger: TCTCATAACCAGCAAAATCAACAAATAGTGTGGAAG...GGCCTGTGGACTCTGGACAGCACCTAGCTGGTGTGTGGGTTGGTGAGCAGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR CAA 90 bp | AACCCTGCTCACCAACCCACACACCAGCTAGGTGCTGTCCAGAGTCCACAGGCCTTCCAATGGGTAGTTTaGGATTCTTTGTCAAAGATC | + |
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Preference number: 3 (lower is better) Translates to: NPAHQPTHQLGAVQSPQAFQWVV*DSLSKI Trigger: GATCTTTGACAAAGAATCCAAAACTACCCATTGGAA...GGCCTGTGGACTCTGGACAGCACCTAGCTGGTGTGTGGGTTGGTGAGCAGGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR CAA 90 bp | CCTAAATGTCCAAGAGTTAGAGCACCCCACAGCCCTGGCCTTATTGCAGGCCTTTGGCATTTTGTTCTGTaGACAGTGTCCTTTGCTTAC | + |
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Preference number: 3 (lower is better) Translates to: PKCPRVRAPHSPGLIAGLWHFVL*TVSFAY Trigger: GTAAGCAAAGGACACTGTCAACAGAACAAAATGCCA...AAGGCCTGCAATAAGGCCAGGGCTGTGGGGTGCTCTAACTCTTGGACATTTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR CCA 72 bp | GAGGGCCATTTTTACAATGTTAATCCTACTGATGCATaGGCATGGGAGATCTTTCCATCTTCTGAGGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: EGHFYNVNPTDA*AWEIFPSSEVF Trigger: GAAGACCTCAGAAGATGGAAAGATCTCCCATGCCCATGCATCAGTAGGATTAACATTGTAAAAATGGCCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR CAA 90 bp | TCTGCTCTTCCCCAATTCCCAGAATTGCCTAAATGTCCAAGAGTTAGAGCACCCGCAAATAGTGATACCTaGACTTCTTCCTTTCTGATT | + |
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Preference number: 3 (lower is better) Translates to: SALPQFPELPKCPRVRAPANSDT*TSSFLI Trigger: AATCAGAAAGGAAGAAGTCAAGGTATCACTATTTGC...GGGTGCTCTAACTCTTGGACATTTAGGCAATTCTGGGAATTGGGGAAGAGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR CAA 90 bp | TCTGCTCTTCCCCAATTCCCAGAATTGCCTAAATGTCCAAGAGTTAGAGCACCCTATCCCTATAAAGAATaGAGCTGGAATTTTGATGGG | + |
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Preference number: 3 (lower is better) Translates to: SALPQFPELPKCPRVRAPYPYKE*SWNFDG Trigger: CCCATCAAAATTCCAGCTCAATTCTTTATAGGGATA...GGGTGCTCTAACTCTTGGACATTTAGGCAATTCTGGGAATTGGGGAAGAGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR CAA 90 bp | CTTCTGAGGTCTTCAATTTCTTTCTTCAGAGACTTGAAGTTCTTGTCATATGAACAGTCCTTTTATCCTTaGTGTAGAGGAACACTACTG | + |
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Preference number: 3 (lower is better) Translates to: LLRSSISFFRDLKFLSYEQSFYP*CRGTLL Trigger: CAGTAGTGTTCCTCTACACAAAGGATAAAAGGACTG...TTCATATGACAAGAACTTCAAGTCTCTGAAGAAAGAAATTGAAGACCTCAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR-3UTR CAA 90 bp | CTTCTGAGGTCTTCAATTTCTTTCTTCAGAGACTTGAAGTTCTTGTCATATGAATTATATCCAGATACCTaGCTAAAGTTGCTTATCAGC | + |
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Preference number: 3 (lower is better) Translates to: LLRSSISFFRDLKFLSYELYPDT*LKLLIS Trigger: GCTGATAAGCAACTTTAGCAAGGTATCTGGATATAA...TTCATATGACAAGAACTTCAAGTCTCTGAAGAAAGAAATTGAAGACCTCAGAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR CCA 72 bp | TTTGATGGGAATTGTATTGAGTCTGTAGATTCCTTTTaGTACGAGGGCCATTTTTACAATGTTAATCCTACT | + |
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Preference number: 3 (lower is better) Translates to: FDGNCIESVDSF*YEGHFYNVNPT Trigger: AGTAGGATTAACATTGTAAAAATGGCCCTCGTACCAAAAGGAATCTACAGACTCAATACAATTCCCATCAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR TCA 72 bp | CCATTGATCTACCTGTTTGTCTCTGTACAAATATTATaGGATTTTCAATCACTGTTGCTCTGTAGTTTGAGA | + |
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Preference number: 3 (lower is better) Translates to: PLIYLFVSVQIL*DFQSLLLCSLR Trigger: TCTCAAACTACAGAGCAACAGTGATTGAAAATCTCATAATATTTGTACAGAGACAAACAGGTAGATCAATGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| CDS-3UTR CCA 90 bp | AACAAACCCTGCTCACCAACCCACACACCAGCTAGGTGCTGTCCAGAGTCCACAGCAACAGCAGAGATGTaGGAACTGCAAGTACTAAAG | + |
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Preference number: 4 (lower is better) Translates to: NKPCSPTHTPARCCPESTATAEM*ELQVLK Trigger: CTTTAGTACTTGCAGTTCCCACATCTCTGCTGTTGC...TGTGGACTCTGGACAGCACCTAGCTGGTGTGTGGGTTGGTGAGCAGGGTTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR CAA 72 bp | CTGACTCCATTCTCTGCTCTTCCCCAATTCCCAGAATaGCCTAAATGTCCAAGAGTTAGAGCACCCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: LTPFSALPQFPE*PKCPRVRAPHS Trigger: GCTGTGGGGTGCTCTAACTCTTGGACATTTAGGCAATTCTGGGAATTGGGGAAGAGCAGAGAATGGAGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| CDS-3UTR TCA 90 bp | CCTAAATGTCCAAGAGTTAGAGCACCCCACAGCCCTGGCCTTATTGCAGGCCTTGTGGTTGATTACATCTaGTTTGCAGAACTGGATCCT | + |
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Preference number: 4 (lower is better) Translates to: PKCPRVRAPHSPGLIAGLVVDYI*FAELDP Trigger: AGGATCCAGTTCTGCAAATCAGATGTAATCAACCAC...AAGGCCTGCAATAAGGCCAGGGCTGTGGGGTGCTCTAACTCTTGGACATTTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| CDS-3UTR GCA 90 bp | AACAAACCCTGCTCACCAACCCACACACCAGCTAGGTGCTGTCCAGAGTCCACAATATGTATTAGAGCATaGAAGTTTCAAGAGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: NKPCSPTHTPARCCPESTICIRA*KFQEGK Trigger: CTTCCCCTCTTGAAACTTGCATGCTCTAATACATAT...TGTGGACTCTGGACAGCACCTAGCTGGTGTGTGGGTTGGTGAGCAGGGTTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| CDS-3UTR TCA 90 bp | CTTCTGAGGTCTTCAATTTCTTTCTTCAGAGACTTGAAGTTCTTGTCATATGAACTGCTGTGCCAAAAATaGTGGCAAAGTAGAGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LLRSSISFFRDLKFLSYELLCQK*WQSRAE Trigger: CTCAGCTCTACTTTGCCATCATTTTTGGCACAGCAG...TTCATATGACAAGAACTTCAAGTCTCTGAAGAAAGAAATTGAAGACCTCAGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| CDS-3UTR TCA 90 bp | ATAATGAAGGGTGACATGTCCATAATTTCATTCTCAGTCCTTTTATCCTTTGTGCACAGAAATAGTGGTTaGTTACATCTGATTTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: IMKGDMSIISFSVLLSFVHRNSG*LHLICR Trigger: TCTGCAAATCAGATGTAATCAACCACTATTTCTGTG...CACAAAGGATAAAAGGACTGAGAATGAAATTATGGACATGTCACCCTTCATTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR CAA 72 bp | CATCTTCTGAGGTCTTCAATTTCTTTCTTCAGAGACTaGAAGTTCTTGTCATATGAATCTTTCACTTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: HLLRSSISFFRD*KFLSYESFTCL Trigger: CAAGCAAGTGAAAGATTCATATGACAAGAACTTCAAGTCTCTGAAGAAAGAAATTGAAGACCTCAGAAGATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| 3UTR CAA 72 bp | AGGTCTTCAATTTCTTTCTTCAGAGACTTGAAGTTCTaGTCATATGAATCTTTCACTTGCTTGGTTAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: RSSISFFRDLKF*SYESFTCLVRV Trigger: AACTCTAACCAAGCAAGTGAAAGATTCATATGACAAGAACTTCAAGTCTCTGAAGAAAGAAATTGAAGACCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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| CDS-3UTR CAA 90 bp | GTGTATCATGTTAGACAATCCAGTATGGGCATAAGGATTTATATCTTCCACACTTTGATTACATCTGATTaGCAGAACTGGATCCTAAAC | + |
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Preference number: 5 (lower is better) Translates to: VYHVRQSSMGIRIYIFHTLITSD*QNWILN Trigger: GTTTAGGATCCAGTTCTGCAAATCAGATGTAATCAA...AGTGTGGAAGATATAAATCCTTATGCCCATACTGGATTGTCTAACATGATACAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214818.3 |
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