Pregenerated sensors for OLFR920 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061039Ensembl transcript IDs: ENSMUST00000074740.5
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAGATGGTCCCACCCACAAGGGCCTTTGCCCTTTGATCACTAATTaGGAAAATGCCTTACAGTTGGATCTCATGGAGGCATTTCCTCAA | + |
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Preference number: 1 (lower is better) Translates to: RDGPTHKGLCPLITN*ENALQLDLMEAFPQ Trigger: TTGAGGAAATGCCTCCATGAGATCCAACTGTAAGGCATTTTCTCAATTAGTGATCAAAGGGCAAAGGCCCTTGTGGGTGGGACCATCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CCA 90 bp | TCTATTGTGACTGGGAGACCTTTCCTTGCAGTTCTCCATTCCCTCTaGCTCTTAGCTCTTTCTGCAGCCATCTTGTCATGCCTAGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: SIVTGRPFLAVLHSL*LLALSAAILSCLEK Trigger: TTTTTCTAGGCATGACAAGATGGCTGCAGAAAGAGCTAAGAGCCAGAGGGAATGGAGAACTGCAAGGAAAGGTCTCCCAGTCACAATAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR GCA 90 bp | AATTCATACATGCTTCAGTTCTATTGTGACTGGGAGACCTTTCCTTaGAGTTCTCCATTCCCTCTGGCTCTTAGCTCTTTCTGCAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: NSYMLQFYCDWETFP*SSPFPLALSSFCSH Trigger: ATGGCTGCAGAAAGAGCTAAGAGCCAGAGGGAATGGAGAACTGCAAGGAAAGGTCTCCCAGTCACAATAGAACTGAAGCATGTATGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR GCA 90 bp | CATATCCTGCTACACAGGGAAACATCTCTGATGGGGCCTGAGAACTaGAGTAATCTATGGGTAGAGAGTTCAGAATTTATATGGCACTGT | + |
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Preference number: 1 (lower is better) Translates to: HILLHRETSLMGPEN*SNLWVESSEFIWHC Trigger: ACAGTGCCATATAAATTCTGAACTCTCTACCCATAGATTACTGCAGTTCTCAGGCCCCATCAGAGATGTTTCCCTGTGTAGCAGGATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CCA 90 bp | CACAGGGAAACATCTCTGATGGGGCCTGAGAACTGCAGTAATCTATaGGTAGAGAGTTCAGAATTTATATGGCACTGTGATATTTTGTCT | + |
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Preference number: 1 (lower is better) Translates to: HRETSLMGPENCSNL*VESSEFIWHCDILS Trigger: AGACAAAATATCACAGTGCCATATAAATTCTGAACTCTCTACCCATAGATTACTGCAGTTCTCAGGCCCCATCAGAGATGTTTCCCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CCA 90 bp | AAGGTCATGAAGTCAGCAGAGCTGCTTAACACATTCCCGGCAAAATaGAGCAGATTGACTCAATCACTGTTCTTCTATTTCCAAAGTTTT | + |
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Preference number: 1 (lower is better) Translates to: KVMKSAELLNTFPAK*SRLTQSLFFYFQSF Trigger: AAAACTTTGGAAATAGAAGAACAGTGATTGAGTCAATCTGCTCCATTTTGCCGGGAATGTGTTAAGCAGCTCTGCTGACTTCATGACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR TCA 90 bp | ATGGTATATGTCTTAGTCAAGGTTTCTATTCCTTCACAAACATCATaGCCAAGAAGCAAGTTGGGGAGGAAAGGGTTTATTTGGCTTACA | + |
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Preference number: 1 (lower is better) Translates to: MVYVLVKVSIPSQTS*PRSKLGRKGFIWLT Trigger: TGTAAGCCAAATAAACCCTTTCCTCCCCAACTTGCTTCTTGGTCATGATGTTTGTGAAGGAATAGAAACCTTGACTAAGACATATACCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR GCA 90 bp | GAAACTCAAAGCAAAGGAAGCTACTGTTGGAGTACCATTGCTCATTaGTTGACAGCTTCATTATATATAGGAGAGTCACATAGTCATATC | + |
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Preference number: 1 (lower is better) Translates to: ETQSKGSYCWSTIAH*LTASLYIGESHSHI Trigger: GATATGACTATGTGACTCTCCTATATATAATGAAGCTGTCAAGCAATGAGCAATGGTACTCCAACAGTAGCTTCCTTTGCTTTGAGTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR TCA 90 bp | TTCGAGCATTGTACAGACACAGATTCTCTATATATTAAACTGTTATaGATTTCTGTGTTAACCATATCCTGCTACACAGGGAAACATCTC | + |
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Preference number: 1 (lower is better) Translates to: FEHCTDTDSLYIKLL*ISVLTISCYTGKHL Trigger: GAGATGTTTCCCTGTGTAGCAGGATATGGTTAACACAGAAATTCATAACAGTTTAATATATAGAGAATCTGTGTCTGTACAATGCTCGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CAA 90 bp | CAGAGGCCATGGAGGGATATTATTTACTGGCTTGCTTCCCCTGGCTaGCTCAGCCTGCTCTCTTATAGAACCAAGACTACCAGCCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: QRPWRDIIYWLASPG*LSLLSYRTKTTSPE Trigger: CTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAATAATATCCCTCCATGGCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR GCA 90 bp | TGTGACTGGGAGACCTTTCCTTGCAGTTCTCCATTCCCTCTGGCTCTTAGCTCTATGGGGCCTGAGAACTaGAGTAATCTATGGGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: CDWETFPCSSPFPLALSSMGPEN*SNLWVE Trigger: CTCTACCCATAGATTACTGCAGTTCTCAGGCCCCAT...AGAGCTAAGAGCCAGAGGGAATGGAGAACTGCAAGGAAAGGTCTCCCAGTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR CCA 90 bp | TGTGACTGGGAGACCTTTCCTTGCAGTTCTCCATTCCCTCTGGCTCTTAGCTCTTGCCCCATTCTACCCTaGTGTCTGTGTGTTAGAACT | + |
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Preference number: 2 (lower is better) Translates to: CDWETFPCSSPFPLALSSCPILP*CLCVRT Trigger: AGTTCTAACACACAGACACCAGGGTAGAATGGGGCA...AGAGCTAAGAGCCAGAGGGAATGGAGAACTGCAAGGAAAGGTCTCCCAGTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR TCA 90 bp | TTGGAGTACCATTGCTCATTGCTTGACAGCTTCATTATATATAGGAGAGTCACAACAGGGAAACATCTCTaGTGGGGCCTGAGAACTGCA | + |
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Preference number: 2 (lower is better) Translates to: LEYHCSLLDSFIIYRRVTTGKHL*WGLRTA Trigger: TGCAGTTCTCAGGCCCCATCAGAGATGTTTCCCTGT...TGTGACTCTCCTATATATAATGAAGCTGTCAAGCAATGAGCAATGGTACTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR TCA 90 bp | AGCAAGTTGGGGAGGAAAGGGTTTATTTGGCTTACACTTCCATACTGCTGTTTGACTCCAGAATTGTGGTaGAGACATAGAACATGGGAC | + |
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Preference number: 2 (lower is better) Translates to: SKLGRKGFIWLTLPYCCLTPELW*RHRTWD Trigger: GTCCCATGTTCTATGTCTTCACCACAATTCTGGAGT...CAAACAGCAGTATGGAAGTGTAAGCCAAATAAACCCTTTCCTCCCCAACTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CAA 90 bp | ACAAACATCATGACCAAGAAGCAAGTTGGGGAGGAAAGGGTTTATTaGGCTTACACTTCCATACTGCTGTTTGTCACCAAGGAAGTTAGG | + |
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Preference number: 2 (lower is better) Translates to: TNIMTKKQVGEERVY*AYTSILLFVTKEVR Trigger: CCTAACTTCCTTGGTGACAAACAGCAGTATGGAAGTGTAAGCCAAATAAACCCTTTCCTCCCCAACTTGCTTCTTGGTCATGATGTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR TCA 90 bp | TTGGCTTACACTTCCATACTGCTGTTTGTCACCAAGGAAGTTAGGACTGGAACTTCCATGGAAAAAGAATaGCCTTTCTTTTGCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: LAYTSILLFVTKEVRTGTSMEKE*PFFCHH Trigger: GTGGTGGCAAAAGAAAGGTCATTCTTTTTCCATGGA...AGTTCCAGTCCTAACTTCCTTGGTGACAAACAGCAGTATGGAAGTGTAAGCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR TCA 90 bp | TATCAACAATCATGTACTTATGCATTTGATTATGCAATACTGGTACACAGCTCCAGGCAGGCAGATTTCTaGGTTCAAGGCCTGCCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: YQQSCTYAFDYAILVHSSRQADF*VQGLPG Trigger: ACCAGGCAGGCCTTGAACTCAGAAATCTGCCTGCCT...GGAGCTGTGTACCAGTATTGCATAATCAAATGCATAAGTACATGATTGTTGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR TCA 90 bp | TTGGAGTACCATTGCTCATTGCTTGACAGCTTCATTATATATAGGAGAGTCACACCTTCACAAACATCATaGCCAAGAAGCAAGTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LEYHCSLLDSFIIYRRVTPSQTS*PRSKLG Trigger: CCCCAACTTGCTTCTTGGTCATGATGTTTGTGAAGG...TGTGACTCTCCTATATATAATGAAGCTGTCAAGCAATGAGCAATGGTACTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CAA 90 bp | ACTCAAAGCAAAGGAAGCTACTGTTGGAGTACCATTGCTCATTGCTaGACAGCTTCATTATATATAGGAGAGTCACATAGTCATATCCCC | + |
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Preference number: 2 (lower is better) Translates to: TQSKGSYCWSTIAHC*TASLYIGESHSHIP Trigger: GGGGATATGACTATGTGACTCTCCTATATATAATGAAGCTGTCAAGCAATGAGCAATGGTACTCCAACAGTAGCTTCCTTTGCTTTGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR GCA 90 bp | CAATCATGTACTTATGCATTTGATTATGCAATACTGGTACACAGCTCCCAGTATGCTCTTAGCTCTTTCTaGAGCCATCTTGTCATGCCT | + |
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Preference number: 2 (lower is better) Translates to: QSCTYAFDYAILVHSSQYALSSF*SHLVMP Trigger: AGGCATGACAAGATGGCTGCAGAAAGAGCTAAGAGC...ATACTGGGAGCTGTGTACCAGTATTGCATAATCAAATGCATAAGTACATGATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR GCA 90 bp | TTGGCTTACACTTCCATACTGCTGTTTGTCACCAAGGAAGTTAGGACTGGAACTTCTTGTCATCTACTGTaGAAAACATACCTACCTGTA | + |
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Preference number: 2 (lower is better) Translates to: LAYTSILLFVTKEVRTGTSCHLL*KTYLPV Trigger: TACAGGTAGGTATGTTTTGCACAGTAGATGACAAGA...AGTTCCAGTCCTAACTTCCTTGGTGACAAACAGCAGTATGGAAGTGTAAGCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR CCA 90 bp | AAAAAGAATGACCTTTCTTTTGCCACCACTTGTCAACTGAAGATGGTTTCTTGGCAGTTCTATTGTGACTaGGAGACCTTTCCTTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: KKNDLSFATTCQLKMVSWQFYCD*ETFPCS Trigger: ACTGCAAGGAAAGGTCTCCCAGTCACAATAGAACTG...CCAAGAAACCATCTTCAGTTGACAAGTGGTGGCAAAAGAAAGGTCATTCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CAA 90 bp | CCTCAGTTACTCATTGGCAATATCAACAATCATGTACTTATGCATTaGATTATGCAATACTGGTACACAGCTCCCAGTATCGAAGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: PQLLIGNINNHVLMH*IMQYWYTAPSIEGF Trigger: GAAGCCTTCGATACTGGGAGCTGTGTACCAGTATTGCATAATCAAATGCATAAGTACATGATTGTTGATATTGCCAATGAGTAACTGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR TCA 90 bp | TTTCTTGGTTCAGTATGGGAGATTTTATCATCTACTTTCCTTTCCGGAGCTTGGATGATACCTGAGTTTTaGGAGAGGGTTTGTGATACA | + |
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Preference number: 2 (lower is better) Translates to: FLGSVWEILSSTFLSGAWMIPEF*ERVCDT Trigger: TGTATCACAAACCCTCTCTCAAAACTCAGGTATCAT...CCAAGCTCCGGAAAGGAAAGTAGATGATAAAATCTCCCATACTGAACCAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR CCA 90 bp | TTGGAGTACCATTGCTCATTGCTTGACAGCTTCATTATATATAGGAGAGTCACACTGTATGCTGCAATTTaGGGAACTTTCGGCATTATG | + |
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Preference number: 2 (lower is better) Translates to: LEYHCSLLDSFIIYRRVTLYAAI*GTFGIM Trigger: CATAATGCCGAAAGTTCCCCAAATTGCAGCATACAG...TGTGACTCTCCTATATATAATGAAGCTGTCAAGCAATGAGCAATGGTACTCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR CCA 90 bp | TTGGAGTACCATTGCTCATTGCTTGACAGCTTCATTATATATAGGAGAGTCACAACATTCCCGGCAAAATaGAGCAGATTGACTCAATCA | + |
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Preference number: 2 (lower is better) Translates to: LEYHCSLLDSFIIYRRVTTFPAK*SRLTQS Trigger: TGATTGAGTCAATCTGCTCCATTTTGCCGGGAATGT...TGTGACTCTCCTATATATAATGAAGCTGTCAAGCAATGAGCAATGGTACTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR TCA 90 bp | TTTCTTGGTTCAGTATGGGAGATTTTATCATCTACTTTCCTTTCCGGAGCTTGGTTTTATGATGATACCTaGGTTTTGAGAGAGGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: FLGSVWEILSSTFLSGAWFYDDT*VLREGL Trigger: CAAACCCTCTCTCAAAACTCAGGTATCATCATAAAA...CCAAGCTCCGGAAAGGAAAGTAGATGATAAAATCTCCCATACTGAACCAAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR CCA 90 bp | TATCAACAATCATGTACTTATGCATTTGATTATGCAATACTGGTACACAGCTCCTTTAACTGTGCAGCCTaGTGTGTGCTGTTACCAATG | + |
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Preference number: 2 (lower is better) Translates to: YQQSCTYAFDYAILVHSSFNCAA*CVLLPM Trigger: CATTGGTAACAGCACACACCAGGCTGCACAGTTAAA...GGAGCTGTGTACCAGTATTGCATAATCAAATGCATAAGTACATGATTGTTGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR TCA 90 bp | TTGGAGTACCATTGCTCATTGCTTGACAGCTTCATTATATATAGGAGAGTCACATTTTACAATATATCATaGTTGCAGTTCCCCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: LEYHCSLLDSFIIYRRVTFYNIS*LQFPSS Trigger: GGAAGAGGGGAACTGCAATCATGATATATTGTAAAA...TGTGACTCTCCTATATATAATGAAGCTGTCAAGCAATGAGCAATGGTACTCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR GCA 90 bp | TTGGAGTACCATTGCTCATTGCTTGACAGCTTCATTATATATAGGAGAGTCACAGATTTTGTCTCTGTATaGTGCAATTTGGGGAACTTT | + |
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Preference number: 2 (lower is better) Translates to: LEYHCSLLDSFIIYRRVTDFVSV*CNLGNF Trigger: AAAGTTCCCCAAATTGCAGCATACAGAGACAAAATC...TGTGACTCTCCTATATATAATGAAGCTGTCAAGCAATGAGCAATGGTACTCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CAA 90 bp | CAGATTGACTCAATCACTGTTCTTCTATTTCCAAAGTTTTGGATTTaGTCTCTGTATGCTGCAATTTGGGGAACTTTCGGCATTATGATT | + |
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Preference number: 2 (lower is better) Translates to: QIDSITVLLFPKFWI*SLYAAIWGTFGIMI Trigger: AATCATAATGCCGAAAGTTCCCCAAATTGCAGCATACAGAGACAAAATCCAAAACTTTGGAAATAGAAGAACAGTGATTGAGTCAATCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CCA 72 bp | TGCTCTCTTATAGAACCAAGACTACCAGCCCAGAGATaGTCCCACCCACAAGGGCCTTTGCCCTTTGATCAC | + |
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Preference number: 3 (lower is better) Translates to: CSLIEPRLPAQR*SHPQGPLPFDH Trigger: GTGATCAAAGGGCAAAGGCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CCA 72 bp | ACTGGGAGACCTTTCCTTGCAGTTCTCCATTCCCTCTaGCTCTTAGCTCTTTCTGCAGCCATCTTGTCATGC | + |
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Preference number: 3 (lower is better) Translates to: TGRPFLAVLHSL*LLALSAAILSC Trigger: GCATGACAAGATGGCTGCAGAAAGAGCTAAGAGCCAGAGGGAATGGAGAACTGCAAGGAAAGGTCTCCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR GCA 72 bp | TTATTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCCTaGTCTCTTATAGAACCAAGACTACCAGCCCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: LFTGLLPLACSA*SLIEPRLPAQR Trigger: TCTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR CAA 90 bp | GAACCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGCCTTTGCCCTTTATCAGTGTTTTCTGTTaGTTGTTGGTGAAAAACCTC | + |
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Preference number: 3 (lower is better) Translates to: EPRLPAQRWSHPQGPLPFISVFC*LLVKNL Trigger: GAGGTTTTTCACCAACAACAAACAGAAAACACTGAT...AAAGGGCAAAGGCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR TCA 72 bp | CCCACCCACAAGGGCCTTTGCCCTTTGATCACTAATTaGGAAAATGCCTTACAGTTGGATCTCATGGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: PTHKGLCPLITN*ENALQLDLMEA Trigger: TGCCTCCATGAGATCCAACTGTAAGGCATTTTCTCAATTAGTGATCAAAGGGCAAAGGCCCTTGTGGGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR TCA 72 bp | CCAGAGATGGTCCCACCCACAAGGGCCTTTGCCCTTTaGTCACTAATTGAGAAAATGCCTTACAGTTGGATC | + |
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Preference number: 3 (lower is better) Translates to: PEMVPPTRAFAL*SLIEKMPYSWI Trigger: GATCCAACTGTAAGGCATTTTCTCAATTAGTGATCAAAGGGCAAAGGCCCTTGTGGGTGGGACCATCTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR GCA 72 bp | GGAGGGATATTATTTACTGGCTTGCTTCCCCTGGCTTaGTCAGCCTGCTCTCTTATAGAACCAAGACTACCA | + |
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Preference number: 3 (lower is better) Translates to: GGILFTGLLPLA*SACSLIEPRLP Trigger: TGGTAGTCTTGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAATAATATCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR GCA 72 bp | ATGCTTCAGTTCTATTGTGACTGGGAGACCTTTCCTTaGAGTTCTCCATTCCCTCTGGCTCTTAGCTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: MLQFYCDWETFP*SSPFPLALSSF Trigger: GAAAGAGCTAAGAGCCAGAGGGAATGGAGAACTGCAAGGAAAGGTCTCCCAGTCACAATAGAACTGAAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR CAA 90 bp | TTTCTTGGTTCAGTATGGGAGATTTTATCATCTACTTTCCTTTCCGGAGCTTGGCTGGGAGACCTTTCCTaGCAGTTCTCCATTCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: FLGSVWEILSSTFLSGAWLGDLS*QFSIPS Trigger: AGAGGGAATGGAGAACTGCAAGGAAAGGTCTCCCAG...CCAAGCTCCGGAAAGGAAAGTAGATGATAAAATCTCCCATACTGAACCAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR TCA 72 bp | CCTTACAGTTGGATCTCATGGAGGCATTTCCTCAACTaGAGCTCCTTTTTCTGTGATAACTCCAGCTGTGTC | + |
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Preference number: 3 (lower is better) Translates to: PYSWISWRHFLN*SSFFCDNSSCV Trigger: GACACAGCTGGAGTTATCACAGAAAAAGGAGCTTCAGTTGAGGAAATGCCTCCATGAGATCCAACTGTAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CCA 72 bp | TGGGAGATTTTATCATCTACTTTCCTTTCCGGAGCTTaGATCCTGTCTAGCTTTAACTGTGCAGCCTGGTGT | + |
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Preference number: 3 (lower is better) Translates to: WEILSSTFLSGA*ILSSFNCAAWC Trigger: ACACCAGGCTGCACAGTTAAAGCTAGACAGGATCCAAGCTCCGGAAAGGAAAGTAGATGATAAAATCTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR TCA 72 bp | TCCCAGTATCGAAGGCTTCTTACTCCAGAATTGTGGTaGAGACATAGAACATGGGACTATGACAGTGGCTAT | + |
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Preference number: 3 (lower is better) Translates to: SQYRRLLTPELW*RHRTWDYDSGY Trigger: ATAGCCACTGTCATAGTCCCATGTTCTATGTCTTCACCACAATTCTGGAGTAAGAAGCCTTCGATACTGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR GCA 72 bp | CTACACAGGGAAACATCTCTGATGGGGCCTGAGAACTaGAGTAATCTATGGGTAGAGAGTTCAGAATTTATA | + |
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Preference number: 3 (lower is better) Translates to: LHRETSLMGPEN*SNLWVESSEFI Trigger: TATAAATTCTGAACTCTCTACCCATAGATTACTGCAGTTCTCAGGCCCCATCAGAGATGTTTCCCTGTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR GCA 72 bp | CCAAGAAATGCGTCAGCAATTTCTTCCCAAGGAGCTTaGTGTGTATTACATCCTTTATCTTACCACAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: PRNASAISSQGA*CVLHPLSYHSS Trigger: AGAGCTGTGGTAAGATAAAGGATGTAATACACAGCAAGCTCCTTGGGAAGAAATTGCTGACGCATTTCTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CCA 72 bp | ACATCTCTGATGGGGCCTGAGAACTGCAGTAATCTATaGGTAGAGAGTTCAGAATTTATATGGCACTGTGAT | + |
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Preference number: 3 (lower is better) Translates to: TSLMGPENCSNL*VESSEFIWHCD Trigger: ATCACAGTGCCATATAAATTCTGAACTCTCTACCCATAGATTACTGCAGTTCTCAGGCCCCATCAGAGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR CAA 90 bp | GAAACATCTCTGATGGGGCCTGAGAACTGCAGTAATCTATGGGTAGAGAGTTCATGGCACTGTGATATTTaGTCTATTCAGCAAAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: ETSLMGPENCSNLWVESSWHCDI*SIQQKH Trigger: ATGCTTTTGCTGAATAGACAAAATATCACAGTGCCA...TGAACTCTCTACCCATAGATTACTGCAGTTCTCAGGCCCCATCAGAGATGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR-3UTR CAA 90 bp | AGCAAGTTGGGGAGGAAAGGGTTTATTTGGCTTACACTTCCATACTGCTGTTTGGTTTTCTGTTTGTTGTaGGTGAAAAACCTCTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: SKLGRKGFIWLTLPYCCLVFCLL*VKNLFM Trigger: CATGAAGAGGTTTTTCACCAACAACAAACAGAAAAC...CAAACAGCAGTATGGAAGTGTAAGCCAAATAAACCCTTTCCTCCCCAACTTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR TCA 72 bp | GTCTTAGTCAAGGTTTCTATTCCTTCACAAACATCATaGCCAAGAAGCAAGTTGGGGAGGAAAGGGTTTATT | + |
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Preference number: 3 (lower is better) Translates to: VLVKVSIPSQTS*PRSKLGRKGFI Trigger: AATAAACCCTTTCCTCCCCAACTTGCTTCTTGGTCATGATGTTTGTGAAGGAATAGAAACCTTGACTAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR GCA 72 bp | AGCAAAGGAAGCTACTGTTGGAGTACCATTGCTCATTaGTTGACAGCTTCATTATATATAGGAGAGTCACAT | + |
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Preference number: 3 (lower is better) Translates to: SKGSYCWSTIAH*LTASLYIGESH Trigger: ATGTGACTCTCCTATATATAATGAAGCTGTCAAGCAATGAGCAATGGTACTCCAACAGTAGCTTCCTTTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CCA 72 bp | GGGTATCTGCTCCTGAGAAAACTCAAACAGTATAATTaGTACAAGGCAAATAGAGACAACTGCCTAAATCTG | + |
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Preference number: 3 (lower is better) Translates to: GYLLLRKLKQYN*YKANRDNCLNL Trigger: CAGATTTAGGCAGTTGTCTCTATTTGCCTTGTACCAATTATACTGTTTGAGTTTTCTCAGGAGCAGATACCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR GCA 72 bp | AACTCAAAGCAAAGGAAGCTACTGTTGGAGTACCATTaGTCATTGCTTGACAGCTTCATTATATATAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: NSKQRKLLLEYH*SLLDSFIIYRR Trigger: TCTCCTATATATAATGAAGCTGTCAAGCAATGAGCAATGGTACTCCAACAGTAGCTTCCTTTGCTTTGAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CCA 72 bp | TCTTTTGCCACCACTTGTCAACTGAAGATGGTTTCTTaGTTCAGTATGGGAGATTTTATCATCTACTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: SFATTCQLKMVS*FSMGDFIIYFP Trigger: AGGAAAGTAGATGATAAAATCTCCCATACTGAACCAAGAAACCATCTTCAGTTGACAAGTGGTGGCAAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CCA 72 bp | AACAATCATGTACTTATGCATTTGATTATGCAATACTaGTACACAGCTCCCAGTATCGAAGGCTTCTTACTC | + |
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Preference number: 3 (lower is better) Translates to: NNHVLMHLIMQY*YTAPSIEGFLL Trigger: GAGTAAGAAGCCTTCGATACTGGGAGCTGTGTACCAGTATTGCATAATCAAATGCATAAGTACATGATTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CCA 72 bp | CCAAAGTTTTGGATTTTGTCTCTGTATGCTGCAATTTaGGGAACTTTCGGCATTATGATTCAATGTATAGCT | + |
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Preference number: 3 (lower is better) Translates to: PKFWILSLYAAI*GTFGIMIQCIA Trigger: AGCTATACATTGAATCATAATGCCGAAAGTTCCCCAAATTGCAGCATACAGAGACAAAATCCAAAACTTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| CDS-3UTR TCA 90 bp | AGCAAGTTGGGGAGGAAAGGGTTTATTTGGCTTACACTTCCATACTGCTGTTTGGGGAACTACAGGTGCTaGAGGCCTTTGACATGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SKLGRKGFIWLTLPYCCLGNYRC*RPLTCP Trigger: AGGGCATGTCAAAGGCCTTCAGCACCTGTAGTTCCC...CAAACAGCAGTATGGAAGTGTAAGCCAAATAAACCCTTTCCTCCCCAACTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CAA 72 bp | TGGAGGGATATTATTTACTGGCTTGCTTCCCCTGGCTaGCTCAGCCTGCTCTCTTATAGAACCAAGACTACC | + |
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Preference number: 4 (lower is better) Translates to: WRDIIYWLASPG*LSLLSYRTKTT Trigger: GGTAGTCTTGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAATAATATCCCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| CDS-3UTR TCA 90 bp | TTACTCCAGAATTGTGGTGAAGACATAGAACATGGGACTATGACAGTGGCTATGAGGAACAGGGGTACTTaGAGGTCAGGCTGGTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: LLQNCGEDIEHGTMTVAMRNRGT*RSGWSV Trigger: AACAGACCAGCCTGACCTTCAAGTACCCCTGTTCCT...CATAGCCACTGTCATAGTCCCATGTTCTATGTCTTCACCACAATTCTGGAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CAA 72 bp | ATGACCAAGAAGCAAGTTGGGGAGGAAAGGGTTTATTaGGCTTACACTTCCATACTGCTGTTTGTCACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: MTKKQVGEERVY*AYTSILLFVTK Trigger: CTTGGTGACAAACAGCAGTATGGAAGTGTAAGCCAAATAAACCCTTTCCTCCCCAACTTGCTTCTTGGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| CDS-3UTR TCA 90 bp | AAAAAGAATGACCTTTCTTTTGCCACCACTTGTCAACTGAAGATGGTTTCTTGGACACCTCTATCTCATTaGCATAGGTGCTGGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KKNDLSFATTCQLKMVSWTPLSH*HRCWCR Trigger: CCTGCACCAGCACCTATGTCAATGAGATAGAGGTGT...CCAAGAAACCATCTTCAGTTGACAAGTGGTGGCAAAAGAAAGGTCATTCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| CDS-3UTR TCA 90 bp | TTGGCTTACACTTCCATACTGCTGTTTGTCACCAAGGAAGTTAGGACTGGAACTACATCTTCGGAGACATaGCAATGTTATACAAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LAYTSILLFVTKEVRTGTTSSET*QCYTRV Trigger: CACTCTTGTATAACATTGTCATGTCTCCGAAGATGT...AGTTCCAGTCCTAACTTCCTTGGTGACAAACAGCAGTATGGAAGTGTAAGCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| CDS-3UTR TCA 90 bp | AGCAAGTTGGGGAGGAAAGGGTTTATTTGGCTTACACTTCCATACTGCTGTTTGAAACCCCATCAAATATaGACCAAGCATGAGATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKLGRKGFIWLTLPYCCLKPHQI*TKHEIG Trigger: TCCTATCTCATGCTTGGTTCATATTTGATGGGGTTT...CAAACAGCAGTATGGAAGTGTAAGCCAAATAAACCCTTTCCTCCCCAACTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| CDS-3UTR TCA 90 bp | TACAGTATAGTATATAGTAAACCTAGACCAGTACCTCAGTTACTCATTGGCAATTCACAGTGGGCACAATaGTATCCTTCCCTGCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: YSIVYSKPRPVPQLLIGNSQWAQ*YPSLLQ Trigger: TTGTAGCAGGGAAGGATATCATTGTGCCCACTGTGA...ATTGCCAATGAGTAACTGAGGTACTGGTCTAGGTTTACTATATACTATACTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CAA 72 bp | GAGCTGCTTAACACATTCCCGGCAAAATGGAGCAGATaGACTCAATCACTGTTCTTCTATTTCCAAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ELLNTFPAKWSR*TQSLFFYFQSF Trigger: AAAACTTTGGAAATAGAAGAACAGTGATTGAGTCAATCTGCTCCATTTTGCCGGGAATGTGTTAAGCAGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CAA 72 bp | AAGCAAAGGAAGCTACTGTTGGAGTACCATTGCTCATaGCTTGACAGCTTCATTATATATAGGAGAGTCACA | + |
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Preference number: 4 (lower is better) Translates to: KQRKLLLEYHCS*LDSFIIYRRVT Trigger: TGTGACTCTCCTATATATAATGAAGCTGTCAAGCAATGAGCAATGGTACTCCAACAGTAGCTTCCTTTGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CAA 72 bp | TTGCTGTGTATTACATCCTTTATCTTACCACAGCTCTaGGTTCAACCTGGAGACACAGAAACTCAAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLCITSFILPQL*VQPGDTETQSK Trigger: TTTGCTTTGAGTTTCTGTGTCTCCAGGTTGAACCAAGAGCTGTGGTAAGATAAAGGATGTAATACACAGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| CDS-3UTR TCA 90 bp | TTGGAGTACCATTGCTCATTGCTTGACAGCTTCATTATATATAGGAGAGTCACATTAATCCCAAGAGAATaGATTCTGTTACCACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEYHCSLLDSFIIYRRVTLIPRE*ILLPQS Trigger: GCTCTGTGGTAACAGAATTCATTCTCTTGGGATTAA...TGTGACTCTCCTATATATAATGAAGCTGTCAAGCAATGAGCAATGGTACTCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| CDS-3UTR TCA 90 bp | TTTCTTGGTTCAGTATGGGAGATTTTATCATCTACTTTCCTTTCCGGAGCTTGGGTTCATTGTTCCAGTTaGGTTGGGTTTAAGATACAT | + |
|
Preference number: 4 (lower is better) Translates to: FLGSVWEILSSTFLSGAWVHCSS*VGFKIH Trigger: ATGTATCTTAAACCCAACTCAACTGGAACAATGAAC...CCAAGCTCCGGAAAGGAAAGTAGATGATAAAATCTCCCATACTGAACCAAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CAA 72 bp | AAAGGAAGCTACTGTTGGAGTACCATTGCTCATTGCTaGACAGCTTCATTATATATAGGAGAGTCACATAGT | + |
|
Preference number: 4 (lower is better) Translates to: KGSYCWSTIAHC*TASLYIGESHS Trigger: ACTATGTGACTCTCCTATATATAATGAAGCTGTCAAGCAATGAGCAATGGTACTCCAACAGTAGCTTCCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| CDS-3UTR TCA 90 bp | AAAAAGAATGACCTTTCTTTTGCCACCACTTGTCAACTGAAGATGGTTTCTTGGAAGGATGAAGCCATATaGGATAAAGATGATCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KKNDLSFATTCQLKMVSWKDEAI*DKDDHS Trigger: ACTGTGATCATCTTTATCTCATATGGCTTCATCCTT...CCAAGAAACCATCTTCAGTTGACAAGTGGTGGCAAAAGAAAGGTCATTCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CAA 72 bp | CTCATTGGCAATATCAACAATCATGTACTTATGCATTaGATTATGCAATACTGGTACACAGCTCCCAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: LIGNINNHVLMH*IMQYWYTAPSI Trigger: GATACTGGGAGCTGTGTACCAGTATTGCATAATCAAATGCATAAGTACATGATTGTTGATATTGCCAATGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| 3UTR CAA 72 bp | GTAGAGAGTTCAGAATTTATATGGCACTGTGATATTTaGTCTATTCAGCAAAAGCATATGAGGGGGTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: VESSEFIWHCDI*SIQQKHMRGFT Trigger: AGTAAACCCCCTCATATGCTTTTGCTGAATAGACAAAATATCACAGTGCCATATAAATTCTGAACTCTCTAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| CDS-3UTR CCA 90 bp | TATCAACAATCATGTACTTATGCATTTGATTATGCAATACTGGTACACAGCTCCAATGTTATACAAGAGTaGATTGCAGATAGCCACATA | + |
|
Preference number: 4 (lower is better) Translates to: YQQSCTYAFDYAILVHSSNVIQE*IADSHI Trigger: TATGTGGCTATCTGCAATCCACTCTTGTATAACATT...GGAGCTGTGTACCAGTATTGCATAATCAAATGCATAAGTACATGATTGTTGATA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| CDS-3UTR CAA 90 bp | AGCAAGTTGGGGAGGAAAGGGTTTATTTGGCTTACACTTCCATACTGCTGTTTGCAGGAACAGGGGTACTaGAAGGTCAGGCTGGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SKLGRKGFIWLTLPYCCLQEQGY*KVRLVC Trigger: ACAGACCAGCCTGACCTTCAAGTACCCCTGTTCCTG...CAAACAGCAGTATGGAAGTGTAAGCCAAATAAACCCTTTCCTCCCCAACTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| CDS-3UTR CAA 90 bp | AAAAAGAATGACCTTTCTTTTGCCACCACTTGTCAACTGAAGATGGTTTCTTGGTCTTTCCATTGTTCATaGTTCCAGTTGAGTTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KKNDLSFATTCQLKMVSWSFHCS*FQLSWV Trigger: AACCCAACTCAACTGGAACAATGAACAATGGAAAGA...CCAAGAAACCATCTTCAGTTGACAAGTGGTGGCAAAAGAAAGGTCATTCTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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| CDS-3UTR CAA 90 bp | AAAAAGAATGACCTTTCTTTTGCCACCACTTGTCAACTGAAGATGGTTTCTTGGGAAGGTATCTTTCCATaGTTCATTGTTCCAGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KKNDLSFATTCQLKMVSWEGIFP*FIVPVE Trigger: CTCAACTGGAACAATGAACAATGGAAAGATACCTTC...CCAAGAAACCATCTTCAGTTGACAAGTGGTGGCAAAAGAAAGGTCATTCTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074740.5 |
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