Pregenerated sensors for OLFR888 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095527Ensembl transcript IDs: ENSMUST00000075228.2, ENSMUST00000211851.3
Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR TCA 72 bp | CATTTCCCTTCATCCTTCATCTTTTGGAGAAACAAATaGCCCTTTCAAAATGAAATCTACAAATATTCCCAG | + |
Preference number: 3 (lower is better) Translates to: HFPSSFIFWRNK*PFQNEIYKYSQ Trigger: CTGGGAATATTTGTAGATTTCATTTTGAAAGGGTCATTTGTTTCTCCAAAAGATGAAGGATGAAGGGAAATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211851.3 |
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CDS CCA 72 bp | AGAAGGTCAGACTTAGCATGCTACCAGTATGTGCCATaGCACCCACAAGCCCCATCACATACACTCCCACCA | + |
Preference number: 6 (lower is better) Translates to: RRSDLACYQYVP*HPQAPSHTLPP Trigger: TGGTGGGAGTGTATGTGATGGGGCTTGTGGGTGCCATGGCACATACTGGTAGCATGCTAAGTCTGACCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075228.2 ENSMUST00000211851.3 |