Pregenerated sensors for OLFR943 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094970Ensembl transcript IDs: ENSMUST00000213176.3, ENSMUST00000213507.2, ENSMUST00000213830.3, ENSMUST00000215770.3
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGAAACTGTGCTTTGAGGTGAGTGCCACCTCGGCCTCGCCCACCTaGCTTGTTGCTGCACCGCCATCCTGGGCCCCACACTCACCAGGC | + |
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Preference number: 1 (lower is better) Translates to: VKLCFEVSATSASPT*LVAAPPSWAPHSPG Trigger: GCCTGGTGAGTGTGGGGCCCAGGATGGCGGTGCAGCAACAAGGCAGGTGGGCGAGGCCGAGGTGGCACTCACCTCAAAGCACAGTTTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR TCA 90 bp | ACACTCACCAGGCACCTCGGAGGGCCCGTTTGCCCCATCCTTCTCTaGGCCTTGGCCACCTGCTACCATGGCGTGCGGAGCCACTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: TLTRHLGGPVCPILL*ALATCYHGVRSHSE Trigger: TTCAGAGTGGCTCCGCACGCCATGGTAGCAGGTGGCCAAGGCTCAGAGAAGGATGGGGCAAACGGGCCCTCCGAGGTGCCTGGTGAGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR GCA 90 bp | GATTTCGACCCACTGCTGAGCCCCACATCTCCGAAGCAGAGGCGGTaGACAACCTTGTTGGCGCCAGGTTTGGCTGCCACCTCCCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: DFDPLLSPTSPKQRR*TTLLAPGLAATSPA Trigger: GGCAGGGGAGGTGGCAGCCAAACCTGGCGCCAACAAGGTTGTGCACCGCCTCTGCTTCGGAGATGTGGGGCTCAGCAGTGGGTCGAAATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR CCA 90 bp | CCAGGCACCTCGGAGGGCCCGTTTGCCCCATCCTTCTCTGAGCCTTaGCCACCTGCTACCATGGCGTGCGGAGCCACTCTGAAAAGGACT | + |
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Preference number: 1 (lower is better) Translates to: PGTSEGPFAPSFSEP*PPATMACGATLKRT Trigger: AGTCCTTTTCAGAGTGGCTCCGCACGCCATGGTAGCAGGTGGCCAAGGCTCAGAGAAGGATGGGGCAAACGGGCCCTCCGAGGTGCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR CCA 90 bp | CATCTCCGAAGCAGAGGCGGTGCACAACCTTGTTGGCGCCAGGTTTaGCTGCCACCTCCCCTGCCACTGCCACCACCTTGGCCTTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: HLRSRGGAQPCWRQV*LPPPLPLPPPWPSS Trigger: AGAAGAAGGCCAAGGTGGTGGCAGTGGCAGGGGAGGTGGCAGCCAAACCTGGCGCCAACAAGGTTGTGCACCGCCTCTGCTTCGGAGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR GCA 90 bp | TTTGCCCCATCCTTCTCTGAGCCTTGGCCACCTGCTACCATGGCGTaGGGAGCCACTCTGAAAAGGACTCTGGATTTCGACCCACTGCTG | + |
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Preference number: 1 (lower is better) Translates to: FAPSFSEPWPPATMA*GATLKRTLDFDPLL Trigger: CAGCAGTGGGTCGAAATCCAGAGTCCTTTTCAGAGTGGCTCCGCACGCCATGGTAGCAGGTGGCCAAGGCTCAGAGAAGGATGGGGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR TCA 90 bp | CCTGCCACTGCCACCACCTTGGCCTTCTTCTCAGGCACAAGAGGCTaGAAGCGGCCCAATCTGTTGTGGGCTAGAAAACCTAAGCGAGTG | + |
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Preference number: 1 (lower is better) Translates to: PATATTLAFFSGTRG*KRPNLLWARKPKRV Trigger: CACTCGCTTAGGTTTTCTAGCCCACAACAGATTGGGCCGCTTTCAGCCTCTTGTGCCTGAGAAGAAGGCCAAGGTGGTGGCAGTGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR CCA 90 bp | ATTCCCAGACCCCAATTTGGGCGCCAAATTGTTGGGGCCGGCCTGTaGCTCTTATATCCGGGTTTGAGCCTGGGAGGCATCTTGGAGCAA | + |
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Preference number: 1 (lower is better) Translates to: IPRPQFGRQIVGAGL*LLYPGLSLGGILEQ Trigger: TTGCTCCAAGATGCCTCCCAGGCTCAAACCCGGATATAAGAGCCACAGGCCGGCCCCAACAATTTGGCGCCCAAATTGGGGTCTGGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213507.2 |
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| 3UTR TCA 90 bp | TTTTTGCCCGTTGCTTCTCGGGTTCCAGTACGAAATTTCTATCTGTaGAGTTCCCTACCAGCAGTGTTTCTTACAGCATCCTCTACCATT | + |
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Preference number: 1 (lower is better) Translates to: FLPVASRVPVRNFYL*SSLPAVFLTASSTI Trigger: AATGGTAGAGGATGCTGTAAGAAACACTGCTGGTAGGGAACTTCACAGATAGAAATTTCGTACTGGAACCCGAGAAGCAACGGGCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR GCA 90 bp | CCTAACAGTATATTTTGTAAGGTACTGACTTTAAAGATGTTGGACTaGTTACAGCTAAGACTGCTGGGAGTAAGCAGCTTTTGGAAGATG | + |
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Preference number: 1 (lower is better) Translates to: PNSIFCKVLTLKMLD*LQLRLLGVSSFWKM Trigger: CATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTTAGCTGTAAGCAGTCCAACATCTTTAAAGTCAGTACCTTACAAAATATACTGTTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR CCA 90 bp | GACAGAAGATTATTACAATTTGCTAGTGTTAGTTTGAGGACAAATTaGGCAATTCAGTCAGAAGTGAGAAAAGCCAATCTGAATCAGTTC | + |
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Preference number: 1 (lower is better) Translates to: DRRLLQFASVSLRTN*AIQSEVRKANLNQF Trigger: GAACTGATTCAGATTGGCTTTTCTCACTTCTGACTGAATTGCCCAATTTGTCCTCAAACTAACACTAGCAAATTGTAATAATCTTCTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR CAA 90 bp | CGCCATCCTGGGCCCCACACTCACCAGGCACCTCGGAGGGCCCGTTaGCCCCATCCTTCTCTGAGCCTTGGCCACCTGCTACCATGGCGT | + |
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Preference number: 2 (lower is better) Translates to: RHPGPHTHQAPRRAR*PHPSLSLGHLLPWR Trigger: ACGCCATGGTAGCAGGTGGCCAAGGCTCAGAGAAGGATGGGGCAAACGGGCCCTCCGAGGTGCCTGGTGAGTGTGGGGCCCAGGATGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR CAA 90 bp | CTGCTGAGCCCCACATCTCCGAAGCAGAGGCGGTGCACAACCTTGTaGGCGCCAGGTTTGGCTGCCACCTCCCCTGCCACTGCCACCACC | + |
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Preference number: 2 (lower is better) Translates to: LLSPTSPKQRRCTTL*APGLAATSPATATT Trigger: GGTGGTGGCAGTGGCAGGGGAGGTGGCAGCCAAACCTGGCGCCAACAAGGTTGTGCACCGCCTCTGCTTCGGAGATGTGGGGCTCAGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR CCA 90 bp | TTTCCAGCAGGGGCCCTCCTGCTGTGCCTGATCCCGGCTAAAGCATGTGACCAGAAGCAGCACAGCAGGTaGCCCTGCCTCAGTGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: FPAGALLLCLIPAKACDQKQHSR*PCLSGE Trigger: TTCACCACTGAGGCAGGGCCACCTGCTGTGCTGCTT...CTGGTCACATGCTTTAGCCGGGATCAGGCACAGCAGGAGGGCCCCTGCTGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR TCA 90 bp | TTTCCAGCAGGGGCCCTCCTGCTGTGCCTGATCCCGGCTAAAGCATGTGACCAGTCTTATATCCGGGTTTaGGCCTGGGAGGCATCTTGG | + |
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Preference number: 2 (lower is better) Translates to: FPAGALLLCLIPAKACDQSYIRV*AWEASW Trigger: CCAAGATGCCTCCCAGGCTCAAACCCGGATATAAGA...CTGGTCACATGCTTTAGCCGGGATCAGGCACAGCAGGAGGGCCCCTGCTGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR CAA 90 bp | GGGCGCCAAATTGTTGGGGCCGGCCTGTGGCTCTTATATCCGGGTTaGAGCCTGGGAGGCATCTTGGAGCTGAAAGAGAAGAGGGAATCT | + |
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Preference number: 2 (lower is better) Translates to: GRQIVGAGLWLLYPG*SLGGILELKEKRES Trigger: AGATTCCCTCTTCTCTTTCAGCTCCAAGATGCCTCCCAGGCTCAAACCCGGATATAAGAGCCACAGGCCGGCCCCAACAATTTGGCGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR GCA 90 bp | CTAAGACTGCTGGGAGTAAGCAGCTTTTGGAAGATGGAGGGAAGAGTTTTCCTGGCCCACCTGCCTTGTTaGTGCACCGCCATCCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LRLLGVSSFWKMEGRVFLAHLPC*CTAILG Trigger: GCCCAGGATGGCGGTGCAGCAACAAGGCAGGTGGGC...CAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCACAGCAGGTGGCCCTGCCTCAGTGGTGAATGGTCTGAACCAGCCTACCACATACCAATGTAGTTaGGGGAAATCTCAGGGACCC | + |
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Preference number: 2 (lower is better) Translates to: SSTAGGPASVVNGLNQPTTYQCS*GKSQGP Trigger: GGGTCCCTGAGATTTCCCCCAACTACATTGGTATGT...GGTAGGCTGGTTCAGACCATTCACCACTGAGGCAGGGCCACCTGCTGTGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR CAA 90 bp | GGGCGCCAAATTGTTGGGGCCGGCCTGTGGCTCTTATATCCGGGTTaGAGCCTGGGAGGCATCTTGGAGCAAATTCACAGTTTGCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: GRQIVGAGLWLLYPG*SLGGILEQIHSLQL Trigger: TAACTGCAAACTGTGAATTTGCTCCAAGATGCCTCCCAGGCTCAAACCCGGATATAAGAGCCACAGGCCGGCCCCAACAATTTGGCGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213507.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCAGCAGGGGCCCTCCTGCTGTGCCTGATCCCGGCTAAAGCATGTGACCAGGACCCCATTCCTAGATaGAGAAATAGGGACATTCAC | + |
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Preference number: 2 (lower is better) Translates to: FPAGALLLCLIPAKACDQDPIPR*RNRDIH Trigger: GTGAATGTCCCTATTTCTCCATCTAGGAATGGGGTC...CTGGTCACATGCTTTAGCCGGGATCAGGCACAGCAGGAGGGCCCCTGCTGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR CCA 90 bp | TTTCCAGCAGGGGCCCTCCTGCTGTGCCTGATCCCGGCTAAAGCATGTGACCAGGGTGTCTTGAATGCATaGCAGAAACATGAAACTGGG | + |
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Preference number: 2 (lower is better) Translates to: FPAGALLLCLIPAKACDQGVLNA*QKHETG Trigger: CCCAGTTTCATGTTTCTGCCATGCATTCAAGACACC...CTGGTCACATGCTTTAGCCGGGATCAGGCACAGCAGGAGGGCCCCTGCTGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR TCA 90 bp | CTAAGACTGCTGGGAGTAAGCAGCTTTTGGAAGATGGAGGGAAGAGTTTTCCTGTGCCCCATCCTTCTCTaGGCCTTGGCCACCTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: LRLLGVSSFWKMEGRVFLCPILL*ALATCY Trigger: GTAGCAGGTGGCCAAGGCTCAGAGAAGGATGGGGCA...CAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCACAGCAGGTGGCCCTGCCTCAGTGGTGAATGGTCTGAACCAGCCTACCGAGTCAGTCTTTCTATaGCTCTATAGGAGTGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: SSTAGGPASVVNGLNQPTESVFL*LYRSER Trigger: CCTTTCACTCCTATAGAGCCATAGAAAGACTGACTC...GGTAGGCTGGTTCAGACCATTCACCACTGAGGCAGGGCCACCTGCTGTGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR CCA 90 bp | ACAAGAAGCAGCACAGCAGGTGGCCCTGCCTCAGTGGTGAATGGTCTGAACCAGACATACCAATGTAGTTaGGGGAAATCTCAGGGACCC | + |
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Preference number: 2 (lower is better) Translates to: TRSSTAGGPASVVNGLNQTYQCS*GKSQGP Trigger: GGGTCCCTGAGATTTCCCCCAACTACATTGGTATGT...CTGGTTCAGACCATTCACCACTGAGGCAGGGCCACCTGCTGTGCTGCTTCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR CCA 90 bp | CCCCAATTTGGGCGCCAAATTGTTGGGGCCGGCCTGTGGCTCTTATATCCGGGTGGTGTCTTGAATGCATaGCAGAAACATGAAACTGGG | + |
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Preference number: 2 (lower is better) Translates to: PQFGRQIVGAGLWLLYPGGVLNA*QKHETG Trigger: CCCAGTTTCATGTTTCTGCCATGCATTCAAGACACC...ACCCGGATATAAGAGCCACAGGCCGGCCCCAACAATTTGGCGCCCAAATTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR GCA 90 bp | AAGACTGCTGGGAGTAAGCAGCTTTTGGAAGATGGAGGGAAGAGTTTTCCTGGTCCTGCTACCATGGCGTaGGGAGCCACTCTGAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: KTAGSKQLLEDGGKSFPGPATMA*GATLKR Trigger: CCTTTTCAGAGTGGCTCCGCACGCCATGGTAGCAGG...ACCAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR TCA 90 bp | AGCAGCACAGCAGGTGGCCCTGCCTCAGTGGTGAATGGTCTGAACCAGCCTACCAATTCTACGTTTACTTaGACACACCAACACAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: SSTAGGPASVVNGLNQPTNSTFT*THQHRN Trigger: GTTTCTGTGTTGGTGTGTTCAAGTAAACGTAGAATT...GGTAGGCTGGTTCAGACCATTCACCACTGAGGCAGGGCCACCTGCTGTGCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR TCA 90 bp | CACCTTGGCCTTCTTCTCAGGCACAAGAGGCTGAAAGCGGCCCAATCTGTTGTGAAAATTTTTCTAACCTaGGCATTGTGGCCCTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: HLGLLLRHKRLKAAQSVVKIFLT*ALWPWC Trigger: GCACCAGGGCCACAATGCTCAGGTTAGAAAAATTTT...CACAACAGATTGGGCCGCTTTCAGCCTCTTGTGCCTGAGAAGAAGGCCAAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCACAGCAGGTGGCCCTGCCTCAGTGGTGAATGGTCTGAACCAGCCTACCTTTCTGCTGAGATTATaGAACCTAGAGGAGAATCTA | + |
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Preference number: 2 (lower is better) Translates to: SSTAGGPASVVNGLNQPTFLLRL*NLEENL Trigger: TAGATTCTCCTCTAGGTTCCATAATCTCAGCAGAAA...GGTAGGCTGGTTCAGACCATTCACCACTGAGGCAGGGCCACCTGCTGTGCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR CCA 90 bp | CTAAGACTGCTGGGAGTAAGCAGCTTTTGGAAGATGGAGGGAAGAGTTTTCCTGCCACTGCCACCACCTTaGCCTTCTTCTCAGGCACAA | + |
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Preference number: 2 (lower is better) Translates to: LRLLGVSSFWKMEGRVFLPLPPP*PSSQAQ Trigger: TTGTGCCTGAGAAGAAGGCCAAGGTGGTGGCAGTGG...CAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR CAA 90 bp | TATCCGGGTTTGAGCCTGGGAGGCATCTTGGAGCAAATTCACAGTTaGCAGTTAACTCCGGAAAATCTTGGAGAACCTGTTAGGCCTCGG | + |
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Preference number: 2 (lower is better) Translates to: YPGLSLGGILEQIHS*QLTPENLGEPVRPR Trigger: CCGAGGCCTAACAGGTTCTCCAAGATTTTCCGGAGTTAACTGCAAACTGTGAATTTGCTCCAAGATGCCTCCCAGGCTCAAACCCGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213507.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGAAGCAGCACAGCAGGTGGCCCTGCCTCAGTGGTGAATGGTCTGAACCAGTGTAATAAGGTGTCTTaGATGCATGGCAGAAACATG | + |
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Preference number: 2 (lower is better) Translates to: TRSSTAGGPASVVNGLNQCNKVS*MHGRNM Trigger: CATGTTTCTGCCATGCATTCAAGACACCTTATTACA...CTGGTTCAGACCATTCACCACTGAGGCAGGGCCACCTGCTGTGCTGCTTCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR GCA 90 bp | TTTCCAGCAGGGGCCCTCCTGCTGTGCCTGATCCCGGCTAAAGCATGTGACCAGGTTATTATATCCAGTTaGAACATCCATGAAACACAG | + |
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Preference number: 2 (lower is better) Translates to: FPAGALLLCLIPAKACDQVIISS*NIHETQ Trigger: CTGTGTTTCATGGATGTTGCAACTGGATATAATAAC...CTGGTCACATGCTTTAGCCGGGATCAGGCACAGCAGGAGGGCCCCTGCTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR CCA 90 bp | CCTTTTTGCCCGTTGCTTCTCGGGTTCCAGTACGAAATTTCTATCTGTGAAGTTAAGCAGCACAGCAGGTaGCCCTGCCTCAGTGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: PFCPLLLGFQYEISICEVKQHSR*PCLSGE Trigger: TTCACCACTGAGGCAGGGCCACCTGCTGTGCTGCTT...AACTTCACAGATAGAAATTTCGTACTGGAACCCGAGAAGCAACGGGCAAAAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR CCA 90 bp | AAGACTGCTGGGAGTAAGCAGCTTTTGGAAGATGGAGGGAAGAGTTTTCCTGGTAGAGATAAAAGCAGGTaGATGCGTGGCAGGCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: KTAGSKQLLEDGGKSFPGRDKSR*MRGRQA Trigger: TGCCTGCCTGCCACGCATCCACCTGCTTTTATCTCT...ACCAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR GCA 90 bp | CTAAGACTGCTGGGAGTAAGCAGCTTTTGGAAGATGGAGGGAAGAGTTTTCCTGCCCATCCCCAGTCACTaGCAAGGTTCTTGTGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: LRLLGVSSFWKMEGRVFLPIPSH*QGSCEV Trigger: AACTTCACAAGAACCTTGGCAGTGACTGGGGATGGG...CAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR TCA 90 bp | CTAAGACTGCTGGGAGTAAGCAGCTTTTGGAAGATGGAGGGAAGAGTTTTCCTGAAGAGATGGAATAACTaGTTGTGGGGCGAAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: LRLLGVSSFWKMEGRVFLKRWNN*LWGEEP Trigger: TGGCTCTTCGCCCCACAATCAGTTATTCCATCTCTT...CAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGATGGAATAACTGATTGTGGGGCGAAGAGCCACACTCTTCCATCCACAACAACATACCAATGTAGTTaGGGGAAATCTCAGGGACCC | + |
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Preference number: 2 (lower is better) Translates to: RDGITDCGAKSHTLPSTTTYQCS*GKSQGP Trigger: GGGTCCCTGAGATTTCCCCCAACTACATTGGTATGT...TGTTGTGGATGGAAGAGTGTGGCTCTTCGCCCCACAATCAGTTATTCCATCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR CAA 90 bp | GATGTTGGACTGCTTACAGCTAAGACTGCTGGGAGTAAGCAGCTTTaGGAAGATGGAGGGAAGAGTTTTCCTGGTGAGAAGGAACAATCT | + |
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Preference number: 2 (lower is better) Translates to: DVGLLTAKTAGSKQL*EDGGKSFPGEKEQS Trigger: AGATTGTTCCTTCTCACCAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTTAGCTGTAAGCAGTCCAACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR TCA 90 bp | CTCGGGTTCCAGTACGAAATTTCTATCTGTGAAGTTCCCTACCAGCAGTGTTTCCTGCCAAGGTTCTTGTaGAGTTGTCAGAACAGCGTT | + |
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Preference number: 2 (lower is better) Translates to: LGFQYEISICEVPYQQCFLPRFL*SCQNSV Trigger: AACGCTGTTCTGACAACTTCACAAGAACCTTGGCAG...GAAACACTGCTGGTAGGGAACTTCACAGATAGAAATTTCGTACTGGAACCCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR GCA 90 bp | CCTTTTTGCCCGTTGCTTCTCGGGTTCCAGTACGAAATTTCTATCTGTGAAGTTCCCATCCCCAGTCACTaGCAAGGTTCTTGTGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: PFCPLLLGFQYEISICEVPIPSH*QGSCEV Trigger: AACTTCACAAGAACCTTGGCAGTGACTGGGGATGGG...AACTTCACAGATAGAAATTTCGTACTGGAACCCGAGAAGCAACGGGCAAAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGATGGAATAACTGATTGTGGGGCGAAGAGCCACACTCTTCCATCCACAACAGGGGTTTCATGGAAATaGCTGGACAGAGATGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: RDGITDCGAKSHTLPSTTGVSWK*LDRDEK Trigger: TTTCTCATCTCTGTCCAGCCATTTCCATGAAACCCC...TGTTGTGGATGGAAGAGTGTGGCTCTTCGCCCCACAATCAGTTATTCCATCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CCA 90 bp | AGAGATGGAATAACTGATTGTGGGGCGAAGAGCCACACTCTTCCATCCACAACAGACCCCATTCCTAGATaGAGAAATAGGGACATTCAC | + |
|
Preference number: 2 (lower is better) Translates to: RDGITDCGAKSHTLPSTTDPIPR*RNRDIH Trigger: GTGAATGTCCCTATTTCTCCATCTAGGAATGGGGTC...TGTTGTGGATGGAAGAGTGTGGCTCTTCGCCCCACAATCAGTTATTCCATCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CCA 90 bp | CTAAGACTGCTGGGAGTAAGCAGCTTTTGGAAGATGGAGGGAAGAGTTTTCCTGGACCCCATTCCTAGATaGAGAAATAGGGACATTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LRLLGVSSFWKMEGRVFLDPIPR*RNRDIH Trigger: GTGAATGTCCCTATTTCTCCATCTAGGAATGGGGTC...CAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CCA 90 bp | AGAGATGGAATAACTGATTGTGGGGCGAAGAGCCACACTCTTCCATCCACAACAGGTGTCTTGAATGCATaGCAGAAACATGAAACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: RDGITDCGAKSHTLPSTTGVLNA*QKHETG Trigger: CCCAGTTTCATGTTTCTGCCATGCATTCAAGACACC...TGTTGTGGATGGAAGAGTGTGGCTCTTCGCCCCACAATCAGTTATTCCATCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CCA 90 bp | CTCGGGTTCCAGTACGAAATTTCTATCTGTGAAGTTCCCTACCAGCAGTGTTTCGGGGTTTCATGGAAATaGCTGGACAGAGATGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LGFQYEISICEVPYQQCFGVSWK*LDRDEK Trigger: TTTCTCATCTCTGTCCAGCCATTTCCATGAAACCCC...GAAACACTGCTGGTAGGGAACTTCACAGATAGAAATTTCGTACTGGAACCCGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTAGCAACCTTTTTGCCCGTTGCTTCTCGGGTTCCAGTACGAAATTTCTATCTGGGGTTTCATGGAAATaGCTGGACAGAGATGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: PSNLFARCFSGSSTKFLSGVSWK*LDRDEK Trigger: TTTCTCATCTCTGTCCAGCCATTTCCATGAAACCCC...AGATAGAAATTTCGTACTGGAACCCGAGAAGCAACGGGCAAAAAGGTTGCTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR TCA 90 bp | AGAGATGGAATAACTGATTGTGGGGCGAAGAGCCACACTCTTCCATCCACAACATGTAATAAGGTGTCTTaGATGCATGGCAGAAACATG | + |
|
Preference number: 2 (lower is better) Translates to: RDGITDCGAKSHTLPSTTCNKVS*MHGRNM Trigger: CATGTTTCTGCCATGCATTCAAGACACCTTATTACA...TGTTGTGGATGGAAGAGTGTGGCTCTTCGCCCCACAATCAGTTATTCCATCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR TCA 90 bp | AAGACTGCTGGGAGTAAGCAGCTTTTGGAAGATGGAGGGAAGAGTTTTCCTGGTAAACTCTTAGCTTCTTaGTTACAGCTCACTAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: KTAGSKQLLEDGGKSFPGKLLAS*LQLTRS Trigger: GCTTCTAGTGAGCTGTAATCAAGAAGCTAAGAGTTT...ACCAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR GCA 90 bp | ATCTTATATGTAGGACCTAGAGACTGCCTGAGATATAAATCCAGCATGGCAATGCCCATCCCCAGTCACTaGCAAGGTTCTTGTGAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: ILYVGPRDCLRYKSSMAMPIPSH*QGSCEV Trigger: AACTTCACAAGAACCTTGGCAGTGACTGGGGATGGG...CATTGCCATGCTGGATTTATATCTCAGGCAGTCTCTAGGTCCTACATATAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR GCA 90 bp | CTAAGACTGCTGGGAGTAAGCAGCTTTTGGAAGATGGAGGGAAGAGTTTTCCTGTCCCTAGTCACAGTTTaGGAAACAAAGGAGATTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LRLLGVSSFWKMEGRVFLSLVTV*ETKEIL Trigger: CAAAATCTCCTTTGTTTCGCAAACTGTGACTAGGGA...CAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CCA 90 bp | CGGCTAAAGCATGTGACCAGTTTCTTAGACAAAAACACAAAGAGGGTAGAGAACAGAGCAGGGGTTTCATaGAAATGGCTGGACAGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: RLKHVTSFLDKNTKRVENRAGVS*KWLDRD Trigger: ATCTCTGTCCAGCCATTTCCATGAAACCCCTGCTCT...GTTCTCTACCCTCTTTGTGTTTTTGTCTAAGAAACTGGTCACATGCTTTAGCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTAGCAACCTTTTTGCCCGTTGCTTCTCGGGTTCCAGTACGAAATTTCTATCTGAGTCAGTCTTTCTATaGCTCTATAGGAGTGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: PSNLFARCFSGSSTKFLSESVFL*LYRSER Trigger: CCTTTCACTCCTATAGAGCCATAGAAAGACTGACTC...AGATAGAAATTTCGTACTGGAACCCGAGAAGCAACGGGCAAAAAGGTTGCTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CCA 90 bp | CTAAGACTGCTGGGAGTAAGCAGCTTTTGGAAGATGGAGGGAAGAGTTTTCCTGAGGGTATGGCTGCTATaGAGAGGGAAAAAGAAATAT | + |
|
Preference number: 2 (lower is better) Translates to: LRLLGVSSFWKMEGRVFLRVWLL*RGKKKY Trigger: ATATTTCTTTTTCCCTCTCCATAGCAGCCATACCCT...CAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR CAA 90 bp | GGTATGGCTGCTATGGAGAGGGAAAAAGAAATATTTGGGGGAATTTaGGGAACAGGGATGGGAAGTCAATGGAGAAGAAGTAGTAATCTG | + |
|
Preference number: 2 (lower is better) Translates to: GMAAMEREKEIFGGI*GTGMGSQWRRSSNL Trigger: CAGATTACTACTTCTTCTCCATTGACTTCCCATCCCTGTTCCCAAAATTCCCCCAAATATTTCTTTTTCCCTCTCCATAGCAGCCATACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR TCA 90 bp | CTAAGACTGCTGGGAGTAAGCAGCTTTTGGAAGATGGAGGGAAGAGTTTTCCTGGAAAAATGCAACTTCTaGTTTCTTCTCTCACTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LRLLGVSSFWKMEGRVFLEKCNF*FLLSLV Trigger: GACTAGTGAGAGAAGAAATCAGAAGTTGCATTTTTC...CAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CCA 90 bp | CTAAGACTGCTGGGAGTAAGCAGCTTTTGGAAGATGGAGGGAAGAGTTTTCCTGAAAGGTTTTACAGATTaGGATATTCCCAACTGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LRLLGVSSFWKMEGRVFLKGFTD*DIPNCH Trigger: GTGACAGTTGGGAATATCCCAATCTGTAAAACCTTT...CAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR TCA 90 bp | CCTTTTTGCCCGTTGCTTCTCGGGTTCCAGTACGAAATTTCTATCTGTGAAGTTTGTAATAAGGTGTCTTaGATGCATGGCAGAAACATG | + |
|
Preference number: 2 (lower is better) Translates to: PFCPLLLGFQYEISICEVCNKVS*MHGRNM Trigger: CATGTTTCTGCCATGCATTCAAGACACCTTATTACA...AACTTCACAGATAGAAATTTCGTACTGGAACCCGAGAAGCAACGGGCAAAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR TCA 90 bp | CACCTAGCAACCTTTTTGCCCGTTGCTTCTCGGGTTCCAGTACGAAATTTCTATAATTCTACGTTTACTTaGACACACCAACACAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: HLATFLPVASRVPVRNFYNSTFT*THQHRN Trigger: GTTTCTGTGTTGGTGTGTTCAAGTAAACGTAGAATT...ATAGAAATTTCGTACTGGAACCCGAGAAGCAACGGGCAAAAAGGTTGCTAGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CCA 90 bp | CGGCTAAAGCATGTGACCAGTTTCTTAGACAAAAACACAAAGAGGGTAGAGAACGAGTCAGTCTTTCTATaGCTCTATAGGAGTGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: RLKHVTSFLDKNTKRVENESVFL*LYRSER Trigger: CCTTTCACTCCTATAGAGCCATAGAAAGACTGACTC...GTTCTCTACCCTCTTTGTGTTTTTGTCTAAGAAACTGGTCACATGCTTTAGCCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CCA 90 bp | AGTAGTAAAATCCAAGGTGACAAGGGTACAAACCAGTTATTATATCCAGTTGCAACATACCAATGTAGTTaGGGGAAATCTCAGGGACCC | + |
|
Preference number: 2 (lower is better) Translates to: SSKIQGDKGTNQLLYPVATYQCS*GKSQGP Trigger: GGGTCCCTGAGATTTCCCCCAACTACATTGGTATGT...TGCAACTGGATATAATAACTGGTTTGTACCCTTGTCACCTTGGATTTTACTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR TCA 90 bp | ATCTTATATGTAGGACCTAGAGACTGCCTGAGATATAAATCCAGCATGGCAATGTGTAATAAGGTGTCTTaGATGCATGGCAGAAACATG | + |
|
Preference number: 2 (lower is better) Translates to: ILYVGPRDCLRYKSSMAMCNKVS*MHGRNM Trigger: CATGTTTCTGCCATGCATTCAAGACACCTTATTACA...CATTGCCATGCTGGATTTATATCTCAGGCAGTCTCTAGGTCCTACATATAAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CCA 90 bp | GGTTCTATAAACATAGTCAACTATGAGTTTCTGCTGAGATTATGGAACCTAGAGGGGGTTTCATGGAAATaGCTGGACAGAGATGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: GSINIVNYEFLLRLWNLEGVSWK*LDRDEK Trigger: TTTCTCATCTCTGTCCAGCCATTTCCATGAAACCCC...CTCTAGGTTCCATAATCTCAGCAGAAACTCATAGTTGACTATGTTTATAGAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR CAA 90 bp | GGCAATTCAGTCAGAAGTGAGAAAAGCCAATCTGAATCAGTTCTATaGGTGAGAATTTTTGAGCAAGACACCAGAGTTAAATTATCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: GNSVRSEKSQSESVL*VRIFEQDTRVKLSS Trigger: GCTGGATAATTTAACTCTGGTGTCTTGCTCAAAAATTCTCACCAATAGAACTGATTCAGATTGGCTTTTCTCACTTCTGACTGAATTGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR GCA 90 bp | ATCCCGGCTAAAGCATGTGACCAGTTTCTTAGACAAAAACACAAAGAGGGTAGAGTTATTATATCCAGTTaGAACATCCATGAAACACAG | + |
|
Preference number: 2 (lower is better) Translates to: IPAKACDQFLRQKHKEGRVIISS*NIHETQ Trigger: CTGTGTTTCATGGATGTTGCAACTGGATATAATAAC...TCTACCCTCTTTGTGTTTTTGTCTAAGAAACTGGTCACATGCTTTAGCCGGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CCA 90 bp | AGTAGTAAAATCCAAGGTGACAAGGGTACAAACCAGTTATTATATCCAGTTGCAGAGTCAGTCTTTCTATaGCTCTATAGGAGTGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: SSKIQGDKGTNQLLYPVAESVFL*LYRSER Trigger: CCTTTCACTCCTATAGAGCCATAGAAAGACTGACTC...TGCAACTGGATATAATAACTGGTTTGTACCCTTGTCACCTTGGATTTTACTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR CAA 90 bp | CACAATATCAGCTACTATATTCAGAATCACAATGAAAATATACTTTaGGCAGCATGTATCAGGGTAGAGGAATTCCAGTCTAGCAACATG | + |
|
Preference number: 2 (lower is better) Translates to: HNISYYIQNHNENIL*AACIRVEEFQSSNM Trigger: CATGTTGCTAGACTGGAATTCCTCTACCCTGATACATGCTGCCAAAAGTATATTTTCATTGTGATTCTGAATATAGTAGCTGATATTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR CCA 72 bp | GCCTCGCCCACCTGCCTTGTTGCTGCACCGCCATCCTaGGCCCCACACTCACCAGGCACCTCGGAGGGCCCG | + |
|
Preference number: 3 (lower is better) Translates to: ASPTCLVAAPPS*APHSPGTSEGP Trigger: CGGGCCCTCCGAGGTGCCTGGTGAGTGTGGGGCCCAGGATGGCGGTGCAGCAACAAGGCAGGTGGGCGAGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR GCA 72 bp | GAGTGCCACCTCGGCCTCGCCCACCTGCCTTGTTGCTaGACCGCCATCCTGGGCCCCACACTCACCAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: ECHLGLAHLPCC*TAILGPTLTRH Trigger: GTGCCTGGTGAGTGTGGGGCCCAGGATGGCGGTGCAGCAACAAGGCAGGTGGGCGAGGCCGAGGTGGCACTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR GCA 72 bp | GGTGAGTGCCACCTCGGCCTCGCCCACCTGCCTTGTTaGTGCACCGCCATCCTGGGCCCCACACTCACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GECHLGLAHLPC*CTAILGPTLTR Trigger: CCTGGTGAGTGTGGGGCCCAGGATGGCGGTGCAGCAACAAGGCAGGTGGGCGAGGCCGAGGTGGCACTCACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR TCA 72 bp | AGGCACCTCGGAGGGCCCGTTTGCCCCATCCTTCTCTaGGCCTTGGCCACCTGCTACCATGGCGTGCGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RHLGGPVCPILL*ALATCYHGVRS Trigger: GCTCCGCACGCCATGGTAGCAGGTGGCCAAGGCTCAGAGAAGGATGGGGCAAACGGGCCCTCCGAGGTGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR GCA 72 bp | TGCTTTGAGGTGAGTGCCACCTCGGCCTCGCCCACCTaGCTTGTTGCTGCACCGCCATCCTGGGCCCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: CFEVSATSASPT*LVAAPPSWAPH Trigger: GTGTGGGGCCCAGGATGGCGGTGCAGCAACAAGGCAGGTGGGCGAGGCCGAGGTGGCACTCACCTCAAAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR GCA 72 bp | GAGGCGGTGCACAACCTTGTTGGCGCCAGGTTTGGCTaGCACCTCCCCTGCCACTGCCACCACCTTGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: EAVHNLVGARFG*HLPCHCHHLGL Trigger: AAGGCCAAGGTGGTGGCAGTGGCAGGGGAGGTGGCAGCCAAACCTGGCGCCAACAAGGTTGTGCACCGCCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR CCA 72 bp | TCGGAGGGCCCGTTTGCCCCATCCTTCTCTGAGCCTTaGCCACCTGCTACCATGGCGTGCGGAGCCACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SEGPFAPSFSEP*PPATMACGATL Trigger: CAGAGTGGCTCCGCACGCCATGGTAGCAGGTGGCCAAGGCTCAGAGAAGGATGGGGCAAACGGGCCCTCCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR CCA 72 bp | CCACATCTCCGAAGCAGAGGCGGTGCACAACCTTGTTaGCGCCAGGTTTGGCTGCCACCTCCCCTGCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: PHLRSRGGAQPC*RQVWLPPPLPL Trigger: CAGTGGCAGGGGAGGTGGCAGCCAAACCTGGCGCCAACAAGGTTGTGCACCGCCTCTGCTTCGGAGATGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCAGCAGGGGCCCTCCTGCTGTGCCTGATCCCGGCTAAAGCATGTGACCAGAGCCTGGGAGGCATCTaGGAGCTGAAAGAGAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: FPAGALLLCLIPAKACDQSLGGI*ELKEKR Trigger: CCTCTTCTCTTTCAGCTCCAAGATGCCTCCCAGGCT...CTGGTCACATGCTTTAGCCGGGATCAGGCACAGCAGGAGGGCCCCTGCTGGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR GCA 72 bp | TCCTTCTCTGAGCCTTGGCCACCTGCTACCATGGCGTaGGGAGCCACTCTGAAAAGGACTCTGGATTTCGAC | + |
|
Preference number: 3 (lower is better) Translates to: SFSEPWPPATMA*GATLKRTLDFD Trigger: GTCGAAATCCAGAGTCCTTTTCAGAGTGGCTCCGCACGCCATGGTAGCAGGTGGCCAAGGCTCAGAGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCAGCAGGGGCCCTCCTGCTGTGCCTGATCCCGGCTAAAGCATGTGACCAGATACAGTCCACTTATTaGCGAGAGAGCAGGGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: FPAGALLLCLIPAKACDQIQSTY*RESRGF Trigger: GAAACCCCTGCTCTCTCGCAAATAAGTGGACTGTAT...CTGGTCACATGCTTTAGCCGGGATCAGGCACAGCAGGAGGGCCCCTGCTGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR TCA 72 bp | GCCACCACCTTGGCCTTCTTCTCAGGCACAAGAGGCTaGAAGCGGCCCAATCTGTTGTGGGCTAGAAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: ATTLAFFSGTRG*KRPNLLWARKP Trigger: AGGTTTTCTAGCCCACAACAGATTGGGCCGCTTTCAGCCTCTTGTGCCTGAGAAGAAGGCCAAGGTGGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR GCA 72 bp | AAGGAGAGAGACAAGAAGCAGCACAGCAGGTGGCCCTaGCTCAGTGGTGAATGGTCTGAACCAGCCTACCTA | + |
|
Preference number: 3 (lower is better) Translates to: KERDKKQHSRWP*LSGEWSEPAYL Trigger: TAGGTAGGCTGGTTCAGACCATTCACCACTGAGGCAGGGCCACCTGCTGTGCTGCTTCTTGTCTCTCTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR CCA 72 bp | TACCATTCCCAGACCCCAATTTGGGCGCCAAATTGTTaGGGCCGGCCTGTGGCTCTTATATCCGGGTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: YHSQTPIWAPNC*GRPVALISGFE Trigger: CTCAAACCCGGATATAAGAGCCACAGGCCGGCCCCAACAATTTGGCGCCCAAATTGGGGTCTGGGAATGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CAA 90 bp | CACCTTGGCCTTCTTCTCAGGCACAAGAGGCTGAAAGCGGCCCAATCTGTTGTGCTCTTATATCCGGGTTaGAGCCTGGGAGGCATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: HLGLLLRHKRLKAAQSVVLLYPG*SLGGIL Trigger: CAAGATGCCTCCCAGGCTCAAACCCGGATATAAGAG...CACAACAGATTGGGCCGCTTTCAGCCTCTTGTGCCTGAGAAGAAGGCCAAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR TCA 72 bp | TTGTTGGGGCCGGCCTGTGGCTCTTATATCCGGGTTTaGGCCTGGGAGGCATCTTGGAGCAAATTCACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LLGPACGSYIRV*AWEASWSKFTV Trigger: AACTGTGAATTTGCTCCAAGATGCCTCCCAGGCTCAAACCCGGATATAAGAGCCACAGGCCGGCCCCAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213507.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGAAGCAGCACAGCAGGTGGCCCTGCCTCAGTGGTGAATGGTCTGAACCAGATACAGTCCACTTATTaGCGAGAGAGCAGGGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: TRSSTAGGPASVVNGLNQIQSTY*RESRGF Trigger: GAAACCCCTGCTCTCTCGCAAATAAGTGGACTGTAT...CTGGTTCAGACCATTCACCACTGAGGCAGGGCCACCTGCTGTGCTGCTTCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGACTGCTGGGAGTAAGCAGCTTTTGGAAGATGGAGGGAAGAGTTTTCCTGGTGCCACTGCCACCACCTaGGCCTTCTTCTCAGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: KTAGSKQLLEDGGKSFPGATATT*AFFSGT Trigger: TGTGCCTGAGAAGAAGGCCAAGGTGGTGGCAGTGGC...ACCAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR TCA 72 bp | AAACAGTTTTTCCAGCAGGGGCCCTCCTGCTGTGCCTaGTCCCGGCTAAAGCATGTGACCAGTTTCTTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: KQFFQQGPSCCA*SRLKHVTSFLD Trigger: GTCTAAGAAACTGGTCACATGCTTTAGCCGGGATCAGGCACAGCAGGAGGGCCCCTGCTGGAAAAACTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCCAATTTGGGCGCCAAATTGTTGGGGCCGGCCTGTGGCTCTTATATCCGGGTAACCAAATTCACAGTTaGCAGTTAACTCCGGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: PQFGRQIVGAGLWLLYPGNQIHS*QLTPEN Trigger: ATTTTCCGGAGTTAACTGCAAACTGTGAATTTGGTT...ACCCGGATATAAGAGCCACAGGCCGGCCCCAACAATTTGGCGCCCAAATTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CAA 90 bp | CACCTTGGCCTTCTTCTCAGGCACAAGAGGCTGAAAGCGGCCCAATCTGTTGTGAAACTGAATTTGACTTaGAAGTCTTCTCCCCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HLGLLLRHKRLKAAQSVVKLNLT*KSSPQE Trigger: TTCCTGGGGAGAAGACTTCAAAGTCAAATTCAGTTT...CACAACAGATTGGGCCGCTTTCAGCCTCTTGTGCCTGAGAAGAAGGCCAAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTAGCAACCTTTTTGCCCGTTGCTTCTCGGGTTCCAGTACGAAATTTCTATCTCTCTTATATCCGGGTTaGAGCCTGGGAGGCATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: PSNLFARCFSGSSTKFLSLLYPG*SLGGIL Trigger: CAAGATGCCTCCCAGGCTCAAACCCGGATATAAGAG...AGATAGAAATTTCGTACTGGAACCCGAGAAGCAACGGGCAAAAAGGTTGCTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR CCA 72 bp | TGCTTACAGCTAAGACTGCTGGGAGTAAGCAGCTTTTaGAAGATGGAGGGAAGAGTTTTCCTGGTGAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: CLQLRLLGVSSF*KMEGRVFLVRR Trigger: CCTTCTCACCAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTTAGCTGTAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CAA 90 bp | CACCTAGCAACCTTTTTGCCCGTTGCTTCTCGGGTTCCAGTACGAAATTTCTATAGCCTGGGAGGCATCTaGGAGCAAATTCACAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: HLATFLPVASRVPVRNFYSLGGI*EQIHSL Trigger: CAAACTGTGAATTTGCTCCAAGATGCCTCCCAGGCT...ATAGAAATTTCGTACTGGAACCCGAGAAGCAACGGGCAAAAAGGTTGCTAGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213507.2 |
||
| 3UTR TCA 72 bp | CGACCTGATGCAGTTTCCAACTGCGGCCAATCCCCCTaGTTATTAAATCCAAACCCTTTTATTTCTCTCGCC | + |
|
Preference number: 3 (lower is better) Translates to: RPDAVSNCGQSP*LLNPNPFISLA Trigger: GGCGAGAGAAATAAAAGGGTTTGGATTTAATAATCAGGGGGATTGGCCGCAGTTGGAAACTGCATCAGGTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR TCA 72 bp | GTTGCTTCTCGGGTTCCAGTACGAAATTTCTATCTGTaGAGTTCCCTACCAGCAGTGTTTCTTACAGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: VASRVPVRNFYL*SSLPAVFLTAS Trigger: GGATGCTGTAAGAAACACTGCTGGTAGGGAACTTCACAGATAGAAATTTCGTACTGGAACCCGAGAAGCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR CCA 72 bp | AAACCCTTTTATTTCTCTCGCCTAAAAAGCAGCTTCTaGAAGCTGCAGCCGACTGCCTATTACGTTCCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: KPFYFSRLKSSF*KLQPTAYYVPR Trigger: TCTAGGAACGTAATAGGCAGTCGGCTGCAGCTTCCAGAAGCTGCTTTTTAGGCGAGAGAAATAAAAGGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CAA 90 bp | CGGCTAAAGCATGTGACCAGTTTCTTAGACAAAAACACAAAGAGGGTAGAGAACATACAGTCCACTTATTaGCGAGAGAGCAGGGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RLKHVTSFLDKNTKRVENIQSTY*RESRGF Trigger: GAAACCCCTGCTCTCTCGCAAATAAGTGGACTGTAT...GTTCTCTACCCTCTTTGTGTTTTTGTCTAAGAAACTGGTCACATGCTTTAGCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CAA 90 bp | CTAAGACTGCTGGGAGTAAGCAGCTTTTGGAAGATGGAGGGAAGAGTTTTCCTGGGACATTCACGATTATaGAGAAGAGAGTCAGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LRLLGVSSFWKMEGRVFLGHSRL*RRESVF Trigger: AAAGACTGACTCTCTTCTCAATAATCGTGAATGTCC...CAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CAA 90 bp | CTAAGACTGCTGGGAGTAAGCAGCTTTTGGAAGATGGAGGGAAGAGTTTTCCTGAAACTGAATTTGACTTaGAAGTCTTCTCCCCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LRLLGVSSFWKMEGRVFLKLNLT*KSSPQE Trigger: TTCCTGGGGAGAAGACTTCAAAGTCAAATTCAGTTT...CAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CAA 90 bp | CACCTAGCAACCTTTTTGCCCGTTGCTTCTCGGGTTCCAGTACGAAATTTCTATGGACATTCACGATTATaGAGAAGAGAGTCAGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: HLATFLPVASRVPVRNFYGHSRL*RRESVF Trigger: AAAGACTGACTCTCTTCTCAATAATCGTGAATGTCC...ATAGAAATTTCGTACTGGAACCCGAGAAGCAACGGGCAAAAAGGTTGCTAGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CAA 90 bp | CACCTAGCAACCTTTTTGCCCGTTGCTTCTCGGGTTCCAGTACGAAATTTCTATAAACTGAATTTGACTTaGAAGTCTTCTCCCCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HLATFLPVASRVPVRNFYKLNLT*KSSPQE Trigger: TTCCTGGGGAGAAGACTTCAAAGTCAAATTCAGTTT...ATAGAAATTTCGTACTGGAACCCGAGAAGCAACGGGCAAAAAGGTTGCTAGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR TCA 72 bp | GCAGCTTTTGGAAGATGGAGGGAAGAGTTTTCCTGGTaGGAAGGAACAATCTGTATCCAAAGATGGACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: AAFGRWREEFSW*EGTICIQRWTK Trigger: TTTTGTCCATCTTTGGATACAGATTGTTCCTTCTCACCAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTTTGCCCGTTGCTTCTCGGGTTCCAGTACGAAATTTCTATCTGTGAAGTTAAACTGAATTTGACTTaGAAGTCTTCTCCCCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PFCPLLLGFQYEISICEVKLNLT*KSSPQE Trigger: TTCCTGGGGAGAAGACTTCAAAGTCAAATTCAGTTT...AACTTCACAGATAGAAATTTCGTACTGGAACCCGAGAAGCAACGGGCAAAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTTTGCCCGTTGCTTCTCGGGTTCCAGTACGAAATTTCTATCTGTGAAGTTAACCAAATTCACAGTTaGCAGTTAACTCCGGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: PFCPLLLGFQYEISICEVNQIHS*QLTPEN Trigger: ATTTTCCGGAGTTAACTGCAAACTGTGAATTTGGTT...AACTTCACAGATAGAAATTTCGTACTGGAACCCGAGAAGCAACGGGCAAAAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR TCA 72 bp | ATTCCTAGATGGAGAAATAGGGACATTCACGATTATTaGGAAGAGAGTCAGTCTTTCTATGGCTCTATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: IPRWRNRDIHDY*EESQSFYGSIG Trigger: TCCTATAGAGCCATAGAAAGACTGACTCTCTTCTCAATAATCGTGAATGTCCCTATTTCTCCATCTAGGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR GCA 72 bp | ACAGCCATAGTTATACAAGCTACAATTAAACTGAAGTaGTGGAAACGAAGAATGGGTCTCACTTTTGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: TAIVIQATIKLK*WKRRMGLTFDE Trigger: TTCATCAAAAGTGAGACCCATTCTTCGTTTCCAGCACTTCAGTTTAATTGTAGCTTGTATAACTATGGCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR CCA 72 bp | TGCTTAAAGCAGATAAAGAAAAAGTCATGGTGGTGGTaGACATTTACTGTTGATAATGTGATAGTAGGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: CLKQIKKKSWWW*TFTVDNVIVGY Trigger: ATACCCTACTATCACATTATCAACAGTAAATGTCCACCACCACCATGACTTTTTCTTTATCTGCTTTAAGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR CCA 72 bp | TTATTACAATTTGCTAGTGTTAGTTTGAGGACAAATTaGGCAATTCAGTCAGAAGTGAGAAAAGCCAATCTG | + |
|
Preference number: 3 (lower is better) Translates to: LLQFASVSLRTN*AIQSEVRKANL Trigger: CAGATTGGCTTTTCTCACTTCTGACTGAATTGCCCAATTTGTCCTCAAACTAACACTAGCAAATTGTAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR TCA 72 bp | AAATTTAATGCCTGGTTCTATAAACATAGTCAACTATaGGTTTCTGCTGAGATTATGGAACCTAGAGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KFNAWFYKHSQL*VSAEIMEPRGE Trigger: TTCTCCTCTAGGTTCCATAATCTCAGCAGAAACTCATAGTTGACTATGTTTATAGAACCAGGCATTAAATTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR TCA 72 bp | GCTTCCCAGAAACTGAAAGCAATTAAAGATATCAGATaGTTTTGGCACAGAGCACATATAAATCAAACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: ASQKLKAIKDIR*FWHRAHINQTE Trigger: TTCAGTTTGATTTATATGTGCTCTGTGCCAAAATCATCTGATATCTTTAATTGCTTTCAGTTTCTGGGAAGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR TCA 72 bp | ACAATATACACTGAAAGATTCAAACTCTTAGCTTCTTaGTTACAGCTCACTAGAAGCAACCCCATTACAATT | + |
|
Preference number: 3 (lower is better) Translates to: TIYTERFKLLAS*LQLTRSNPITI Trigger: AATTGTAATGGGGTTGCTTCTAGTGAGCTGTAATCAAGAAGCTAAGAGTTTGAATCTTTCAGTGTATATTGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR TCA 72 bp | GAAGTGAGAAAAGCCAATCTGAATCAGTTCTATTGGTaGGAATTTTTGAGCAAGACACCAGAGTTAAATTAT | + |
|
Preference number: 3 (lower is better) Translates to: EVRKANLNQFYW*EFLSKTPELNY Trigger: ATAATTTAACTCTGGTGTCTTGCTCAAAAATTCTCACCAATAGAACTGATTCAGATTGGCTTTTCTCACTTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR GCA 72 bp | AGAGGGATTGTTTTTAAACACAGTAATTGGGATGCATaGATGCATGAATTTATAGAAGATACAAAAGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: RGIVFKHSNWDA*MHEFIEDTKAC Trigger: GCATGCTTTTGTATCTTCTATAAATTCATGCATGCATGCATCCCAATTACTGTGTTTAAAAACAATCCCTCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR CCA 72 bp | ATAAACATAGTCAACTATGAGTTTCTGCTGAGATTATaGAACCTAGAGGAGAATCTAATAGTGTCACTTACA | + |
|
Preference number: 3 (lower is better) Translates to: INIVNYEFLLRL*NLEENLIVSLT Trigger: TGTAAGTGACACTATTAGATTCTCCTCTAGGTTCCATAATCTCAGCAGAAACTCATAGTTGACTATGTTTAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR CAA 72 bp | AGCCCCACATCTCCGAAGCAGAGGCGGTGCACAACCTaGTTGGCGCCAGGTTTGGCTGCCACCTCCCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPTSPKQRRCTT*LAPGLAATSPA Trigger: GGCAGGGGAGGTGGCAGCCAAACCTGGCGCCAACAAGGTTGTGCACCGCCTCTGCTTCGGAGATGTGGGGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR CAA 72 bp | CCCACATCTCCGAAGCAGAGGCGGTGCACAACCTTGTaGGCGCCAGGTTTGGCTGCCACCTCCCCTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PTSPKQRRCTTL*APGLAATSPAT Trigger: AGTGGCAGGGGAGGTGGCAGCCAAACCTGGCGCCAACAAGGTTGTGCACCGCCTCTGCTTCGGAGATGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| CDS-3UTR TCA 90 bp | AGCAGCACAGCAGGTGGCCCTGCCTCAGTGGTGAATGGTCTGAACCAGCCTACCGAGTTCTGGTTCCTCTaGGAGCCCAGCCAAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSTAGGPASVVNGLNQPTEFWFL*EPSQEE Trigger: TTCTTCTTGGCTGGGCTCTCAGAGGAACCAGAACTC...GGTAGGCTGGTTCAGACCATTCACCACTGAGGCAGGGCCACCTGCTGTGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR CAA 72 bp | CCTCTACCATTCCCAGACCCCAATTTGGGCGCCAAATaGTTGGGGCCGGCCTGTGGCTCTTATATCCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLPFPDPNLGAK*LGPACGSYIRV Trigger: AACCCGGATATAAGAGCCACAGGCCGGCCCCAACAATTTGGCGCCCAAATTGGGGTCTGGGAATGGTAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| CDS-3UTR TCA 90 bp | ACAAGAAGCAGCACAGCAGGTGGCCCTGCCTCAGTGGTGAATGGTCTGAACCAGGAGTTCTGGTTCCTCTaGGAGCCCAGCCAAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TRSSTAGGPASVVNGLNQEFWFL*EPSQEE Trigger: TTCTTCTTGGCTGGGCTCTCAGAGGAACCAGAACTC...CTGGTTCAGACCATTCACCACTGAGGCAGGGCCACCTGCTGTGCTGCTTCTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| CDS-3UTR CCA 90 bp | AGCAGCACAGCAGGTGGCCCTGCCTCAGTGGTGAATGGTCTGAACCAGCCTACCGCAACAGCAGAGATGTaGGAACTGCAAGTACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSTAGGPASVVNGLNQPTATAEM*ELQVLK Trigger: CTTCAGTACTTGCAGTTCCCACATCTCTGCTGTTGC...GGTAGGCTGGTTCAGACCATTCACCACTGAGGCAGGGCCACCTGCTGTGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR CAA 72 bp | ATTGTTGGGGCCGGCCTGTGGCTCTTATATCCGGGTTaGAGCCTGGGAGGCATCTTGGAGCTGAAAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IVGAGLWLLYPG*SLGGILELKEK Trigger: CTTCTCTTTCAGCTCCAAGATGCCTCCCAGGCTCAAACCCGGATATAAGAGCCACAGGCCGGCCCCAACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| CDS-3UTR CCA 90 bp | CACCTTGGCCTTCTTCTCAGGCACAAGAGGCTGAAAGCGGCCCAATCTGTTGTGAGGAAGAGTGGCAGCTaGAGTTCTGGTTCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HLGLLLRHKRLKAAQSVVRKSGS*SSGSSE Trigger: CTCAGAGGAACCAGAACTCCAGCTGCCACTCTTCCT...CACAACAGATTGGGCCGCTTTCAGCCTCTTGTGCCTGAGAAGAAGGCCAAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR CAA 72 bp | ATTGTTGGGGCCGGCCTGTGGCTCTTATATCCGGGTTaGAGCCTGGGAGGCATCTTGGAGCAAATTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: IVGAGLWLLYPG*SLGGILEQIHS Trigger: ACTGTGAATTTGCTCCAAGATGCCTCCCAGGCTCAAACCCGGATATAAGAGCCACAGGCCGGCCCCAACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213507.2 |
||
| CDS-3UTR TCA 90 bp | TTTCCAGCAGGGGCCCTCCTGCTGTGCCTGATCCCGGCTAAAGCATGTGACCAGATGGCTGTAAGTATGTaGATGCAGCAGAACCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: FPAGALLLCLIPAKACDQMAVSM*MQQNHR Trigger: TCTATGGTTCTGCTGCATTCACATACTTACAGCCAT...CTGGTCACATGCTTTAGCCGGGATCAGGCACAGCAGGAGGGCCCCTGCTGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| CDS-3UTR CCA 90 bp | TTTCCAGCAGGGGCCCTCCTGCTGTGCCTGATCCCGGCTAAAGCATGTGACCAGGAGGACACTTTCCCTTaGTCTATCAAACTCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FPAGALLLCLIPAKACDQEDTFP*SIKLTD Trigger: ATCAGTGAGTTTGATAGACCAAGGGAAAGTGTCCTC...CTGGTCACATGCTTTAGCCGGGATCAGGCACAGCAGGAGGGCCCCTGCTGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| CDS-3UTR TCA 90 bp | CCCCAATTTGGGCGCCAAATTGTTGGGGCCGGCCTGTGGCTCTTATATCCGGGTATGGCTGTAAGTATGTaGATGCAGCAGAACCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: PQFGRQIVGAGLWLLYPGMAVSM*MQQNHR Trigger: TCTATGGTTCTGCTGCATTCACATACTTACAGCCAT...ACCCGGATATAAGAGCCACAGGCCGGCCCCAACAATTTGGCGCCCAAATTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| CDS-3UTR CCA 90 bp | CCCCAATTTGGGCGCCAAATTGTTGGGGCCGGCCTGTGGCTCTTATATCCGGGTGAGGACACTTTCCCTTaGTCTATCAAACTCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PQFGRQIVGAGLWLLYPGEDTFP*SIKLTD Trigger: ATCAGTGAGTTTGATAGACCAAGGGAAAGTGTCCTC...ACCCGGATATAAGAGCCACAGGCCGGCCCCAACAATTTGGCGCCCAAATTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
||
| 3UTR CAA 72 bp | GTTCCAGCTCAGACCGTACCACACCTAGCAACCTTTTaGCCCGTTGCTTCTCGGGTTCCAGTACGAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPAQTVPHLATF*PVASRVPVRNF Trigger: GAAATTTCGTACTGGAACCCGAGAAGCAACGGGCAAAAAGGTTGCTAGGTGTGGTACGGTCTGAGCTGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR TCA 90 bp | CCTAGCAACCTTTTTGCCCGTTGCTTCTCGGGTTCCAGTACGAAATTTCTATCTGAGTTCTGGTTCCTCTaGGAGCCCAGCCAAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSNLFARCFSGSSTKFLSEFWFL*EPSQEE Trigger: TTCTTCTTGGCTGGGCTCTCAGAGGAACCAGAACTC...AGATAGAAATTTCGTACTGGAACCCGAGAAGCAACGGGCAAAAAGGTTGCTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR GCA 90 bp | CACCTTGGCCTTCTTCTCAGGCACAAGAGGCTGAAAGCGGCCCAATCTGTTGTGGCCTGTGTTTACAGATaGACAGATCACAGCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HLGLLLRHKRLKAAQSVVACVYR*TDHSKN Trigger: ATTTTTGCTGTGATCTGTGCATCTGTAAACACAGGC...CACAACAGATTGGGCCGCTTTCAGCCTCTTGTGCCTGAGAAGAAGGCCAAGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR CCA 90 bp | CCTAGCAACCTTTTTGCCCGTTGCTTCTCGGGTTCCAGTACGAAATTTCTATCTAGGAAGAGTGGCAGCTaGAGTTCTGGTTCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSNLFARCFSGSSTKFLSRKSGS*SSGSSE Trigger: CTCAGAGGAACCAGAACTCCAGCTGCCACTCTTCCT...AGATAGAAATTTCGTACTGGAACCCGAGAAGCAACGGGCAAAAAGGTTGCTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR CCA 90 bp | TCTATAGGAGTGAAAGGAATACAGTCCACTTATTTGCGAGAGAGCAGGGGTTTCGAAGAGCAGGAAGAGTaGCAGCTGGAGTTCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SIGVKGIQSTYLRESRGFEEQEE*QLEFWF Trigger: GAACCAGAACTCCAGCTGCCACTCTTCCTGCTCTTC...GAAACCCCTGCTCTCTCGCAAATAAGTGGACTGTATTCCTTTCACTCCTATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR TCA 90 bp | AAGACTGCTGGGAGTAAGCAGCTTTTGGAAGATGGAGGGAAGAGTTTTCCTGGTTCAGATATATTCCTGTaGAGAGCAGGAAGAGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KTAGSKQLLEDGGKSFPGSDIFL*RAGRVA Trigger: TGCCACTCTTCCTGCTCTTCACAGGAATATATCTGA...ACCAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR CAA 72 bp | GGCTCTATAGGAGTGAAAGGAATACAGTCCACTTATTaGCGAGAGAGCAGGGGTTTCATGGAAATGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSIGVKGIQSTY*RESRGFMEMAG Trigger: TCCAGCCATTTCCATGAAACCCCTGCTCTCTCGCAAATAAGTGGACTGTATTCCTTTCACTCCTATAGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR TCA 90 bp | AAGACTGCTGGGAGTAAGCAGCTTTTGGAAGATGGAGGGAAGAGTTTTCCTGGTATGGCTGTAAGTATGTaGATGCAGCAGAACCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTAGSKQLLEDGGKSFPGMAVSM*MQQNHR Trigger: TCTATGGTTCTGCTGCATTCACATACTTACAGCCAT...ACCAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR CCA 90 bp | GAGCCACACTCTTCCATCCACAACACTAACTTCCTGTTTAAAAAGAGAGAACATAGGAAGAGTGGCAGCTaGAGTTCTGGTTCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EPHSSIHNTNFLFKKREHRKSGS*SSGSSE Trigger: CTCAGAGGAACCAGAACTCCAGCTGCCACTCTTCCT...ATGTTCTCTCTTTTTAAACAGGAAGTTAGTGTTGTGGATGGAAGAGTGTGGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR CCA 90 bp | AAGACTGCTGGGAGTAAGCAGCTTTTGGAAGATGGAGGGAAGAGTTTTCCTGGTGAGGACACTTTCCCTTaGTCTATCAAACTCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KTAGSKQLLEDGGKSFPGEDTFP*SIKLTD Trigger: ATCAGTGAGTTTGATAGACCAAGGGAAAGTGTCCTC...ACCAGGAAAACTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR CAA 72 bp | TTGAGCCTGGGAGGCATCTTGGAGCAAATTCACAGTTaGCAGTTAACTCCGGAAAATCTTGGAGAACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLGGILEQIHS*QLTPENLGEPV Trigger: AACAGGTTCTCCAAGATTTTCCGGAGTTAACTGCAAACTGTGAATTTGCTCCAAGATGCCTCCCAGGCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213507.2 |
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| CDS-3UTR TCA 90 bp | CCTAGCAACCTTTTTGCCCGTTGCTTCTCGGGTTCCAGTACGAAATTTCTATCTCACAGAAATAGTGGCTaGTCACATCTGATTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSNLFARCFSGSSTKFLSHRNSG*SHLICR Trigger: TCTGCAAATCAGATGTGATCAGCCACTATTTCTGTG...AGATAGAAATTTCGTACTGGAACCCGAGAAGCAACGGGCAAAAAGGTTGCTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR CCA 90 bp | GATGGAGAAATAGGGACATTCACGATTATTGAGAAGAGAGTCAGTCTTTCTATGAGGAAGAGTGGCAGCTaGAGTTCTGGTTCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DGEIGTFTIIEKRVSLSMRKSGS*SSGSSE Trigger: CTCAGAGGAACCAGAACTCCAGCTGCCACTCTTCCT...CATAGAAAGACTGACTCTCTTCTCAATAATCGTGAATGTCCCTATTTCTCCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR GCA 90 bp | CCTAGCAACCTTTTTGCCCGTTGCTTCTCGGGTTCCAGTACGAAATTTCTATCTGCCTGTGTTTACAGATaGACAGATCACAGCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSNLFARCFSGSSTKFLSACVYR*TDHSKN Trigger: ATTTTTGCTGTGATCTGTGCATCTGTAAACACAGGC...AGATAGAAATTTCGTACTGGAACCCGAGAAGCAACGGGCAAAAAGGTTGCTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR CCA 90 bp | GAGCCACACTCTTCCATCCACAACACTAACTTCCTGTTTAAAAAGAGAGAACATGCAACAGCAGAGATGTaGGAACTGCAAGTACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EPHSSIHNTNFLFKKREHATAEM*ELQVLK Trigger: CTTCAGTACTTGCAGTTCCCACATCTCTGCTGTTGC...ATGTTCTCTCTTTTTAAACAGGAAGTTAGTGTTGTGGATGGAAGAGTGTGGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR GCA 90 bp | TCTATAGGAGTGAAAGGAATACAGTCCACTTATTTGCGAGAGAGCAGGGGTTTCGCCTGTGTTTACAGATaGACAGATCACAGCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SIGVKGIQSTYLRESRGFACVYR*TDHSKN Trigger: ATTTTTGCTGTGATCTGTGCATCTGTAAACACAGGC...GAAACCCCTGCTCTCTCGCAAATAAGTGGACTGTATTCCTTTCACTCCTATAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR CCA 90 bp | ATCCCGGCTAAAGCATGTGACCAGTTTCTTAGACAAAAACACAAAGAGGGTAGAGAGGACACTTTCCCTTaGTCTATCAAACTCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: IPAKACDQFLRQKHKEGREDTFP*SIKLTD Trigger: ATCAGTGAGTTTGATAGACCAAGGGAAAGTGTCCTC...TCTACCCTCTTTGTGTTTTTGTCTAAGAAACTGGTCACATGCTTTAGCCGGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR TCA 90 bp | GAGCCACACTCTTCCATCCACAACACTAACTTCCTGTTTAAAAAGAGAGAACATCACAGAAATAGTGGCTaGTCACATCTGATTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EPHSSIHNTNFLFKKREHHRNSG*SHLICR Trigger: TCTGCAAATCAGATGTGATCAGCCACTATTTCTGTG...ATGTTCTCTCTTTTTAAACAGGAAGTTAGTGTTGTGGATGGAAGAGTGTGGCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR GCA 90 bp | CGGCTAAAGCATGTGACCAGTTTCTTAGACAAAAACACAAAGAGGGTAGAGAACGCCTGTGTTTACAGATaGACAGATCACAGCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RLKHVTSFLDKNTKRVENACVYR*TDHSKN Trigger: ATTTTTGCTGTGATCTGTGCATCTGTAAACACAGGC...GTTCTCTACCCTCTTTGTGTTTTTGTCTAAGAAACTGGTCACATGCTTTAGCCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR CCA 90 bp | GTAAAATCCAAGGTGACAAGGGTACAAACCAGTTATTATATCCAGTTGCAACATGCAACAGCAGAGATGTaGGAACTGCAAGTACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VKSKVTRVQTSYYIQLQHATAEM*ELQVLK Trigger: CTTCAGTACTTGCAGTTCCCACATCTCTGCTGTTGC...ATGTTGCAACTGGATATAATAACTGGTTTGTACCCTTGTCACCTTGGATTTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR TCA 90 bp | GTAAAATCCAAGGTGACAAGGGTACAAACCAGTTATTATATCCAGTTGCAACATTCAGATATATTCCTGTaGAGAGCAGGAAGAGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VKSKVTRVQTSYYIQLQHSDIFL*RAGRVA Trigger: TGCCACTCTTCCTGCTCTTCACAGGAATATATCTGA...ATGTTGCAACTGGATATAATAACTGGTTTGTACCCTTGTCACCTTGGATTTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR TCA 90 bp | GATGGAGAAATAGGGACATTCACGATTATTGAGAAGAGAGTCAGTCTTTCTATGATGGCTGTAAGTATGTaGATGCAGCAGAACCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: DGEIGTFTIIEKRVSLSMMAVSM*MQQNHR Trigger: TCTATGGTTCTGCTGCATTCACATACTTACAGCCAT...CATAGAAAGACTGACTCTCTTCTCAATAATCGTGAATGTCCCTATTTCTCCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR TCA 90 bp | AGTAGTAAAATCCAAGGTGACAAGGGTACAAACCAGTTATTATATCCAGTTGCACACAGAAATAGTGGCTaGTCACATCTGATTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSKIQGDKGTNQLLYPVAHRNSG*SHLICR Trigger: TCTGCAAATCAGATGTGATCAGCCACTATTTCTGTG...TGCAACTGGATATAATAACTGGTTTGTACCCTTGTCACCTTGGATTTTACTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR CAA 72 bp | AACAGCGTTTTAGCAGAAACTAACCAAATTCACAGTTaGCAGTTAACTCCGGAAAATCTTGGAGAACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NSVLAETNQIHS*QLTPENLGEPV Trigger: AACAGGTTCTCCAAGATTTTCCGGAGTTAACTGCAAACTGTGAATTTGGTTAGTTTCTGCTAAAACGCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR CAA 72 bp | AACAGTATATTTTGTAAGGTACTGACTTTAAAGATGTaGGACTGCTTACAGCTAAGACTGCTGGGAGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NSIFCKVLTLKM*DCLQLRLLGVS Trigger: GCTTACTCCCAGCAGTCTTAGCTGTAAGCAGTCCAACATCTTTAAAGTCAGTACCTTACAAAATATACTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR GCA 90 bp | AGTAGTAAAATCCAAGGTGACAAGGGTACAAACCAGTTATTATATCCAGTTGCAATAGATATCAGAACATaGAAGCTTCAAGAGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSKIQGDKGTNQLLYPVAIDIRT*KLQEGK Trigger: CTTCCCCTCTTGAAGCTTGCATGTTCTGATATCTAT...TGCAACTGGATATAATAACTGGTTTGTACCCTTGTCACCTTGGATTTTACTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR CAA 72 bp | GTCAGAAGTGAGAAAAGCCAATCTGAATCAGTTCTATaGGTGAGAATTTTTGAGCAAGACACCAGAGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VRSEKSQSESVL*VRIFEQDTRVK Trigger: TTTAACTCTGGTGTCTTGCTCAAAAATTCTCACCAATAGAACTGATTCAGATTGGCTTTTCTCACTTCTGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| 3UTR CAA 72 bp | GGAGACAGAAGATTATTACAATTTGCTAGTGTTAGTTaGAGGACAAATTGGGCAATTCAGTCAGAAGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GDRRLLQFASVS*RTNWAIQSEVR Trigger: TCTCACTTCTGACTGAATTGCCCAATTTGTCCTCAAACTAACACTAGCAAATTGTAATAATCTTCTGTCTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213176.3 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR CAA 90 bp | ACAAGAAGCAGCACAGCAGGTGGCCCTGCCTCAGTGGTGAATGGTCTGAACCAGCTGATCACATCTGATTaGCAGAACTTAATCCTACTC | + |
|
Preference number: 5 (lower is better) Translates to: TRSSTAGGPASVVNGLNQLITSD*QNLILL Trigger: GAGTAGGATTAAGTTCTGCAAATCAGATGTGATCAG...CTGGTTCAGACCATTCACCACTGAGGCAGGGCCACCTGCTGTGCTGCTTCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR CAA 90 bp | AGAGATGGAATAACTGATTGTGGGGCGAAGAGCCACACTCTTCCATCCACAACACTGATCACATCTGATTaGCAGAACTTAATCCTACTC | + |
|
Preference number: 5 (lower is better) Translates to: RDGITDCGAKSHTLPSTTLITSD*QNLILL Trigger: GAGTAGGATTAAGTTCTGCAAATCAGATGTGATCAG...TGTTGTGGATGGAAGAGTGTGGCTCTTCGCCCCACAATCAGTTATTCCATCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR CAA 90 bp | CCTTTTTGCCCGTTGCTTCTCGGGTTCCAGTACGAAATTTCTATCTGTGAAGTTCTGATCACATCTGATTaGCAGAACTTAATCCTACTC | + |
|
Preference number: 5 (lower is better) Translates to: PFCPLLLGFQYEISICEVLITSD*QNLILL Trigger: GAGTAGGATTAAGTTCTGCAAATCAGATGTGATCAG...AACTTCACAGATAGAAATTTCGTACTGGAACCCGAGAAGCAACGGGCAAAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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| CDS-3UTR CAA 90 bp | CGGCTAAAGCATGTGACCAGTTTCTTAGACAAAAACACAAAGAGGGTAGAGAACCTGATCACATCTGATTaGCAGAACTTAATCCTACTC | + |
|
Preference number: 5 (lower is better) Translates to: RLKHVTSFLDKNTKRVENLITSD*QNLILL Trigger: GAGTAGGATTAAGTTCTGCAAATCAGATGTGATCAG...GTTCTCTACCCTCTTTGTGTTTTTGTCTAAGAAACTGGTCACATGCTTTAGCCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213176.3 ENSMUST00000213507.2 ENSMUST00000213830.3 ENSMUST00000215770.3 |
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