Pregenerated sensors for OLFR924 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062103Ensembl transcript IDs: ENSMUST00000072977.5, ENSMUST00000217350.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTATGTGCCCACTTTCAGCACAGAACAGCATCTGTTGCTTCTCTTaGAGGTACTTGCATCGTACCACAGTCCCCATAAGTTCATATATG | + |
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Preference number: 1 (lower is better) Translates to: GMCPLSAQNSICCFS*RYLHRTTVPISSYM Trigger: CATATATGAACTTATGGGGACTGTGGTACGATGCAAGTACCTGCAAGAGAAGCAACAGATGCTGTTCTGTGCTGAAAGTGGGCACATACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR TCA 90 bp | GAGGAACTAAATAAGATTTCAGGCACTCAGGAACGAATTATCATGTaGCTGAGTCAGACACATGAATGCTGTGTCCAGACCCAAGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: EELNKISGTQERIIM*LSQTHECCVQTQAQ Trigger: CTGGGCTTGGGTCTGGACACAGCATTCATGTGTCTGACTCAGTCACATGATAATTCGTTCCTGAGTGCCTGAAATCTTATTTAGTTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR CCA 90 bp | ACTTACTGCGTAGCCCAAGGACTCAAATATGCAATTCTCATTCTTTaGCATCCAAGAGGTTGGATTGCACGTGGGCCCAAGTATTATGGT | + |
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Preference number: 1 (lower is better) Translates to: TYCVAQGLKYAILIL*HPRGWIARGPKYYG Trigger: ACCATAATACTTGGGCCCACGTGCAATCCAACCTCTTGGATGCCAAAGAATGAGAATTGCATATTTGAGTCCTTGGGCTACGCAGTAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR TCA 90 bp | AGTATGTGCCTGACTCAGTCACATGATAATGAGTTCCTGAGTGCCTaGGATGAGGAATACTCAAAGATGCCATTGAGTTCATTTTCCATT | + |
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Preference number: 1 (lower is better) Translates to: SMCLTQSHDNEFLSA*DEEYSKMPLSSFSI Trigger: AATGGAAAATGAACTCAATGGCATCTTTGAGTATTCCTCATCTCAGGCACTCAGGAACTCATTATCATGTGACTGAGTCAGGCACATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR GCA 90 bp | TTTATTTTGAGTAGAAACTTACTGCGTAGCCCAAGGACTCAAATATaGAATTCTCATTCTTTGGCATCCAAGAGGTTGGATTGCACGTGG | + |
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Preference number: 1 (lower is better) Translates to: FILSRNLLRSPRTQI*NSHSLASKRLDCTW Trigger: CCACGTGCAATCCAACCTCTTGGATGCCAAAGAATGAGAATTGCATATTTGAGTCCTTGGGCTACGCAGTAAGTTTCTACTCAAAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR CCA 90 bp | TGTATAACCAGTGATATGTCTTCATTAACGGCATCTCTTTTTACATaGACACAGCATACATTAGGATGTGGAATACAAGAGAAACTACTC | + |
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Preference number: 1 (lower is better) Translates to: CITSDMSSLTASLFT*TQHTLGCGIQEKLL Trigger: GAGTAGTTTCTCTTGTATTCCACATCCTAATGTATGCTGTGTCCATGTAAAAAGAGATGCCGTTAATGAAGACATATCACTGGTTATACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR CAA 90 bp | CCACTTTCAGCACAGAACAGCATCTGTTGCTTCTCTTGCAGGTACTaGCATCGTACCACAGTCCCCATAAGTTCATATATGACCCATTCC | + |
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Preference number: 2 (lower is better) Translates to: PLSAQNSICCFSCRY*HRTTVPISSYMTHS Trigger: GGAATGGGTCATATATGAACTTATGGGGACTGTGGTACGATGCAAGTACCTGCAAGAGAAGCAACAGATGCTGTTCTGTGCTGAAAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR CAA 90 bp | CACATGAATGCTGTGTCCAGACCCAAGCCCAGAAACCCTGTGCTCTaGATGATATTCCTTCAACAATGTATTCCGAGGTTTGTCACTCCA | + |
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Preference number: 2 (lower is better) Translates to: HMNAVSRPKPRNPVL*MIFLQQCIPRFVTP Trigger: TGGAGTGACAAACCTCGGAATACATTGTTGAAGGAATATCATCAAGAGCACAGGGTTTCTGGGCTTGGGTCTGGACACAGCATTCATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR CAA 90 bp | TGGTATGTGCCCACTTTCAGCACAGAACAGCATCTGTTGCTTCTCTaGCAGGTACTTGCATCGTACCACAGTCCCCATAAGTTCATATAT | + |
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Preference number: 2 (lower is better) Translates to: WYVPTFSTEQHLLLL*QVLASYHSPHKFIY Trigger: ATATATGAACTTATGGGGACTGTGGTACGATGCAAGTACCTGCAAGAGAAGCAACAGATGCTGTTCTGTGCTGAAAGTGGGCACATACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR CAA 90 bp | AACTTACTGCGTAGCCCAAGGACTCAAATATGCAATTCTCATTCTTaGGCATCCAAGAGGTTGGATTGCACGTGGGCCCAAGTATTATGG | + |
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Preference number: 2 (lower is better) Translates to: NLLRSPRTQICNSHS*ASKRLDCTWAQVLW Trigger: CCATAATACTTGGGCCCACGTGCAATCCAACCTCTTGGATGCCAAAGAATGAGAATTGCATATTTGAGTCCTTGGGCTACGCAGTAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR-3UTR GCA 90 bp | TTACTGCGTAGCCCAAGGACTCAAATATGCAATTCTCATTCTTTGGCATCCAAGAGGGATGGTGGTATGTaGCCACTTTCAGCACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: LLRSPRTQICNSHSLASKRDGGM*PLSAQN Trigger: GTTCTGTGCTGAAAGTGGGCACATACCACCATCCCT...CTTGGATGCCAAAGAATGAGAATTGCATATTTGAGTCCTTGGGCTACGCAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGACCCAAGCCCAGAAACCCTGTGCTCTTGATGATATTCCTTCAACAATGGAATGCTTTGTTGTATaGCTGTATCACTTCAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: VQTQAQKPCALDDIPSTMECFVV*LYHFSF Trigger: GAAACTGAAGTGATACAGTCATACAACAAAGCATTC...CATTGTTGAAGGAATATCATCAAGAGCACAGGGTTTCTGGGCTTGGGTCTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTCTCTGATTCACTCAGTTCCTCCTCATATCCCATTCCATCTGAATTCAACCATGATAATGAGTTCCTaGGTGCCTGAGATGAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: VSLIHSVPPHIPFHLNSTMIMSS*VPEMRN Trigger: ATTCCTCATCTCAGGCACTCAGGAACTCATTATCAT...GGTTGAATTCAGATGGAATGGGATATGAGGAGGAACTGAGTGAATCAGAGACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR-3UTR TCA 90 bp | TTACTGCGTAGCCCAAGGACTCAAATATGCAATTCTCATTCTTTGGCATCCAAGTGGCCCAAACATATTTaGACGACAGTTCTCTACTTC | + |
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Preference number: 2 (lower is better) Translates to: LLRSPRTQICNSHSLASKWPKHI*TTVLYF Trigger: GAAGTAGAGAACTGTCGTTCAAATATGTTTGGGCCA...CTTGGATGCCAAAGAATGAGAATTGCATATTTGAGTCCTTGGGCTACGCAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR-3UTR TCA 90 bp | CACTTTCAGCACAGAACAGCATCTGTTGCTTCTCTTGCAGGTACTTGCATCGTATTCATGATAACCTACTaGCAAATTCACATTGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: HFQHRTASVASLAGTCIVFMITY*QIHIAL Trigger: CAAGGCAATGTGAATTTGTCAGTAGGTTATCATGAA...TACGATGCAAGTACCTGCAAGAGAAGCAACAGATGCTGTTCTGTGCTGAAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR-3UTR CCA 90 bp | TTACTGCGTAGCCCAAGGACTCAAATATGCAATTCTCATTCTTTGGCATCCAAGCCTGACAAAACTGTCTaGGAAAAACAAGTATGTGCC | + |
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Preference number: 2 (lower is better) Translates to: LLRSPRTQICNSHSLASKPDKTV*EKQVCA Trigger: GGCACATACTTGTTTTTCCCAGACAGTTTTGTCAGG...CTTGGATGCCAAAGAATGAGAATTGCATATTTGAGTCCTTGGGCTACGCAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTAGAGATCTTCTCCATTACCTCAGGCCCTTATACTTTTCTGCATTTTCGTGACAACTATTTTCTCTaGAGGAAAGTAAGCATGCAA | + |
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Preference number: 2 (lower is better) Translates to: SLEIFSITSGPYTFLHFRDNYFL*RKVSMQ Trigger: TTGCATGCTTACTTTCCTCCAGAGAAAATAGTTGTC...ACGAAAATGCAGAAAAGTATAAGGGCCTGAGGTAATGGAGAAGATCTCTAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR-3UTR CCA 90 bp | TTACTGCGTAGCCCAAGGACTCAAATATGCAATTCTCATTCTTTGGCATCCAAGGCATACATTAGGATGTaGAATACAAGAGAAACTACT | + |
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Preference number: 2 (lower is better) Translates to: LLRSPRTQICNSHSLASKAYIRM*NTRETT Trigger: AGTAGTTTCTCTTGTATTCCACATCCTAATGTATGC...CTTGGATGCCAAAGAATGAGAATTGCATATTTGAGTCCTTGGGCTACGCAGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTAGAGATCTTCTCCATTACCTCAGGCCCTTATACTTTTCTGCATTTTCGTGCATCTCTTTTTACATaGACACAGCATACATTAGGA | + |
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Preference number: 2 (lower is better) Translates to: SLEIFSITSGPYTFLHFRASLFT*TQHTLG Trigger: TCCTAATGTATGCTGTGTCCATGTAAAAAGAGATGC...ACGAAAATGCAGAAAAGTATAAGGGCCTGAGGTAATGGAGAAGATCTCTAAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR GCA 72 bp | GGTATGTGCCCACTTTCAGCACAGAACAGCATCTGTTaGTTCTCTTGCAGGTACTTGCATCGTACCACAGTC | + |
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Preference number: 3 (lower is better) Translates to: GMCPLSAQNSIC*FSCRYLHRTTV Trigger: GACTGTGGTACGATGCAAGTACCTGCAAGAGAAGCAACAGATGCTGTTCTGTGCTGAAAGTGGGCACATACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR GCA 72 bp | CCACTTTCAGCACAGAACAGCATCTGTTGCTTCTCTTaGAGGTACTTGCATCGTACCACAGTCCCCATAAGT | + |
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Preference number: 3 (lower is better) Translates to: PLSAQNSICCFS*RYLHRTTVPIS Trigger: ACTTATGGGGACTGTGGTACGATGCAAGTACCTGCAAGAGAAGCAACAGATGCTGTTCTGTGCTGAAAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR CCA 72 bp | GTAGCCCAAGGACTCAAATATGCAATTCTCATTCTTTaGCATCCAAGAGGTTGGATTGCACGTGGGCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: VAQGLKYAILIL*HPRGWIARGPK Trigger: CTTGGGCCCACGTGCAATCCAACCTCTTGGATGCCAAAGAATGAGAATTGCATATTTGAGTCCTTGGGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR-3UTR CAA 90 bp | CACTTTCAGCACAGAACAGCATCTGTTGCTTCTCTTGCAGGTACTTGCATCGTAAGCTGCTGGAATGCTTaGTTGTATGACTGTATCACT | + |
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Preference number: 3 (lower is better) Translates to: HFQHRTASVASLAGTCIVSCWNA*LYDCIT Trigger: AGTGATACAGTCATACAACAAAGCATTCCAGCAGCT...TACGATGCAAGTACCTGCAAGAGAAGCAACAGATGCTGTTCTGTGCTGAAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTCTCTGATTCACTCAGTTCCTCCTCATATCCCATTCCATCTGAATTCAACCACAGAACAGCATCTGTaGCTTCTCTTGCAGGTACTT | + |
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Preference number: 3 (lower is better) Translates to: VSLIHSVPPHIPFHLNSTTEQHL*LLLQVL Trigger: AAGTACCTGCAAGAGAAGCAACAGATGCTGTTCTGT...GGTTGAATTCAGATGGAATGGGATATGAGGAGGAACTGAGTGAATCAGAGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR TCA 72 bp | CTGACTCAGTCACATGATAATGAGTTCCTGAGTGCCTaGGATGAGGAATACTCAAAGATGCCATTGAGTTCA | + |
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Preference number: 3 (lower is better) Translates to: LTQSHDNEFLSA*DEEYSKMPLSS Trigger: TGAACTCAATGGCATCTTTGAGTATTCCTCATCTCAGGCACTCAGGAACTCATTATCATGTGACTGAGTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR TCA 72 bp | AATAAGATTTCAGGCACTCAGGAACGAATTATCATGTaGCTGAGTCAGACACATGAATGCTGTGTCCAGACC | + |
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Preference number: 3 (lower is better) Translates to: NKISGTQERIIM*LSQTHECCVQT Trigger: GGTCTGGACACAGCATTCATGTGTCTGACTCAGTCACATGATAATTCGTTCCTGAGTGCCTGAAATCTTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR-3UTR CAA 90 bp | GTCACTCCAAAATTAGGCATAAATTTCCTCCCAATACTTCCTTCTCTCATGTGTCATCTGTTGCTTCTCTaGCAGGTACTTGCATCGTAC | + |
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Preference number: 3 (lower is better) Translates to: VTPKLGINFLPILPSLMCHLLLL*QVLASY Trigger: GTACGATGCAAGTACCTGCAAGAGAAGCAACAGATG...ACACATGAGAGAAGGAAGTATTGGGAGGAAATTTATGCCTAATTTTGGAGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCTTAGAGATCTTCTCCATTACCTCAGGCCCTTATACTTTTCTGCATTTTCGGATGACGTTGTCAAATaGAAGCATACATGGTTCAAG | + |
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Preference number: 3 (lower is better) Translates to: LLRDLLHYLRPLYFSAFSDDVVK*KHTWFK Trigger: CTTGAACCATGTATGCTTCAATTTGACAACGTCATC...CGAAAATGCAGAAAAGTATAAGGGCCTGAGGTAATGGAGAAGATCTCTAAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR-3UTR CAA 90 bp | TTACTGCGTAGCCCAAGGACTCAAATATGCAATTCTCATTCTTTGGCATCCAAGGACACATATACACATTaGGTTGTAGTCTCAAGAATC | + |
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Preference number: 3 (lower is better) Translates to: LLRSPRTQICNSHSLASKDTYTH*VVVSRI Trigger: GATTCTTGAGACTACAACCAAATGTGTATATGTGTC...CTTGGATGCCAAAGAATGAGAATTGCATATTTGAGTCCTTGGGCTACGCAGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR GCA 72 bp | TGCAATTCTCATTCTTTGGCATCCAAGAGGTTGGATTaGACGTGGGCCCAAGTATTATGGTTCTTTTTAAAA | + |
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Preference number: 3 (lower is better) Translates to: CNSHSLASKRLD*TWAQVLWFFLK Trigger: TTTTAAAAAGAACCATAATACTTGGGCCCACGTGCAATCCAACCTCTTGGATGCCAAAGAATGAGAATTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR CCA 72 bp | AAATATGCAATTCTCATTCTTTGGCATCCAAGAGGTTaGATTGCACGTGGGCCCAAGTATTATGGTTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: KYAILILWHPRG*IARGPKYYGSF Trigger: AAAAGAACCATAATACTTGGGCCCACGTGCAATCCAACCTCTTGGATGCCAAAGAATGAGAATTGCATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR-3UTR CAA 90 bp | GTCACTCCAAAATTAGGCATAAATTTCCTCCCAATACTTCCTTCTCTCATGTGTATTGTTCTGAGATTCTaGAAGCTGCTGGAATGCTTT | + |
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Preference number: 3 (lower is better) Translates to: VTPKLGINFLPILPSLMCIVLRF*KLLECF Trigger: AAAGCATTCCAGCAGCTTCAAGAATCTCAGAACAAT...ACACATGAGAGAAGGAAGTATTGGGAGGAAATTTATGCCTAATTTTGGAGTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR CCA 72 bp | TCTCATTCTTTGGCATCCAAGAGGTTGGATTGCACGTaGGCCCAAGTATTATGGTTCTTTTTAAAATTGTTT | + |
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Preference number: 3 (lower is better) Translates to: SHSLASKRLDCT*AQVLWFFLKLF Trigger: AAACAATTTTAAAAAGAACCATAATACTTGGGCCCACGTGCAATCCAACCTCTTGGATGCCAAAGAATGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR-3UTR CAA 90 bp | ACATGCAGACTACACTTAATCATAGTTTATTTACCCATTGAGACTCACTTGGAAGCCATTTCCATGCCATaGTCTTGTATAACCAGTGAT | + |
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Preference number: 3 (lower is better) Translates to: TCRLHLIIVYLPIETHLEAISMP*SCITSD Trigger: ATCACTGGTTATACAAGACAATGGCATGGAAATGGC...TTCCAAGTGAGTCTCAATGGGTAAATAAACTATGATTAAGTGTAGTCTGCATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR CCA 72 bp | AGTGATATGTCTTCATTAACGGCATCTCTTTTTACATaGACACAGCATACATTAGGATGTGGAATACAAGAG | + |
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Preference number: 3 (lower is better) Translates to: SDMSSLTASLFT*TQHTLGCGIQE Trigger: CTCTTGTATTCCACATCCTAATGTATGCTGTGTCCATGTAAAAAGAGATGCCGTTAATGAAGACATATCACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR TCA 72 bp | GGTCAACCTTCAAGAAGACCTTTCTTCAAACATAGTTaGTATTGTTGTCCAACCAATGATGTTGAGTTTTAT | + |
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Preference number: 3 (lower is better) Translates to: GQPSRRPFFKHS*YCCPTNDVEFY Trigger: ATAAAACTCAACATCATTGGTTGGACAACAATATCAACTATGTTTGAAGAAAGGTCTTCTTGAAGGTTGACC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR CAA 72 bp | CCCACTTTCAGCACAGAACAGCATCTGTTGCTTCTCTaGCAGGTACTTGCATCGTACCACAGTCCCCATAAG | + |
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Preference number: 4 (lower is better) Translates to: PTFSTEQHLLLL*QVLASYHSPHK Trigger: CTTATGGGGACTGTGGTACGATGCAAGTACCTGCAAGAGAAGCAACAGATGCTGTTCTGTGCTGAAAGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR CAA 72 bp | TGGTATGTGCCCACTTTCAGCACAGAACAGCATCTGTaGCTTCTCTTGCAGGTACTTGCATCGTACCACAGT | + |
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Preference number: 4 (lower is better) Translates to: WYVPTFSTEQHL*LLLQVLASYHS Trigger: ACTGTGGTACGATGCAAGTACCTGCAAGAGAAGCAACAGATGCTGTTCTGTGCTGAAAGTGGGCACATACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR CAA 72 bp | CGTAGCCCAAGGACTCAAATATGCAATTCTCATTCTTaGGCATCCAAGAGGTTGGATTGCACGTGGGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: RSPRTQICNSHS*ASKRLDCTWAQ Trigger: TTGGGCCCACGTGCAATCCAACCTCTTGGATGCCAAAGAATGAGAATTGCATATTTGAGTCCTTGGGCTACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| CDS-3UTR CCA 90 bp | CACTTTCAGCACAGAACAGCATCTGTTGCTTCTCTTGCAGGTACTTGCATCGTACCCACAGCCATAATGTaGGAGCTACAGGTGCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: HFQHRTASVASLAGTCIVPTAIM*ELQVPN Trigger: ATTTGGCACCTGTAGCTCCCACATTATGGCTGTGGG...TACGATGCAAGTACCTGCAAGAGAAGCAACAGATGCTGTTCTGTGCTGAAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| CDS-3UTR TCA 90 bp | GTGTCTCTGATTCACTCAGTTCCTCCTCATATCCCATTCCATCTGAATTCAACCCCCAAAGAAGCCCAGTaGGTATACCACAGCCATCAT | + |
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Preference number: 4 (lower is better) Translates to: VSLIHSVPPHIPFHLNSTPKEAQ*VYHSHH Trigger: ATGATGGCTGTGGTATACTCACTGGGCTTCTTTGGG...GGTTGAATTCAGATGGAATGGGATATGAGGAGGAACTGAGTGAATCAGAGACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR CAA 72 bp | GCACAGAACAGCATCTGTTGCTTCTCTTGCAGGTACTaGCATCGTACCACAGTCCCCATAAGTTCATATATG | + |
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Preference number: 4 (lower is better) Translates to: AQNSICCFSCRY*HRTTVPISSYM Trigger: CATATATGAACTTATGGGGACTGTGGTACGATGCAAGTACCTGCAAGAGAAGCAACAGATGCTGTTCTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| CDS-3UTR TCA 90 bp | GGAAAAACAAGTATGTGCCTGACTCAGTCACATGATAATGAGTTCCTGAGTGCCGTTGATATGGGTGCTTaGGCAAGACAGAGTCAACAA | + |
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Preference number: 4 (lower is better) Translates to: GKTSMCLTQSHDNEFLSAVDMGA*ARQSQQ Trigger: TTGTTGACTCTGTCTTGCTCAAGCACCCATATCAAC...GGCACTCAGGAACTCATTATCATGTGACTGAGTCAGGCACATACTTGTTTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| CDS-3UTR CCA 90 bp | TTACTGCGTAGCCCAAGGACTCAAATATGCAATTCTCATTCTTTGGCATCCAAGCCACAGCCATCATTATaGAACAGACCTTGTGGGACA | + |
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Preference number: 4 (lower is better) Translates to: LLRSPRTQICNSHSLASKPQPSL*NRPCGT Trigger: TGTCCCACAAGGTCTGTTCCATAATGATGGCTGTGG...CTTGGATGCCAAAGAATGAGAATTGCATATTTGAGTCCTTGGGCTACGCAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| CDS-3UTR TCA 90 bp | GTCACTCCAAAATTAGGCATAAATTTCCTCCCAATACTTCCTTCTCTCATGTGTACAGCAGTACCTCGTTaGTATGGGTGCTTGAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: VTPKLGINFLPILPSLMCTAVPR*YGCLSK Trigger: CTTGCTCAAGCACCCATATCAACGAGGTACTGCTGT...ACACATGAGAGAAGGAAGTATTGGGAGGAAATTTATGCCTAATTTTGGAGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| CDS-3UTR GCA 90 bp | GTCACTCCAAAATTAGGCATAAATTTCCTCCCAATACTTCCTTCTCTCATGTGTGACAGCCAGTGTAGGTaGAAGGGTATTAACTCCACC | + |
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Preference number: 4 (lower is better) Translates to: VTPKLGINFLPILPSLMCDSQCR*KGINST Trigger: GGTGGAGTTAATACCCTTGCACCTACACTGGCTGTC...ACACATGAGAGAAGGAAGTATTGGGAGGAAATTTATGCCTAATTTTGGAGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| CDS-3UTR GCA 90 bp | GGAGACAACTATTTTCTCTGGAGGAAAGTAAGCATGCAAAGAACCTATAAGAATTGTGGGAGCTACAGGTaGCAAATGCTTTGGAACGTC | + |
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Preference number: 4 (lower is better) Translates to: GDNYFLWRKVSMQRTYKNCGSYR*QMLWNV Trigger: GACGTTCCAAAGCATTTGGCACCTGTAGCTCCCACA...ATTCTTATAGGTTCTTTGCATGCTTACTTTCCTCCAGAGAAAATAGTTGTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| CDS-3UTR TCA 90 bp | GTCACTCCAAAATTAGGCATAAATTTCCTCCCAATACTTCCTTCTCTCATGTGTAGACCTTGTGGGACATaGCAATGTTATAAAGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: VTPKLGINFLPILPSLMCRPCGT*QCYKAV Trigger: CACTGCTTTATAACATTGTCATGTCCCACAAGGTCT...ACACATGAGAGAAGGAAGTATTGGGAGGAAATTTATGCCTAATTTTGGAGTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| CDS-3UTR TCA 90 bp | AAATCCCTGACAAAACTGTCTGGGAAAAACAAGTATGTGCCTGACTCAGTCACAATACATGAAAGTAATTaGCCCAAAGAAGATTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: KSLTKLSGKNKYVPDSVTIHESN*PKEDSH Trigger: GTGGGAATCTTCTTTGGGTCAATTACTTTCATGTAT...TGTGACTGAGTCAGGCACATACTTGTTTTTCCCAGACAGTTTTGTCAGGGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| CDS-3UTR CCA 90 bp | TTACTGCGTAGCCCAAGGACTCAAATATGCAATTCTCATTCTTTGGCATCCAAGAATGTTATAAAGCAGTaGGCTACAGATGGCAACATA | + |
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Preference number: 4 (lower is better) Translates to: LLRSPRTQICNSHSLASKNVIKQ*ATDGNI Trigger: TATGTTGCCATCTGTAGCCCACTGCTTTATAACATT...CTTGGATGCCAAAGAATGAGAATTGCATATTTGAGTCCTTGGGCTACGCAGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| 3UTR CAA 72 bp | ATGCAATTCTCATTCTTTGGCATCCAAGAGGTTGGATaGCACGTGGGCCCAAGTATTATGGTTCTTTTTAAA | + |
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Preference number: 4 (lower is better) Translates to: MQFSFFGIQEVG*HVGPSIMVLFK Trigger: TTTAAAAAGAACCATAATACTTGGGCCCACGTGCAATCCAACCTCTTGGATGCCAAAGAATGAGAATTGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| CDS-3UTR GCA 90 bp | TGTTCTGAGATTCTTGAAGCTGCTGGAATGCTTTGTTGTATGACTGTATCACTTAGTAAAGCTGAGTCATaGACTCCAAAAAGGAGATTG | + |
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Preference number: 4 (lower is better) Translates to: CSEILEAAGMLCCMTVSLSKAES*TPKRRL Trigger: CAATCTCCTTTTTGGAGTGCATGACTCAGCTTTACT...AAGTGATACAGTCATACAACAAAGCATTCCAGCAGCTTCAAGAATCTCAGAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| CDS-3UTR GCA 90 bp | TGTTCTGAGATTCTTGAAGCTGCTGGAATGCTTTGTTGTATGACTGTATCACTTTGTGATCACATATATTaGCAGAAACAAGAGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: CSEILEAAGMLCCMTVSLCDHIY*QKQEEQ Trigger: CTGTTCCTCTTGTTTCTGGCAATATATGTGATCACA...AAGTGATACAGTCATACAACAAAGCATTCCAGCAGCTTCAAGAATCTCAGAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| CDS TCA 90 bp | CATTGTCATACGGGTTGTATGGACAGTAGCCCCAAAGAAGCCCAGTaGGTATACCACAGCCATCATTATGGAACAGACCTTGTGGGACAT | + |
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Preference number: 5 (lower is better) Translates to: HCHTGCMDSSPKEAQ*VYHSHHYGTDLVGH Trigger: ATGTCCCACAAGGTCTGTTCCATAATGATGGCTGTGGTATACTCACTGGGCTTCTTTGGGGCTACTGTCCATACAACCCGTATGACAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072977.5 ENSMUST00000217350.2 |
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| CDS-3UTR CAA 90 bp | TTACTGCGTAGCCCAAGGACTCAAATATGCAATTCTCATTCTTTGGCATCCAAGACTCCAAAAAGGAGATaGTGTTCTTCTCACATACAA | + |
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Preference number: 5 (lower is better) Translates to: LLRSPRTQICNSHSLASKTPKRR*CSSHIQ Trigger: TTGTATGTGAGAAGAACACAATCTCCTTTTTGGAGT...CTTGGATGCCAAAGAATGAGAATTGCATATTTGAGTCCTTGGGCTACGCAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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| CDS-3UTR CAA 90 bp | ACATGCAGACTACACTTAATCATAGTTTATTTACCCATTGAGACTCACTTGGAAATTATGGAACAGACCTaGTGGGACATGACAATGTTA | + |
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Preference number: 5 (lower is better) Translates to: TCRLHLIIVYLPIETHLEIMEQT*WDMTML Trigger: TAACATTGTCATGTCCCACAAGGTCTGTTCCATAAT...TTCCAAGTGAGTCTCAATGGGTAAATAAACTATGATTAAGTGTAGTCTGCATGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217350.2 |
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