Pregenerated sensors for OLFR889 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096356Ensembl transcript IDs: ENSMUST00000217286.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCCCATTGGTTGTGCAAACTTTATATGCCTCAGTACAGGCGAATaGCAGGGCCAAGAACTGGGAGTGGGTGGGTGGGCAAGTGGGTGG | + |
|
Preference number: 1 (lower is better) Translates to: RPIGCANFICLSTGE*QGQELGVGGWASGW Trigger: CCACCCACTTGCCCACCCACCCACTCCCAGTTCTTGGCCCTGGCATTCGCCTGTACTGAGGCATATAAAGTTTGCACAACCAATGGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CCA 90 bp | ATGCCTCAGTACAGGCGAATGCCAGGGCCAAGAACTGGGAGTGGGTaGGTGGGCAAGTGGGTGGGGGACTTTTGGGATAGCATTGGAAAT | + |
|
Preference number: 1 (lower is better) Translates to: MPQYRRMPGPRTGSG*VGKWVGDFWDSIGN Trigger: ATTTCCAATGCTATCCCAAAAGTCCCCCACCCACTTGCCCACCCACCCACTCCCAGTTCTTGGCCCTGGCATTCGCCTGTACTGAGGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CCA 90 bp | AGGCGAATGCCAGGGCCAAGAACTGGGAGTGGGTGGGTGGGCAAGTaGGTGGGGGACTTTTGGGATAGCATTGGAAATGTAAATGAAATA | + |
|
Preference number: 1 (lower is better) Translates to: RRMPGPRTGSGWVGK*VGDFWDSIGNVNEI Trigger: TATTTCATTTACATTTCCAATGCTATCCCAAAAGTCCCCCACCCACTTGCCCACCCACCCACTCCCAGTTCTTGGCCCTGGCATTCGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CCA 90 bp | GCGTCAGATCTCGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTaGTATTTGAACTCTGGACCTTTGGAAGAACAGTCGGGTGCTCTT | + |
|
Preference number: 1 (lower is better) Translates to: ASDLVMDGCEPPCGC*YLNSGPLEEQSGAL Trigger: AAGAGCACCCGACTGTTCTTCCAAAGGTCCAGAGTTCAAATACCAGCAACCACATGGTGGCTCACAACCATCCATAACGAGATCTGACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CCA 90 bp | CAACAACCAAGTTTGATCTCAGCTTTCCTGTGGGTTCCTCAAGTATaGGTCTCCCAGTTTCTCAGTTTCCATGGCTGGAGCCCTCAGGAA | + |
|
Preference number: 1 (lower is better) Translates to: QQPSLISAFLWVPQV*VSQFLSFHGWSPQE Trigger: TTCCTGAGGGCTCCAGCCATGGAAACTGAGAAACTGGGAGACCCATACTTGAGGAACCCACAGGAAAGCTGAGATCAAACTTGGTTGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR TCA 90 bp | ATCTCGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGTATTTaGACTCTGGACCTTTGGAAGAACAGTCGGGTGCTCTTACCCACT | + |
|
Preference number: 1 (lower is better) Translates to: ISLWMVVSHHVVAGI*TLDLWKNSRVLLPT Trigger: AGTGGGTAAGAGCACCCGACTGTTCTTCCAAAGGTCCAGAGTTCAAATACCAGCAACCACATGGTGGCTCACAACCATCCATAACGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR GCA 90 bp | GTCTCTTGTGAGATTATGCCAGGGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGATTGATCACAGGAACCCCAATGGAG | + |
|
Preference number: 1 (lower is better) Translates to: VSCEIMPGPSKHRSG*SQSAIGLITGTPME Trigger: CTCCATTGGGGTTCCTGTGATCAATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCTGGCATAATCTCACAAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CCA 90 bp | TCTCTAGCTGCGTATGTATCAGAAGATGGCCTAGTCGGCCATCAGTaGAAAGAGAGGCCCATTGGTTGTGCAAACTTTATATGCCTCAGT | + |
|
Preference number: 1 (lower is better) Translates to: SLAAYVSEDGLVGHQ*KERPIGCANFICLS Trigger: ACTGAGGCATATAAAGTTTGCACAACCAATGGGCCTCTCTTTCCACTGATGGCCGACTAGGCCATCTTCTGATACATACGCAGCTAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CCA 90 bp | CAGATACTGGTTGGCCAGGGCTATACATGGAATTCTAGATTTCCATaGTGTAGCACTAAGCCACACAAGACAGGGGTTTATAATGGCAGT | + |
|
Preference number: 1 (lower is better) Translates to: QILVGQGYTWNSRFP*CSTKPHKTGVYNGS Trigger: ACTGCCATTATAAACCCCTGTCTTGTGTGGCTTAGTGCTACACCATGGAAATCTAGAATTCCATGTATAGCCCTGGCCAACCAGTATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CCA 90 bp | CTTCATTTATATATGCAACAACCAAGTTTGATCTCAGCTTTCCTGTaGGTTCCTCAAGTATGGGTCTCCCAGTTTCTCAGTTTCCATGGC | + |
|
Preference number: 1 (lower is better) Translates to: LHLYMQQPSLISAFL*VPQVWVSQFLSFHG Trigger: GCCATGGAAACTGAGAAACTGGGAGACCCATACTTGAGGAACCCACAGGAAAGCTGAGATCAAACTTGGTTGTTGCATATATAAATGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR TCA 90 bp | CTTTCAGAGGATTTTCCTCTTTCCACTATTGGCCAAAGAGGGTTATaGCTTCTCAGCGATTTGTTAGAGTGTTATCCATGTTCAGAATGG | + |
|
Preference number: 1 (lower is better) Translates to: LSEDFPLSTIGQRGL*LLSDLLECYPCSEW Trigger: CCATTCTGAACATGGATAACACTCTAACAAATCGCTGAGAAGTCATAACCCTCTTTGGCCAATAGTGGAAAGAGGAAAATCCTCTGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR GCA 90 bp | TACCGCTCTTGCAGATATGACATAGGGAAGAATGGCTTTAGGAAATaGCTCAAAAATATTCTCACAATGAAATATTTCTTCAGTCTGCTC | + |
|
Preference number: 1 (lower is better) Translates to: YRSCRYDIGKNGFRK*LKNILTMKYFFSLL Trigger: GAGCAGACTGAAGAAATATTTCATTGTGAGAATATTTTTGAGGCATTTCCTAAAGCCATTCTTCCCTATGTCATATCTGCAAGAGCGGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR GCA 90 bp | CATTATCTCCAATTAAGACATAGCAGGTCCATATATTCACATACCTaGCTTGAAGTCCATGAGGATAAAATCTACTATAGGTTTCCTTAT | + |
|
Preference number: 1 (lower is better) Translates to: HYLQLRHSRSIYSHT*LEVHEDKIYYRFPY Trigger: ATAAGGAAACCTATAGTAGATTTTATCCTCATGGACTTCAAGGCAGGTATGTGAATATATGGACCTGCTATGTCTTAATTGGAGATAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CCA 90 bp | CCATGGTGTAGCACTAAGCCACACAAGACAGGGGTTTATAATGGCAGTGAGACTGGGTGGGTGGGCAAGTaGGTGGGGGACTTTTGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: PWCSTKPHKTGVYNGSETGWVGK*VGDFWD Trigger: ATCCCAAAAGTCCCCCACCCACTTGCCCACCCACCC...AGTCTCACTGCCATTATAAACCCCTGTCTTGTGTGGCTTAGTGCTACACCATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCCTCAAGTATGGGTCTCCCAGTTTCTCAGTTTCCATGGCTGGAGCCCTCAGGCTAGTCGGCCATCAGTaGAAAGAGAGGCCCATTGGT | + |
|
Preference number: 2 (lower is better) Translates to: FLKYGSPSFSVSMAGALRLVGHQ*KERPIG Trigger: ACCAATGGGCCTCTCTTTCCACTGATGGCCGACTAG...CCTGAGGGCTCCAGCCATGGAAACTGAGAAACTGGGAGACCCATACTTGAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR TCA 90 bp | GTACAGGCGAATGCCAGGGCCAAGAACTGGGAGTGGGTGGGTGGGCAAGTGGGTATCTCACCAGCCCCTTaGTTTATTTTCAATACTCAA | + |
|
Preference number: 2 (lower is better) Translates to: VQANARAKNWEWVGGQVGISPAP*FIFNTQ Trigger: TTGAGTATTGAAAATAAATCAAGGGGCTGGTGAGAT...ACCCACTTGCCCACCCACCCACTCCCAGTTCTTGGCCCTGGCATTCGCCTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR GCA 90 bp | GTACAGGCGAATGCCAGGGCCAAGAACTGGGAGTGGGTGGGTGGGCAAGTGGGTAATATTTCTTCAGTCTaGTCCCTAGTCATAAAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: VQANARAKNWEWVGGQVGNISSV*SLVIKD Trigger: ATCCTTTATGACTAGGGAGCAGACTGAAGAAATATT...ACCCACTTGCCCACCCACCCACTCCCAGTTCTTGGCCCTGGCATTCGCCTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCCTCAAGTATGGGTCTCCCAGTTTCTCAGTTTCCATGGCTGGAGCCCTCAGGGTTTCCATCTGTCTTTaGGTCTTTCAGGATGGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: FLKYGSPSFSVSMAGALRVSICL*VFQDGG Trigger: GCCTCCATCCTGAAAGACCCAAAGACAGATGGAAAC...CCTGAGGGCTCCAGCCATGGAAACTGAGAAACTGGGAGACCCATACTTGAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CAA 90 bp | GATCTCGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGTATTaGAACTCTGGACCTTTGGAAGAACAGTCGGGTGCTCTTACCCAC | + |
|
Preference number: 2 (lower is better) Translates to: DLVMDGCEPPCGCWY*NSGPLEEQSGALTH Trigger: GTGGGTAAGAGCACCCGACTGTTCTTCCAAAGGTCCAGAGTTCAAATACCAGCAACCACATGGTGGCTCACAACCATCCATAACGAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGCAAATGCCCATATCTCATTGGGACATCAAAATATGATCCTGGGTGTTCAGCCAAGAACTGGGAGTaGGTGGGTGGGCAAGTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: SSKCPYLIGTSKYDPGCSAKNWE*VGGQVG Trigger: ACCCACTTGCCCACCCACCCACTCCCAGTTCTTGGC...TGAACACCCAGGATCATATTTTGATGTCCCAATGAGATATGGGCATTTGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CCA 90 bp | ATATACACACACGTGTCATTGCCTAAGTACAACCATGTTTATATGCAATCACAGGCCAGGGCCAAGAACTaGGAGTGGGTGGGTGGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: IYTHVSLPKYNHVYMQSQARAKN*EWVGGQ Trigger: TTGCCCACCCACCCACTCCCAGTTCTTGGCCCTGGC...CTGTGATTGCATATAAACATGGTTGTACTTAGGCAATGACACGTGTGTGTATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CCA 90 bp | CCATGGTGTAGCACTAAGCCACACAAGACAGGGGTTTATAATGGCAGTGAGACTCTGGTATTTGAACTCTaGACCTTTGGAAGAACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: PWCSTKPHKTGVYNGSETLVFEL*TFGRTV Trigger: GACTGTTCTTCCAAAGGTCCAGAGTTCAAATACCAG...AGTCTCACTGCCATTATAAACCCCTGTCTTGTGTGGCTTAGTGCTACACCATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CAA 90 bp | ACCCATTCAAAGTGGTCCTTAAGATGTAGCCCTGTGGTAGGACACTaGCCAAACATGAAAGAGAGTTGGGATATAATCCCCTCAAACACA | + |
|
Preference number: 2 (lower is better) Translates to: THSKWSLRCSPVVGH*PNMKESWDIIPSNT Trigger: TGTGTTTGAGGGGATTATATCCCAACTCTCTTTCATGTTTGGCAAGTGTCCTACCACAGGGCTACATCTTAAGGACCACTTTGAATGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGCAAGATTTGTTTATAGAAGTAGAGGCAGTGGTTCACATTTTGACCATGATTGGGTGGGCAAGTGGGTaGGGGACTTTTGGGATAGCA | + |
|
Preference number: 2 (lower is better) Translates to: KQDLFIEVEAVVHILTMIGWASG*GTFGIA Trigger: TGCTATCCCAAAAGTCCCCCACCCACTTGCCCACCC...AATCATGGTCAAAATGTGAACCACTGCCTCTACTTCTATAAACAAATCTTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCACTAAATGTACCCATTCAAAGTGGTCCTTAAGATGTAGCCCTGTGGTAGGATTCCTTTTCCAGTTTTaGGGAGACAGATATGGGATT | + |
|
Preference number: 2 (lower is better) Translates to: ATKCTHSKWSLRCSPVVGFLFQF*GDRYGI Trigger: AATCCCATATCTGTCTCCCCAAAACTGGAAAAGGAA...TCCTACCACAGGGCTACATCTTAAGGACCACTTTGAATGGGTACATTTAGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CCA 90 bp | CCATGGTGTAGCACTAAGCCACACAAGACAGGGGTTTATAATGGCAGTGAGACTAACATGAAAGAGAGTTaGGATATAATCCCCTCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: PWCSTKPHKTGVYNGSETNMKES*DIIPSN Trigger: GTTTGAGGGGATTATATCCCAACTCTCTTTCATGTT...AGTCTCACTGCCATTATAAACCCCTGTCTTGTGTGGCTTAGTGCTACACCATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGCAAATGCCCATATCTCATTGGGACATCAAAATATGATCCTGGGTGTTCAGGCCAGGGCTATACATaGAATTCTAGATTTCCATGG | + |
|
Preference number: 2 (lower is better) Translates to: SSKCPYLIGTSKYDPGCSGQGYT*NSRFPW Trigger: CCATGGAAATCTAGAATTCCATGTATAGCCCTGGCC...TGAACACCCAGGATCATATTTTGATGTCCCAATGAGATATGGGCATTTGCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR TCA 90 bp | AACTGCTTTATGACTATGAGAAAAGACCAAAGTGGAAAGGACGTTTCCCTCTTTCCGCTCTTGCAGATATaGCATAGGGAAGAATGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: NCFMTMRKDQSGKDVSLFPLLQI*HREEWL Trigger: AAGCCATTCTTCCCTATGTCATATCTGCAAGAGCGG...AAAGAGGGAAACGTCCTTTCCACTTTGGTCTTTTCTCATAGTCATAAAGCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CAA 90 bp | AGAACACCATACAAAAACCTTCATTTATATATGCAACAACCAAGTTaGATCTCAGCTTTCCTGTGGGTTCCTCAAGTATGGGTCTCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: RTPYKNLHLYMQQPS*ISAFLWVPQVWVSQ Trigger: CTGGGAGACCCATACTTGAGGAACCCACAGGAAAGCTGAGATCAAACTTGGTTGTTGCATATATAAATGAAGGTTTTTGTATGGTGTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR GCA 90 bp | AACTGCTTTATGACTATGAGAAAAGACCAAAGTGGAAAGGACGTTTCCCTCTTTGAGGCCCATTGGTTGTaGAAACTTTATATGCCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: NCFMTMRKDQSGKDVSLFEAHWL*KLYMPQ Trigger: CTGAGGCATATAAAGTTTGCACAACCAATGGGCCTC...AAAGAGGGAAACGTCCTTTCCACTTTGGTCTTTTCTCATAGTCATAAAGCAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGCAAATGCCCATATCTCATTGGGACATCAAAATATGATCCTGGGTGTTCAGAGGTTACATTCTTTTaGTATACACACACGTGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: SSKCPYLIGTSKYDPGCSEVTFF*YTHTCH Trigger: ATGACACGTGTGTGTATATCAAAAGAATGTAACCTC...TGAACACCCAGGATCATATTTTGATGTCCCAATGAGATATGGGCATTTGCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR TCA 90 bp | AATTGGTTTATAGCACATAGTCACCTTAATCAAAATGGTGGTGAAGTTACATGGTGCAACAACCAAGTTTaGTCTCAGCTTTCCTGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: NWFIAHSHLNQNGGEVTWCNNQV*SQLSCG Trigger: CCCACAGGAAAGCTGAGATCAAACTTGGTTGTTGCA...CCATGTAACTTCACCACCATTTTGATTAAGGTGACTATGTGCTATAAACCAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCAGCAAATGCCCATATCTCATTGGGACATCAAAATATGATCCTGGGTGTTCAGAGACTCCATTTATTTaGAGATATACATCGCGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: SSKCPYLIGTSKYDPGCSETPFI*RYTSRN Trigger: ATTGCGCGATGTATATCTGCAAATAAATGGAGTCTC...TGAACACCCAGGATCATATTTTGATGTCCCAATGAGATATGGGCATTTGCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CCA 90 bp | AACTGCTTTATGACTATGAGAAAAGACCAAAGTGGAAAGGACGTTTCCCTCTTTTTGGGGAGACAGATATaGGATTTAACACTCTCCACT | + |
|
Preference number: 2 (lower is better) Translates to: NCFMTMRKDQSGKDVSLFLGRQI*DLTLST Trigger: AGTGGAGAGTGTTAAATCCCATATCTGTCTCCCCAA...AAAGAGGGAAACGTCCTTTCCACTTTGGTCTTTTCTCATAGTCATAAAGCAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR TCA 90 bp | AATGGCAGGTTTCATGATTGTCTTGAGCAAGCAAGATTTGTTTATAGAAGTAGATCAGCTTCCAAACGCTaGCAGCATTGCTTACACTAT | + |
|
Preference number: 2 (lower is better) Translates to: NGRFHDCLEQARFVYRSRSASKR*QHCLHY Trigger: ATAGTGTAAGCAATGCTGTCAGCGTTTGGAAGCTGA...TCTACTTCTATAAACAAATCTTGCTTGCTCAAGACAATCATGAAACCTGCCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTAAGTACAACCATGTTTATATGCAATCACAGCTTTTAGCAAATGGCAGGTTTTGTGCAAACTTTATATaGCTCAGTACAGGCGAATGC | + |
|
Preference number: 2 (lower is better) Translates to: PKYNHVYMQSQLLANGRFCANFI*LSTGEC Trigger: GCATTCGCCTGTACTGAGGCATATAAAGTTTGCACA...AAACCTGCCATTTGCTAAAAGCTGTGATTGCATATAAACATGGTTGTACTTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CCA 90 bp | AATTGGTTTATAGCACATAGTCACCTTAATCAAAATGGTGGTGAAGTTACATGGTCCTCTTTCCACTATTaGCCAAAGAGGGTTATGACT | + |
|
Preference number: 2 (lower is better) Translates to: NWFIAHSHLNQNGGEVTWSSFHY*PKRVMT Trigger: AGTCATAACCCTCTTTGGCCAATAGTGGAAAGAGGA...CCATGTAACTTCACCACCATTTTGATTAAGGTGACTATGTGCTATAAACCAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CCA 90 bp | AATTGGTTTATAGCACATAGTCACCTTAATCAAAATGGTGGTGAAGTTACATGGTGTACCCATTCAAAGTaGTCCTTAAGATGTAGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: NWFIAHSHLNQNGGEVTWCTHSK*SLRCSP Trigger: AGGGCTACATCTTAAGGACCACTTTGAATGGGTACA...CCATGTAACTTCACCACCATTTTGATTAAGGTGACTATGTGCTATAAACCAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR GCA 90 bp | AATGGCAGGTTTCATGATTGTCTTGAGCAAGCAAGATTTGTTTATAGAAGTAGACATTTTTACCGCTCTTaGAGATATGACATAGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: NGRFHDCLEQARFVYRSRHFYRS*RYDIGK Trigger: CTTCCCTATGTCATATCTGCAAGAGCGGTAAAAATG...TCTACTTCTATAAACAAATCTTGCTTGCTCAAGACAATCATGAAACCTGCCATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CCA 90 bp | ATATACACACACGTGTCATTGCCTAAGTACAACCATGTTTATATGCAATCACAGTATCCATGTTCAGAATaGGGAAAGACAACCACTATT | + |
|
Preference number: 2 (lower is better) Translates to: IYTHVSLPKYNHVYMQSQYPCSE*GKTTTI Trigger: AATAGTGGTTGTCTTTCCCCATTCTGAACATGGATA...CTGTGATTGCATATAAACATGGTTGTACTTAGGCAATGACACGTGTGTGTATAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTAAGTACAACCATGTTTATATGCAATCACAGCTTTTAGCAAATGGCAGGTTTTTGGGTCTTTCAGGATaGAGGCAATTTTGTTTCATA | + |
|
Preference number: 2 (lower is better) Translates to: PKYNHVYMQSQLLANGRFLGLSG*RQFCFI Trigger: TATGAAACAAAATTGCCTCCATCCTGAAAGACCCAA...AAACCTGCCATTTGCTAAAAGCTGTGATTGCATATAAACATGGTTGTACTTAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR GCA 72 bp | GAATGCTCAGAGAAAAGAGACTCTGGGTGGGGCAGCTaGAGTAGTGAACAGCGTACAGGAGCAGAAAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ECSEKRDSGWGS*SSEQRTGAESR Trigger: TCTGCTTTCTGCTCCTGTACGCTGTTCACTACTGCAGCTGCCCCACCCAGAGTCTCTTTTCTCTGAGCATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTCAAGTATGGGTCTCCCAGTTTCTCAGTTTCCATGGCTGGAGCCCTCAGGCCTGTGGTAGGACACTaGCCAAACATGAAAGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: FLKYGSPSFSVSMAGALRPVVGH*PNMKES Trigger: ACTCTCTTTCATGTTTGGCAAGTGTCCTACCACAGG...CCTGAGGGCTCCAGCCATGGAAACTGAGAAACTGGGAGACCCATACTTGAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR TCA 72 bp | TGGATGGTTGTGAGCCACCATGTGGTTGCTGGTATTTaGACTCTGGACCTTTGGAAGAACAGTCGGGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: WMVVSHHVVAGI*TLDLWKNSRVL Trigger: GAGCACCCGACTGTTCTTCCAAAGGTCCAGAGTTCAAATACCAGCAACCACATGGTGGCTCACAACCATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CCA 72 bp | TCCTCAAGTATGGGTCTCCCAGTTTCTCAGTTTCCATaGCTGGAGCCCTCAGGAAACCAAACAATGACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SSSMGLPVSQFP*LEPSGNQTMTG Trigger: CCCTGTCATTGTTTGGTTTCCTGAGGGCTCCAGCCATGGAAACTGAGAAACTGGGAGACCCATACTTGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR GCA 72 bp | TGGAAAGAGAGGCCCATTGGTTGTGCAAACTTTATATaGCTCAGTACAGGCGAATGCCAGGGCCAAGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: WKERPIGCANFI*LSTGECQGQEL Trigger: CAGTTCTTGGCCCTGGCATTCGCCTGTACTGAGGCATATAAAGTTTGCACAACCAATGGGCCTCTCTTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR GCA 72 bp | AGTCGGCCATCAGTGGAAAGAGAGGCCCATTGGTTGTaGAAACTTTATATGCCTCAGTACAGGCGAATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SRPSVEREAHWL*KLYMPQYRRMP Trigger: TGGCATTCGCCTGTACTGAGGCATATAAAGTTTGCACAACCAATGGGCCTCTCTTTCCACTGATGGCCGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CCA 72 bp | TTCAGACACTCCAGAAGAGGGCGTCAGATCTCGTTATaGATGGTTGTGAGCCACCATGTGGTTGCTGGTATT | + |
|
Preference number: 3 (lower is better) Translates to: FRHSRRGRQISL*MVVSHHVVAGI Trigger: AATACCAGCAACCACATGGTGGCTCACAACCATCCATAACGAGATCTGACGCCCTCTTCTGGAGTGTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CCA 72 bp | AGTTTGATCTCAGCTTTCCTGTGGGTTCCTCAAGTATaGGTCTCCCAGTTTCTCAGTTTCCATGGCTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLISAFLWVPQV*VSQFLSFHGWS Trigger: GCTCCAGCCATGGAAACTGAGAAACTGGGAGACCCATACTTGAGGAACCCACAGGAAAGCTGAGATCAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR GCA 72 bp | GAGATTATGCCAGGGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGATTGATCACAGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: EIMPGPSKHRSG*SQSAIGLITGT Trigger: GGTTCCTGTGATCAATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCTGGCATAATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CCA 72 bp | CTCGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTaGTATTTGAACTCTGGACCTTTGGAAGAACAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: LVMDGCEPPCGC*YLNSGPLEEQS Trigger: CGACTGTTCTTCCAAAGGTCCAGAGTTCAAATACCAGCAACCACATGGTGGCTCACAACCATCCATAACGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CCA 72 bp | GCGTATGTATCAGAAGATGGCCTAGTCGGCCATCAGTaGAAAGAGAGGCCCATTGGTTGTGCAAACTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: AYVSEDGLVGHQ*KERPIGCANFI Trigger: TATAAAGTTTGCACAACCAATGGGCCTCTCTTTCCACTGATGGCCGACTAGGCCATCTTCTGATACATACGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR TCA 72 bp | CGTACAGGAGCAGAAAGCAGAGAGAGCAGGAAACTCTaGGAGATGACATCATTGAGGTTCTGTTTTCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: RTGAESRESRKL*EMTSLRFCFLW Trigger: CCATAGAAAACAGAACCTCAATGATGTCATCTCTCAGAGTTTCCTGCTCTCTCTGCTTTCTGCTCCTGTACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CCA 72 bp | TTTAGTGGCACAGCCACTAAATGTACCCATTCAAAGTaGTCCTTAAGATGTAGCCCTGTGGTAGGACACTTG | + |
|
Preference number: 3 (lower is better) Translates to: FSGTATKCTHSK*SLRCSPVVGHL Trigger: CAAGTGTCCTACCACAGGGCTACATCTTAAGGACCACTTTGAATGGGTACATTTAGTGGCTGTGCCACTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CCA 72 bp | GTTGGCCAGGGCTATACATGGAATTCTAGATTTCCATaGTGTAGCACTAAGCCACACAAGACAGGGGTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: VGQGYTWNSRFP*CSTKPHKTGVY Trigger: ATAAACCCCTGTCTTGTGTGGCTTAGTGCTACACCATGGAAATCTAGAATTCCATGTATAGCCCTGGCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCACTAAATGTACCCATTCAAAGTGGTCCTTAAGATGTAGCCCTGTGGTAGGAATTCCTTTTCCAGTTTaGGGGAGACAGATATGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: ATKCTHSKWSLRCSPVVGIPFPV*GRQIWD Trigger: ATCCCATATCTGTCTCCCCAAAACTGGAAAAGGAAT...TCCTACCACAGGGCTACATCTTAAGGACCACTTTGAATGGGTACATTTAGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CCA 72 bp | TATATGCAACAACCAAGTTTGATCTCAGCTTTCCTGTaGGTTCCTCAAGTATGGGTCTCCCAGTTTCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: YMQQPSLISAFL*VPQVWVSQFLS Trigger: ACTGAGAAACTGGGAGACCCATACTTGAGGAACCCACAGGAAAGCTGAGATCAAACTTGGTTGTTGCATATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR TCA 72 bp | ACGCTGACAGCATTGCTTACACTATCAAGATTTTGCTaGAAGGCCCCAGATATAGCTGTCTCTTGTGAGATT | + |
|
Preference number: 3 (lower is better) Translates to: TLTALLTLSRFC*KAPDIAVSCEI Trigger: AATCTCACAAGAGACAGCTATATCTGGGGCCTTTCAGCAAAATCTTGATAGTGTAAGCAATGCTGTCAGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR TCA 72 bp | CAGCAAATGCCCATATCTCATTGGGACATCAAAATATaGTCCTGGGTGTTCACCACTCTGACAGAGAATACA | + |
|
Preference number: 3 (lower is better) Translates to: QQMPISHWDIKI*SWVFTTLTENT Trigger: TGTATTCTCTGTCAGAGTGGTGAACACCCAGGATCATATTTTGATGTCCCAATGAGATATGGGCATTTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CCA 72 bp | ACCTACCCTTTCAGAGGATTTTCCTCTTTCCACTATTaGCCAAAGAGGGTTATGACTTCTCAGCGATTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: TYPFRGFSSFHY*PKRVMTSQRFV Trigger: AACAAATCGCTGAGAAGTCATAACCCTCTTTGGCCAATAGTGGAAAGAGGAAAATCCTCTGAAAGGGTAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CCA 72 bp | CCTGTGGTAGGACACTTGCCAAACATGAAAGAGAGTTaGGATATAATCCCCTCAAACACACTCTACAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: PVVGHLPNMKES*DIIPSNTLYKT Trigger: TGTTTTGTAGAGTGTGTTTGAGGGGATTATATCCCAACTCTCTTTCATGTTTGGCAAGTGTCCTACCACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CCA 72 bp | GCATTTATTCAGATACTGGTTGGCCAGGGCTATACATaGAATTCTAGATTTCCATGGTGTAGCACTAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: AFIQILVGQGYT*NSRFPWCSTKP Trigger: TGGCTTAGTGCTACACCATGGAAATCTAGAATTCCATGTATAGCCCTGGCCAACCAGTATCTGAATAAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR GCA 72 bp | ACAGGGGTTTATAATGGCAGTGAGACTCCATTTATTTaGAGATATACATCGCGCAATCAGGAGGTTACATTC | + |
|
Preference number: 3 (lower is better) Translates to: TGVYNGSETPFI*RYTSRNQEVTF Trigger: GAATGTAACCTCCTGATTGCGCGATGTATATCTGCAAATAAATGGAGTCTCACTGCCATTATAAACCCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGCAAATGCCCATATCTCATTGGGACATCAAAATATGATCCTGGGTGTTCACATCTCACCAGCCCCTaGATTTATTTTCAATACTCA | + |
|
Preference number: 3 (lower is better) Translates to: SSKCPYLIGTSKYDPGCSHLTSP*IYFQYS Trigger: TGAGTATTGAAAATAAATCAAGGGGCTGGTGAGATG...TGAACACCCAGGATCATATTTTGATGTCCCAATGAGATATGGGCATTTGCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGCAAATGCCCATATCTCATTGGGACATCAAAATATGATCCTGGGTGTTCAATTCACATACCTGCCTaGAAGTCCATGAGGATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSKCPYLIGTSKYDPGCSIHIPA*KSMRIK Trigger: TTTTATCCTCATGGACTTCAAGGCAGGTATGTGAAT...TGAACACCCAGGATCATATTTTGATGTCCCAATGAGATATGGGCATTTGCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR TCA 72 bp | GATTTTCCTCTTTCCACTATTGGCCAAAGAGGGTTATaGCTTCTCAGCGATTTGTTAGAGTGTTATCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: DFPLSTIGQRGL*LLSDLLECYPC Trigger: ACATGGATAACACTCTAACAAATCGCTGAGAAGTCATAACCCTCTTTGGCCAATAGTGGAAAGAGGAAAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR TCA 72 bp | AGATATACATCGCGCAATCAGGAGGTTACATTCTTTTaGTATACACACACGTGTCATTGCCTAAGTACAACC | + |
|
Preference number: 3 (lower is better) Translates to: RYTSRNQEVTFF*YTHTCHCLSTT Trigger: GGTTGTACTTAGGCAATGACACGTGTGTGTATATCAAAAGAATGTAACCTCCTGATTGCGCGATGTATATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTAAGTACAACCATGTTTATATGCAATCACAGCTTTTAGCAAATGGCAGGTTTGGAAAGAGAGGCCCATaGGTTGTGCAAACTTTATAT | + |
|
Preference number: 3 (lower is better) Translates to: PKYNHVYMQSQLLANGRFGKRGP*VVQTLY Trigger: ATATAAAGTTTGCACAACCAATGGGCCTCTCTTTCC...AAACCTGCCATTTGCTAAAAGCTGTGATTGCATATAAACATGGTTGTACTTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTGGTTTATAGCACATAGTCACCTTAATCAAAATGGTGGTGAAGTTACATGGTTATTCAGATACTGGTaGGCCAGGGCTATACATGGA | + |
|
Preference number: 3 (lower is better) Translates to: NWFIAHSHLNQNGGEVTWLFRYW*ARAIHG Trigger: TCCATGTATAGCCCTGGCCAACCAGTATCTGAATAA...CCATGTAACTTCACCACCATTTTGATTAAGGTGACTATGTGCTATAAACCAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTGGTTTATAGCACATAGTCACCTTAATCAAAATGGTGGTGAAGTTACATGGATGCAACAACCAAGTTaGATCTCAGCTTTCCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: NWFIAHSHLNQNGGEVTWMQQPS*ISAFLW Trigger: CCACAGGAAAGCTGAGATCAAACTTGGTTGTTGCAT...CCATGTAACTTCACCACCATTTTGATTAAGGTGACTATGTGCTATAAACCAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CCA 72 bp | CTCAGCGATTTGTTAGAGTGTTATCCATGTTCAGAATaGGGAAAGACAACCACTATTTCAGGAATTCTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LSDLLECYPCSE*GKTTTISGILN Trigger: ATTGAGAATTCCTGAAATAGTGGTTGTCTTTCCCCATTCTGAACATGGATAACACTCTAACAAATCGCTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR GCA 72 bp | CAATTAAGACATAGCAGGTCCATATATTCACATACCTaGCTTGAAGTCCATGAGGATAAAATCTACTATAGG | + |
|
Preference number: 3 (lower is better) Translates to: QLRHSRSIYSHT*LEVHEDKIYYR Trigger: CCTATAGTAGATTTTATCCTCATGGACTTCAAGGCAGGTATGTGAATATATGGACCTGCTATGTCTTAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTAAGTACAACCATGTTTATATGCAATCACAGCTTTTAGCAAATGGCAGGTTTAAACATGAAAGAGAGTaGGGATATAATCCCCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: PKYNHVYMQSQLLANGRFKHERE*GYNPLK Trigger: TTTGAGGGGATTATATCCCAACTCTCTTTCATGTTT...AAACCTGCCATTTGCTAAAAGCTGTGATTGCATATAAACATGGTTGTACTTAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTGGTTTATAGCACATAGTCACCTTAATCAAAATGGTGGTGAAGTTACATGGGCAGTGGTTCACATTTaGACCATGATTGTGATAAAC | + |
|
Preference number: 3 (lower is better) Translates to: NWFIAHSHLNQNGGEVTWAVVHI*TMIVIN Trigger: GTTTATCACAATCATGGTCAAAATGTGAACCACTGC...CCATGTAACTTCACCACCATTTTGATTAAGGTGACTATGTGCTATAAACCAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR-3UTR CAA 90 bp | ATATACACACACGTGTCATTGCCTAAGTACAACCATGTTTATATGCAATCACAGGGTTTCATGATTGTCTaGAGCAAGCAAGATTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: IYTHVSLPKYNHVYMQSQGFMIV*SKQDLF Trigger: AAACAAATCTTGCTTGCTCAAGACAATCATGAAACC...CTGTGATTGCATATAAACATGGTTGTACTTAGGCAATGACACGTGTGTGTATAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR GCA 72 bp | AACAATAAGCAACATAACAAGCAATCCATTCAACACTaGAACAAGTTTGTGAGCACACCAGAAAATACATGT | + |
|
Preference number: 3 (lower is better) Translates to: NNKQHNKQSIQH*NKFVSTPENTC Trigger: ACATGTATTTTCTGGTGTGCTCACAAACTTGTTGCAGTGTTGAATGGATTGCTTGTTATGTTGCTTATTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| CDS-3UTR TCA 90 bp | GTACAGGCGAATGCCAGGGCCAAGAACTGGGAGTGGGTGGGTGGGCAAGTGGGTGGCCTTCACAGAAGGTaGGTCTCAGCATGCAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: VQANARAKNWEWVGGQVGGLHRR*VSACKQ Trigger: TTGTTTGCATGCTGAGACTCACCTTCTGTGAAGGCC...ACCCACTTGCCCACCCACCCACTCCCAGTTCTTGGCCCTGGCATTCGCCTGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTCAAGTATGGGTCTCCCAGTTTCTCAGTTTCCATGGCTGGAGCCCTCAGGCCTGATGGGACATGGTaGCCTGGTAAAGCAGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLKYGSPSFSVSMAGALRPDGTW*PGKAGA Trigger: AGCCCCTGCTTTACCAGGTCACCATGTCCCATCAGG...CCTGAGGGCTCCAGCCATGGAAACTGAGAAACTGGGAGACCCATACTTGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| CDS-3UTR TCA 90 bp | GTACAGGCGAATGCCAGGGCCAAGAACTGGGAGTGGGTGGGTGGGCAAGTGGGTTTTCTCAGTGCAATGTaGACATCCTTATTCCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: VQANARAKNWEWVGGQVGFLSAM*TSLFLM Trigger: CATAAGGAATAAGGATGTTCACATTGCACTGAGAAA...ACCCACTTGCCCACCCACCCACTCCCAGTTCTTGGCCCTGGCATTCGCCTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| CDS-3UTR CCA 90 bp | CAATTAAGAGTAAGAAATGAATGTAGACATTCAGATCCCCACCACAAAAGAAGTCGGCAGCTGGAGCTCTaGCTCTTGTGTCAAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLRVRNECRHSDPHHKRSRQLEL*LLCQAQ Trigger: CTGGGCTTGACACAAGAGCCAGAGCTCCAGCTGCCG...ACTTCTTTTGTGGTGGGGATCTGAATGTCTACATTCATTTCTTACTCTTAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CAA 72 bp | AAGTGGTCCTTAAGATGTAGCCCTGTGGTAGGACACTaGCCAAACATGAAAGAGAGTTGGGATATAATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KWSLRCSPVVGH*PNMKESWDIIP Trigger: GGGGATTATATCCCAACTCTCTTTCATGTTTGGCAAGTGTCCTACCACAGGGCTACATCTTAAGGACCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| CDS-3UTR TCA 90 bp | AAGCAAGATTTGTTTATAGAAGTAGAGGCAGTGGTTCACATTTTGACCATGATTATCAAGAGGCAGACCTaGTGGGACATGGTGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQDLFIEVEAVVHILTMIIKRQT*WDMVTW Trigger: CCAGGTCACCATGTCCCATCAGGTCTGCCTCTTGAT...AATCATGGTCAAAATGTGAACCACTGCCTCTACTTCTATAAACAAATCTTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| CDS-3UTR CCA 90 bp | AACTGCTTTATGACTATGAGAAAAGACCAAAGTGGAAAGGACGTTTCCCTCTTTGAAACAGCTATCACATaGGAGCCACAGGTACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NCFMTMRKDQSGKDVSLFETAIT*EPQVLK Trigger: CTTCAGTACCTGTGGCTCCCATGTGATAGCTGTTTC...AAAGAGGGAAACGTCCTTTCCACTTTGGTCTTTTCTCATAGTCATAAAGCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CAA 72 bp | CAGATATACATCGCGCAATCAGGAGGTTACATTCTTTaGATATACACACACGTGTCATTGCCTAAGTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: QIYIAQSGGYIL*IYTHVSLPKYN Trigger: GTTGTACTTAGGCAATGACACGTGTGTGTATATCAAAAGAATGTAACCTCCTGATTGCGCGATGTATATCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CAA 72 bp | ATGGCAGGTTTCATGATTGTCTTGAGCAAGCAAGATTaGTTTATAGAAGTAGAGGCAGTGGTTCACATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: MAGFMIVLSKQD*FIEVEAVVHIL Trigger: CAAAATGTGAACCACTGCCTCTACTTCTATAAACAAATCTTGCTTGCTCAAGACAATCATGAAACCTGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CAA 72 bp | AATGACAGGGAGCTTTGTCCAGACAGTACCTCTGACTaGAAAATTAACTCTGGTTCCAGGTTTTCTTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: NDRELCPDSTSD*KINSGSRFSLI Trigger: AATTAAAGAAAACCTGGAACCAGAGTTAATTTTCAAGTCAGAGGTACTGTCTGGACAAAGCTCCCTGTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CAA 72 bp | GGAGGTTACATTCTTTTGATATACACACACGTGTCATaGCCTAAGTACAACCATGTTTATATGCAATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GGYILLIYTHVS*PKYNHVYMQSQ Trigger: CTGTGATTGCATATAAACATGGTTGTACTTAGGCAATGACACGTGTGTGTATATCAAAAGAATGTAACCTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| 3UTR CAA 72 bp | CCATCTGTCTTTGGGTCTTTCAGGATGGAGGCAATTTaGTTTCATAGATCTCTTAATTACAGTAAGTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSVFGSFRMEAI*FHRSLNYSKLN Trigger: ATTTAACTTACTGTAATTAAGAGATCTATGAAACAAAATTGCCTCCATCCTGAAAGACCCAAAGACAGATGG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| CDS-3UTR CAA 90 bp | AATTGGTTTATAGCACATAGTCACCTTAATCAAAATGGTGGTGAAGTTACATGGCTGGAGCTCTGGCTCTaGTGTCAAGCCCAGCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: NWFIAHSHLNQNGGEVTWLELWL*CQAQQN Trigger: ATTCTGCTGGGCTTGACACAAGAGCCAGAGCTCCAG...CCATGTAACTTCACCACCATTTTGATTAAGGTGACTATGTGCTATAAACCAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| CDS-3UTR CAA 90 bp | CCTAAGTACAACCATGTTTATATGCAATCACAGCTTTTAGCAAATGGCAGGTTTATCTGTCATAGGCCATaGCTGTCAAAATGTAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: PKYNHVYMQSQLLANGRFICHRP*LSKCSI Trigger: AATGCTACATTTTGACAGCAATGGCCTATGACAGAT...AAACCTGCCATTTGCTAAAAGCTGTGATTGCATATAAACATGGTTGTACTTAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||
| CDS-3UTR CAA 90 bp | AATGGCAGGTTTCATGATTGTCTTGAGCAAGCAAGATTTGTTTATAGAAGTAGAGTAGGAACTATCACATaGACACCCACAACAATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: NGRFHDCLEQARFVYRSRVGTIT*TPTTMK Trigger: TTTCATTGTTGTGGGTGTCAATGTGATAGTTCCTAC...TCTACTTCTATAAACAAATCTTGCTTGCTCAAGACAATCATGAAACCTGCCATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217286.2 |
||