Pregenerated sensors for OLFR930 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063221Ensembl transcript IDs: ENSMUST00000217208.3
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GTGCAAAATGCAGGGTGCTTTGAGATTAAACCTAGCACCCTAAATATATATACCTGCCCAGGAACAGAATaGAGAGGGGCAGCAGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: VQNAGCFEIKPSTLNIYTCPGTE*RGAAGA Trigger: AGCTCCTGCTGCCCCTCTTCATTCTGTTCCTGGGCA...GGTATATATATTTAGGGTGCTAGGTTTAATCTCAAAGCACCCTGCATTTTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217208.3 |
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| CDS-3UTR CCA 90 bp | GTGCAAAATGCAGGGTGCTTTGAGATTAAACCTAGCACCCTAAATATATATACCGGGAGTATGCAGCAGTaGGCTGACTGTGATGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: VQNAGCFEIKPSTLNIYTGSMQQ*ADCDEQ Trigger: CTGCTCATCACAGTCAGCCCACTGCTGCATACTCCC...GGTATATATATTTAGGGTGCTAGGTTTAATCTCAAAGCACCCTGCATTTTGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217208.3 |
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| CDS-3UTR TCA 90 bp | GTGCAAAATGCAGGGTGCTTTGAGATTAAACCTAGCACCCTAAATATATATACCGGAGGTAACCCTCAGTaGCCACAAAGACCGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VQNAGCFEIKPSTLNIYTGGNPQ*PQRPQR Trigger: TCTTTGCGGTCTTTGTGGTCACTGAGGGTTACCTCC...GGTATATATATTTAGGGTGCTAGGTTTAATCTCAAAGCACCCTGCATTTTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217208.3 |
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| CDS-3UTR GCA 90 bp | CCCCATGGTATAAGGATTGTGCAAAATGCAGGGTGCTTTGAGATTAAACCTAGCTTCTTACAGAGAATCTaGCCAGTGCTTTCTTCACAT | + |
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Preference number: 4 (lower is better) Translates to: PHGIRIVQNAGCFEIKPSFLQRI*PVLSSH Trigger: ATGTGAAGAAAGCACTGGGCAGATTCTCTGTAAGAA...GCTAGGTTTAATCTCAAAGCACCCTGCATTTTGCACAATCCTTATACCATGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217208.3 |
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| CDS-3UTR TCA 90 bp | ATTGTGCAAAATGCAGGGTGCTTTGAGATTAAACCTAGCACCCTAAATATATATTGCTCTTTGATGACTTaGTGTGACGGATGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IVQNAGCFEIKPSTLNIYCSLMT*CDGCCR Trigger: TCTGCAGCATCCGTCACATCAAGTCATCAAAGAGCA...ATATATATTTAGGGTGCTAGGTTTAATCTCAAAGCACCCTGCATTTTGCACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217208.3 |
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| CDS-3UTR GCA 90 bp | ATTGTGCAAAATGCAGGGTGCTTTGAGATTAAACCTAGCACCCTAAATATATATAACAAACACAACTGCTaGAGAATGATTCCCAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IVQNAGCFEIKPSTLNIYNKHNC*RMIPSG Trigger: GCCACTGGGAATCATTCTGCAGCAGTTGTGTTTGTT...ATATATATTTAGGGTGCTAGGTTTAATCTCAAAGCACCCTGCATTTTGCACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217208.3 |
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| CDS-3UTR GCA 90 bp | ATTGTGCAAAATGCAGGGTGCTTTGAGATTAAACCTAGCACCCTAAATATATATCAAAACAAACACAACTaGTGCAGAATGATTCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: IVQNAGCFEIKPSTLNIYQNKHN*CRMIPS Trigger: ACTGGGAATCATTCTGCAGCAGTTGTGTTTGTTTTG...ATATATATTTAGGGTGCTAGGTTTAATCTCAAAGCACCCTGCATTTTGCACAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217208.3 |
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| CDS-3UTR GCA 90 bp | ATTGTGCAAAATGCAGGGTGCTTTGAGATTAAACCTAGCACCCTAAATATATATAGAGAATCTGCCCAGTaGTTTCTTCACATCTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IVQNAGCFEIKPSTLNIYRESAQ*FLHIFV Trigger: AACAAAGATGTGAAGAAAGCACTGGGCAGATTCTCT...ATATATATTTAGGGTGCTAGGTTTAATCTCAAAGCACCCTGCATTTTGCACAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217208.3 |
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| CDS-3UTR CAA 90 bp | CCCCATGGTATAAGGATTGTGCAAAATGCAGGGTGCTTTGAGATTAAACCTAGCGTGGGCACCAAGGTGTaGATCCCTCCAATAATAAAT | + |
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Preference number: 5 (lower is better) Translates to: PHGIRIVQNAGCFEIKPSVGTKV*IPPIIN Trigger: ATTTATTATTGGAGGGATCAACACCTTGGTGCCCAC...GCTAGGTTTAATCTCAAAGCACCCTGCATTTTGCACAATCCTTATACCATGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217208.3 |
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| CDS-3UTR CAA 90 bp | CCCCATGGTATAAGGATTGTGCAAAATGCAGGGTGCTTTGAGATTAAACCTAGCGCTCCAGAGAGTTACTaGAAGAAGGCTTTAAATACA | + |
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Preference number: 5 (lower is better) Translates to: PHGIRIVQNAGCFEIKPSAPESY*KKALNT Trigger: TGTATTTAAAGCCTTCTTCAAGTAACTCTCTGGAGC...GCTAGGTTTAATCTCAAAGCACCCTGCATTTTGCACAATCCTTATACCATGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217208.3 |
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