Pregenerated sensors for OLFR94 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043827Ensembl transcript IDs: ENSMUST00000055324.8, ENSMUST00000222190.2
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTACTAACCCAGAACTCACGGAGCACAAAACTTGCAGATCCTTATaGACAGACAAAAATTATGAGCATCCTATTTCCAGGACTCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: ATNPELTEHKTCRSL*TDKNYEHPISRTLS Trigger: GCTCAGAGTCCTGGAAATAGGATGCTCATAATTTTTGTCTGTGCATAAGGATCTGCAAGTTTTGTGCTCCGTGAGTTCTGGGTTAGTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222190.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGGTCAGCACCAGGGTGCTCATCATCTTATCTCCAGGTGGATTCTTCAGGGCACGGAGCACAAAACTTaGAGATCCTTATGCACAGAC | + |
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Preference number: 2 (lower is better) Translates to: KGQHQGAHHLISRWILQGTEHKT*RSLCTD Trigger: GTCTGTGCATAAGGATCTGCAAGTTTTGTGCTCCGT...GCCCTGAAGAATCCACCTGGAGATAAGATGATGAGCACCCTGGTGCTGACCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222190.2 |
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| 3UTR CCA 72 bp | GGTCAGCACCAGGGTGCTCATCATCTTATCTCCAGGTaGATTCTTCAGGGCTGGTACAAAGTCTCCTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: GQHQGAHHLISR*ILQGWYKVSSE Trigger: CTCTGAGGAGACTTTGTACCAGCCCTGAAGAATCCACCTGGAGATAAGATGATGAGCACCCTGGTGCTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222190.2 |
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| 3UTR GCA 72 bp | CTCGCTACTAACCCAGAACTCACGGAGCACAAAACTTaGAGATCCTTATGCACAGACAAAAATTATGAGCAT | + |
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Preference number: 3 (lower is better) Translates to: LATNPELTEHKT*RSLCTDKNYEH Trigger: ATGCTCATAATTTTTGTCTGTGCATAAGGATCTGCAAGTTTTGTGCTCCGTGAGTTCTGGGTTAGTAGCGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222190.2 |
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| CDS-3UTR TCA 90 bp | TCTGACCCCCTCCTGCATCCTGCTTCCCTCCTTACTGAGAGTCCCAAGAGCCATGAGAGGGCCAGTCGCTaGAACCCAGCAGTAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: SDPLLHPASLLTESPKSHERASR*NPAVGS Trigger: GCTTCCTACTGCTGGGTTTCAGCGACTGGCCCTCTC...ATGGCTCTTGGGACTCTCAGTAAGGAGGGAAGCAGGATGCAGGAGGGGGTCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222190.2 |
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| CDS-3UTR GCA 90 bp | TGCACAGACAAAAATTATGAGCATCCTATTTCCAGGACTCTGAGCCCTTCTCAGGTCCAGACAGCGGGGTaGGCACAGGGGACGCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: CTDKNYEHPISRTLSPSQVQTAG*AQGTRG Trigger: GCCGCGCGTCCCCTGTGCGCACCCCGCTGTCTGGAC...CTGAGAAGGGCTCAGAGTCCTGGAAATAGGATGCTCATAATTTTTGTCTGTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS-3UTR GCA 90 bp | GGGTGCTCATCATCTTATCTCCAGGTGGATTCTTCAGGGCTGGTACAAAGTCTCGCGAAGAGGACAGGCTaGAGAGAGGGCCAGTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: GCSSSYLQVDSSGLVQSLAKRTG*REGQSL Trigger: CAGCGACTGGCCCTCTCTGCAGCCTGTCCTCTTCGC...GAGACTTTGTACCAGCCCTGAAGAATCCACCTGGAGATAAGATGATGAGCACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222190.2 |
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| CDS-3UTR GCA 90 bp | CGGAGCACAAAACTTGCAGATCCTTATGCACAGACAAAAATTATGAGCATCCTAGTCCAGACAGCGGGGTaGGCACAGGGGACGCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSTKLADPYAQTKIMSILVQTAG*AQGTRG Trigger: GCCGCGCGTCCCCTGTGCGCACCCCGCTGTCTGGAC...TAGGATGCTCATAATTTTTGTCTGTGCATAAGGATCTGCAAGTTTTGTGCTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS-3UTR CCA 90 bp | TGCACAGACAAAAATTATGAGCATCCTATTTCCAGGACTCTGAGCCCTTCTCAGTCCGCCAGCCAGAGCTaGAGTGCATGCCCCAGACCG | + |
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Preference number: 4 (lower is better) Translates to: CTDKNYEHPISRTLSPSQSASQS*SACPRP Trigger: CGGTCTGGGGCATGCACTCCAGCTCTGGCTGGCGGA...CTGAGAAGGGCTCAGAGTCCTGGAAATAGGATGCTCATAATTTTTGTCTGTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS-3UTR GCA 90 bp | AGATCCTTATGCACAGACAAAAATTATGAGCATCCTATTTCCAGGACTCTGAGCCAGAGCTGGAGTGCATaGCCCAGACCGCGCGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: RSLCTDKNYEHPISRTLSQSWSA*PRPRGP Trigger: TGGGCCGCGCGGTCTGGGGCATGCACTCCAGCTCTG...GCTCAGAGTCCTGGAAATAGGATGCTCATAATTTTTGTCTGTGCATAAGGATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS-3UTR GCA 90 bp | AACTCACGGAGCACAAAACTTGCAGATCCTTATGCACAGACAAAAATTATGAGCCAGAGCTGGAGTGCATaGCCCAGACCGCGCGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: NSRSTKLADPYAQTKIMSQSWSA*PRPRGP Trigger: TGGGCCGCGCGGTCTGGGGCATGCACTCCAGCTCTG...GCTCATAATTTTTGTCTGTGCATAAGGATCTGCAAGTTTTGTGCTCCGTGAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222190.2 |
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| CDS-3UTR GCA 90 bp | TCCCTCCTTACTGAGAGTCCCAAGAGCCATTTACCACATCACCATTTAAGAGTGCCGCAAGAGCCTCAGTaGCGCCCCCTTCACTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SLLTESPKSHLPHHHLRVPQEPQ*RPLHFL Trigger: AAGGAAGTGAAGGGGGCGGCACTGAGGCTCTTGCGG...CACTCTTAAATGGTGATGTGGTAAATGGCTCTTGGGACTCTCAGTAAGGAGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222190.2 |
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| CDS-3UTR CCA 90 bp | ACGGAGCACAAAACTTGCAGATCCTTATGCACAGACAAAAATTATGAGCATCCTGGCGAGGGTCGCGAATaGCCAGCAGCACCAACGCCG | + |
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Preference number: 4 (lower is better) Translates to: TEHKTCRSLCTDKNYEHPGEGRE*PAAPTP Trigger: CGGCGTTGGTGCTGCTGGCCATTCGCGACCCTCGCC...AGGATGCTCATAATTTTTGTCTGTGCATAAGGATCTGCAAGTTTTGTGCTCCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS-3UTR CCA 90 bp | CTTGCAGATCCTTATGCACAGACAAAAATTATGAGCATCCTATTTCCAGGACTCTTGAGCCGCGCAGGCTaGCCAGCAGCGGTGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: LADPYAQTKIMSILFPGLLSRAG*PAAVAP Trigger: TGGTGCCACCGCTGCTGGCCAGCCTGCGCGGCTCAA...GAGTCCTGGAAATAGGATGCTCATAATTTTTGTCTGTGCATAAGGATCTGCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS-3UTR CCA 90 bp | CAGAACTCACGGAGCACAAAACTTGCAGATCCTTATGCACAGACAAAAATTATGTTGAGCCGCGCAGGCTaGCCAGCAGCGGTGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: QNSRSTKLADPYAQTKIMLSRAG*PAAVAP Trigger: TGGTGCCACCGCTGCTGGCCAGCCTGCGCGGCTCAA...CATAATTTTTGTCTGTGCATAAGGATCTGCAAGTTTTGTGCTCCGTGAGTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222190.2 |
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| CDS-3UTR GCA 90 bp | ACGGAGCACAAAACTTGCAGATCCTTATGCACAGACAAAAATTATGAGCATCCTCAGTGTTGCGGGCCTTaGGCTGGGAGGCAAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TEHKTCRSLCTDKNYEHPQCCGP*AGRQRP Trigger: TGGCCTTTGCCTCCCAGCGCAAGGCCCGCAACACTG...AGGATGCTCATAATTTTTGTCTGTGCATAAGGATCTGCAAGTTTTGTGCTCCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055324.8 |
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| CDS-3UTR GCA 90 bp | AGATCCTTATGCACAGACAAAAATTATGAGCATCCTATTTCCAGGACTCTGAGCGCGAAGAGGACAGGCTaGAGAGAGGGCCAGTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSLCTDKNYEHPISRTLSAKRTG*REGQSL Trigger: CAGCGACTGGCCCTCTCTGCAGCCTGTCCTCTTCGC...GCTCAGAGTCCTGGAAATAGGATGCTCATAATTTTTGTCTGTGCATAAGGATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS-3UTR GCA 90 bp | TCCTTATGCACAGACAAAAATTATGAGCATCCTATTTCCAGGACTCTGAGCCCTCCGCAAGAGCCTCAGTaGCGCCCCCTTCACTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLCTDKNYEHPISRTLSPPQEPQ*RPLHFL Trigger: AAGGAAGTGAAGGGGGCGGCACTGAGGCTCTTGCGG...AGGGCTCAGAGTCCTGGAAATAGGATGCTCATAATTTTTGTCTGTGCATAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS-3UTR CCA 90 bp | AAACTTGCAGATCCTTATGCACAGACAAAAATTATGAGCATCCTATTTCCAGGAGGCGAGGGTCGCGAATaGCCAGCAGCACCAACGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KLADPYAQTKIMSILFPGGEGRE*PAAPTP Trigger: CGGCGTTGGTGCTGCTGGCCATTCGCGACCCTCGCC...TCCTGGAAATAGGATGCTCATAATTTTTGTCTGTGCATAAGGATCTGCAAGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS-3UTR CCA 90 bp | ACTTGCAGATCCTTATGCACAGACAAAAATTATGAGCATCCTATTTCCAGGACTTCCGCCAGCCAGAGCTaGAGTGCATGCCCCAGACCG | + |
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Preference number: 4 (lower is better) Translates to: TCRSLCTDKNYEHPISRTSASQS*SACPRP Trigger: CGGTCTGGGGCATGCACTCCAGCTCTGGCTGGCGGA...AGTCCTGGAAATAGGATGCTCATAATTTTTGTCTGTGCATAAGGATCTGCAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS-3UTR TCA 90 bp | CGGAGCACAAAACTTGCAGATCCTTATGCACAGACAAAAATTATGAGCATCCTAGAGAGGGCCAGTCGCTaGAACCCAGCAGTAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSTKLADPYAQTKIMSILERASR*NPAVGS Trigger: GCTTCCTACTGCTGGGTTTCAGCGACTGGCCCTCTC...TAGGATGCTCATAATTTTTGTCTGTGCATAAGGATCTGCAAGTTTTGTGCTCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS-3UTR CCA 90 bp | TCGCTACTAACCCAGAACTCACGGAGCACAAAACTTGCAGATCCTTATGCACAGGCAGGTAGGTGTAGGTaGCAGAGCCATAAAATAGGC | + |
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Preference number: 4 (lower is better) Translates to: SLLTQNSRSTKLADPYAQAGRCR*QSHKIG Trigger: GCCTATTTTATGGCTCTGCCACCTACACCTACCTGC...CTGTGCATAAGGATCTGCAAGTTTTGTGCTCCGTGAGTTCTGGGTTAGTAGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222190.2 |
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| CDS-3UTR GCA 90 bp | ACAGACAAAAATTATGAGCATCCTATTTCCAGGACTCTGAGCCCTTCTCAGTTTAATGCTAGACAGTGTTaGGGGCCTTGCGCTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TDKNYEHPISRTLSPSQFNARQC*GPCAGR Trigger: CCTCCCAGCGCAAGGCCCGCAACACTGTCTAGCATT...AAACTGAGAAGGGCTCAGAGTCCTGGAAATAGGATGCTCATAATTTTTGTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055324.8 |
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| CDS-3UTR CCA 90 bp | CTTGCAGATCCTTATGCACAGACAAAAATTATGAGCATCCTATTTCCAGGACTCGCAGGTAGGTGTAGGTaGCAGAGCCATAAAATAGGC | + |
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Preference number: 4 (lower is better) Translates to: LADPYAQTKIMSILFPGLAGRCR*QSHKIG Trigger: GCCTATTTTATGGCTCTGCCACCTACACCTACCTGC...GAGTCCTGGAAATAGGATGCTCATAATTTTTGTCTGTGCATAAGGATCTGCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS-3UTR CCA 90 bp | AACTCACGGAGCACAAAACTTGCAGATCCTTATGCACAGACAAAAATTATGAGCGGTTGTAACTATGCGTaGGTTGCAGGTAGGTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: NSRSTKLADPYAQTKIMSGCNYA*VAGRCR Trigger: CCTACACCTACCTGCAACCCACGCATAGTTACAACC...GCTCATAATTTTTGTCTGTGCATAAGGATCTGCAAGTTTTGTGCTCCGTGAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222190.2 |
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| CDS-3UTR CCA 90 bp | GAGCACAAAACTTGCAGATCCTTATGCACAGACAAAAATTATGAGCATCCTATTGGTTGTAACTATGCGTaGGTTGCAGGTAGGTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: EHKTCRSLCTDKNYEHPIGCNYA*VAGRCR Trigger: CCTACACCTACCTGCAACCCACGCATAGTTACAACC...AATAGGATGCTCATAATTTTTGTCTGTGCATAAGGATCTGCAAGTTTTGTGCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS-3UTR GCA 90 bp | ACGGAGCACAAAACTTGCAGATCCTTATGCACAGACAAAAATTATGAGCATCCTGATAAACTCGGCACATaGCCAAGTTTTGGTTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: TEHKTCRSLCTDKNYEHPDKLGT*PSFGFV Trigger: AACAAAACCAAAACTTGGGCATGTGCCGAGTTTATC...AGGATGCTCATAATTTTTGTCTGTGCATAAGGATCTGCAAGTTTTGTGCTCCGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000055324.8 |
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| CDS-3UTR CCA 90 bp | ACTTGCAGATCCTTATGCACAGACAAAAATTATGAGCATCCTATTTCCAGGACTCACATGCCCAAGTTTTaGTTTTGTTACATAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: TCRSLCTDKNYEHPISRTHMPKF*FCYIAT Trigger: TGTGGCTATGTAACAAAACCAAAACTTGGGCATGTG...AGTCCTGGAAATAGGATGCTCATAATTTTTGTCTGTGCATAAGGATCTGCAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055324.8 |
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| CDS GCA 90 bp | AGACAGCGGGGTGCGCACAGGGGACGCGCGGCCAGCAGGGCGGTCTaGGCCGCGGAGTTGGCCAGGCCACCGAGCCAGGAGACTCCGGCC | + |
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Preference number: 5 (lower is better) Translates to: RQRGAHRGRAASRAV*AAELARPPSQETPA Trigger: GGCCGGAGTCTCCTGGCTCGGTGGCCTGGCCAACTCCGCGGCGCAGACCGCCCTGCTGGCCGCGCGTCCCCTGTGCGCACCCCGCTGTCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS CCA 90 bp | ACCGCCGAAGGCACCAACAGGATGACCACACGCGCGGCGAACATCTaGCGCTCGGTGGCGCTGCGGCCGCCGCGGCAGGCCAGCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TAEGTNRMTTRAANI*RSVALRPPRQASCS Trigger: GCTGCAGCTGGCCTGCCGCGGCGGCCGCAGCGCCACCGAGCGCCAGATGTTCGCCGCGCGTGTGGTCATCCTGTTGGTGCCTTCGGCGGT 73% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS GCA 90 bp | CCGCGGAGTTGGCCAGGCCACCGAGCCAGGAGACTCCGGCCAGCGTaGGGCACAGTAGCGGCGAGGCCAGTGAGGTGTAGCGCAGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: PRSWPGHRARRLRPA*GTVAARPVRCSAEG Trigger: ACCCTCTGCGCTACACCTCACTGGCCTCGCCGCTACTGTGCCGCACGCTGGCCGGAGTCTCCTGGCTCGGTGGCCTGGCCAACTCCGCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS TCA 90 bp | GGCGAGGGTCGCGAATGGCCAGCAGCACCAACGCCGCGTTGCCGGTaGGCGTTAGTAGGTAGCAGAGAAGGACCAGTGCGAAGAGGACAG | + |
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Preference number: 5 (lower is better) Translates to: GEGREWPAAPTPRCR*ALVGSREGPVRRGQ Trigger: CTGTCCTCTTCGCACTGGTCCTTCTCTGCTACCTACTAACGCTCACCGGCAACGCGGCGTTGGTGCTGCTGGCCATTCGCGACCCTCGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS-3UTR CAA 90 bp | TCCTTATGCACAGACAAAAATTATGAGCATCCTATTTCCAGGACTCTGAGCCCTGTCTGCGCCGCGGAGTaGGCCAGGCCACCGAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: SLCTDKNYEHPISRTLSPVCAAE*ARPPSQ Trigger: CTGGCTCGGTGGCCTGGCCAACTCCGCGGCGCAGAC...AGGGCTCAGAGTCCTGGAAATAGGATGCTCATAATTTTTGTCTGTGCATAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS-3UTR CAA 90 bp | CCAGAACTCACGGAGCACAAAACTTGCAGATCCTTATGCACAGACAAAAATTATGTCTGCGCCGCGGAGTaGGCCAGGCCACCGAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: PELTEHKTCRSLCTDKNYVCAAE*ARPPSQ Trigger: CTGGCTCGGTGGCCTGGCCAACTCCGCGGCGCAGAC...ATAATTTTTGTCTGTGCATAAGGATCTGCAAGTTTTGTGCTCCGTGAGTTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222190.2 |
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| CDS-3UTR CAA 90 bp | GGGTGCTCATCATCTTATCTCCAGGTGGATTCTTCAGGGCTGGTACAAAGTCTCGTAACTATGCGTGGGTaGCAGGTAGGTGTAGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: GCSSSYLQVDSSGLVQSLVTMRG*QVGVGG Trigger: GCCACCTACACCTACCTGCAACCCACGCATAGTTAC...GAGACTTTGTACCAGCCCTGAAGAATCCACCTGGAGATAAGATGATGAGCACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222190.2 |
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| CDS GCA 90 bp | GAAGGCGAGACAAAAATATTTAATGCTAGACAGTGTTGCGGGCCTTaGGCTGGGAGGCAAAGGCCAGAAATTTCTGTGAGTTCGAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: EGETKIFNARQCCGP*AGRQRPEISVSSRP Trigger: TGGCCTCGAACTCACAGAAATTTCTGGCCTTTGCCTCCCAGCGCAAGGCCCGCAACACTGTCTAGCATTAAATATTTTTGTCTCGCCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055324.8 |
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| CDS GCA 90 bp | GAAGGTTCGGAAGGCGAGACAAAAATATTTAATGCTAGACAGTGTTaGGGGCCTTGCGCTGGGAGGCAAAGGCCAGAAATTTCTGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: EGSEGETKIFNARQC*GPCAGRQRPEISVS Trigger: ACTCACAGAAATTTCTGGCCTTTGCCTCCCAGCGCAAGGCCCGCAACACTGTCTAGCATTAAATATTTTTGTCTCGCCTTCCGAACCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055324.8 |
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| CDS-3UTR CAA 90 bp | TTATGCACAGACAAAAATTATGAGCATCCTATTTCCAGGACTCTGAGCCCTTCTGTAACTATGCGTGGGTaGCAGGTAGGTGTAGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: LCTDKNYEHPISRTLSPSVTMRG*QVGVGG Trigger: GCCACCTACACCTACCTGCAACCCACGCATAGTTAC...AGAAGGGCTCAGAGTCCTGGAAATAGGATGCTCATAATTTTTGTCTGTGCATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS-3UTR CAA 90 bp | AGATCCTTATGCACAGACAAAAATTATGAGCATCCTATTTCCAGGACTCTGAGCGCACATGCCCAAGTTTaGGTTTTGTTACATAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: RSLCTDKNYEHPISRTLSAHAQV*VLLHSH Trigger: GTGGCTATGTAACAAAACCAAAACTTGGGCATGTGC...GCTCAGAGTCCTGGAAATAGGATGCTCATAATTTTTGTCTGTGCATAAGGATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055324.8 |
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| CDS GCA 72 bp | GGTGCGCACAGGGGACGCGCGGCCAGCAGGGCGGTCTaGGCCGCGGAGTTGGCCAGGCCACCGAGCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: GAHRGRAASRAV*AAELARPPSQE Trigger: CTCCTGGCTCGGTGGCCTGGCCAACTCCGCGGCGCAGACCGCCCTGCTGGCCGCGCGTCCCCTGTGCGCACC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS CAA 72 bp | GGACGCGCGGCCAGCAGGGCGGTCTGCGCCGCGGAGTaGGCCAGGCCACCGAGCCAGGAGACTCCGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GRAASRAVCAAE*ARPPSQETPAS Trigger: GCTGGCCGGAGTCTCCTGGCTCGGTGGCCTGGCCAACTCCGCGGCGCAGACCGCCCTGCTGGCCGCGCGTCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS CCA 72 bp | GGCACCAACAGGATGACCACACGCGCGGCGAACATCTaGCGCTCGGTGGCGCTGCGGCCGCCGCGGCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: GTNRMTTRAANI*RSVALRPPRQA Trigger: GGCCTGCCGCGGCGGCCGCAGCGCCACCGAGCGCCAGATGTTCGCCGCGCGTGTGGTCATCCTGTTGGTGCC 75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS GCA 72 bp | TGCTCGCCGCTTTCCGCCAGCCAGAGCTGGAGTGCATaGCCCAGACCGCGCGGCCCACGGCGATGTAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: CSPLSASQSWSA*PRPRGPRRCRR Trigger: CCTCCTACATCGCCGTGGGCCGCGCGGTCTGGGGCATGCACTCCAGCTCTGGCTGGCGGAAAGCGGCGAGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS CCA 72 bp | GCCAGCTGCAGCAGCGCCGGCAACTCGCAGATGAAATaGTCCAGACAGCGGGGTGCGCACAGGGGACGCGCG | + |
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Preference number: 6 (lower is better) Translates to: ASCSSAGNSQMK*SRQRGAHRGRA Trigger: CGCGCGTCCCCTGTGCGCACCCCGCTGTCTGGACCATTTCATCTGCGAGTTGCCGGCGCTGCTGCAGCTGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS TCA 72 bp | CGCGAATGGCCAGCAGCACCAACGCCGCGTTGCCGGTaGGCGTTAGTAGGTAGCAGAGAAGGACCAGTGCGA | + |
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Preference number: 6 (lower is better) Translates to: REWPAAPTPRCR*ALVGSREGPVR Trigger: TCGCACTGGTCCTTCTCTGCTACCTACTAACGCTCACCGGCAACGCGGCGTTGGTGCTGCTGGCCATTCGCG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS GCA 72 bp | AAAATAGGCAGACCGCGGTCAAGTGAGAGCCACATGTaGTCGCCGCTTTCCGCCAGCCAGAGCTGGAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: KIGRPRSSESHM*SPLSASQSWSA Trigger: TGCACTCCAGCTCTGGCTGGCGGAAAGCGGCGAGCACATGTGGCTCTCACTTGACCGCGGTCTGCCTATTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS CCA 72 bp | AGACGAATTTGCCACGGCCCTGGTTGTAACTATGCGTaGGTTGCAGGTAGGTGTAGGTGGCAGAGCCATAAA | + |
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Preference number: 6 (lower is better) Translates to: RRICHGPGCNYA*VAGRCRWQSHK Trigger: TTTATGGCTCTGCCACCTACACCTACCTGCAACCCACGCATAGTTACAACCAGGGCCGTGGCAAATTCGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055324.8 ENSMUST00000222190.2 |
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| CDS GCA 72 bp | GAAGGCGAGACAAAAATATTTAATGCTAGACAGTGTTaGGGGCCTTGCGCTGGGAGGCAAAGGCCAGAAATT | + |
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Preference number: 6 (lower is better) Translates to: EGETKIFNARQC*GPCAGRQRPEI Trigger: AATTTCTGGCCTTTGCCTCCCAGCGCAAGGCCCGCAACACTGTCTAGCATTAAATATTTTTGTCTCGCCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055324.8 |
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