Pregenerated sensors for OLFR916 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094701Ensembl transcript IDs: ENSMUST00000081196.2, ENSMUST00000213714.2, ENSMUST00000214093.3
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCAGGCACCAAGCATGAGGGTCTCTTCCCTGCTGGGCAGAGATTaGGCACAGGAACCTTCCAAACATTTCTACACATTTCTGCCAAGG | + |
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Preference number: 1 (lower is better) Translates to: LQAPSMRVSSLLGRD*AQEPSKHFYTFLPR Trigger: CCTTGGCAGAAATGTGTAGAAATGTTTGGAAGGTTCCTGTGCTCAATCTCTGCCCAGCAGGGAAGAGACCCTCATGCTTGGTGCCTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR TCA 90 bp | AATCGTGCAAAATTCCATGGGCCAAGCATATTCAAACAAACACCATaGATAAGATCTGCAGGCAGCCTGTCAGGTCTTGTGACAGGTGTG | + |
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Preference number: 1 (lower is better) Translates to: NRAKFHGPSIFKQTP*IRSAGSLSGLVTGV Trigger: CACACCTGTCACAAGACCTGACAGGCTGCCTGCAGATCTTATTCATGGTGTTTGTTTGAATATGCTTGGCCCATGGAATTTTGCACGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR GCA 90 bp | GCAGAGATTGAGCACAGGAACCTTCCAAACATTTCTACACATTTCTaGCAAGGAAGCTGCACCTATTCCAACAAGGCTACGCCTCTTAAT | + |
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Preference number: 1 (lower is better) Translates to: AEIEHRNLPNISTHF*QGSCTYSNKATPLN Trigger: ATTAAGAGGCGTAGCCTTGTTGGAATAGGTGCAGCTTCCTTGGCAGAAATGTGTAGAAATGTTTGGAAGGTTCCTGTGCTCAATCTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR GCA 90 bp | CACAGGAACCTTCCAAACATTTCTACACATTTCTGCCAAGGAAGCTaGACCTATTCCAACAAGGCTACGCCTCTTAATCGTGCAAAATTC | + |
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Preference number: 1 (lower is better) Translates to: HRNLPNISTHFCQGS*TYSNKATPLNRAKF Trigger: GAATTTTGCACGATTAAGAGGCGTAGCCTTGTTGGAATAGGTGCAGCTTCCTTGGCAGAAATGTGTAGAAATGTTTGGAAGGTTCCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR-3UTR GCA 90 bp | TTATCTTCTGCAGGCACCAAGCATGAGGGTCTCTTCCCTGCTGGGCAGAGATTGTCAAACACAGAAATCTaGCTGCCTCTGCCTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: LSSAGTKHEGLFPAGQRLSNTEI*LPLPPK Trigger: CTTGGGAGGCAGAGGCAGGCAGATTTCTGTGTTTGA...CAATCTCTGCCCAGCAGGGAAGAGACCCTCATGCTTGGTGCCTGCAGAAGATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR CAA 90 bp | TCTGCAGGCACCAAGCATGAGGGTCTCTTCCCTGCTGGGCAGAGATaGAGCACAGGAACCTTCCAAACATTTCTACACATTTCTGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: SAGTKHEGLFPAGQR*STGTFQTFLHISAK Trigger: CTTGGCAGAAATGTGTAGAAATGTTTGGAAGGTTCCTGTGCTCAATCTCTGCCCAGCAGGGAAGAGACCCTCATGCTTGGTGCCTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTCCCTGCTGGGCAGAGATTGAGCACAGGAACCTTCCAAACATTTCTACATTCTGCCAAGGAAGCTaGACCTATTCCAACAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: SLPCWAEIEHRNLPNISTFCQGS*TYSNKA Trigger: AGCCTTGTTGGAATAGGTGCAGCTTCCTTGGCAGAA...TGTAGAAATGTTTGGAAGGTTCCTGTGCTCAATCTCTGCCCAGCAGGGAAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR-3UTR GCA 90 bp | TTATCTTCTGCAGGCACCAAGCATGAGGGTCTCTTCCCTGCTGGGCAGAGATTGATTTCTACACATTTCTaGCAAGGAAGCTGCACCTAT | + |
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Preference number: 2 (lower is better) Translates to: LSSAGTKHEGLFPAGQRLISTHF*QGSCTY Trigger: ATAGGTGCAGCTTCCTTGGCAGAAATGTGTAGAAAT...CAATCTCTGCCCAGCAGGGAAGAGACCCTCATGCTTGGTGCCTGCAGAAGATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR-3UTR GCA 90 bp | CTCCCAAGTGCTGGGATTAAAGGCATGTACCATCACTGTCCCGCTCTAAATAGACTGCCCAAACTAAGATaGATAAAGTCAACACCATAC | + |
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Preference number: 2 (lower is better) Translates to: LPSAGIKGMYHHCPALNRLPKLR*IKSTPY Trigger: GTATGGTGTTGACTTTATGCATCTTAGTTTGGGCAG...TCTATTTAGAGCGGGACAGTGATGGTACATGCCTTTAATCCCAGCACTTGGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213714.2 ENSMUST00000214093.3 |
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| 3UTR-3UTR CCA 90 bp | ATTGAGCACAGGAACCTTCCAAACATTTCTACACATTTCTGCCAAGGAAGCTGCATTTATTCCTTGGACTaGCTGTCCTCATGCTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: IEHRNLPNISTHFCQGSCIYSLD*LSSCSL Trigger: CAAGGAGCATGAGGACAGCCAGTCCAAGGAATAAAT...GCAGCTTCCTTGGCAGAAATGTGTAGAAATGTTTGGAAGGTTCCTGTGCTCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTCCCTGCTGGGCAGAGATTGAGCACAGGAACCTTCCAAACATTTCTACACAAAATATTTATACTTaGTCCGTGTGTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: SLPCWAEIEHRNLPNISTQNIYT*SVCVCV Trigger: CACACACACACACACGGAGCAAGTATAAATATTTTG...TGTAGAAATGTTTGGAAGGTTCCTGTGCTCAATCTCTGCCCAGCAGGGAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGGACTGGCTGTCCTCATGCTCCTTGAACAAAATAAATATAGACTGTTTTCTCTGTACAACAGCCTaGCCTCAAACACAGAAATCT | + |
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Preference number: 2 (lower is better) Translates to: SLDWLSSCSLNKINIDCFLCTTA*PQTQKS Trigger: AGATTTCTGTGTTTGAGGCCAGGCTGTTGTACAGAG...AAAACAGTCTATATTTATTTTGTTCAAGGAGCATGAGGACAGCCAGTCCAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR CAA 90 bp | GATTCTTTGAAGAAAAGGGCTCTTATTTATTCACTATCTGTCTCCTaGGCTGCTAGTCTAATGACTTTTTGGGCTCTCTTTCTATCCCAG | + |
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Preference number: 2 (lower is better) Translates to: DSLKKRALIYSLSVS*AASLMTFWALFLSQ Trigger: CTGGGATAGAAAGAGAGCCCAAAAAGTCATTAGACTAGCAGCCAAGGAGACAGATAGTGAATAAATAAGAGCCCTTTTCTTCAAAGAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR-3UTR GCA 90 bp | TTGACATCCTTCAAGCAGACATGGTACAGGAAGAACCAAGAGTTCTATATCTTGCTGCCCAAACTAAGATaGATAAAGTCAACACCATAC | + |
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Preference number: 2 (lower is better) Translates to: LTSFKQTWYRKNQEFYILLPKLR*IKSTPY Trigger: GTATGGTGTTGACTTTATGCATCTTAGTTTGGGCAG...CAAGATATAGAACTCTTGGTTCTTCCTGTACCATGTCTGCTTGAAGGATGTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR-3UTR GCA 90 bp | ATTGAGCACAGGAACCTTCCAAACATTTCTACACATTTCTGCCAAGGAAGCTGCAAAACATTACTCATGTaGAGTCATTGTTGGTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: IEHRNLPNISTHFCQGSCKTLLM*SHCWCE Trigger: TTCACACCAACAATGACTGCACATGAGTAATGTTTT...GCAGCTTCCTTGGCAGAAATGTGTAGAAATGTTTGGAAGGTTCCTGTGCTCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR-3UTR GCA 90 bp | ATGCCAGAGCTAGTGTTGAATGAGCTCTTTCCTTGGTCCCTATTTTATGTAATTGAAGCTTCCATTTTCTaGCCTTCAATGTCTGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: MPELVLNELFPWSLFYVIEASIF*PSMSES Trigger: GCTTTCAGACATTGAAGGGCAGAAAATGGAAGCTTC...AATTACATAAAATAGGGACCAAGGAAAGAGCTCATTCAACACTAGCTCTGGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR-3UTR CCA 90 bp | TTGACATCCTTCAAGCAGACATGGTACAGGAAGAACCAAGAGTTCTATATCTTGAAGATATTTATTCCTTaGACTGGCTGTCCTCATGCT | + |
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Preference number: 2 (lower is better) Translates to: LTSFKQTWYRKNQEFYILKIFIP*TGCPHA Trigger: AGCATGAGGACAGCCAGTCCAAGGAATAAATATCTT...CAAGATATAGAACTCTTGGTTCTTCCTGTACCATGTCTGCTTGAAGGATGTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR-3UTR CCA 90 bp | CCCAATAAACAATCTTCATTACTCAAAACATTACTCATGTGCAGTCATTGTTGGAGTCTAATGACTTTTTaGGCTCTCTTTCTATCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PNKQSSLLKTLLMCSHCWSLMTF*ALFLSQ Trigger: CTGGGATAGAAAGAGAGCCCAAAAAGTCATTAGACT...CCAACAATGACTGCACATGAGTAATGTTTTGAGTAATGAAGATTGTTTATTGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR CCA 72 bp | CCCTGGCTGCCCTGTAACTCACTCTGTACAACAGCCTaGCCTCAAACACAGAAATCTGCCTGCCTCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: PWLPCNSLCTTA*PQTQKSACLCL Trigger: GAGGCAGAGGCAGGCAGATTTCTGTGTTTGAGGCCAGGCTGTTGTACAGAGTGAGTTACAGGGCAGCCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR-3UTR CAA 90 bp | TTATCTTCTGCAGGCACCAAGCATGAGGGTCTCTTCCCTGCTGGGCAGAGATTGATGCCAGAGCTAGTGTaGAATGAGCTCTTTCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: LSSAGTKHEGLFPAGQRLMPELV*NELFPW Trigger: CCAAGGAAAGAGCTCATTCAACACTAGCTCTGGCAT...CAATCTCTGCCCAGCAGGGAAGAGACCCTCATGCTTGGTGCCTGCAGAAGATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR TCA 72 bp | CCAAGCATGAGGGTCTCTTCCCTGCTGGGCAGAGATTaGGCACAGGAACCTTCCAAACATTTCTACACATTT | + |
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Preference number: 3 (lower is better) Translates to: PSMRVSSLLGRD*AQEPSKHFYTF Trigger: AAATGTGTAGAAATGTTTGGAAGGTTCCTGTGCTCAATCTCTGCCCAGCAGGGAAGAGACCCTCATGCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR-3UTR CAA 90 bp | TCCAGAAGGAGAGATTATCTTCTGCAGGCACCAAGCATGAGGGTCTCTTCCCTGTTGTGGTATATATACTaGGTGCGTGTGTGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: SRRRDYLLQAPSMRVSSLLWYIY*VRVCVC Trigger: ACACACACACACACGCACCAAGTATATATACCACAA...CAGGGAAGAGACCCTCATGCTTGGTGCCTGCAGAAGATAATCTCTCCTTCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR TCA 72 bp | AAATTCCATGGGCCAAGCATATTCAAACAAACACCATaGATAAGATCTGCAGGCAGCCTGTCAGGTCTTGTG | + |
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Preference number: 3 (lower is better) Translates to: KFHGPSIFKQTP*IRSAGSLSGLV Trigger: CACAAGACCTGACAGGCTGCCTGCAGATCTTATTCATGGTGTTTGTTTGAATATGCTTGGCCCATGGAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR GCA 72 bp | CTTCCAAACATTTCTACACATTTCTGCCAAGGAAGCTaGACCTATTCCAACAAGGCTACGCCTCTTAATCGT | + |
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Preference number: 3 (lower is better) Translates to: LPNISTHFCQGS*TYSNKATPLNR Trigger: ACGATTAAGAGGCGTAGCCTTGTTGGAATAGGTGCAGCTTCCTTGGCAGAAATGTGTAGAAATGTTTGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR TCA 72 bp | AGACATGGTACAGGAAGAACCAAGAGTTCTATATCTTaGTCCAAAGGCATCCAGAAGGAGAGATTATCTTCT | + |
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Preference number: 3 (lower is better) Translates to: RHGTGRTKSSIS*SKGIQKERLSS Trigger: AGAAGATAATCTCTCCTTCTGGATGCCTTTGGATCAAGATATAGAACTCTTGGTTCTTCCTGTACCATGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR TCA 72 bp | CGTCAATGCCATGTTTATGCCAGAGCTAGTGTTGAATaGGCTCTTTCCTTGGTCCCTATTTTATGTAATTTT | + |
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Preference number: 3 (lower is better) Translates to: RQCHVYARASVE*ALSLVPILCNF Trigger: AAAATTACATAAAATAGGGACCAAGGAAAGAGCTCATTCAACACTAGCTCTGGCATAAACATGGCATTGACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR TCA 72 bp | ACAACATTCCAAAATAAAGAAACCACGTCTACAACCTaGGACATGTGTCCTTCACAGACAAATGATAATAAG | + |
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Preference number: 3 (lower is better) Translates to: TTFQNKETTSTT*DMCPSQTNDNK Trigger: CTTATTATCATTTGTCTGTGAAGGACACATGTCTCAGGTTGTAGACGTGGTTTCTTTATTTTGGAATGTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| CDS-3UTR TCA 90 bp | CTCCCAAGTGCTGGGATTAAAGGCATGTACCATCACTGTCCCGCTCTAAATAGAAGCAGCAATGATGTGTaGGCTACAGGTGCTGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LPSAGIKGMYHHCPALNRSSNDV*ATGAES Trigger: GCTTTCAGCACCTGTAGCTCACACATCATTGCTGCT...TCTATTTAGAGCGGGACAGTGATGGTACATGCCTTTAATCCCAGCACTTGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213714.2 ENSMUST00000214093.3 |
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| CDS-3UTR TCA 90 bp | CTCCCAAGTGCTGGGATTAAAGGCATGTACCATCACTGTCCCGCTCTAAATAGACACAGAAGTAGTGGTTaGTTTTGTTGGCATCACAGA | + |
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Preference number: 4 (lower is better) Translates to: LPSAGIKGMYHHCPALNRHRSSG*FCWHHR Trigger: TCTGTGATGCCAACAAAATCAACCACTACTTCTGTG...TCTATTTAGAGCGGGACAGTGATGGTACATGCCTTTAATCCCAGCACTTGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213714.2 ENSMUST00000214093.3 |
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| CDS-3UTR TCA 90 bp | CCAAGTGCTGGGATTAAAGGCATGTACCATCACTGTCCCGCTCTAAATAGAATAACAGAAAAGCAGCAATaGTGTGTGAGCTACAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: PSAGIKGMYHHCPALNRITEKQQ*CVSYRC Trigger: GCACCTGTAGCTCACACATCATTGCTGCTTTTCTGT...TATTCTATTTAGAGCGGGACAGTGATGGTACATGCCTTTAATCCCAGCACTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213714.2 ENSMUST00000214093.3 |
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| CDS-3UTR TCA 90 bp | CTCCCAAGTGCTGGGATTAAAGGCATGTACCATCACTGTCCCGCTCTAAATAGAATCCATAGACTCAGCTaGGGATGGTTGGAAATACAT | + |
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Preference number: 4 (lower is better) Translates to: LPSAGIKGMYHHCPALNRIHRLS*GWLEIH Trigger: ATGTATTTCCAACCATCCTCAGCTGAGTCTATGGAT...TCTATTTAGAGCGGGACAGTGATGGTACATGCCTTTAATCCCAGCACTTGGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213714.2 ENSMUST00000214093.3 |
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| CDS-3UTR TCA 90 bp | TTGACATCCTTCAAGCAGACATGGTACAGGAAGAACCAAGAGTTCTATATCTTGAGCAGCAATGATGTGTaGGCTACAGGTGCTGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LTSFKQTWYRKNQEFYILSSNDV*ATGAES Trigger: GCTTTCAGCACCTGTAGCTCACACATCATTGCTGCT...CAAGATATAGAACTCTTGGTTCTTCCTGTACCATGTCTGCTTGAAGGATGTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| CDS-3UTR CCA 90 bp | CTCCCAAGTGCTGGGATTAAAGGCATGTACCATCACTGTCCCGCTCTAAATAGAGTTGTACAGGAAAGTTaGAGCAAAGGTGGAATATCA | + |
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Preference number: 4 (lower is better) Translates to: LPSAGIKGMYHHCPALNRVVQES*SKGGIS Trigger: TGATATTCCACCTTTGCTCCAACTTTCCTGTACAAC...TCTATTTAGAGCGGGACAGTGATGGTACATGCCTTTAATCCCAGCACTTGGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213714.2 ENSMUST00000214093.3 |
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| CDS-3UTR GCA 90 bp | CCAAGTGCTGGGATTAAAGGCATGTACCATCACTGTCCCGCTCTAAATAGAATAAGTTCAGTCTCATTATaGAAACAGTGTGAGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: PSAGIKGMYHHCPALNRISSVSL*KQCEPQ Trigger: CTGTGGCTCACACTGTTTGCATAATGAGACTGAACT...TATTCTATTTAGAGCGGGACAGTGATGGTACATGCCTTTAATCCCAGCACTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213714.2 ENSMUST00000214093.3 |
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| CDS-3UTR TCA 90 bp | CCAAGTGCTGGGATTAAAGGCATGTACCATCACTGTCCCGCTCTAAATAGAATAATTATGCAAACAGTGTaGGCCACAGACTCAGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: PSAGIKGMYHHCPALNRIIMQTV*ATDSEN Trigger: ATTTTCTGAGTCTGTGGCTCACACTGTTTGCATAAT...TATTCTATTTAGAGCGGGACAGTGATGGTACATGCCTTTAATCCCAGCACTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213714.2 ENSMUST00000214093.3 |
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| CDS-3UTR TCA 90 bp | CCAAGTGCTGGGATTAAAGGCATGTACCATCACTGTCCCGCTCTAAATAGAATATCAGAAGAATGGATGTaGAAGATGCTGGAGAGAATA | + |
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Preference number: 4 (lower is better) Translates to: PSAGIKGMYHHCPALNRISEEWM*KMLERI Trigger: TATTCTCTCCAGCATCTTTCACATCCATTCTTCTGA...TATTCTATTTAGAGCGGGACAGTGATGGTACATGCCTTTAATCCCAGCACTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213714.2 ENSMUST00000214093.3 |
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| CDS-3UTR TCA 90 bp | ACTTTTTGGGCTCTCTTTCTATCCCAGATCTCTTTTCTTGAAGTACTCGACCCTATCCATAGACTCAGCTaGGGATGGTTGGAAATACAT | + |
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Preference number: 4 (lower is better) Translates to: TFWALFLSQISFLEVLDPIHRLS*GWLEIH Trigger: ATGTATTTCCAACCATCCTCAGCTGAGTCTATGGAT...AGGGTCGAGTACTTCAAGAAAAGAGATCTGGGATAGAAAGAGAGCCCAAAAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| CDS-3UTR TCA 90 bp | CAGGAAGAACCAAGAGTTCTATATCTTGATCCAAAGGCATCCAGAAGGAGAGATATTATGCAAACAGTGTaGGCCACAGACTCAGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: QEEPRVLYLDPKASRRRDIMQTV*ATDSEN Trigger: ATTTTCTGAGTCTGTGGCTCACACTGTTTGCATAAT...ATCTCTCCTTCTGGATGCCTTTGGATCAAGATATAGAACTCTTGGTTCTTCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| CDS-3UTR TCA 90 bp | CCAAGTGCTGGGATTAAAGGCATGTACCATCACTGTCCCGCTCTAAATAGAATAAAACTACAAGCTTGTTaGTATATGTGGTTGTACAGG | + |
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Preference number: 4 (lower is better) Translates to: PSAGIKGMYHHCPALNRIKLQAC*YMWLYR Trigger: CCTGTACAACCACATATATCAACAAGCTTGTAGTTT...TATTCTATTTAGAGCGGGACAGTGATGGTACATGCCTTTAATCCCAGCACTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213714.2 ENSMUST00000214093.3 |
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| CDS-3UTR TCA 90 bp | CCCAATAAACAATCTTCATTACTCAAAACATTACTCATGTGCAGTCATTGTTGGACAGAAAAGCAGCAATaGTGTGTGAGCTACAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: PNKQSSLLKTLLMCSHCWTEKQQ*CVSYRC Trigger: GCACCTGTAGCTCACACATCATTGCTGCTTTTCTGT...CCAACAATGACTGCACATGAGTAATGTTTTGAGTAATGAAGATTGTTTATTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR CAA 72 bp | AGAATCGTCAATGCCATGTTTATGCCAGAGCTAGTGTaGAATGAGCTCTTTCCTTGGTCCCTATTTTATGTA | + |
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Preference number: 4 (lower is better) Translates to: RIVNAMFMPELV*NELFPWSLFYV Trigger: TACATAAAATAGGGACCAAGGAAAGAGCTCATTCAACACTAGCTCTGGCATAAACATGGCATTGACGATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| 3UTR CAA 72 bp | AAGAAAAGGGCTCTTATTTATTCACTATCTGTCTCCTaGGCTGCTAGTCTAATGACTTTTTGGGCTCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: KKRALIYSLSVS*AASLMTFWALF Trigger: AAAGAGAGCCCAAAAAGTCATTAGACTAGCAGCCAAGGAGACAGATAGTGAATAAATAAGAGCCCTTTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| CDS-3UTR TCA 90 bp | CCCAATAAACAATCTTCATTACTCAAAACATTACTCATGTGCAGTCATTGTTGGCACAGAAGTAGTGGTTaGTTTTGTTGGCATCACAGA | + |
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Preference number: 4 (lower is better) Translates to: PNKQSSLLKTLLMCSHCWHRSSG*FCWHHR Trigger: TCTGTGATGCCAACAAAATCAACCACTACTTCTGTG...CCAACAATGACTGCACATGAGTAATGTTTTGAGTAATGAAGATTGTTTATTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| CDS-3UTR TCA 90 bp | TTGGACTGGCTGTCCTCATGCTCCTTGAACAAAATAAATATAGACTGTTTTCATTCAGAAGAATGGATGTaGAAGATGCTGGAGAGAATA | + |
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Preference number: 4 (lower is better) Translates to: LDWLSSCSLNKINIDCFHSEEWM*KMLERI Trigger: TATTCTCTCCAGCATCTTTCACATCCATTCTTCTGA...ATGAAAACAGTCTATATTTATTTTGTTCAAGGAGCATGAGGACAGCCAGTCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| CDS-3UTR CAA 90 bp | CTCCCAAGTGCTGGGATTAAAGGCATGTACCATCACTGTCCCGCTCTAAATAGAGGTTGTACAGGAAAGTaGGAGCAAAGGTGGAATATC | + |
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Preference number: 5 (lower is better) Translates to: LPSAGIKGMYHHCPALNRGCTGK*EQRWNI Trigger: GATATTCCACCTTTGCTCCAACTTTCCTGTACAACC...TCTATTTAGAGCGGGACAGTGATGGTACATGCCTTTAATCCCAGCACTTGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213714.2 ENSMUST00000214093.3 |
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| CDS-3UTR CAA 90 bp | TCCTTGGACTGGCTGTCCTCATGCTCCTTGAACAAAATAAATATAGACTGTTTTGGTTGTACAGGAAAGTaGGAGCAAAGGTGGAATATC | + |
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Preference number: 5 (lower is better) Translates to: SLDWLSSCSLNKINIDCFGCTGK*EQRWNI Trigger: GATATTCCACCTTTGCTCCAACTTTCCTGTACAACC...AAAACAGTCTATATTTATTTTGTTCAAGGAGCATGAGGACAGCCAGTCCAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214093.3 |
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| CDS CAA 90 bp | ATGGGAACAATGATATTGATGCTAGAAGCAACAAAAACTACAAGCTaGTTGATATATGTGGTTGTACAGGAAAGTTGGAGCAAAGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: MGTMILMLEATKTTS*LIYVVVQESWSKGG Trigger: TCCACCTTTGCTCCAACTTTCCTGTACAACCACATATATCAACAAGCTTGTAGTTTTTGTTGCTTCTAGCATCAATATCATTGTTCCCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000081196.2 ENSMUST00000213714.2 ENSMUST00000214093.3 |
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| CDS CAA 90 bp | GGAACAATGATATTGATGCTAGAAGCAACAAAAACTACAAGCTTGTaGATATATGTGGTTGTACAGGAAAGTTGGAGCAAAGGTGGAATA | + |
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Preference number: 6 (lower is better) Translates to: GTMILMLEATKTTSL*IYVVVQESWSKGGI Trigger: TATTCCACCTTTGCTCCAACTTTCCTGTACAACCACATATATCAACAAGCTTGTAGTTTTTGTTGCTTCTAGCATCAATATCATTGTTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000081196.2 ENSMUST00000213714.2 ENSMUST00000214093.3 |
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