Pregenerated sensors for OLFR890 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096409Ensembl transcript IDs: ENSMUST00000213458.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGATTGGAGCTaGGAAGAAAGGATGAACCATCTAGTGACTGCCATATCCGGCAAT | + |
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Preference number: 1 (lower is better) Translates to: EQNTHGRSYRDKDWS*EERMNHLVTAISGN Trigger: ATTGCCGGATATGGCAGTCACTAGATGGTTCATCCTTTCTTCTCAGCTCCAATCTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR TCA 90 bp | AAACCCAGACCCATTACACTGTTGTTTAGATTTGACACAACTAAATaGGGACATGAAGAAATGAGATCAAGGGATTCCCAACTAACACCT | + |
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Preference number: 1 (lower is better) Translates to: KPRPITLLFRFDTTK*GHEEMRSRDSQLTP Trigger: AGGTGTTAGTTGGGAATCCCTTGATCTCATTTCTTCATGTCCTCATTTAGTTGTGTCAAATCTAAACAACAGTGTAATGGGTCTGGGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR TCA 90 bp | GGTTCAAATCCAGGGCCTTATGCTTATAAACAAATGCTCTCATACTaGGTTATTCATTCAGTCCTCTCCAAAATTGTAAATCTGACATAC | + |
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Preference number: 1 (lower is better) Translates to: GSNPGPYAYKQMLSY*VIHSVLSKIVNLTY Trigger: GTATGTCAGATTTACAATTTTGGAGAGGACTGAATGAATAACTCAGTATGAGAGCATTTGTTTATAAGCATAAGGCCCTGGATTTGAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR GCA 90 bp | TTCTGTTGTTTGTTTGATATCACCAAGAGTTTTAATGTGCTTGTTTaGATCCATTATTTTCCCTTGCAATGTCTCTGTTCAACCGCATAT | + |
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Preference number: 1 (lower is better) Translates to: FCCLFDITKSFNVLV*IHYFPLQCLCSTAY Trigger: ATATGCGGTTGAACAGAGACATTGCAAGGGAAAATAATGGATGCAAACAAGCACATTAAAACTCTTGGTGATATCAAACAAACAACAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCAAGAGGATCACCATAGCTCATCCTACCCCTACCCCCTGGGCTGCACAACATCCCTGTATCCTGAATaGCCTAACCTATTGTTCACA | + |
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Preference number: 2 (lower is better) Translates to: SQEDHHSSSYPYPLGCTTSLYPE*PNLLFT Trigger: TGTGAACAATAGGTTAGGTCATTCAGGATACAGGGA...TGTTGTGCAGCCCAGGGGGTAGGGGTAGGATGAGCTATGGTGATCCTCTTGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR-3UTR GCA 90 bp | AGTCAAGAGGATCACCATAGCTCATCCTACCCCTACCCCCTGGGCTGCACAACAATATTCTGTAGGCAATaGTGTATTCAGCCAAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: SQEDHHSSSYPYPLGCTTIFCRQ*CIQPSH Trigger: ATGACTTGGCTGAATACAGCATTGCCTACAGAATAT...TGTTGTGCAGCCCAGGGGGTAGGGGTAGGATGAGCTATGGTGATCCTCTTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR-3UTR GCA 90 bp | AGTCAAGAGGATCACCATAGCTCATCCTACCCCTACCCCCTGGGCTGCACAACACTTAGTCAAATTCTTTaGAATGAAGACATGGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: SQEDHHSSSYPYPLGCTTLSQIL*NEDMEG Trigger: ACCTTCCATGTCTTCATTGCAAAGAATTTGACTAAG...TGTTGTGCAGCCCAGGGGGTAGGGGTAGGATGAGCTATGGTGATCCTCTTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAACAAGAGTCAAAACCTACAGAATCCAGACTCAAACCCAGACCCATTACACTTCTTCACACTCATGTaGACATCCTTTGACTTAGCC | + |
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Preference number: 2 (lower is better) Translates to: ENKSQNLQNPDSNPDPLHFFTLM*TSFDLA Trigger: GGCTAAGTCAAAGGATGTTCACATGAGTGTGAAGAA...GTGTAATGGGTCTGGGTTTGAGTCTGGATTCTGTAGGTTTTGACTCTTGTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAACAAGAGTCAAAACCTACAGAATCCAGACTCAAACCCAGACCCATTACACACACTGAGCAAACATTaGTCCACTTTCTCCTATGTT | + |
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Preference number: 2 (lower is better) Translates to: ENKSQNLQNPDSNPDPLHTLSKH*STFSYV Trigger: AACATAGGAGAAAGTGGATCAATGTTTGCTCAGTGT...GTGTAATGGGTCTGGGTTTGAGTCTGGATTCTGTAGGTTTTGACTCTTGTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR CAA 90 bp | AGAAGAACGAAAATGAAAGTGTGGACACTTTGCTCCTTCTTAGAATaGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGATTG | + |
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Preference number: 2 (lower is better) Translates to: RRTKMKVWTLCSFLE*GTKHPWKELQRQRL Trigger: CAATCTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGAGCAAAGTGTCCACACTTTCATTTTCGTTCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR CAA 90 bp | TCCCAACTAACACCTATTGCTGTTTCAGCTGACACTGAGCAAACATaGATCCACTTTCTCCTATGTTTTTCATTAGACAGTAAGACAAGA | + |
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Preference number: 2 (lower is better) Translates to: SQLTPIAVSADTEQT*IHFLLCFSLDSKTR Trigger: TCTTGTCTTACTGTCTAATGAAAAACATAGGAGAAAGTGGATCAATGTTTGCTCAGTGTCAGCTGAAACAGCAATAGGTGTTAGTTGGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR CAA 90 bp | AAACACATTAAACGCAAGAAGAACGAAAATGAAAGTGTGGACACTTaGCTCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: KHIKRKKNENESVDT*LLLRIGNKTPMEGV Trigger: AACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGAGCAAAGTGTCCACACTTTCATTTTCGTTCTTCTTGCGTTTAATGTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR-3UTR CCA 90 bp | AGACATGGAAGGTCCTTATACTCACATGCTCACCCTAAGGTCCATAAAGGAAAAAGACAAGAGTTAATATaGCATTTTCCCTCCAAACTT | + |
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Preference number: 2 (lower is better) Translates to: RHGRSLYSHAHPKVHKGKRQELI*HFPSKL Trigger: AAGTTTGGAGGGAAAATGCCATATTAACTCTTGTCT...TTTTCCTTTATGGACCTTAGGGTGAGCATGTGAGTATAAGGACCTTCCATGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR-3UTR CCA 90 bp | GACTTAGCCTTCTCCCATACCATTCATCTATTTCCCAAAACAATTCCTATTCATAGCTTTTCAAAACTGTaGTTCAAATCCAGGGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: DLAFSHTIHLFPKTIPIHSFSKL*FKSRAL Trigger: TAAGGCCCTGGATTTGAACCACAGTTTTGAAAAGCT...ATGAATAGGAATTGTTTTGGGAAATAGATGAATGGTATGGGAGAAGGCTAAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCTCCAGGACATTTTGTATCATTCTTTCCATACAAATTCACAGACACAAACACAAATGCTCTCATACTaGGTTATTCATTCAGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: FLQDILYHSFHTNSQTQTQMLSY*VIHSVL Trigger: GAGGACTGAATGAATAACTCAGTATGAGAGCATTTG...TGTTTGTGTCTGTGAATTTGTATGGAAAGAATGATACAAAATGTCCTGGAGGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR-3UTR GCA 90 bp | ATCAGCTGTCCAGAATCTAAGACTGAGAAAACAAGAGTCAAAACCTACAGAATCCACAACAAACCAATATaGCTTGTGAGACTTTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: ISCPESKTEKTRVKTYRIHNKPI*LVRLFL Trigger: TAAGAAAAGTCTCACAAGGCATATTGGTTTGTTGTG...GATTCTGTAGGTTTTGACTCTTGTTTTCTCAGTCTTAGATTCTGGACAGCTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR-3UTR CCA 90 bp | GACTTAGCCTTCTCCCATACCATTCATCTATTTCCCAAAACAATTCCTATTCATATTCCGACCATTATTTaGATTATTTGGATTTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: DLAFSHTIHLFPKTIPIHIPTII*IIWIWR Trigger: CCTCCAAATCCAAATAATCCAAATAATGGTCGGAAT...ATGAATAGGAATTGTTTTGGGAAATAGATGAATGGTATGGGAGAAGGCTAAGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR CCA 72 bp | GTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCATaGGTCCTTTCTCTGGCTCCTCCATTGGGGACATTG | + |
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Preference number: 3 (lower is better) Translates to: VPPIGLQIPLAP*VLSLAPPLGTL Trigger: CAATGTCCCCAATGGAGGAGCCAGAGAAAGGACCCATGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR-3UTR CAA 90 bp | AGTCAAGAGGATCACCATAGCTCATCCTACCCCTACCCCCTGGGCTGCACAACATCCAAACTTCATCTTTaGGAGAAACAAATGACCCTT | + |
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Preference number: 3 (lower is better) Translates to: SQEDHHSSSYPYPLGCTTSKLHL*EKQMTL Trigger: AAGGGTCATTTGTTTCTCCAAAAGATGAAGTTTGGA...TGTTGTGCAGCCCAGGGGGTAGGGGTAGGATGAGCTATGGTGATCCTCTTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR-3UTR CAA 90 bp | AGTCAAGAGGATCACCATAGCTCATCCTACCCCTACCCCCTGGGCTGCACAACAAGACCCATTACACTGTaGTTTAGATTTGACACAACT | + |
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Preference number: 3 (lower is better) Translates to: SQEDHHSSSYPYPLGCTTRPITL*FRFDTT Trigger: AGTTGTGTCAAATCTAAACAACAGTGTAATGGGTCT...TGTTGTGCAGCCCAGGGGGTAGGGGTAGGATGAGCTATGGTGATCCTCTTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR TCA 72 bp | ACCCATGGAAGGAGTTACAGAGACAAAGATTGGAGCTaGGAAGAAAGGATGAACCATCTAGTGACTGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: THGRSYRDKDWS*EERMNHLVTAI Trigger: TATGGCAGTCACTAGATGGTTCATCCTTTCTTCTCAGCTCCAATCTTTGTCTCTGTAACTCCTTCCATGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR GCA 72 bp | AACGCAAGAAGAACGAAAATGAAAGTGTGGACACTTTaGTCCTTCTTAGAATTGGGAACAAAACACCCATGG | + |
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Preference number: 3 (lower is better) Translates to: NARRTKMKVWTL*SFLELGTKHPW Trigger: CCATGGGTGTTTTGTTCCCAATTCTAAGAAGGAGCAAAGTGTCCACACTTTCATTTTCGTTCTTCTTGCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR-3UTR CAA 90 bp | GAAAACAAGAGTCAAAACCTACAGAATCCAGACTCAAACCCAGACCCATTACACTTCCTCCAGGACATTTaGTATCATTCTTTCCATACA | + |
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Preference number: 3 (lower is better) Translates to: ENKSQNLQNPDSNPDPLHFLQDI*YHSFHT Trigger: TGTATGGAAAGAATGATACAAAATGTCCTGGAGGAA...GTGTAATGGGTCTGGGTTTGAGTCTGGATTCTGTAGGTTTTGACTCTTGTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR-3UTR CAA 90 bp | GAAAACAAGAGTCAAAACCTACAGAATCCAGACTCAAACCCAGACCCATTACACAAGGCTTTCTGTTGTTaGTTTGATATCACCAAGAGT | + |
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Preference number: 3 (lower is better) Translates to: ENKSQNLQNPDSNPDPLHKAFCC*FDITKS Trigger: ACTCTTGGTGATATCAAACAAACAACAGAAAGCCTT...GTGTAATGGGTCTGGGTTTGAGTCTGGATTCTGTAGGTTTTGACTCTTGTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR-3UTR CAA 90 bp | ATCAGCTGTCCAGAATCTAAGACTGAGAAAACAAGAGTCAAAACCTACAGAATCGACACTGAGCAAACATaGATCCACTTTCTCCTATGT | + |
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Preference number: 3 (lower is better) Translates to: ISCPESKTEKTRVKTYRIDTEQT*IHFLLC Trigger: ACATAGGAGAAAGTGGATCAATGTTTGCTCAGTGTC...GATTCTGTAGGTTTTGACTCTTGTTTTCTCAGTCTTAGATTCTGGACAGCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR GCA 72 bp | GTGGTTCAAATCCAGGGCCTTATGCTTATAAACAAATaGTCTCATACTGAGTTATTCATTCAGTCCTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: VVQIQGLMLINK*SHTELFIQSSP Trigger: TGGAGAGGACTGAATGAATAACTCAGTATGAGAGCATTTGTTTATAAGCATAAGGCCCTGGATTTGAACCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR TCA 72 bp | TATCAGGGTTCCTTTCAGCAAAACCTTGCTAGTGTGTaGTGCAATTTGCAAAACACATTAAACGCAAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: YQGSFQQNLASV*CNLQNTLNARR Trigger: TCTTCTTGCGTTTAATGTGTTTTGCAAATTGCATCACACACTAGCAAGGTTTTGCTGAAAGGAACCCTGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR-3UTR CAA 90 bp | ATCAGCTGTCCAGAATCTAAGACTGAGAAAACAAGAGTCAAAACCTACAGAATCCACTGTTGTTTAGATTaGACACAACTAAATGAGGAC | + |
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Preference number: 3 (lower is better) Translates to: ISCPESKTEKTRVKTYRIHCCLD*TQLNED Trigger: GTCCTCATTTAGTTGTGTCAAATCTAAACAACAGTG...GATTCTGTAGGTTTTGACTCTTGTTTTCTCAGTCTTAGATTCTGGACAGCTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR TCA 72 bp | CCCATTACACTGTTGTTTAGATTTGACACAACTAAATaGGGACATGAAGAAATGAGATCAAGGGATTCCCAA | + |
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Preference number: 3 (lower is better) Translates to: PITLLFRFDTTK*GHEEMRSRDSQ Trigger: TTGGGAATCCCTTGATCTCATTTCTTCATGTCCTCATTTAGTTGTGTCAAATCTAAACAACAGTGTAATGGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR GCA 72 bp | TCAAATGTTGTAAAGCATGGAGTAGTGGTGCATGCATaGAATCTTAGTACTCAAAAGATAAAGTCAAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: SNVVKHGVVVHA*NLSTQKIKSRG Trigger: TCCTCTTGACTTTATCTTTTGAGTACTAAGATTGCATGCATGCACCACTACTCCATGCTTTACAACATTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR TCA 72 bp | CCAGGGCCTTATGCTTATAAACAAATGCTCTCATACTaGGTTATTCATTCAGTCCTCTCCAAAATTGTAAAT | + |
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Preference number: 3 (lower is better) Translates to: PGPYAYKQMLSY*VIHSVLSKIVN Trigger: ATTTACAATTTTGGAGAGGACTGAATGAATAACTCAGTATGAGAGCATTTGTTTATAAGCATAAGGCCCTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR TCA 72 bp | GAATGGTACTATTTCTTCAATAAAATCTGTTCAAAATaGACTCATGAGACCTGGTGCTTGTCTAGCATGAGA | + |
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Preference number: 3 (lower is better) Translates to: EWYYFFNKICSK*THETWCLSSMR Trigger: TCTCATGCTAGACAAGCACCAGGTCTCATGAGTTCATTTTGAACAGATTTTATTGAAGAAATAGTACCATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR CCA 72 bp | AACACATTAAACGCAAGAAGAACGAAAATGAAAGTGTaGACACTTTGCTCCTTCTTAGAATTGGGAACAAAA | + |
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Preference number: 3 (lower is better) Translates to: NTLNARRTKMKV*TLCSFLELGTK Trigger: TTTTGTTCCCAATTCTAAGAAGGAGCAAAGTGTCCACACTTTCATTTTCGTTCTTCTTGCGTTTAATGTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR TCA 72 bp | ATATTAATTATTCTTCACACTCATGTGAACATCCTTTaGCTTAGCCTTCTCCCATACCATTCATCTATTTCC | + |
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Preference number: 3 (lower is better) Translates to: ILIILHTHVNIL*LSLLPYHSSIS Trigger: GGAAATAGATGAATGGTATGGGAGAAGGCTAAGTCAAAGGATGTTCACATGAGTGTGAAGAATAATTAATAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| CDS-3UTR GCA 90 bp | AGTCAAGAGGATCACCATAGCTCATCCTACCCCTACCCCCTGGGCTGCACAACATCTGTCATAGGCCATTaGTGTCAAAATGTAGCACTC | + |
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Preference number: 4 (lower is better) Translates to: SQEDHHSSSYPYPLGCTTSVIGH*CQNVAL Trigger: GAGTGCTACATTTTGACAGCAATGGCCTATGACAGA...TGTTGTGCAGCCCAGGGGGTAGGGGTAGGATGAGCTATGGTGATCCTCTTGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| CDS-3UTR TCA 90 bp | GAAAACAAGAGTCAAAACCTACAGAATCCAGACTCAAACCCAGACCCATTACACAGCCTTCACAGAAGGTaGGTCTCAGCATGCAAACAA | + |
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Preference number: 4 (lower is better) Translates to: ENKSQNLQNPDSNPDPLHSLHRR*VSACKQ Trigger: TTGTTTGCATGCTGAGACTCACCTTCTGTGAAGGCT...GTGTAATGGGTCTGGGTTTGAGTCTGGATTCTGTAGGTTTTGACTCTTGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| CDS-3UTR CCA 90 bp | GAAAACAAGAGTCAAAACCTACAGAATCCAGACTCAAACCCAGACCCATTACACAAGAAAAGAGGCATCTaGAGCTCTGGCTGCTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: ENKSQNLQNPDSNPDPLHKKRGI*SSGCCV Trigger: AACACAGCAGCCAGAGCTCCAGATGCCTCTTTTCTT...GTGTAATGGGTCTGGGTTTGAGTCTGGATTCTGTAGGTTTTGACTCTTGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| CDS-3UTR TCA 90 bp | TTCCTCCAGGACATTTTGTATCATTCTTTCCATACAAATTCACAGACACAAACACCTGATAGGACATGGTaGCCTGGTAAAGCAGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: FLQDILYHSFHTNSQTQTPDRTW*PGKAGA Trigger: AGCCCCTGCTTTACCAGGTCACCATGTCCTATCAGG...TGTTTGTGTCTGTGAATTTGTATGGAAAGAATGATACAAAATGTCCTGGAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| CDS-3UTR CCA 90 bp | GACTTAGCCTTCTCCCATACCATTCATCTATTTCCCAAAACAATTCCTATTCATAAACAATGTGGGCTATaGCACCCACAAGCCCCATCA | + |
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Preference number: 4 (lower is better) Translates to: DLAFSHTIHLFPKTIPIHKQCGL*HPQAPS Trigger: TGATGGGGCTTGTGGGTGCCATAGCCCACATTGTTT...ATGAATAGGAATTGTTTTGGGAAATAGATGAATGGTATGGGAGAAGGCTAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| CDS-3UTR CCA 90 bp | GACTTAGCCTTCTCCCATACCATTCATCTATTTCCCAAAACAATTCCTATTCATAGCATGCAAACAATGTaGGCTATGGCACCCACAAGC | + |
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Preference number: 4 (lower is better) Translates to: DLAFSHTIHLFPKTIPIHSMQTM*AMAPTS Trigger: GCTTGTGGGTGCCATAGCCCACATTGTTTGCATGCT...ATGAATAGGAATTGTTTTGGGAAATAGATGAATGGTATGGGAGAAGGCTAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| CDS-3UTR TCA 90 bp | ATTAAATCTAGGTATTGCCTACAGAACCTAGTGAGGTACAAGATGAACATGTACATGGGGGTGTGCAGGTaGGGATTCAAAACAATCAGA | + |
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Preference number: 4 (lower is better) Translates to: IKSRYCLQNLVRYKMNMYMGVCR*GFKTIR Trigger: TCTGATTGTTTTGAATCCTCACCTGCACACCCCCAT...GTACATGTTCATCTTGTACCTCACTAGGTTCTGTAGGCAATACCTAGATTTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| CDS-3UTR TCA 90 bp | ATTAAATCTAGGTATTGCCTACAGAACCTAGTGAGGTACAAGATGAACATGTACAAAGAGAAACAGCTATaGAATGGGAGCCACAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: IKSRYCLQNLVRYKMNMYKEKQL*NGSHRS Trigger: GGACCTGTGGCTCCCATTTCATAGCTGTTTCTCTTT...GTACATGTTCATCTTGTACCTCACTAGGTTCTGTAGGCAATACCTAGATTTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| CDS-3UTR GCA 90 bp | GACTTAGCCTTCTCCCATACCATTCATCTATTTCCCAAAACAATTCCTATTCATCAGGGGCTTACAGATTaGAGCATATCTGTCATAGGC | + |
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Preference number: 4 (lower is better) Translates to: DLAFSHTIHLFPKTIPIHQGLTD*SISVIG Trigger: GCCTATGACAGATATGCTGCAATCTGTAAGCCCCTG...ATGAATAGGAATTGTTTTGGGAAATAGATGAATGGTATGGGAGAAGGCTAAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| CDS-3UTR CCA 90 bp | ATCAGCTGTCCAGAATCTAAGACTGAGAAAACAAGAGTCAAAACCTACAGAATCGAAACAGCTATGAAATaGGAGCCACAGGTCCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: ISCPESKTEKTRVKTYRIETAMK*EPQVLN Trigger: ATTCAGGACCTGTGGCTCCCATTTCATAGCTGTTTC...GATTCTGTAGGTTTTGACTCTTGTTTTCTCAGTCTTAGATTCTGGACAGCTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| CDS-3UTR TCA 90 bp | AGACATGGAAGGTCCTTATACTCACATGCTCACCCTAAGGTCCATAAAGGAAAATTTATCATCATCCACTaGTGCACTAGAAGGTTTAAG | + |
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Preference number: 4 (lower is better) Translates to: RHGRSLYSHAHPKVHKGKFIIIH*CTRRFK Trigger: CTTAAACCTTCTAGTGCATCAGTGGATGATGATAAA...TTTTCCTTTATGGACCTTAGGGTGAGCATGTGAGTATAAGGACCTTCCATGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| CDS-3UTR CCA 90 bp | GAAAACAAGAGTCAAAACCTACAGAATCCAGACTCAAACCCAGACCCATTACACAAACGGATTCAACATTaGGCCCACAATGGTATAAAA | + |
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Preference number: 4 (lower is better) Translates to: ENKSQNLQNPDSNPDPLHKRIQH*AHNGIK Trigger: TTTTATACCATTGTGGGCCCAATGTTGAATCCGTTT...GTGTAATGGGTCTGGGTTTGAGTCTGGATTCTGTAGGTTTTGACTCTTGTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR CAA 72 bp | AAAATGAAAGTGTGGACACTTTGCTCCTTCTTAGAATaGGGAACAAAACACCCATGGAAGGAGTTACAGAGA | + |
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Preference number: 4 (lower is better) Translates to: KMKVWTLCSFLE*GTKHPWKELQR Trigger: TCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGAGCAAAGTGTCCACACTTTCATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR CAA 72 bp | AAACGCAAGAAGAACGAAAATGAAAGTGTGGACACTTaGCTCCTTCTTAGAATTGGGAACAAAACACCCATG | + |
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Preference number: 4 (lower is better) Translates to: KRKKNENESVDT*LLLRIGNKTPM Trigger: CATGGGTGTTTTGTTCCCAATTCTAAGAAGGAGCAAAGTGTCCACACTTTCATTTTCGTTCTTCTTGCGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| CDS-3UTR GCA 90 bp | ATCAGCTGTCCAGAATCTAAGACTGAGAAAACAAGAGTCAAAACCTACAGAATCCTGAGTCATACACTCTaGATGAGAGATGATGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: ISCPESKTEKTRVKTYRILSHTL*MRDDVL Trigger: CAAAACATCATCTCTCATGCAGAGTGTATGACTCAG...GATTCTGTAGGTTTTGACTCTTGTTTTCTCAGTCTTAGATTCTGGACAGCTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| 3UTR CAA 72 bp | CATGTGCTTACACAGACACTAGTAATTGCAGCTATGTaGGAACTACTAGCAGATCATCATCAACCTGAATTT | + |
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Preference number: 4 (lower is better) Translates to: HVLTQTLVIAAM*ELLADHHQPEF Trigger: AAATTCAGGTTGATGATGATCTGCTAGTAGTTCCAACATAGCTGCAATTACTAGTGTCTGTGTAAGCACATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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| CDS-3UTR CAA 90 bp | GAAAACAAGAGTCAAAACCTACAGAATCCAGACTCAAACCCAGACCCATTACACATGAGAGATGATGTTTaGCTTCACAAAACCCACCAG | + |
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Preference number: 5 (lower is better) Translates to: ENKSQNLQNPDSNPDPLHMRDDV*LHKTHQ Trigger: CTGGTGGGTTTTGTGAAGCAAAACATCATCTCTCAT...GTGTAATGGGTCTGGGTTTGAGTCTGGATTCTGTAGGTTTTGACTCTTGTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213458.2 |
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