Pregenerated sensors for OLFR95 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049561Ensembl transcript IDs: ENSMUST00000060728.7, ENSMUST00000216318.2
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTGACACACCAGAAGAGGGTGTCAGATCTCATTACTGGTGGCTGTaGGCCACCATGTGGTTGTTGGGATTTGAACTCAGGACCTTTGGA | + |
|
Preference number: 1 (lower is better) Translates to: SDTPEEGVRSHYWWL*ATMWLLGFELRTFG Trigger: TCCAAAGGTCCTGAGTTCAAATCCCAACAACCACATGGTGGCTCACAGCCACCAGTAATGAGATCTGACACCCTCTTCTGGTGTGTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR CCA 90 bp | GAGACTCTTATTTCTTTGGACAGGGTTTTATTCTGTAGCCCTGACTaGCCTGGAACTTGCAGTAGTCCTCCTGCCTCAGCCTCCAAAGCA | + |
|
Preference number: 1 (lower is better) Translates to: ETLISLDRVLFCSPD*PGTCSSPPASASKA Trigger: TGCTTTGGAGGCTGAGGCAGGAGGACTACTGCAAGTTCCAGGCCAGTCAGGGCTACAGAATAAAACCCTGTCCAAAGAAATAAGAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR TCA 90 bp | AGCTCCTCTGTGATGTCCTTCCTCTCTGTAGATGTTCTACTGCTATaGGATACCCAGGGTACTGAGGCTTTAATCACTGGTAAGATGGGG | + |
|
Preference number: 1 (lower is better) Translates to: SSSVMSFLSVDVLLL*DTQGTEALITGKMG Trigger: CCCCATCTTACCAGTGATTAAAGCCTCAGTACCCTGGGTATCTCATAGCAGTAGAACATCTACAGAGAGGAAGGACATCACAGAGGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR CCA 90 bp | GAATTCAAGCCAGGTGTGGTGGCATACATCTATAATCTCAACACTTaGGAGGCAGAGGTGGGGAATCAGGAGTTTAAGGCCAGGTTAGTT | + |
|
Preference number: 1 (lower is better) Translates to: EFKPGVVAYIYNLNT*EAEVGNQEFKARLV Trigger: AACTAACCTGGCCTTAAACTCCTGATTCCCCACCTCTGCCTCCCAAGTGTTGAGATTATAGATGTATGCCACCACACCTGGCTTGAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR CCA 90 bp | CCTCTTCCTCTTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCTATaGATCTACTTATGTGTGCTAGCTATATATAACTGTATACTAATA | + |
|
Preference number: 1 (lower is better) Translates to: PLPLPPPLPPPPPPL*IYLCVLAIYNCILI Trigger: TATTAGTATACAGTTATATATAGCTAGCACACATAAGTAGATCCATAGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAAGAGGAAGAGG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR GCA 90 bp | CTGTGTATAATACAGCCTGTTTACTCTCCCGCTCATCATGCCTTATaGATTTTAATTATTAGGAATCATTGGTGTCCTCTTGATCCCCGG | + |
|
Preference number: 1 (lower is better) Translates to: LCIIQPVYSPAHHAL*ILIIRNHWCPLDPR Trigger: CCGGGGATCAAGAGGACACCAATGATTCCTAATAATTAAAATGCATAAGGCATGATGAGCGGGAGAGTAAACAGGCTGTATTATACACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR CCA 90 bp | ACTCAGGTTTCACAGTGTCAAGCAGAGCAACAAGCGCACAGAAGATaGCGAATGGGTGTCAGGAATGATAAAAATCATGTGGATTTTATT | + |
|
Preference number: 1 (lower is better) Translates to: TQVSQCQAEQQAHRR*RMGVRNDKNHVDFI Trigger: AATAAAATCCACATGATTTTTATCATTCCTGACACCCATTCGCCATCTTCTGTGCGCTTGTTGCTCTGCTTGACACTGTGAAACCTGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR TCA 90 bp | GTCTCAATGCCAGATAACGTTCAGGACTATTGCTCTGTATATAGGTaGAAATTTTATCACCTCCATAGTCGTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 1 (lower is better) Translates to: VSMPDNVQDYCSVYR*KFYHLHSRVCVCVC Trigger: ACACACACACACACACACACGACTATGGAGGTGATAAAATTTTCACCTATATACAGAGCAATAGTCCTGAACGTTATCTGGCATTGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR TCA 90 bp | GTAGATGGAGGGGACCAGGAGGTGGATATGTTGCATTTTCAATGTTCAGTTCTGCTTGGTTTGTTTCACTaGTGCAGGGGGCGGCGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: VDGGDQEVDMLHFQCSVLLGLFH*CRGRRG Trigger: CCCCCGCCGCCCCCTGCATCAGTGAAACAAACCAAG...CAGAACTGAACATTGAAAATGCAACATATCCACCTCCTGGTCCCCTCCATCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR CAA 90 bp | TGCAGTAGTCCTCCTGCCTCAGCCTCCAAAGCATTGGGTTGTGGATaGCACCACCAGAACTTTTCATTATTAACTGTCTCCCGCGGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: CSSPPASASKALGCG*HHQNFSLLTVSRGL Trigger: GAGCCCGCGGGAGACAGTTAATAATGAAAAGTTCTGGTGGTGCAATCCACAACCCAATGCTTTGGAGGCTGAGGCAGGAGGACTACTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTTTGGGAATTGAGGCCAGGGCCTTGGGCTTACTAGGGGAGTACTTTACCACTTCATTGGTGTCCTCTTaGTCCCCGGGGAGACTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: VLGIEARALGLLGEYFTTSLVSS*SPGRLL Trigger: TAAGAGTCTCCCCGGGGATCAAGAGGACACCAATGA...AGTGGTAAAGTACTCCCCTAGTAAGCCCAAGGCCCTGGCCTCAATTCCCAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAGTAGGGTGTGGTGGCTTTGCCTTTAATCTCAGAACTCAGAAATTGCTAGTGCTTGGTTTGTTTCACTaGTGCAGGGGGCGGCGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: LVGCGGFAFNLRTQKLLVLGLFH*CRGRRG Trigger: CCCCCGCCGCCCCCTGCATCAGTGAAACAAACCAAG...CACTAGCAATTTCTGAGTTCTGAGATTAAAGGCAAAGCCACCACACCCTACTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGGGTACTGAGGCTTTAATCACTGGTAAGATGGGGGAGGTCATGTCATCTTCCATCGCCATCCCGTGTTaGCTCAGGTTTCACAGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: QGTEALITGKMGEVMSSSIAIPC*LRFHSV Trigger: GACACTGTGAAACCTGAGTCAACACGGGATGGCGAT...GGAAGATGACATGACCTCCCCCATCTTACCAGTGATTAAAGCCTCAGTACCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR CAA 90 bp | GATCTCATTACTGGTGGCTGTGAGCCACCATGTGGTTGTTGGGATTaGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTACCCACT | + |
|
Preference number: 2 (lower is better) Translates to: DLITGGCEPPCGCWD*NSGPLEEQSVLLPT Trigger: AGTGGGTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAACAACCACATGGTGGCTCACAGCCACCAGTAATGAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTTTGGGAATTGAGGCCAGGGCCTTGGGCTTACTAGGGGAGTACTTTACCACTAATGAGTTTGACACCTaGCAGAGCTCTAGCAGACTC | + |
|
Preference number: 2 (lower is better) Translates to: VLGIEARALGLLGEYFTTNEFDT*QSSSRL Trigger: GAGTCTGCTAGAGCTCTGGCAGGTGTCAAACTCATT...AGTGGTAAAGTACTCCCCTAGTAAGCCCAAGGCCCTGGCCTCAATTCCCAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTTCTCTCCAGACAAAGACGGCACAAAATCGCCATCCCGTGTTGACTCAGGTTCTTGGGAGGCAGAGGTaGGGAATCAGGAGTTTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: FSLQTKTAQNRHPVLTQVLGRQR*GIRSLR Trigger: CCTTAAACTCCTGATTCCCCACCTCTGCCTCCCAAG...AACCTGAGTCAACACGGGATGGCGATTTTGTGCCGTCTTTGTCTGGAGAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGTCAGGCTTCACTCTGGCTATAAGAATTCCAATGATCAGAGGAGGAGCATGCAGCCTCCAAAGCATTaGGTTGTGGATTGCACCACC | + |
|
Preference number: 2 (lower is better) Translates to: AVRLHSGYKNSNDQRRSMQPPKH*VVDCTT Trigger: GGTGGTGCAATCCACAACCCAATGCTTTGGAGGCTG...CATGCTCCTCCTCTGATCATTGGAATTCTTATAGCCAGAGTGAAGCCTGACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR CAA 90 bp | TGGCCTGGAACTTGCAGTAGTCCTCCTGCCTCAGCCTCCAAAGCATaGGGTTGTGGATTGCACCACCAGAACTTTTCATTATTAACTGTC | + |
|
Preference number: 2 (lower is better) Translates to: WPGTCSSPPASASKA*GCGLHHQNFSLLTV Trigger: GACAGTTAATAATGAAAAGTTCTGGTGGTGCAATCCACAACCCAATGCTTTGGAGGCTGAGGCAGGAGGACTACTGCAAGTTCCAGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CCA 90 bp | CATGCTGCAAATCCTTCAGGTAGCTCCTCTGTGATGTCCTTCCTCTCTGTAGATCACTGCCACCACCTCTaGGCCAATTTACTTTGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: HAANPSGSSSVMSFLSVDHCHHL*ANLLWQ Trigger: TTGCCAAAGTAAATTGGCCCAGAGGTGGTGGCAGTG...ATCTACAGAGAGGAAGGACATCACAGAGGAGCTACCTGAAGGATTTGCAGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTTCTCTCCAGACAAAGACGGCACAAAATCGCCATCCCGTGTTGACTCAGGTTAATGAGTTTGACACCTaGCAGAGCTCTAGCAGACTC | + |
|
Preference number: 2 (lower is better) Translates to: FSLQTKTAQNRHPVLTQVNEFDT*QSSSRL Trigger: GAGTCTGCTAGAGCTCTGGCAGGTGTCAAACTCATT...AACCTGAGTCAACACGGGATGGCGATTTTGTGCCGTCTTTGTCTGGAGAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTTTGGGAATTGAGGCCAGGGCCTTGGGCTTACTAGGGGAGTACTTTACCACTGACAGAATAGATGAGTaGATGTTGAGGGAGTCAATA | + |
|
Preference number: 2 (lower is better) Translates to: VLGIEARALGLLGEYFTTDRIDE*MLRESI Trigger: TATTGACTCCCTCAACATTCACTCATCTATTCTGTC...AGTGGTAAAGTACTCCCCTAGTAAGCCCAAGGCCCTGGCCTCAATTCCCAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAGTAGGGTGTGGTGGCTTTGCCTTTAATCTCAGAACTCAGAAATTGCTAGTGCTTGGGAGGCAGAGGTaGGGAATCAGGAGTTTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: LVGCGGFAFNLRTQKLLVLGRQR*GIRSLR Trigger: CCTTAAACTCCTGATTCCCCACCTCTGCCTCCCAAG...CACTAGCAATTTCTGAGTTCTGAGATTAAAGGCAAAGCCACCACACCCTACTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGTCAGGCTTCACTCTGGCTATAAGAATTCCAATGATCAGAGGAGGAGCATGGATACCCATGTAGCATaGGTTTTCACAAGCTCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: AVRLHSGYKNSNDQRRSMDTHVA*VFTSSQ Trigger: CTGAGAGCTTGTGAAAACCCATGCTACATGGGTATC...CATGCTCCTCCTCTGATCATTGGAATTCTTATAGCCAGAGTGAAGCCTGACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTTAGTTTTGGGAATTGAGGCCAGGGCCTTGGGCTTACTAGGGGAGTACTTTGCACACACTGTGAGATaGACACTGCTTTCTGTACAA | + |
|
Preference number: 2 (lower is better) Translates to: SLVLGIEARALGLLGEYFAHTVR*TLLSVQ Trigger: TTGTACAGAAAGCAGTGTCCATCTCACAGTGTGTGC...AAAGTACTCCCCTAGTAAGCCCAAGGCCCTGGCCTCAATTCCCAAAACTAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CCA 90 bp | CATGCTGCAAATCCTTCAGGTAGCTCCTCTGTGATGTCCTTCCTCTCTGTAGATGCACACACTGTGAGATaGACACTGCTTTCTGTACAA | + |
|
Preference number: 2 (lower is better) Translates to: HAANPSGSSSVMSFLSVDAHTVR*TLLSVQ Trigger: TTGTACAGAAAGCAGTGTCCATCTCACAGTGTGTGC...ATCTACAGAGAGGAAGGACATCACAGAGGAGCTACCTGAAGGATTTGCAGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTTAGTTTTGGGAATTGAGGCCAGGGCCTTGGGCTTACTAGGGGAGTACTTTCAAAGCATTGGGTTGTaGATTGCACCACCAGAACTT | + |
|
Preference number: 2 (lower is better) Translates to: SLVLGIEARALGLLGEYFQSIGL*IAPPEL Trigger: AAGTTCTGGTGGTGCAATCCACAACCCAATGCTTTG...AAAGTACTCCCCTAGTAAGCCCAAGGCCCTGGCCTCAATTCCCAAAACTAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR CAA 90 bp | TTGCACCACCAGAACTTTTCATTATTAACTGTCTCCCGCGGGCTCTaGTATTTCAGGGCCATTATATTCCTCTTCAGTGTCCTGGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: LHHQNFSLLTVSRGL*YFRAIIFLFSVLDA Trigger: AGCATCCAGGACACTGAAGAGGAATATAATGGCCCTGAAATACAAGAGCCCGCGGGAGACAGTTAATAATGAAAAGTTCTGGTGGTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGATTTTCTCCTAGCCTTTGCCTCTGGACTTCTGGAAAGAAGACAGAATAGATaGGTGAATGTTGAGGGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: VCVCVCDFLLAFASGLLERRQNR*VNVEGV Trigger: GACTCCCTCAACATTCACTCATCTATTCTGTCTTCT...TTCCAGAAGTCCAGAGGCAAAGGCTAGGAGAAAATCACACACACACACACACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTGTCAGGCTTCACTCTGGCTATAAGAATTCCAATGATCAGAGGAGGAGCATGAGAAGACAGAATAGATaGGTGAATGTTGAGGGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: AVRLHSGYKNSNDQRRSMRRQNR*VNVEGV Trigger: GACTCCCTCAACATTCACTCATCTATTCTGTCTTCT...CATGCTCCTCCTCTGATCATTGGAATTCTTATAGCCAGAGTGAAGCCTGACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAGTAGGGTGTGGTGGCTTTGCCTTTAATCTCAGAACTCAGAAATTGCTAGTGCAAAGGCACACACTGTaGGATGGACACTGCTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LVGCGGFAFNLRTQKLLVQRHTL*DGHCFL Trigger: CAGAAAGCAGTGTCCATCTCACAGTGTGTGCCTTTG...CACTAGCAATTTCTGAGTTCTGAGATTAAAGGCAAAGCCACCACACCCTACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGTCAGGCTTCACTCTGGCTATAAGAATTCCAATGATCAGAGGAGGAGCATGATTATTAGGAATCATTaGTGTCCTCTTGATCCCCGG | + |
|
Preference number: 2 (lower is better) Translates to: AVRLHSGYKNSNDQRRSMIIRNH*CPLDPR Trigger: CCGGGGATCAAGAGGACACCAATGATTCCTAATAAT...CATGCTCCTCCTCTGATCATTGGAATTCTTATAGCCAGAGTGAAGCCTGACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR TCA 90 bp | GGAGGTGGATATGTTGCATTTTCAATGTTCAGTTCTGCTGTCAGGCTTCACTCTTCCTGCAGTCTTGTGTaGTATCTTTCTCTACCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: GGGYVAFSMFSSAVRLHSSCSLV*YLSLPS Trigger: GGAAGGTAGAGAAAGATATCACACAAGACTGCAGGA...AGAGTGAAGCCTGACAGCAGAACTGAACATTGAAAATGCAACATATCCACCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGTGGATATGTTGCATTTTCAATGTTCAGTTCTGCTGTCAGGCTTCACTCTGATACCCATGTAGCATaGGTTTTCACAAGCTCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: GGGYVAFSMFSSAVRLHSDTHVA*VFTSSQ Trigger: CTGAGAGCTTGTGAAAACCCATGCTACATGGGTATC...AGAGTGAAGCCTGACAGCAGAACTGAACATTGAAAATGCAACATATCCACCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGTGGATATGTTGCATTTTCAATGTTCAGTTCTGCTGTCAGGCTTCACTCTCAAAGCATTGGGTTGTaGATTGCACCACCAGAACTT | + |
|
Preference number: 2 (lower is better) Translates to: GGGYVAFSMFSSAVRLHSQSIGL*IAPPEL Trigger: AAGTTCTGGTGGTGCAATCCACAACCCAATGCTTTG...AGAGTGAAGCCTGACAGCAGAACTGAACATTGAAAATGCAACATATCCACCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGTGTGATTTTCTCCTAGCCTTTGCCTCTGGACTTCTGGAATTTAAGGCATGCGACAGAATAGATGAGTaGATGTTGAGGGAGTCAATA | + |
|
Preference number: 2 (lower is better) Translates to: VCDFLLAFASGLLEFKACDRIDE*MLRESI Trigger: TATTGACTCCCTCAACATTCACTCATCTATTCTGTC...GCATGCCTTAAATTCCAGAAGTCCAGAGGCAAAGGCTAGGAGAAAATCACACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTGTCAGGCTTCACTCTGGCTATAAGAATTCCAATGATCAGAGGAGGAGCATGCTCTCCCGCTCATCATaGCTTATGCATTTTAATTAT | + |
|
Preference number: 2 (lower is better) Translates to: AVRLHSGYKNSNDQRRSMLSRSS*LMHFNY Trigger: ATAATTAAAATGCATAAGGCATGATGAGCGGGAGAG...CATGCTCCTCCTCTGATCATTGGAATTCTTATAGCCAGAGTGAAGCCTGACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR GCA 90 bp | CATGCTGCAAATCCTTCAGGTAGCTCCTCTGTGATGTCCTTCCTCTCTGTAGATCTCTCCCGCTCATCATaGCTTATGCATTTTAATTAT | + |
|
Preference number: 2 (lower is better) Translates to: HAANPSGSSSVMSFLSVDLSRSS*LMHFNY Trigger: ATAATTAAAATGCATAAGGCATGATGAGCGGGAGAG...ATCTACAGAGAGGAAGGACATCACAGAGGAGCTACCTGAAGGATTTGCAGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CCA 90 bp | CATTTTCCTGCAGTCTTGTGTGATATCTTTCTCTACCTTCCTCTGAGTTTTCTACACTGCCACCACCTCTaGGCCAATTTACTTTGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: HFPAVLCDIFLYLPLSFLHCHHL*ANLLWQ Trigger: TTGCCAAAGTAAATTGGCCCAGAGGTGGTGGCAGTG...TAGAAAACTCAGAGGAAGGTAGAGAAAGATATCACACAAGACTGCAGGAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAGTAGGGTGTGGTGGCTTTGCCTTTAATCTCAGAACTCAGAAATTGCTAGTGCCTCCTCCTCCTCTATaGATCTACTTATGTGTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: LVGCGGFAFNLRTQKLLVPPPPL*IYLCVL Trigger: TAGCACACATAAGTAGATCCATAGAGGAGGAGGAGG...CACTAGCAATTTCTGAGTTCTGAGATTAAAGGCAAAGCCACCACACCCTACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTATCATGGAGATGAGGGGTAAGTTTTGCTGTGAGTTTCATAAAGCTCATGTCTTTTCTCCTAGCCTTTaGCTCTGGACTTCTGGAATT | + |
|
Preference number: 2 (lower is better) Translates to: PIMEMRGKFCCEFHKAHVFSPSL*LWTSGI Trigger: AATTCCAGAAGTCCAGAGGCAAAGGCTAGGAGAAAA...GACATGAGCTTTATGAAACTCACAGCAAAACTTACCCCTCATCTCCATGATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTATTTCAGGGCCATTATATTCCTCTTCAGTGTCCTGGATGCTCTTGGTTTGTTTTTCTCCTAGCCTTTaGCTCTGGACTTCTGGAATT | + |
|
Preference number: 2 (lower is better) Translates to: CISGPLYSSSVSWMLLVCFSPSL*LWTSGI Trigger: AATTCCAGAAGTCCAGAGGCAAAGGCTAGGAGAAAA...ACAAACCAAGAGCATCCAGGACACTGAAGAGGAATATAATGGCCCTGAAATACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR GCA 90 bp | TTAGTAGGGTGTGGTGGCTTTGCCTTTAATCTCAGAACTCAGAAATTGCTAGTGCATTGGGTTGTGGATTaGACCACCAGAACTTTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LVGCGGFAFNLRTQKLLVHWVVD*TTRTFH Trigger: ATGAAAAGTTCTGGTGGTGCAATCCACAACCCAATG...CACTAGCAATTTCTGAGTTCTGAGATTAAAGGCAAAGCCACCACACCCTACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR GCA 90 bp | TTAGTAGGGTGTGGTGGCTTTGCCTTTAATCTCAGAACTCAGAAATTGCTAGTGAGGAGGTGGATATGTTaGATTTTCAATGTTCAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: LVGCGGFAFNLRTQKLLVRRWIC*IFNVQF Trigger: GAACTGAACATTGAAAATGCAACATATCCACCTCCT...CACTAGCAATTTCTGAGTTCTGAGATTAAAGGCAAAGCCACCACACCCTACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CCA 90 bp | CATTTTCCTGCAGTCTTGTGTGATATCTTTCTCTACCTTCCTCTGAGTTTTCTAAATTCAAGCCAGGTGTaGTGGCATACATCTATAATC | + |
|
Preference number: 2 (lower is better) Translates to: HFPAVLCDIFLYLPLSFLNSSQV*WHTSII Trigger: GATTATAGATGTATGCCACCACACCTGGCTTGAATT...TAGAAAACTCAGAGGAAGGTAGAGAAAGATATCACACAAGACTGCAGGAAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR GCA 72 bp | AGGGTTTTATTCTGTAGCCCTGACTGGCCTGGAACTTaGAGTAGTCCTCCTGCCTCAGCCTCCAAAGCATTG | + |
|
Preference number: 3 (lower is better) Translates to: RVLFCSPDWPGT*SSPPASASKAL Trigger: CAATGCTTTGGAGGCTGAGGCAGGAGGACTACTGCAAGTTCCAGGCCAGTCAGGGCTACAGAATAAAACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR TCA 72 bp | CCAGAAGAGGGTGTCAGATCTCATTACTGGTGGCTGTaGGCCACCATGTGGTTGTTGGGATTTGAACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PEEGVRSHYWWL*ATMWLLGFELR Trigger: CCTGAGTTCAAATCCCAACAACCACATGGTGGCTCACAGCCACCAGTAATGAGATCTGACACCCTCTTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR GCA 72 bp | TTTCAGGGCCATTATATTCCTCTTCAGTGTCCTGGATaGTCTTGGTTTGTTTCACTGATGCAGGGGGCGGCG | + |
|
Preference number: 3 (lower is better) Translates to: FQGHYIPLQCPG*SWFVSLMQGAA Trigger: CGCCGCCCCCTGCATCAGTGAAACAAACCAAGAGCATCCAGGACACTGAAGAGGAATATAATGGCCCTGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR CCA 72 bp | ATTTCTTTGGACAGGGTTTTATTCTGTAGCCCTGACTaGCCTGGAACTTGCAGTAGTCCTCCTGCCTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: ISLDRVLFCSPD*PGTCSSPPASA Trigger: GGCTGAGGCAGGAGGACTACTGCAAGTTCCAGGCCAGTCAGGGCTACAGAATAAAACCCTGTCCAAAGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGCTGCAAATCCTTCAGGTAGCTCCTCTGTGATGTCCTTCCTCTCTGTAGATTCAGCCTCCAAAGCATaGGGTTGTGGATTGCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: HAANPSGSSSVMSFLSVDSASKA*GCGLHH Trigger: GTGGTGCAATCCACAACCCAATGCTTTGGAGGCTGA...ATCTACAGAGAGGAAGGACATCACAGAGGAGCTACCTGAAGGATTTGCAGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGTGGATATGTTGCATTTTCAATGTTCAGTTCTGCTGTCAGGCTTCACTCTTCAGCCTCCAAAGCATaGGGTTGTGGATTGCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: GGGYVAFSMFSSAVRLHSSASKA*GCGLHH Trigger: GTGGTGCAATCCACAACCCAATGCTTTGGAGGCTGA...AGAGTGAAGCCTGACAGCAGAACTGAACATTGAAAATGCAACATATCCACCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTCAGGCTTCACTCTGGCTATAAGAATTCCAATGATCAGAGGAGGAGCATGCAGGTCTTCTCTCCTTaGATCCTTGGTAATGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: AVRLHSGYKNSNDQRRSMQVFSP*ILGNVE Trigger: TTCCACATTACCAAGGATCAAAGGAGAGAAGACCTG...CATGCTCCTCCTCTGATCATTGGAATTCTTATAGCCAGAGTGAAGCCTGACAGC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGTGGATATGTTGCATTTTCAATGTTCAGTTCTGCTGTCAGGCTTCACTCTAATCGCCATCCCGTGTaGACTCAGGTTTCACAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: GGGYVAFSMFSSAVRLHSNRHPV*TQVSQC Trigger: ACACTGTGAAACCTGAGTCAACACGGGATGGCGATT...AGAGTGAAGCCTGACAGCAGAACTGAACATTGAAAATGCAACATATCCACCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTCAGGCTTCACTCTGGCTATAAGAATTCCAATGATCAGAGGAGGAGCATGTTCTTTTCTTTAGTTTaGGGAATTGAGGCCAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: AVRLHSGYKNSNDQRRSMFFSLV*GIEARA Trigger: GGCCCTGGCCTCAATTCCCAAAACTAAAGAAAAGAA...CATGCTCCTCCTCTGATCATTGGAATTCTTATAGCCAGAGTGAAGCCTGACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR CCA 72 bp | ACCCTTATTCCCCCAGCAAAGGCACACACTGTGAGATaGACACTGCTTTCTGTACAAATCTGTCTGACTTAC | + |
|
Preference number: 3 (lower is better) Translates to: TLIPPAKAHTVR*TLLSVQICLTY Trigger: GTAAGTCAGACAGATTTGTACAGAAAGCAGTGTCCATCTCACAGTGTGTGCCTTTGCTGGGGGAATAAGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGATTGCACCACCAGAACTTTTCATTATTAACTGTCTCCCGCGGGCTCTTGTACAGGTCTTCTCTCCTTaGATCCTTGGTAATGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: WIAPPELFIINCLPRALVQVFSP*ILGNVE Trigger: TTCCACATTACCAAGGATCAAAGGAGAGAAGACCTG...TACAAGAGCCCGCGGGAGACAGTTAATAATGAAAAGTTCTGGTGGTGCAATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTCAGGCTTCACTCTGGCTATAAGAATTCCAATGATCAGAGGAGGAGCATGGTTTACATAATGAGTTaGACACCTGCCAGAGCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: AVRLHSGYKNSNDQRRSMVYIMS*TPARAL Trigger: TAGAGCTCTGGCAGGTGTCAAACTCATTATGTAAAC...CATGCTCCTCCTCTGATCATTGGAATTCTTATAGCCAGAGTGAAGCCTGACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTTGGGAATTGAGGCCAGGGCCTTGGGCTTACTAGGGGAGTACTTTACCACTTGCAGACAATTTCATTaGTTTATGATCACACAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VLGIEARALGLLGEYFTTCRQFH*FMITQL Trigger: CAGCTGTGTGATCATAAACAAATGAAATTGTCTGCA...AGTGGTAAAGTACTCCCCTAGTAAGCCCAAGGCCCTGGCCTCAATTCCCAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGTGGATATGTTGCATTTTCAATGTTCAGTTCTGCTGTCAGGCTTCACTCTGTGTCCTGGATGCTCTaGGTTTGTTTCACTGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: GGGYVAFSMFSSAVRLHSVSWML*VCFTDA Trigger: TGCATCAGTGAAACAAACCAAGAGCATCCAGGACAC...AGAGTGAAGCCTGACAGCAGAACTGAACATTGAAAATGCAACATATCCACCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGTGGATATGTTGCATTTTCAATGTTCAGTTCTGCTGTCAGGCTTCACTCTGCATTGGGTTGTGGATaGCACCACCAGAACTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GGGYVAFSMFSSAVRLHSALGCG*HHQNFS Trigger: TGAAAAGTTCTGGTGGTGCAATCCACAACCCAATGC...AGAGTGAAGCCTGACAGCAGAACTGAACATTGAAAATGCAACATATCCACCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTTGGGAATTGAGGCCAGGGCCTTGGGCTTACTAGGGGAGTACTTTACCACTGAGACTCTTATTTCTTaGGACAGGGTTTTATTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VLGIEARALGLLGEYFTTETLIS*DRVLFC Trigger: ACAGAATAAAACCCTGTCCAAAGAAATAAGAGTCTC...AGTGGTAAAGTACTCCCCTAGTAAGCCCAAGGCCCTGGCCTCAATTCCCAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR TCA 72 bp | GTGATGTCCTTCCTCTCTGTAGATGTTCTACTGCTATaGGATACCCAGGGTACTGAGGCTTTAATCACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VMSFLSVDVLLL*DTQGTEALITG Trigger: ACCAGTGATTAAAGCCTCAGTACCCTGGGTATCTCATAGCAGTAGAACATCTACAGAGAGGAAGGACATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR CCA 72 bp | GGCATGCACTGCCACCACCTCTGGGCCAATTTACTTTaGCAAAATCAACCCTTTGTAACAGAAGACAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: GMHCHHLWANLL*QNQPFVTEDRI Trigger: TATTCTGTCTTCTGTTACAAAGGGTTGATTTTGCCAAAGTAAATTGGCCCAGAGGTGGTGGCAGTGCATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR CCA 72 bp | TCACAGTGTCAAGCAGAGCAACAAGCGCACAGAAGATaGCGAATGGGTGTCAGGAATGATAAAAATCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: SQCQAEQQAHRR*RMGVRNDKNHV Trigger: CACATGATTTTTATCATTCCTGACACCCATTCGCCATCTTCTGTGCGCTTGTTGCTCTGCTTGACACTGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGATTGCACCACCAGAACTTTTCATTATTAACTGTCTCCCGCGGGCTCTTGTACTGGGCCAATTTACTTaGGCAAAATCAACCCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: WIAPPELFIINCLPRALVLGQFT*AKSTLC Trigger: ACAAAGGGTTGATTTTGCCAAAGTAAATTGGCCCAG...TACAAGAGCCCGCGGGAGACAGTTAATAATGAAAAGTTCTGGTGGTGCAATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGTGATTTTCTCCTAGCCTTTGCCTCTGGACTTCTGGAATTTAAGGCATGCCTGGGCCAATTTACTTaGGCAAAATCAACCCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: VCDFLLAFASGLLEFKACLGQFT*AKSTLC Trigger: ACAAAGGGTTGATTTTGCCAAAGTAAATTGGCCCAG...GCATGCCTTAAATTCCAGAAGTCCAGAGGCAAAGGCTAGGAGAAAATCACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAGTAGGGTGTGGTGGCTTTGCCTTTAATCTCAGAACTCAGAAATTGCTAGTGGCATTGGGTTGTGGATaGCACCACCAGAACTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LVGCGGFAFNLRTQKLLVALGCG*HHQNFS Trigger: TGAAAAGTTCTGGTGGTGCAATCCACAACCCAATGC...CACTAGCAATTTCTGAGTTCTGAGATTAAAGGCAAAGCCACCACACCCTACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR TCA 72 bp | AAGACCAGAAGAGTACTACTGTGCCTATCATGGAGATaGGGGGTAAGTTTTGCTGTGAGTTTCATAAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: KTRRVLLCLSWR*GVSFAVSFIKL Trigger: GAGCTTTATGAAACTCACAGCAAAACTTACCCCTCATCTCCATGATAGGCACAGTAGTACTCTTCTGGTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR TCA 72 bp | TTTAAGGTAAGTCTGTGTTCCAGGTCTTCTCTCCTTTaGTCCTTGGTAATGTGGAACACGGAATTCTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: FKVSLCSRSSLL*SLVMWNTEFCS Trigger: TGAACAGAATTCCGTGTTCCACATTACCAAGGATCAAAGGAGAGAAGACCTGGAACACAGACTTACCTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAGTAGGGTGTGGTGGCTTTGCCTTTAATCTCAGAACTCAGAAATTGCTAGTGTGCAGACAATTTCATTaGTTTATGATCACACAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LVGCGGFAFNLRTQKLLVCRQFH*FMITQL Trigger: CAGCTGTGTGATCATAAACAAATGAAATTGTCTGCA...CACTAGCAATTTCTGAGTTCTGAGATTAAAGGCAAAGCCACCACACCCTACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR CCA 72 bp | TATTTCCCAGATTCACAGTGTTTAATGACACTTTCTTaGGTATTAGCATTTTCTCTCCAGACAAAGACGGCA | + |
|
Preference number: 3 (lower is better) Translates to: YFPDSQCLMTLS*VLAFSLQTKTA Trigger: TGCCGTCTTTGTCTGGAGAGAAAATGCTAATACCCAAGAAAGTGTCATTAAACACTGTGAATCTGGGAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR TCA 90 bp | GTTTTGGGAATTGAGGCCAGGGCCTTGGGCTTACTAGGGGAGTACTTTACCACTCAGGTGGACCAGACGTaGGAAGCCCACCAGCACGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLGIEARALGLLGEYFTTQVDQT*EAHQHE Trigger: TTCGTGCTGGTGGGCTTCTCACGTCTGGTCCACCTG...AGTGGTAAAGTACTCCCCTAGTAAGCCCAAGGCCCTGGCCTCAATTCCCAAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR TCA 90 bp | GTAGATGGAGGGGACCAGGAGGTGGATATGTTGCATTTTCAATGTTCAGTTCTGTGTGGCGCCGGCCAGTaGGCAGATGGTGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VDGGDQEVDMLHFQCSVLCGAGQ*ADGAAA Trigger: TGCTGCTGCACCATCTGCTCACTGGCCGGCGCCACA...CAGAACTGAACATTGAAAATGCAACATATCCACCTCCTGGTCCCCTCCATCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR CCA 90 bp | TGGATTGCACCACCAGAACTTTTCATTATTAACTGTCTCCCGCGGGCTCTTGTACCAGAGCGCGAGATGTaGCGCCGGCCAGTGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WIAPPELFIINCLPRALVPEREM*RRPVSR Trigger: TCTGCTCACTGGCCGGCGCCACATCTCGCGCTCTGG...TACAAGAGCCCGCGGGAGACAGTTAATAATGAAAAGTTCTGGTGGTGCAATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR CCA 90 bp | GTAGATGGAGGGGACCAGGAGGTGGATATGTTGCATTTTCAATGTTCAGTTCTGCCAGAGCGCGAGATGTaGCGCCGGCCAGTGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VDGGDQEVDMLHFQCSVLPEREM*RRPVSR Trigger: TCTGCTCACTGGCCGGCGCCACATCTCGCGCTCTGG...CAGAACTGAACATTGAAAATGCAACATATCCACCTCCTGGTCCCCTCCATCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR TCA 90 bp | CACCACCTCTGGGCCAATTTACTTTGGCAAAATCAACCCTTTGTAACAGAAGACTGTGGCGCCGGCCAGTaGGCAGATGGTGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HHLWANLLWQNQPFVTEDCGAGQ*ADGAAA Trigger: TGCTGCTGCACCATCTGCTCACTGGCCGGCGCCACA...GTCTTCTGTTACAAAGGGTTGATTTTGCCAAAGTAAATTGGCCCAGAGGTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR GCA 90 bp | GTTTTGGGAATTGAGGCCAGGGCCTTGGGCTTACTAGGGGAGTACTTTACCACTTCTCCACACACCAACTaGAGCACCGGCTGGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLGIEARALGLLGEYFTTSPHTN*STGWIS Trigger: TGAGATCCAGCCGGTGCTGCAGTTGGTGTGTGGAGA...AGTGGTAAAGTACTCCCCTAGTAAGCCCAAGGCCCTGGCCTCAATTCCCAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR CAA 72 bp | ACTGGTGGCTGTGAGCCACCATGTGGTTGTTGGGATTaGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGGCEPPCGCWD*NSGPLEEQSVL Trigger: GAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAACAACCACATGGTGGCTCACAGCCACCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCTCTCCAGACAAAGACGGCACAAAATCGCCATCCCGTGTTGACTCAGGTTAGACTAGCGCCACGATaGGGAGATTGCCTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FSLQTKTAQNRHPVLTQVRLAPR*GDCLPQ Trigger: CTGTGGCAGGCAATCTCCTCATCGTGGCGCTAGTCT...AACCTGAGTCAACACGGGATGGCGATTTTGTGCCGTCTTTGTCTGGAGAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCTCTCCAGACAAAGACGGCACAAAATCGCCATCCCGTGTTGACTCAGGTTGCAGATCTCCAGGGCTaGGAGGATGCGGAGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSLQTKTAQNRHPVLTQVADLQG*EDAEEE Trigger: TTCTTCCTCCGCATCCTCTCAGCCCTGGAGATCTGC...AACCTGAGTCAACACGGGATGGCGATTTTGTGCCGTCTTTGTCTGGAGAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCTCTCCAGACAAAGACGGCACAAAATCGCCATCCCGTGTTGACTCAGGTTGCAGCAAGGGGACTGTaGCCGACGTGTAGCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: FSLQTKTAQNRHPVLTQVAARGL*PTCSRS Trigger: AGATCTGCTACACGTCGGTCACAGTCCCCTTGCTGC...AACCTGAGTCAACACGGGATGGCGATTTTGTGCCGTCTTTGTCTGGAGAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR TCA 90 bp | CACCACCTCTGGGCCAATTTACTTTGGCAAAATCAACCCTTTGTAACAGAAGACCAGGTGGACCAGACGTaGGAAGCCCACCAGCACGAA | + |
|
Preference number: 4 (lower is better) Translates to: HHLWANLLWQNQPFVTEDQVDQT*EAHQHE Trigger: TTCGTGCTGGTGGGCTTCTCACGTCTGGTCCACCTG...GTCTTCTGTTACAAAGGGTTGATTTTGCCAAAGTAAATTGGCCCAGAGGTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGATTTTCTCCTAGCCTTTGCCTCTGGACTTCTGGAAGATTGCCTGCCACAGTaGGCAGGTAGACGGTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCDFLLAFASGLLEDCLPQ*AGRRSR Trigger: TCTTGACCGTCTACCTGCTCACTGTGGCAGGCAATC...TTCCAGAAGTCCAGAGGCAAAGGCTAGGAGAAAATCACACACACACACACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR TCA 90 bp | GTAGATGGAGGGGACCAGGAGGTGGATATGTTGCATTTTCAATGTTCAGTTCTGGCAGATCTCCAGGGCTaGGAGGATGCGGAGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VDGGDQEVDMLHFQCSVLADLQG*EDAEEE Trigger: TTCTTCCTCCGCATCCTCTCAGCCCTGGAGATCTGC...CAGAACTGAACATTGAAAATGCAACATATCCACCTCCTGGTCCCCTCCATCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGATTTTCTCCTAGCCTTTGCCTCTGGACTTCTGGAATCTCCACACACCAACTaGAGCACCGGCTGGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCDFLLAFASGLLESPHTN*STGWIS Trigger: TGAGATCCAGCCGGTGCTGCAGTTGGTGTGTGGAGA...TTCCAGAAGTCCAGAGGCAAAGGCTAGGAGAAAATCACACACACACACACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCTCTCCAGACAAAGACGGCACAAAATCGCCATCCCGTGTTGACTCAGGTTGCAGCCAGGATAATCTaGAGCTCGTTGAGCGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSLQTKTAQNRHPVLTQVAARII*SSLSEV Trigger: CACCTCGCTCAACGAGCTGCAGATTATCCTGGCTGC...AACCTGAGTCAACACGGGATGGCGATTTTGTGCCGTCTTTGTCTGGAGAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR CCA 90 bp | GGTAAGTCTGTGTTCCAGGTCTTCTCTCCTTTGATCCTTGGTAATGTGGAACACAAGATGAAGGAGGTGTaGCCCAGCCCCACTAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GKSVFQVFSPLILGNVEHKMKEV*PSPTRA Trigger: GGCTCTAGTGGGGCTGGGCCACACCTCCTTCATCTT...GTGTTCCACATTACCAAGGATCAAAGGAGAGAAGACCTGGAACACAGACTTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR CCA 90 bp | CACCACCTCTGGGCCAATTTACTTTGGCAAAATCAACCCTTTGTAACAGAAGACAGTGAGGGACAGCGTTaGGGCCACAGAAGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HHLWANLLWQNQPFVTEDSEGQR*GHRRAR Trigger: CCTTGCCCTTCTGTGGCCCCAACGCTGTCCCTCACT...GTCTTCTGTTACAAAGGGTTGATTTTGCCAAAGTAAATTGGCCCAGAGGTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR GCA 90 bp | GTAGATGGAGGGGACCAGGAGGTGGATATGTTGCATTTTCAATGTTCAGTTCTGGCAGCCAGGATAATCTaGAGCTCGTTGAGCGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VDGGDQEVDMLHFQCSVLAARII*SSLSEV Trigger: CACCTCGCTCAACGAGCTGCAGATTATCCTGGCTGC...CAGAACTGAACATTGAAAATGCAACATATCCACCTCCTGGTCCCCTCCATCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR TCA 90 bp | TTAGTAGGGTGTGGTGGCTTTGCCTTTAATCTCAGAACTCAGAAATTGCTAGTGGCAGCAAGGGGACTGTaGCCGACGTGTAGCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LVGCGGFAFNLRTQKLLVAARGL*PTCSRS Trigger: AGATCTGCTACACGTCGGTCACAGTCCCCTTGCTGC...CACTAGCAATTTCTGAGTTCTGAGATTAAAGGCAAAGCCACCACACCCTACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR GCA 90 bp | TTAGTAGGGTGTGGTGGCTTTGCCTTTAATCTCAGAACTCAGAAATTGCTAGTGACAGGGAGAAGAGGATaGCCTGCAGGTGGACCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LVGCGGFAFNLRTQKLLVTGRRG*PAGGPD Trigger: GTCTGGTCCACCTGCAGGGCATCCTCTTCTCCCTGT...CACTAGCAATTTCTGAGTTCTGAGATTAAAGGCAAAGCCACCACACCCTACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR GCA 90 bp | TGTATTTCAGGGCCATTATATTCCTCTTCAGTGTCCTGGATGCTCTTGGTTTGTACAGGGAGAAGAGGATaGCCTGCAGGTGGACCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CISGPLYSSSVSWMLLVCTGRRG*PAGGPD Trigger: GTCTGGTCCACCTGCAGGGCATCCTCTTCTCCCTGT...ACAAACCAAGAGCATCCAGGACACTGAAGAGGAATATAATGGCCCTGAAATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR GCA 90 bp | CATGCTGCAAATCCTTCAGGTAGCTCCTCTGTGATGTCCTTCCTCTCTGTAGATAAGTACATGGGAGACTaGAACGCTGCATCTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HAANPSGSSSVMSFLSVDKYMGD*NAASVE Trigger: CTCCACAGATGCAGCGTTGCAGTCTCCCATGTACTT...ATCTACAGAGAGGAAGGACATCACAGAGGAGCTACCTGAAGGATTTGCAGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR CAA 72 bp | CCTCCTGCCTCAGCCTCCAAAGCATTGGGTTGTGGATaGCACCACCAGAACTTTTCATTATTAACTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPASASKALGCG*HHQNFSLLTVS Trigger: GGAGACAGTTAATAATGAAAAGTTCTGGTGGTGCAATCCACAACCCAATGCTTTGGAGGCTGAGGCAGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR TCA 90 bp | TGTATTTCAGGGCCATTATATTCCTCTTCAGTGTCCTGGATGCTCTTGGTTTGTGATTGCCTGCCACAGTaGGCAGGTAGACGGTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CISGPLYSSSVSWMLLVCDCLPQ*AGRRSR Trigger: TCTTGACCGTCTACCTGCTCACTGTGGCAGGCAATC...ACAAACCAAGAGCATCCAGGACACTGAAGAGGAATATAATGGCCCTGAAATACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR CCA 90 bp | GTAGATGGAGGGGACCAGGAGGTGGATATGTTGCATTTTCAATGTTCAGTTCTGGCAGGCAGCACTCGGTaGCACCAAAGAAAAGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VDGGDQEVDMLHFQCSVLAGSTR*HQRKGK Trigger: TTTTCCTTTTCTTTGGTGCCACCGAGTGCTGCCTGC...CAGAACTGAACATTGAAAATGCAACATATCCACCTCCTGGTCCCCTCCATCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR CCA 90 bp | CATTTTCCTGCAGTCTTGTGTGATATCTTTCTCTACCTTCCTCTGAGTTTTCTAAGTGAGGGACAGCGTTaGGGCCACAGAAGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HFPAVLCDIFLYLPLSFLSEGQR*GHRRAR Trigger: CCTTGCCCTTCTGTGGCCCCAACGCTGTCCCTCACT...TAGAAAACTCAGAGGAAGGTAGAGAAAGATATCACACAAGACTGCAGGAAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR GCA 90 bp | CACCACCTCTGGGCCAATTTACTTTGGCAAAATCAACCCTTTGTAACAGAAGACAGGAAAAAGAACATTTaGAGAGCGCAGCCAGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HHLWANLLWQNQPFVTEDRKKNI*RAQPER Trigger: GCGCTCTGGCTGCGCTCTGCAAATGTTCTTTTTCCT...GTCTTCTGTTACAAAGGGTTGATTTTGCCAAAGTAAATTGGCCCAGAGGTGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR GCA 90 bp | CCTATCATGGAGATGAGGGGTAAGTTTTGCTGTGAGTTTCATAAAGCTCATGTCAAGTACATGGGAGACTaGAACGCTGCATCTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PIMEMRGKFCCEFHKAHVKYMGD*NAASVE Trigger: CTCCACAGATGCAGCGTTGCAGTCTCCCATGTACTT...GACATGAGCTTTATGAAACTCACAGCAAAACTTACCCCTCATCTCCATGATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR CCA 90 bp | CCTATCATGGAGATGAGGGGTAAGTTTTGCTGTGAGTTTCATAAAGCTCATGTCGCAGGCAGCACTCGGTaGCACCAAAGAAAAGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PIMEMRGKFCCEFHKAHVAGSTR*HQRKGK Trigger: TTTTCCTTTTCTTTGGTGCCACCGAGTGCTGCCTGC...GACATGAGCTTTATGAAACTCACAGCAAAACTTACCCCTCATCTCCATGATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR CAA 72 bp | CAGGAGTTTAAGGCCAGGTTAGTTTACATAATGAGTTaGACACCTGCCAGAGCTCTAGCAGACTCCGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QEFKARLVYIMS*TPARALADSVK Trigger: TTTGACGGAGTCTGCTAGAGCTCTGGCAGGTGTCAAACTCATTATGTAAACTAACCTGGCCTTAAACTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR CAA 72 bp | ATATTTCCCAGATTCACAGTGTTTAATGACACTTTCTaGGGTATTAGCATTTTCTCTCCAGACAAAGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: IFPRFTVFNDTF*GISIFSPDKDG Trigger: GCCGTCTTTGTCTGGAGAGAAAATGCTAATACCCAAGAAAGTGTCATTAAACACTGTGAATCTGGGAAATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| 3UTR CAA 72 bp | GTTCTAGTCAACCCTACTTGCTCATGTCGGTCCTGCTaGCTCCAGCCCAAAGATTTATTTATTATTATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLVNPTCSCRSC*LQPKDLFIIIN Trigger: ATTTATAATAATAAATAAATCTTTGGGCTGGAGCAAGCAGGACCGACATGAGCAAGTAGGGTTGACTAGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGATTTTCTCCTAGCCTTTGCCTCTGGACTTCTGGAAGCCACGATGAGGAGATaGCCTGCCACAGTGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCDFLLAFASGLLEATMRR*PATVSR Trigger: CCTGCTCACTGTGGCAGGCAATCTCCTCATCGTGGC...TTCCAGAAGTCCAGAGGCAAAGGCTAGGAGAAAATCACACACACACACACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR CAA 90 bp | GGTAAGTCTGTGTTCCAGGTCTTCTCTCCTTTGATCCTTGGTAATGTGGAACACGCCACGATGAGGAGATaGCCTGCCACAGTGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GKSVFQVFSPLILGNVEHATMRR*PATVSR Trigger: CCTGCTCACTGTGGCAGGCAATCTCCTCATCGTGGC...GTGTTCCACATTACCAAGGATCAAAGGAGAGAAGACCTGGAACACAGACTTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR CAA 90 bp | CATGCTGCAAATCCTTCAGGTAGCTCCTCTGTGATGTCCTTCCTCTCTGTAGATAAGGAAAAAGAACATTaGCAGAGCGCAGCCAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: HAANPSGSSSVMSFLSVDKEKEH*QSAARA Trigger: CGCTCTGGCTGCGCTCTGCAAATGTTCTTTTTCCTT...ATCTACAGAGAGGAAGGACATCACAGAGGAGCTACCTGAAGGATTTGCAGCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR CAA 90 bp | TGGATTGCACCACCAGAACTTTTCATTATTAACTGTCTCCCGCGGGCTCTTGTAATAATCTGCAGCTCGTaGAGCGAGGTGTCTCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: WIAPPELFIINCLPRALVIICSS*SEVSPH Trigger: GTGTGGAGACACCTCGCTCAACGAGCTGCAGATTAT...TACAAGAGCCCGCGGGAGACAGTTAATAATGAAAAGTTCTGGTGGTGCAATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR CAA 90 bp | TGTATTTCAGGGCCATTATATTCCTCTTCAGTGTCCTGGATGCTCTTGGTTTGTCTTTTTAGGGCGGCCTaGACGTCTGCATTCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CISGPLYSSSVSWMLLVCLFRAA*TSAFLR Trigger: CCTGAGGAATGCAGACGTCAAGGCCGCCCTAAAAAG...ACAAACCAAGAGCATCCAGGACACTGAAGAGGAATATAATGGCCCTGAAATACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR CAA 90 bp | CATTTTCCTGCAGTCTTGTGTGATATCTTTCTCTACCTTCCTCTGAGTTTTCTACTTTTTAGGGCGGCCTaGACGTCTGCATTCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HFPAVLCDIFLYLPLSFLLFRAA*TSAFLR Trigger: CCTGAGGAATGCAGACGTCAAGGCCGCCCTAAAAAG...TAGAAAACTCAGAGGAAGGTAGAGAAAGATATCACACAAGACTGCAGGAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS-3UTR CAA 90 bp | CATTTTCCTGCAGTCTTGTGTGATATCTTTCTCTACCTTCCTCTGAGTTTTCTAAAGGAAAAAGAACATTaGCAGAGCGCAGCCAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: HFPAVLCDIFLYLPLSFLKEKEH*QSAARA Trigger: CGCTCTGGCTGCGCTCTGCAAATGTTCTTTTTCCTT...TAGAAAACTCAGAGGAAGGTAGAGAAAGATATCACACAAGACTGCAGGAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS TCA 72 bp | ACGCGGCGCCCGCGAGCTGCACACAAACCCTGCGGCTaGGCAGCACCTGGTAGCGCAGGGGCTCGCAGATCG | + |
|
Preference number: 6 (lower is better) Translates to: TRRPRAAHKPCG*AAPGSAGARRS Trigger: CGATCTGCGAGCCCCTGCGCTACCAGGTGCTGCTCAGCCGCAGGGTTTGTGTGCAGCTCGCGGGCGCCGCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS CCA 72 bp | AAGAACATTTGCAGAGCGCAGCCAGAGCGCGAGATGTaGCGCCGGCCAGTGAGCAGATGGTGCAGCAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: KNICRAQPEREM*RRPVSRWCSSK Trigger: CTTGCTGCTGCACCATCTGCTCACTGGCCGGCGCCACATCTCGCGCTCTGGCTGCGCTCTGCAAATGTTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS CAA 90 bp | GGGCACAAGATGATAAGGGCGGCAGCCAGGATAATCTGCAGCTCGTaGAGCGAGGTGTCTCCACACACCAACTGCAGCACCGGCTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: GHKMIRAAARIICSS*SEVSPHTNCSTGWI Trigger: GATCCAGCCGGTGCTGCAGTTGGTGTGTGGAGACACCTCGCTCAACGAGCTGCAGATTATCCTGGCTGCCGCCCTTATCATCTTGTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS GCA 72 bp | GGGCACAAGATGATAAGGGCGGCAGCCAGGATAATCTaGAGCTCGTTGAGCGAGGTGTCTCCACACACCAAC | + |
|
Preference number: 6 (lower is better) Translates to: GHKMIRAAARII*SSLSEVSPHTN Trigger: GTTGGTGTGTGGAGACACCTCGCTCAACGAGCTGCAGATTATCCTGGCTGCCGCCCTTATCATCTTGTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||
| CDS CAA 72 bp | ATGATAAGGGCGGCAGCCAGGATAATCTGCAGCTCGTaGAGCGAGGTGTCTCCACACACCAACTGCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: MIRAAARIICSS*SEVSPHTNCST Trigger: GGTGCTGCAGTTGGTGTGTGGAGACACCTCGCTCAACGAGCTGCAGATTATCCTGGCTGCCGCCCTTATCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060728.7 ENSMUST00000216318.2 |
||