Pregenerated sensors for OLFR922 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043911Ensembl transcript IDs: ENSMUST00000051004.5, ENSMUST00000213164.2
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTTGGTGGTTGAGTCTCTGGGTGCCCCCAAGGGTCCAGGTTAGTTaGCTATCTTTGTCTTCCTGTAGTCTCTCTATCCCCTTCAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: AWWLSLWVPPRVQVS*LSLSSCSLSIPFRS Trigger: GGACCTGAAGGGGATAGAGAGACTACAGGAAGACAAAGATAGTCAACTAACCTGGACCCTTGGGGGCACCCAGAGACTCAACCACCAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| 3UTR TCA 90 bp | CCCCTTCAGGTCCCTCAGTCATTCCCCCAACTCTTCAACACTACCTaGGCTTGTGGGTCTTTGCATCTGTTTCTATCAGGTGCTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: PLQVPQSFPQLFNTT*ACGSLHLFLSGAVC Trigger: ACACACAGCACCTGATAGAAACAGATGCAAAGACCCACAAGCTCAGGTAGTGTTGAAGAGTTGGGGGAATGACTGAGGGACCTGAAGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| 3UTR GCA 90 bp | AGTCATTCCCCCAACTCTTCAACACTACCTGAGCTTGTGGGTCTTTaGATCTGTTTCTATCAGGTGCTGTGTGTAGCCTCTCAGAGGACA | + |
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Preference number: 1 (lower is better) Translates to: SHSPNSSTLPELVGL*ICFYQVLCVASQRT Trigger: TGTCCTCTGAGAGGCTACACACAGCACCTGATAGAAACAGATGCAAAGACCCACAAGCTCAGGTAGTGTTGAAGAGTTGGGGGAATGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| 3UTR GCA 90 bp | CATAACCCCTCATCCTCACCCTCCAAACCCTTTTTATCAAATCACTaGAGACTGGTCACATCCTCTCCACTAAGACCAGAACAGACAGCC | + |
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Preference number: 1 (lower is better) Translates to: HNPSSSPSKPFLSNH*RLVTSSPLRPEQTA Trigger: GGCTGTCTGTTCTGGTCTTAGTGGAGAGGATGTGACCAGTCTGCAGTGATTTGATAAAAAGGGTTTGGAGGGTGAGGATGAGGGGTTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| 3UTR TCA 90 bp | GAGCTCTGTCTCTGTTTCATCTTTTATGCAGGATACATTCTGGGTTaGAAGTTCAGTGAGTTGGTTTCCTTAGTTGAGTGGATACAAACT | + |
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Preference number: 1 (lower is better) Translates to: ELCLCFIFYAGYILG*KFSELVSLVEWIQT Trigger: AGTTTGTATCCACTCAACTAAGGAAACCAACTCACTGAACTTTCAACCCAGAATGTATCCTGCATAAAAGATGAAACAGAGACAGAGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| 3UTR CAA 90 bp | ACAGCCTCGTTAACAGAATATGATCCACAGGCAGGCAACAGAGAATaGGGTAGACCCAACTACGGCTATTCGGGGACCCTCATAAAAACC | + |
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Preference number: 2 (lower is better) Translates to: TASLTEYDPQAGNRE*GRPNYGYSGTLIKT Trigger: GGTTTTTATGAGGGTCCCCGAATAGCCGTAGTTGGGTCTACCCAATTCTCTGTTGCCTGCCTGTGGATCATATTCTGTTAACGAGGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCTCAGTCATTCCCCCAACTCTTCAACACTACCTGAGCTTGTGGGTCTTTGCACTGGTACTTATGCCTaGAAAGATGCTGCAATTACC | + |
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Preference number: 2 (lower is better) Translates to: SLSHSPNSSTLPELVGLCTGTYA*KDAAIT Trigger: GGTAATTGCAGCATCTTTTCAGGCATAAGTACCAGT...GCAAAGACCCACAAGCTCAGGTAGTGTTGAAGAGTTGGGGGAATGACTGAGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCCTGGACTCCCATCTTTACATAACCCCTCATCCTCACCCTCCAAACCCTTTATGCAGGATACATTCTaGGTTGAAAGTTCAGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: APGLPSLHNPSSSPSKPFMQDTF*VESSVS Trigger: ACTCACTGAACTTTCAACCCAGAATGTATCCTGCAT...AAAGGGTTTGGAGGGTGAGGATGAGGGGTTATGTAAAGATGGGAGTCCAGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| 3UTR CAA 90 bp | TCCAAAGTTTCAGACCAGGTCAGCTCCAAAACCAGTGTTTTGTATTaGACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATTCT | + |
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Preference number: 2 (lower is better) Translates to: SKVSDQVSSKTSVLY*TIPLSSYFKRSWYS Trigger: AGAATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAAAACACTGGTTTTGGAGCTGACCTGGTCTGAAACTTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| 3UTR CCA 72 bp | GGACCTAGGTCCAGCCCATGCTTGCGTTTTGCTTGGTaGTTGAGTCTCTGGGTGCCCCCAAGGGTCCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: GPRSSPCLRFAW*LSLWVPPRVQV Trigger: AACCTGGACCCTTGGGGGCACCCAGAGACTCAACCACCAAGCAAAACGCAAGCATGGGCTGGACCTAGGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| 3UTR TCA 72 bp | CTAGGTCCAGCCCATGCTTGCGTTTTGCTTGGTGGTTaGGTCTCTGGGTGCCCCCAAGGGTCCAGGTTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LGPAHACVLLGG*VSGCPQGSRLV Trigger: AACTAACCTGGACCCTTGGGGGCACCCAGAGACTCAACCACCAAGCAAAACGCAAGCATGGGCTGGACCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| 3UTR TCA 72 bp | TTGAGTCTCTGGGTGCCCCCAAGGGTCCAGGTTAGTTaGCTATCTTTGTCTTCCTGTAGTCTCTCTATCCCC | + |
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Preference number: 3 (lower is better) Translates to: LSLWVPPRVQVS*LSLSSCSLSIP Trigger: GGGGATAGAGAGACTACAGGAAGACAAAGATAGTCAACTAACCTGGACCCTTGGGGGCACCCAGAGACTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| 3UTR GCA 72 bp | CCCAACTCTTCAACACTACCTGAGCTTGTGGGTCTTTaGATCTGTTTCTATCAGGTGCTGTGTGTAGCCTCT | + |
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Preference number: 3 (lower is better) Translates to: PNSSTLPELVGL*ICFYQVLCVAS Trigger: AGAGGCTACACACAGCACCTGATAGAAACAGATGCAAAGACCCACAAGCTCAGGTAGTGTTGAAGAGTTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| 3UTR GCA 72 bp | TCATCCTCACCCTCCAAACCCTTTTTATCAAATCACTaGAGACTGGTCACATCCTCTCCACTAAGACCAGAA | + |
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Preference number: 3 (lower is better) Translates to: SSSPSKPFLSNH*RLVTSSPLRPE Trigger: TTCTGGTCTTAGTGGAGAGGATGTGACCAGTCTGCAGTGATTTGATAAAAAGGGTTTGGAGGGTGAGGATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| 3UTR TCA 72 bp | CAGACCAGGTCAGCTCCAAAACCAGTGTTTTGTATTTaGCCATTCCTTTGTCTTCATATTTCAAGAGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: QTRSAPKPVFCI*PFLCLHISRGA Trigger: AGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAAAACACTGGTTTTGGAGCTGACCTGGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| 3UTR CAA 72 bp | CCTAGGTCCAGCCCATGCTTGCGTTTTGCTTGGTGGTaGAGTCTCTGGGTGCCCCCAAGGGTCCAGGTTAGT | + |
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Preference number: 4 (lower is better) Translates to: PRSSPCLRFAWW*SLWVPPRVQVS Trigger: ACTAACCTGGACCCTTGGGGGCACCCAGAGACTCAACCACCAAGCAAAACGCAAGCATGGGCTGGACCTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| 3UTR CAA 72 bp | CTAGATATTTCTGGGGGACCTAGGTCCAGCCCATGCTaGCGTTTTGCTTGGTGGTTGAGTCTCTGGGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LDISGGPRSSPC*RFAWWLSLWVP Trigger: GGGCACCCAGAGACTCAACCACCAAGCAAAACGCAAGCATGGGCTGGACCTAGGTCCCCCAGAAATATCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| CDS-3UTR TCA 90 bp | GATATTTCTGGGGGACCTAGGTCCAGCCCATGCTTGCGTTTTGCTTGGTGGTTGAACAGAGAGCATACCTaGGGGGACATGGTAACAGTG | + |
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Preference number: 4 (lower is better) Translates to: DISGGPRSSPCLRFAWWLNREHT*GDMVTV Trigger: CACTGTTACCATGTCCCCTCAGGTATGCTCTCTGTT...CAACCACCAAGCAAAACGCAAGCATGGGCTGGACCTAGGTCCCCCAGAAATATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| 3UTR CAA 72 bp | TTAACAGAATATGATCCACAGGCAGGCAACAGAGAATaGGGTAGACCCAACTACGGCTATTCGGGGACCCTC | + |
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Preference number: 4 (lower is better) Translates to: LTEYDPQAGNRE*GRPNYGYSGTL Trigger: GAGGGTCCCCGAATAGCCGTAGTTGGGTCTACCCAATTCTCTGTTGCCTGCCTGTGGATCATATTCTGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| CDS-3UTR GCA 90 bp | CTCTCTCTCTCTCTCCCTCTCTCTCTCTCATTTTATATTCCAATTGCAGCACCAAGGTCAGCCTCATCATaGAACCTGTGTGGGCCCATG | + |
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Preference number: 4 (lower is better) Translates to: LSLSLPLSLSFYIPIAAPRSASS*NLCGPM Trigger: CATGGGCCCACACAGGTTGCATGATGAGGCTGACCT...TGGTGCTGCAATTGGAATATAAAATGAGAGAGAGAGAGGGAGAGAGAGAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| CDS-3UTR CCA 90 bp | GATATTTCTGGGGGACCTAGGTCCAGCCCATGCTTGCGTTTTGCTTGGTGGTTGAAAACAGAGGAAGGATaGAGGTACATAAATGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: DISGGPRSSPCLRFAWWLKTEEG*RYINAP Trigger: AGGGGCATTTATGTACCTCCATCCTTCCTCTGTTTT...CAACCACCAAGCAAAACGCAAGCATGGGCTGGACCTAGGTCCCCCAGAAATATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| CDS-3UTR TCA 90 bp | ATCTGTTTCTATCAGGTGCTGTGTGTAGCCTCTCAGAGGACAAACATGCTAGGCTCAGTGGATCGGATGTaGAGGATGCTAGAAAGAATG | + |
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Preference number: 4 (lower is better) Translates to: ICFYQVLCVASQRTNMLGSVDRM*RMLERM Trigger: CATTCTTTCTAGCATCCTTCACATCCGATCCACTGA...GCCTAGCATGTTTGTCCTCTGAGAGGCTACACACAGCACCTGATAGAAACAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| CDS-3UTR GCA 90 bp | CTTCCTGTAGTCTCTCTATCCCCTTCAGGTCCCTCAGTCATTCCCCCAACTCTTCCATGCACCAATAAATaGTCCCACATATACAATGAG | + |
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Preference number: 4 (lower is better) Translates to: LPVVSLSPSGPSVIPPTLPCTNK*SHIYNE Trigger: CTCATTGTATATGTGGGAGCATTTATTGGTGCATGG...AAGAGTTGGGGGAATGACTGAGGGACCTGAAGGGGATAGAGAGACTACAGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| 3UTR CAA 72 bp | TCAGTCATTCCCCCAACTCTTCAACACTACCTGAGCTaGTGGGTCTTTGCATCTGTTTCTATCAGGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SVIPPTLQHYLS*WVFASVSIRCC Trigger: ACAGCACCTGATAGAAACAGATGCAAAGACCCACAAGCTCAGGTAGTGTTGAAGAGTTGGGGGAATGACTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| CDS-3UTR TCA 90 bp | ACCATTCATTGGTTGACCATGAGCTCTGTCTCTGTTTCATCTTTTATGCAGGATGTGGACACTTTCCCTTaGTCCATGGACAAAACAGAG | + |
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Preference number: 4 (lower is better) Translates to: TIHWLTMSSVSVSSFMQDVDTFP*SMDKTE Trigger: CTCTGTTTTGTCCATGGATCAAGGGAAAGTGTCCAC...ATCCTGCATAAAAGATGAAACAGAGACAGAGCTCATGGTCAACCAATGAATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| CDS-3UTR GCA 90 bp | TTGTATTTGACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATTCTCTTAGGTCAGCCTCATCATaGAACCTGTGTGGGCCCATG | + |
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Preference number: 4 (lower is better) Translates to: LYLTIPLSSYFKRSWYSLRSASS*NLCGPM Trigger: CATGGGCCCACACAGGTTGCATGATGAGGCTGACCT...AAGAGAATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR GCA 90 bp | TTGTATTTGACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATTCTCTTACCTGTGTGGGCCCATaGACCAATAAATGCTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LYLTIPLSSYFKRSWYSLTCVGP*TNKCSH Trigger: GTGGGAGCATTTATTGGTGCATGGGCCCACACAGGT...AAGAGAATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR GCA 90 bp | TTTGTATTTGACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATTCTCTACCTGTGTGGGCCCATaGACCAATAAATGCTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: FVFDHSFVFIFQEELVFSTCVGP*TNKCSH Trigger: GTGGGAGCATTTATTGGTGCATGGGCCCACACAGGT...AGAGAATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR TCA 90 bp | TTGTATTTGACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATTCTCTTAACAGAGAGCATACCTaGGGGGACATGGTAACAGTG | + |
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Preference number: 4 (lower is better) Translates to: LYLTIPLSSYFKRSWYSLNREHT*GDMVTV Trigger: CACTGTTACCATGTCCCCTCAGGTATGCTCTCTGTT...AAGAGAATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR GCA 90 bp | TTTGTATTTGACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATTCTCTCAGGCCCAGGTTTCCTaGCACTGTGATAGCATAGAT | + |
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Preference number: 4 (lower is better) Translates to: FVFDHSFVFIFQEELVFSQAQVS*HCDSID Trigger: ATCTATGCTATCACAGTGGCAGGAAACCTGGGCCTG...AGAGAATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR GCA 90 bp | AGTGTTTTGTATTTGACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATCAGGCCCAGGTTTCCTaGCACTGTGATAGCATAGAT | + |
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Preference number: 4 (lower is better) Translates to: SVLYLTIPLSSYFKRSWYQAQVS*HCDSID Trigger: ATCTATGCTATCACAGTGGCAGGAAACCTGGGCCTG...ATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAAAACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR TCA 90 bp | TTTGACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATTCTCTTTAGTAGTGGACACTTTCCCTTaGTCCATGGACAAAACAGAG | + |
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Preference number: 4 (lower is better) Translates to: FDHSFVFIFQEELVFSLVVDTFP*SMDKTE Trigger: CTCTGTTTTGTCCATGGATCAAGGGAAAGTGTCCAC...TACTAAAGAGAATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| 3UTR CAA 72 bp | TCTGTAAGTGGGATGGGAGGAATAATCTGGAATGACTaGAAGGATGGGAAAGCCGTGATTAGAATATATTGT | + |
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Preference number: 4 (lower is better) Translates to: SVSGMGGIIWND*KDGKAVIRIYC Trigger: ACAATATATTCTAATCACGGCTTTCCCATCCTTCAAGTCATTCCAGATTATTCCTCCCATCCCACTTACAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| CDS-3UTR TCA 90 bp | TTGTATTTGACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATTCTCTTTCAGTGGATCGGATGTaGAGGATGCTAGAAAGAATG | + |
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Preference number: 4 (lower is better) Translates to: LYLTIPLSSYFKRSWYSLSVDRM*RMLERM Trigger: CATTCTTTCTAGCATCCTTCACATCCGATCCACTGA...AAGAGAATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR TCA 90 bp | GACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATTCTCTTTAGTAACTAACCACAATAATATGTaGGCTACAGGTGCTGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: DHSFVFIFQEELVFSLVTNHNNM*ATGAES Trigger: GCTTTCAGCACCTGTAGCTCACATATTATTGTGGTT...AGTTACTAAAGAGAATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR GCA 90 bp | ACCATTCATTGGTTGACCATGAGCTCTGTCTCTGTTTCATCTTTTATGCAGGATAATAGAGCTGAGTCATaGATCCTTCATAGGAAATTG | + |
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Preference number: 4 (lower is better) Translates to: TIHWLTMSSVSVSSFMQDNRAES*ILHRKL Trigger: CAATTTCCTATGAAGGATGCATGACTCAGCTCTATT...ATCCTGCATAAAAGATGAAACAGAGACAGAGCTCATGGTCAACCAATGAATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| CDS-3UTR CCA 90 bp | TTTGTATTTGACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATTCTCTGCATGGGTACCACAATaGTGTAGAATACAGTGGACA | + |
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Preference number: 4 (lower is better) Translates to: FVFDHSFVFIFQEELVFSAWVPQ*CRIQWT Trigger: TGTCCACTGTATTCTACACCATTGTGGTACCCATGC...AGAGAATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR TCA 90 bp | GACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATTCTCTTTAGTAACTCATAGCATTCTGCACTaGCAAAGAAGCAGTAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: DHSFVFIFQEELVFSLVTHSILH*QRSSRN Trigger: ATTTCTACTGCTTCTTTGTCAGTGCAGAATGCTATG...AGTTACTAAAGAGAATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR TCA 90 bp | AGTGTTTTGTATTTGACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATCTCCCACATATACAATaGGAGTCAACAGAGAGCATA | + |
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Preference number: 4 (lower is better) Translates to: SVLYLTIPLSSYFKRSWYLPHIQ*ESTESI Trigger: TATGCTCTCTGTTGACTCTCATTGTATATGTGGGAG...ATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAAAACACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR TCA 90 bp | TTGTATTTGACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATTCTCTTAACCACAATAATATGTaGGCTACAGGTGCTGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LYLTIPLSSYFKRSWYSLNHNNM*ATGAES Trigger: GCTTTCAGCACCTGTAGCTCACATATTATTGTGGTT...AAGAGAATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR CCA 90 bp | TGTTTTGTATTTGACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATTCAAAACAGAGGAAGGATaGAGGTACATAAATGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: CFVFDHSFVFIFQEELVFKTEEG*RYINAP Trigger: AGGGGCATTTATGTACCTCCATCCTTCCTCTGTTTT...GAATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR CCA 90 bp | AGTGTTTTGTATTTGACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATCTTTCCCTTGATCCATaGACAAAACAGAGGAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: SVLYLTIPLSSYFKRSWYLSLDP*TKQRKD Trigger: ATCCTTCCTCTGTTTTGTCCATGGATCAAGGGAAAG...ATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAAAACACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR CCA 90 bp | TTTGTATTTGACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATTCTCTCTTTCCCTTGATCCATaGACAAAACAGAGGAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: FVFDHSFVFIFQEELVFSLSLDP*TKQRKD Trigger: ATCCTTCCTCTGTTTTGTCCATGGATCAAGGGAAAG...AGAGAATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR TCA 90 bp | GTCTTCATATTTCAAGAGGAGCTGGTATTCTCTTTAGTAACTAATATTATCCCCCATAGCATTCTGCACTaGCAAAGAAGCAGTAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: VFIFQEELVFSLVTNIIPHSILH*QRSSRN Trigger: ATTTCTACTGCTTCTTTGTCAGTGCAGAATGCTATG...GGGGATAATATTAGTTACTAAAGAGAATACCAGCTCCTCTTGAAATATGAAGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR GCA 90 bp | GTTTTGTATTTGACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATTCTCAACACATAGCATTCTaGACTGACAAAGAAGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: VLYLTIPLSSYFKRSWYSQHIAF*TDKEAV Trigger: TACTGCTTCTTTGTCAGTGCAGAATGCTATGTGTTG...AGAATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR GCA 90 bp | GTTTTGTATTTGACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATTCTCACATAGCGATCATATaGCATCACTGTCAACACATA | + |
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Preference number: 4 (lower is better) Translates to: VLYLTIPLSSYFKRSWYSHIAII*HHCQHI Trigger: TATGTGTTGACAGTGATGGCATATGATCGCTATGTG...AGAATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR GCA 90 bp | TTTGTATTTGACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATTCTCTCACATAGCGATCATATaGCATCACTGTCAACACATA | + |
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Preference number: 4 (lower is better) Translates to: FVFDHSFVFIFQEELVFSHIAII*HHCQHI Trigger: TATGTGTTGACAGTGATGGCATATGATCGCTATGTG...AGAGAATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR GCA 90 bp | GTCTTCATATTTCAAGAGGAGCTGGTATTCTCTTTAGTAACTAATATTATCCCCCCATGCACCAATAAATaGTCCCACATATACAATGAG | + |
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Preference number: 4 (lower is better) Translates to: VFIFQEELVFSLVTNIIPPCTNK*SHIYNE Trigger: CTCATTGTATATGTGGGAGCATTTATTGGTGCATGG...GGGGATAATATTAGTTACTAAAGAGAATACCAGCTCCTCTTGAAATATGAAGAC 37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR GCA 90 bp | TGTTTTGTATTTGACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATTCAATAGAGCTGAGTCATaGATCCTTCATAGGAAATTG | + |
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Preference number: 4 (lower is better) Translates to: CFVFDHSFVFIFQEELVFNRAES*ILHRKL Trigger: CAATTTCCTATGAAGGATGCATGACTCAGCTCTATT...GAATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS GCA 90 bp | GGTCAGCCTCATCATGCAACCTGTGTGGGCCCATGCACCAATAAATaGTCCCACATATACAATGAGAGTCAACAGAGAGCATACCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: GQPHHATCVGPCTNK*SHIYNESQQRAYLR Trigger: CCTCAGGTATGCTCTCTGTTGACTCTCATTGTATATGTGGGAGCATTTATTGGTGCATGGGCCCACACAGGTTGCATGATGAGGCTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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| CDS-3UTR CAA 90 bp | TCTGTAAGTGGGATGGGAGGAATAATCTGGAATGACTTGAAGGATGGGAAAGCCAGTGGACACTTTCCCTaGATCCATGGACAAAACAGA | + |
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Preference number: 5 (lower is better) Translates to: SVSGMGGIIWNDLKDGKASGHFP*IHGQNR Trigger: TCTGTTTTGTCCATGGATCAAGGGAAAGTGTCCACT...GGCTTTCCCATCCTTCAAGTCATTCCAGATTATTCCTCCCATCCCACTTACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213164.2 |
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| CDS-3UTR CAA 90 bp | GACCATTCCTTTGTCTTCATATTTCAAGAGGAGCTGGTATTCTCTTTAGTAACTAGTGGACACTTTCCCTaGATCCATGGACAAAACAGA | + |
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Preference number: 5 (lower is better) Translates to: DHSFVFIFQEELVFSLVTSGHFP*IHGQNR Trigger: TCTGTTTTGTCCATGGATCAAGGGAAAGTGTCCACT...AGTTACTAAAGAGAATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051004.5 ENSMUST00000213164.2 |
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