Pregenerated sensors for OLFR887 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096167Ensembl transcript IDs: ENSMUST00000212502.4
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGTGTCTGTGTCTGTTTGTCATCCTGCTGACTCCTTGTCCACCTaGGAACCGGAACCCAGAATTCTCCTGTGGGTTGAGGGACTGACT | + |
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Preference number: 1 (lower is better) Translates to: LVSVSVCHPADSLST*EPEPRILLWVEGLT Trigger: AGTCAGTCCCTCAACCCACAGGAGAATTCTGGGTTCCGGTTCTCAGGTGGACAAGGAGTCAGCAGGATGACAAACAGACACAGACACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CCA 90 bp | CTGATGCTCACTTTAAGACATTACATTCAGATACAGCACTCTCTCTaGTGTCTGTGTCTGTTTGTCATCCTGCTGACTCCTTGTCCACCT | + |
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Preference number: 1 (lower is better) Translates to: LMLTLRHYIQIQHSL*CLCLFVILLTPCPP Trigger: AGGTGGACAAGGAGTCAGCAGGATGACAAACAGACACAGACACCAGAGAGAGTGCTGTATCTGAATGTAATGTCTTAAAGTGAGCATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CCA 90 bp | CTCAGTTTGATTTACAGATCTCTGTGTGTATGCTGGGTTGTCATCTaGTACTTCCTATGTGTATGCCTAGTCCTGCTCTATACCTGTTCC | + |
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Preference number: 1 (lower is better) Translates to: LSLIYRSLCVCWVVI*YFLCVCLVLLYTCS Trigger: GGAACAGGTATAGAGCAGGACTAGGCATACACATAGGAAGTACCAGATGACAACCCAGCATACACACAGAGATCTGTAAATCAAACTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CCA 90 bp | TGCATGCATATAATCTCAGTAATAAAGATGCCATACCCACTCCAGTaGAAATTGTGTGACAAGCCCAAAAGTTTGGATGCAGTCCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: CMHIISVIKMPYPLQ*KLCDKPKSLDAVLR Trigger: CCTCAGGACTGCATCCAAACTTTTGGGCTTGTCACACAATTTCCACTGGAGTGGGTATGGCATCTTTATTACTGAGATTATATGCATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CCA 90 bp | CTTCTAAGGTTTCTCAGTTTGATTTACAGATCTCTGTGTGTATGCTaGGTTGTCATCTGGTACTTCCTATGTGTATGCCTAGTCCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: LLRFLSLIYRSLCVC*VVIWYFLCVCLVLL Trigger: GAGCAGGACTAGGCATACACATAGGAAGTACCAGATGACAACCCAGCATACACACAGAGATCTGTAAATCAAACTGAGAAACCTTAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR TCA 90 bp | AATCTCAGTAATAAAGATGCCATACCCACTCCAGTGGAAATTGTGTaGCAAGCCCAAAAGTTTGGATGCAGTCCTGAGGCAAAAAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: NLSNKDAIPTPVEIV*QAQKFGCSPEAKSF Trigger: GAAACTTTTTGCCTCAGGACTGCATCCAAACTTTTGGGCTTGTCACACAATTTCCACTGGAGTGGGTATGGCATCTTTATTACTGAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR GCA 90 bp | TGCCTGACTTTAGAAAGGGCCACCTTTTATCTCAGTTGTAACCACTaGCTGGGTCCTGCCAGTCTTTATATATACATTTCTCTGTTTTGT | + |
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Preference number: 1 (lower is better) Translates to: CLTLERATFYLSCNH*LGPASLYIYISLFC Trigger: ACAAAACAGAGAAATGTATATATAAAGACTGGCAGGACCCAGGCAGTGGTTACAACTGAGATAAAAGGTGGCCCTTTCTAAAGTCAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATaGTCCTATTTCTCCAGTAAAAATTCTTTCAGGCTAGATGTACAT | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCVCVCVCVCE*SYFSSKNSFRLDVH Trigger: ATGTACATCTAGCCTGAAAGAATTTTTACTGGAGAAATAGGACCATTCACACACACACACACACACACACACACACACACACACACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CCA 90 bp | TTGTTCTTACCTTCATTTCTGGGTATTTCTGCAGTGGCAGGTATGTaGAATTGCCAGCATGCCATCATCAACATAGAAGCTGTAAAGCAT | + |
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Preference number: 1 (lower is better) Translates to: LFLPSFLGISAVAGM*NCQHAIINIEAVKH Trigger: ATGCTTTACAGCTTCTATGTTGATGATGGCATGCTGGCAATTCCACATACCTGCCACTGCAGAAATACCCAGAAATGAAGGTAAGAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR GCA 90 bp | TTTCTTCTAAGGTTTCTCAGTTTGATTTACAGATCTCTGTGTGTATaGTGGGTTGTCATCTGGTACTTCCTATGTGTATGCCTAGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: FLLRFLSLIYRSLCV*WVVIWYFLCVCLVL Trigger: CAGGACTAGGCATACACATAGGAAGTACCAGATGACAACCCAGCATACACACAGAGATCTGTAAATCAAACTGAGAAACCTTAGAAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR GCA 90 bp | CTACATATATATTCTATAAGCAATCCTATCTTTAGCCAAGTCACCTaGCACCTCCTCAGAAAAAGTCCCTCCTATCAGATAGTACAAGAA | + |
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Preference number: 1 (lower is better) Translates to: LHIYSISNPIFSQVT*HLLRKSPSYQIVQE Trigger: TTCTTGTACTATCTGATAGGAGGGACTTTTTCTGAGGAGGTGGCAGGTGACTTGGCTAAAGATAGGATTGCTTATAGAATATATATGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR-3UTR TCA 90 bp | AGCCTAGTACTGTTTCAGTCAGTCCACTGTCCTGGGAAAAGGGATACCAACGAAAATGAAAGCATAAAGTaGCAGGACCATGGGACCCCA | + |
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Preference number: 2 (lower is better) Translates to: SLVLFQSVHCPGKRDTNENESIK*QDHGTP Trigger: TGGGGTCCCATGGTCCTGTCACTTTATGCTTTCATT...TTCGTTGGTATCCCTTTTCCCAGGACAGTGGACTGACTGAAACAGTACTAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR-3UTR CCA 90 bp | AGCCTAGTACTGTTTCAGTCAGTCCACTGTCCTGGGAAAAGGGATACCAACGAAATACAGCACTCTCTCTaGTGTCTGTGTCTGTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: SLVLFQSVHCPGKRDTNEIQHSL*CLCLFV Trigger: GACAAACAGACACAGACACCAGAGAGAGTGCTGTAT...TTCGTTGGTATCCCTTTTCCCAGGACAGTGGACTGACTGAAACAGTACTAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CAA 90 bp | ATGCCATACCCACTCCAGTGGAAATTGTGTGACAAGCCCAAAAGTTaGGATGCAGTCCTGAGGCAAAAAGTTTCATGGAAACTAGACTCC | + |
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Preference number: 2 (lower is better) Translates to: MPYPLQWKLCDKPKS*DAVLRQKVSWKLDS Trigger: GGAGTCTAGTTTCCATGAAACTTTTTGCCTCAGGACTGCATCCAAACTTTTGGGCTTGTCACACAATTTCCACTGGAGTGGGTATGGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR-3UTR GCA 90 bp | AGCCTAGTACTGTTTCAGTCAGTCCACTGTCCTGGGAAAAGGGATACCAACGAATCAGGCATTGCAGTTTaGCAGATAGGAGCTAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: SLVLFQSVHCPGKRDTNESGIAV*QIGARN Trigger: ATTTCTAGCTCCTATCTGGCAAACTGCAATGCCTGA...TTCGTTGGTATCCCTTTTCCCAGGACAGTGGACTGACTGAAACAGTACTAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR-3UTR GCA 90 bp | AGCCTAGTACTGTTTCAGTCAGTCCACTGTCCTGGGAAAAGGGATACCAACGAAATTTCTGGGTATTTCTaGAGTGGCAGGTATGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: SLVLFQSVHCPGKRDTNEISGYF*SGRYVE Trigger: TTCCACATACCTGCCACTGCAGAAATACCCAGAAAT...TTCGTTGGTATCCCTTTTCCCAGGACAGTGGACTGACTGAAACAGTACTAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CAA 90 bp | CCTCAACTCATTGGTAGTGACAGTAAAACCAATAGCTATGATAGGTaGCTTCCACAGATAGTAGCAGTGGCAGCTATGTGGAATTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: PQLIGSDSKTNSYDR*LPQIVAVAAMWNCQ Trigger: CTGGCAATTCCACATAGCTGCCACTGCTACTATCTGTGGAAGCAACCTATCATAGCTATTGGTTTTACTGTCACTACCAATGAGTTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CAA 90 bp | CTTACCTTCATTTCTGGGTATTTCTGCAGTGGCAGGTATGTGGAATaGCCAGCATGCCATCATCAACATAGAAGCTGTAAAGCATGGAGT | + |
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Preference number: 2 (lower is better) Translates to: LTFISGYFCSGRYVE*PACHHQHRSCKAWS Trigger: ACTCCATGCTTTACAGCTTCTATGTTGATGATGGCATGCTGGCAATTCCACATACCTGCCACTGCAGAAATACCCAGAAATGAAGGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR-3UTR GCA 90 bp | AGCCTAGTACTGTTTCAGTCAGTCCACTGTCCTGGGAAAAGGGATACCAACGAAAAGCTTTCTGTTGTTTaGCCAATGTCACCAAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: SLVLFQSVHCPGKRDTNEKLSVV*PMSPRF Trigger: AAACCTTGGTGACATTGGGCAAACAACAGAAAGCTT...TTCGTTGGTATCCCTTTTCCCAGGACAGTGGACTGACTGAAACAGTACTAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR-3UTR CCA 90 bp | AGCCTAGTACTGTTTCAGTCAGTCCACTGTCCTGGGAAAAGGGATACCAACGAAAAAAGCTGTAAAGCATaGAGTAGCAGTGCATGCATA | + |
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Preference number: 2 (lower is better) Translates to: SLVLFQSVHCPGKRDTNEKSCKA*SSSACI Trigger: TATGCATGCACTGCTACTCCATGCTTTACAGCTTTT...TTCGTTGGTATCCCTTTTCCCAGGACAGTGGACTGACTGAAACAGTACTAGGCT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR-3UTR TCA 90 bp | AGCCTAGTACTGTTTCAGTCAGTCCACTGTCCTGGGAAAAGGGATACCAACGAAACTCCAAGTGTATATTaGTACAAATTCTCCCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: SLVLFQSVHCPGKRDTNETPSVY*YKFSLN Trigger: GTTGAGGGAGAATTTGTATCAATATACACTTGGAGT...TTCGTTGGTATCCCTTTTCCCAGGACAGTGGACTGACTGAAACAGTACTAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR-3UTR CCA 90 bp | AGCCTAGTACTGTTTCAGTCAGTCCACTGTCCTGGGAAAAGGGATACCAACGAATATTGTACTGGTAGATaGCTGCAAAACTGTGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: SLVLFQSVHCPGKRDTNEYCTGR*LQNCVC Trigger: ACAAACACAGTTTTGCAGCCATCTACCAGTACAATA...TTCGTTGGTATCCCTTTTCCCAGGACAGTGGACTGACTGAAACAGTACTAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CAA 90 bp | GCATCTTGTGCAGGAATCTCAGGCATAATCACTACCTTCTATGATTaGTTCTTACCTTCATTTCTGGGTATTTCTGCAGTGGCAGGTATG | + |
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Preference number: 2 (lower is better) Translates to: ASCAGISGIITTFYD*FLPSFLGISAVAGM Trigger: CATACCTGCCACTGCAGAAATACCCAGAAATGAAGGTAAGAACAAATCATAGAAGGTAGTGATTATGCCTGAGATTCCTGCACAAGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR-3UTR TCA 90 bp | CTCATCAAGAACTTTGCTGCCTCTAAATCTCTGCTAGGCTCCTCCCTCTACATACAGAAGCTCATTAACTaGATAAATGAACTGCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: LIKNFAASKSLLGSSLYIQKLIN*INELLS Trigger: TGACAGCAGTTCATTTATTCAGTTAATGAGCTTCTG...TATGTAGAGGGAGGAGCCTAGCAGAGATTTAGAGGCAGCAAAGTTCTTGATGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CAA 90 bp | CATATAATCTCAGTAATAAAGATGCCATACCCACTCCAGTGGAAATaGTGTGACAAGCCCAAAAGTTTGGATGCAGTCCTGAGGCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: HIISVIKMPYPLQWK*CDKPKSLDAVLRQK Trigger: TTTTTGCCTCAGGACTGCATCCAAACTTTTGGGCTTGTCACACAATTTCCACTGGAGTGGGTATGGCATCTTTATTACTGAGATTATATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR-3UTR TCA 90 bp | CATATATATTCTATAAGCAATCCTATCTTTAGCCAAGTCACCTGCCACCTCCTCGTTTCATTTTTAGTGTaGAAGCACAGGAATCACAAC | + |
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Preference number: 2 (lower is better) Translates to: HIYSISNPIFSQVTCHLLVSFLV*KHRNHN Trigger: GTTGTGATTCCTGTGCTTTCACACTAAAAATGAAAC...GAGGAGGTGGCAGGTGACTTGGCTAAAGATAGGATTGCTTATAGAATATATATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR-3UTR TCA 90 bp | ATGGCTGTCCAAAATCTAAGAGTGAAAGGACAAAGAGTCAAAACTTGTAGAATCCAAATGCTCTGTCAATaGGTTATTTCTCCAGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: MAVQNLRVKGQRVKTCRIQMLCQ*VISPVF Trigger: GAAGACTGGAGAAATAACTCATTGACAGAGCATTTG...GATTCTACAAGTTTTGACTCTTTGTCCTTTCACTCTTAGATTTTGGACAGCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR-3UTR GCA 90 bp | ATGGCTGTCCAAAATCTAAGAGTGAAAGGACAAAGAGTCAAAACTTGTAGAATCGTACTGGTAGATGGCTaGAAAACTGTGTTTGTTAAC | + |
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Preference number: 2 (lower is better) Translates to: MAVQNLRVKGQRVKTCRIVLVDG*KTVFVN Trigger: GTTAACAAACACAGTTTTGCAGCCATCTACCAGTAC...GATTCTACAAGTTTTGACTCTTTGTCCTTTCACTCTTAGATTTTGGACAGCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR-3UTR CCA 90 bp | ATGGCTGTCCAAAATCTAAGAGTGAAAGGACAAAGAGTCAAAACTTGTAGAATCAAACCTTTCACCCTTTaGAGAAAGAAAAGAGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: MAVQNLRVKGQRVKTCRIKPFTL*RKKRAS Trigger: GGAAGCTCTTTTCTTTCTCCAAAGGGTGAAAGGTTT...GATTCTACAAGTTTTGACTCTTTGTCCTTTCACTCTTAGATTTTGGACAGCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR-3UTR TCA 90 bp | ATGGCTGTCCAAAATCTAAGAGTGAAAGGACAAAGAGTCAAAACTTGTAGAATCATTTCCAGAGCTAAATaGAAGCATAAAGTGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: MAVQNLRVKGQRVKTCRIISRAK*KHKVTG Trigger: TCCTGTCACTTTATGCTTTCATTTAGCTCTGGAAAT...GATTCTACAAGTTTTGACTCTTTGTCCTTTCACTCTTAGATTTTGGACAGCCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR TCA 72 bp | GTGTCTGTTTGTCATCCTGCTGACTCCTTGTCCACCTaGGAACCGGAACCCAGAATTCTCCTGTGGGTTGAG | + |
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Preference number: 3 (lower is better) Translates to: VSVCHPADSLST*EPEPRILLWVE Trigger: CTCAACCCACAGGAGAATTCTGGGTTCCGGTTCTCAGGTGGACAAGGAGTCAGCAGGATGACAAACAGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR TCA 72 bp | AACCGGAACCCAGAATTCTCCTGTGGGTTGAGGGACTaGCTGAGTCCAGTCCATGGCATCAAGATACAAAGT | + |
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Preference number: 3 (lower is better) Translates to: NRNPEFSCGLRD*LSPVHGIKIQS Trigger: ACTTTGTATCTTGATGCCATGGACTGGACTCAGTCAGTCCCTCAACCCACAGGAGAATTCTGGGTTCCGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR-3UTR CAA 90 bp | AGCCTAGTACTGTTTCAGTCAGTCCACTGTCCTGGGAAAAGGGATACCAACGAAGGCAGGTATGTGGAATaGCCAGCATGCCATCATCAA | + |
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Preference number: 3 (lower is better) Translates to: SLVLFQSVHCPGKRDTNEGRYVE*PACHHQ Trigger: TTGATGATGGCATGCTGGCAATTCCACATACCTGCC...TTCGTTGGTATCCCTTTTCCCAGGACAGTGGACTGACTGAAACAGTACTAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR-3UTR CAA 90 bp | AGCCTAGTACTGTTTCAGTCAGTCCACTGTCCTGGGAAAAGGGATACCAACGAAGAAACGCCTCCAGTGTaGATAGTAAGAAATCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: SLVLFQSVHCPGKRDTNEETPPV*IVRNQA Trigger: TGCCTGATTTCTTACTATCAACACTGGAGGCGTTTC...TTCGTTGGTATCCCTTTTCCCAGGACAGTGGACTGACTGAAACAGTACTAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CCA 72 bp | GCAAAAAGTTTCATGGAAACTAGACTCCTGGAGCCTTaGCATCCCATAGCACGAATGCTCCAAACTTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: AKSFMETRLLEP*HPIARMLQTCP Trigger: AGGACAAGTTTGGAGCATTCGTGCTATGGGATGCCAAGGCTCCAGGAGTCTAGTTTCCATGAAACTTTTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR-3UTR CAA 90 bp | AGCCTAGTACTGTTTCAGTCAGTCCACTGTCCTGGGAAAAGGGATACCAACGAATTCTCCCTCAACTCATaGGTAGTGACAGTAAAACCA | + |
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Preference number: 3 (lower is better) Translates to: SLVLFQSVHCPGKRDTNEFSLNS*VVTVKP Trigger: TGGTTTTACTGTCACTACCAATGAGTTGAGGGAGAA...TTCGTTGGTATCCCTTTTCCCAGGACAGTGGACTGACTGAAACAGTACTAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR-3UTR CAA 90 bp | AGCCTAGTACTGTTTCAGTCAGTCCACTGTCCTGGGAAAAGGGATACCAACGAAGATATACATAGCATCTaGTGCAGGAATCTCAGGCAT | + |
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Preference number: 3 (lower is better) Translates to: SLVLFQSVHCPGKRDTNEDIHSI*CRNLRH Trigger: ATGCCTGAGATTCCTGCACAAGATGCTATGTATATC...TTCGTTGGTATCCCTTTTCCCAGGACAGTGGACTGACTGAAACAGTACTAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR TCA 72 bp | AATAAAGATGCCATACCCACTCCAGTGGAAATTGTGTaGCAAGCCCAAAAGTTTGGATGCAGTCCTGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: NKDAIPTPVEIV*QAQKFGCSPEA Trigger: TGCCTCAGGACTGCATCCAAACTTTTGGGCTTGTCACACAATTTCCACTGGAGTGGGTATGGCATCTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR TCA 72 bp | TACCCACTCCAGTGGAAATGCTTTCCATTAAATGTGTaGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: YPLQWKCFPLNV*VCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACACTCACACATTTAATGGAAAGCATTTCCACTGGAGTGGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR GCA 72 bp | GTATGCTGGGTTGTCATCTGGTACTTCCTATGTGTATaGCTAGTCCTGCTCTATACCTGTTCCCATTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: VCWVVIWYFLCV*LVLLYTCSHSL Trigger: AAGAGAATGGGAACAGGTATAGAGCAGGACTAGGCATACACATAGGAAGTACCAGATGACAACCCAGCATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CCA 72 bp | AGGTTGCTTCCACAGATAGTAGCAGTGGCAGCTATGTaGAATTGCCAGCATGCCATCATCAACATAAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: RLLPQIVAVAAM*NCQHAIINIKA Trigger: AGCTTTTATGTTGATGATGGCATGCTGGCAATTCCACATAGCTGCCACTGCTACTATCTGTGGAAGCAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CCA 72 bp | CCTTCATTTCTGGGTATTTCTGCAGTGGCAGGTATGTaGAATTGCCAGCATGCCATCATCAACATAGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: PSFLGISAVAGM*NCQHAIINIEA Trigger: AGCTTCTATGTTGATGATGGCATGCTGGCAATTCCACATACCTGCCACTGCAGAAATACCCAGAAATGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR GCA 72 bp | GATAGTAGCAGTGGCAGCTATGTGGAATTGCCAGCATaGCATCATCAACATAAAAGCTGTAAAGCATGGAGT | + |
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Preference number: 3 (lower is better) Translates to: DSSSGSYVELPA*HHQHKSCKAWS Trigger: ACTCCATGCTTTACAGCTTTTATGTTGATGATGGCATGCTGGCAATTCCACATAGCTGCCACTGCTACTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR GCA 72 bp | CTTCCACAGATAGTAGCAGTGGCAGCTATGTGGAATTaGCAGCATGCCATCATCAACATAAAAGCTGTAAAG | + |
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Preference number: 3 (lower is better) Translates to: LPQIVAVAAMWN*QHAIINIKAVK Trigger: CTTTACAGCTTTTATGTTGATGATGGCATGCTGGCAATTCCACATAGCTGCCACTGCTACTATCTGTGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR GCA 72 bp | TATTTCTGCAGTGGCAGGTATGTGGAATTGCCAGCATaGCATCATCAACATAGAAGCTGTAAAGCATGGAGT | + |
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Preference number: 3 (lower is better) Translates to: YFCSGRYVELPA*HHQHRSCKAWS Trigger: ACTCCATGCTTTACAGCTTCTATGTTGATGATGGCATGCTGGCAATTCCACATACCTGCCACTGCAGAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR GCA 72 bp | TTTCTGGGTATTTCTGCAGTGGCAGGTATGTGGAATTaGCAGCATGCCATCATCAACATAGAAGCTGTAAAG | + |
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Preference number: 3 (lower is better) Translates to: FLGISAVAGMWN*QHAIINIEAVK Trigger: CTTTACAGCTTCTATGTTGATGATGGCATGCTGGCAATTCCACATACCTGCCACTGCAGAAATACCCAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR GCA 72 bp | AGACTGGATGGCTTAAACAACAGTAGTTCAGTTTCTTaGAGTCAGGGCTCCAGAAGTCCATTGCCAAATCTA | + |
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Preference number: 3 (lower is better) Translates to: RLDGLNNSSSVS*SQGSRSPLPNL Trigger: TAGATTTGGCAATGGACTTCTGGAGCCCTGACTGCAAGAAACTGAACTACTGTTGTTTAAGCCATCCAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CCA 72 bp | ACTTTAAGACATTACATTCAGATACAGCACTCTCTCTaGTGTCTGTGTCTGTTTGTCATCCTGCTGACTCCT | + |
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Preference number: 3 (lower is better) Translates to: TLRHYIQIQHSL*CLCLFVILLTP Trigger: AGGAGTCAGCAGGATGACAAACAGACACAGACACCAGAGAGAGTGCTGTATCTGAATGTAATGTCTTAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CCA 72 bp | ATTTGTTCTTACCTTCATTTCTGGGTATTTCTGCAGTaGCAGGTATGTGGAATTGCCAGCATGCCATCATCA | + |
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Preference number: 3 (lower is better) Translates to: ICSYLHFWVFLQ*QVCGIASMPSS Trigger: TGATGATGGCATGCTGGCAATTCCACATACCTGCCACTGCAGAAATACCCAGAAATGAAGGTAAGAACAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CCA 72 bp | ATTTACAGATCTCTGTGTGTATGCTGGGTTGTCATCTaGTACTTCCTATGTGTATGCCTAGTCCTGCTCTAT | + |
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Preference number: 3 (lower is better) Translates to: IYRSLCVCWVVI*YFLCVCLVLLY Trigger: ATAGAGCAGGACTAGGCATACACATAGGAAGTACCAGATGACAACCCAGCATACACACAGAGATCTGTAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR GCA 72 bp | TATTCTATAAGCAATCCTATCTTTAGCCAAGTCACCTaGCACCTCCTCAGAAAAAGTCCCTCCTATCAGATA | + |
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Preference number: 3 (lower is better) Translates to: YSISNPIFSQVT*HLLRKSPSYQI Trigger: TATCTGATAGGAGGGACTTTTTCTGAGGAGGTGGCAGGTGACTTGGCTAAAGATAGGATTGCTTATAGAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR GCA 72 bp | TCCAGTGTTGATAGTAAGAAATCAGGCATTGCAGTTTaGCAGATAGGAGCTAGAAATCTCAGGACTAGTTCA | + |
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Preference number: 3 (lower is better) Translates to: SSVDSKKSGIAV*QIGARNLRTSS Trigger: TGAACTAGTCCTGAGATTTCTAGCTCCTATCTGGCAAACTGCAATGCCTGATTTCTTACTATCAACACTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR GCA 72 bp | AGGTTTCTCAGTTTGATTTACAGATCTCTGTGTGTATaGTGGGTTGTCATCTGGTACTTCCTATGTGTATGC | + |
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Preference number: 3 (lower is better) Translates to: RFLSLIYRSLCV*WVVIWYFLCVC Trigger: GCATACACATAGGAAGTACCAGATGACAACCCAGCATACACACAGAGATCTGTAAATCAAACTGAGAAACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CCA 72 bp | ATAATCTCAGTAATAAAGATGCCATACCCACTCCAGTaGAAATTGTGTGACAAGCCCAAAAGTTTGGATGCA | + |
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Preference number: 3 (lower is better) Translates to: IISVIKMPYPLQ*KLCDKPKSLDA Trigger: TGCATCCAAACTTTTGGGCTTGTCACACAATTTCCACTGGAGTGGGTATGGCATCTTTATTACTGAGATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CCA 72 bp | TTTCTCAGTTTGATTTACAGATCTCTGTGTGTATGCTaGGTTGTCATCTGGTACTTCCTATGTGTATGCCTA | + |
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Preference number: 3 (lower is better) Translates to: FLSLIYRSLCVC*VVIWYFLCVCL Trigger: TAGGCATACACATAGGAAGTACCAGATGACAACCCAGCATACACACAGAGATCTGTAAATCAAACTGAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| CDS-3UTR TCA 90 bp | AGCCTAGTACTGTTTCAGTCAGTCCACTGTCCTGGGAAAAGGGATACCAACGAACCTGATGAGACATGGTaGCCTGGTAAAGCAGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SLVLFQSVHCPGKRDTNEPDETW*PGKAGA Trigger: AGCCCCTGCTTTACCAGGTCACCATGTCTCATCAGG...TTCGTTGGTATCCCTTTTCCCAGGACAGTGGACTGACTGAAACAGTACTAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| CDS-3UTR TCA 90 bp | AGCCTAGTACTGTTTCAGTCAGTCCACTGTCCTGGGAAAAGGGATACCAACGAACCACACCCATCATCATaGAGTGGCAGACCTGATGAG | + |
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Preference number: 4 (lower is better) Translates to: SLVLFQSVHCPGKRDTNEPHPSS*SGRPDE Trigger: CTCATCAGGTCTGCCACTTCATGATGATGGGTGTGG...TTCGTTGGTATCCCTTTTCCCAGGACAGTGGACTGACTGAAACAGTACTAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| CDS-3UTR TCA 90 bp | CTCATCAAGAACTTTGCTGCCTCTAAATCTCTGCTAGGCTCCTCCCTCTACATAATGGGCGTGTGCAGGTaGGGATTCAAAACAATCAGA | + |
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Preference number: 4 (lower is better) Translates to: LIKNFAASKSLLGSSLYIMGVCR*GFKTIR Trigger: TCTGATTGTTTTGAATCCTCACCTGCACACGCCCAT...TATGTAGAGGGAGGAGCCTAGCAGAGATTTAGAGGCAGCAAAGTTCTTGATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| CDS-3UTR TCA 90 bp | AGCCTAGTACTGTTTCAGTCAGTCCACTGTCCTGGGAAAAGGGATACCAACGAAACTCTGCATGGGAGATaGTGTTCTGTGTCACAAAAC | + |
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Preference number: 4 (lower is better) Translates to: SLVLFQSVHCPGKRDTNETLHGR*CSVSQN Trigger: GTTTTGTGACACAGAACATCATCTCCCATGCAGAGT...TTCGTTGGTATCCCTTTTCCCAGGACAGTGGACTGACTGAAACAGTACTAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| CDS-3UTR TCA 90 bp | CTCATCAAGAACTTTGCTGCCTCTAAATCTCTGCTAGGCTCCTCCCTCTACATAGCAAAGAAAAAGAGCTaGGTCATGCACTCTGCATGG | + |
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Preference number: 4 (lower is better) Translates to: LIKNFAASKSLLGSSLYIAKKKS*VMHSAW Trigger: CCATGCAGAGTGCATGACTCAGCTCTTTTTCTTTGC...TATGTAGAGGGAGGAGCCTAGCAGAGATTTAGAGGCAGCAAAGTTCTTGATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| CDS-3UTR TCA 90 bp | CATATATATTCTATAAGCAATCCTATCTTTAGCCAAGTCACCTGCCACCTCCTCGTCTCAGCATGCAAATaGTGTGTGCCACAGCACCCA | + |
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Preference number: 4 (lower is better) Translates to: HIYSISNPIFSQVTCHLLVSACK*CVPQHP Trigger: TGGGTGCTGTGGCACACATCATTTGCATGCTGAGAC...GAGGAGGTGGCAGGTGACTTGGCTAAAGATAGGATTGCTTATAGAATATATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CAA 72 bp | CTGCTTAGAATTTCTGCTTTAAGAGGCCCATTGGACTaGCAAACTTTATATGCCCCAGTACAGGGGAACACC | + |
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Preference number: 4 (lower is better) Translates to: LLRISALRGPLD*QTLYAPVQGNT Trigger: GGTGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTTAAAGCAGAAATTCTAAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CAA 72 bp | CACCTACTGCTTAGAATTTCTGCTTTAAGAGGCCCATaGGACTTGCAAACTTTATATGCCCCAGTACAGGGG | + |
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Preference number: 4 (lower is better) Translates to: HLLLRISALRGP*DLQTLYAPVQG Trigger: CCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTTAAAGCAGAAATTCTAAGCAGTAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CAA 72 bp | CCACTCCAGTGGAAATTGTGTGACAAGCCCAAAAGTTaGGATGCAGTCCTGAGGCAAAAAGTTTCATGGAAA | + |
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Preference number: 4 (lower is better) Translates to: PLQWKLCDKPKS*DAVLRQKVSWK Trigger: TTTCCATGAAACTTTTTGCCTCAGGACTGCATCCAAACTTTTGGGCTTGTCACACAATTTCCACTGGAGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CAA 72 bp | TCAGTAATAAAGATGCCATACCCACTCCAGTGGAAATaGTGTGACAAGCCCAAAAGTTTGGATGCAGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SVIKMPYPLQWK*CDKPKSLDAVL Trigger: CAGGACTGCATCCAAACTTTTGGGCTTGTCACACAATTTCCACTGGAGTGGGTATGGCATCTTTATTACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CAA 72 bp | GCTTCCACAGATAGTAGCAGTGGCAGCTATGTGGAATaGCCAGCATGCCATCATCAACATAAAAGCTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: ASTDSSSGSYVE*PACHHQHKSCK Trigger: TTTACAGCTTTTATGTTGATGATGGCATGCTGGCAATTCCACATAGCTGCCACTGCTACTATCTGTGGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CAA 72 bp | ATTTCTGGGTATTTCTGCAGTGGCAGGTATGTGGAATaGCCAGCATGCCATCATCAACATAGAAGCTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: ISGYFCSGRYVE*PACHHQHRSCK Trigger: TTTACAGCTTCTATGTTGATGATGGCATGCTGGCAATTCCACATACCTGCCACTGCAGAAATACCCAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| CDS-3UTR CCA 90 bp | CTCATCAAGAACTTTGCTGCCTCTAAATCTCTGCTAGGCTCCTCCCTCTACATACTACCCTCTGCAGAATaGATACTAAGAATATTGGAA | + |
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Preference number: 4 (lower is better) Translates to: LIKNFAASKSLLGSSLYILPSAE*ILRILE Trigger: TTCCAATATTCTTAGTATCCATTCTGCAGAGGGTAG...TATGTAGAGGGAGGAGCCTAGCAGAGATTTAGAGGCAGCAAAGTTCTTGATGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CAA 72 bp | AGTTCAGTTTCTTGCAGTCAGGGCTCCAGAAGTCCATaGCCAAATCTATTTCTTCTAAGGTTTCTCAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: SSVSCSQGSRSP*PNLFLLRFLSL Trigger: CAAACTGAGAAACCTTAGAAGAAATAGATTTGGCAATGGACTTCTGGAGCCCTGACTGCAAGAAACTGAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| CDS-3UTR CCA 90 bp | CTCATCAAGAACTTTGCTGCCTCTAAATCTCTGCTAGGCTCCTCCCTCTACATAGAAAGGATTCAACATTaGGCCTACAATGGTATAAAA | + |
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Preference number: 4 (lower is better) Translates to: LIKNFAASKSLLGSSLYIERIQH*AYNGIK Trigger: TTTTATACCATTGTAGGCCCAATGTTGAATCCTTTC...TATGTAGAGGGAGGAGCCTAGCAGAGATTTAGAGGCAGCAAAGTTCTTGATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CAA 72 bp | AAGAATGTTACTCATTCAGATGAAACGCCTCCAGTGTaGATAGTAAGAAATCAGGCATTGCAGTTTGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: KNVTHSDETPPV*IVRNQALQFAR Trigger: TCTGGCAAACTGCAATGCCTGATTTCTTACTATCAACACTGGAGGCGTTTCATCTGAATGAGTAACATTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CAA 72 bp | GTCCTCAGAAATAAGGCTTTAGATATACATAGCATCTaGTGCAGGAATCTCAGGCATAATCACTACCTTCTA | + |
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Preference number: 4 (lower is better) Translates to: VLRNKALDIHSI*CRNLRHNHYLL Trigger: TAGAAGGTAGTGATTATGCCTGAGATTCCTGCACAAGATGCTATGTATATCTAAAGCCTTATTTCTGAGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| CDS-3UTR CCA 90 bp | ATGGCTGTCCAAAATCTAAGAGTGAAAGGACAAAGAGTCAAAACTTGTAGAATCTTTCGCATTGCAATGTaGACATCCTTATTCCTTAAA | + |
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Preference number: 4 (lower is better) Translates to: MAVQNLRVKGQRVKTCRIFRIAM*TSLFLK Trigger: TTTAAGGAATAAGGATGTCCACATTGCAATGCGAAA...GATTCTACAAGTTTTGACTCTTTGTCCTTTCACTCTTAGATTTTGGACAGCCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| 3UTR CAA 72 bp | ATTCCTACTCCTGTTTCAGTGGACACTGAGCAAATATaGACTAATATCTCATTAGACAAAAATCACCATCCT | + |
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Preference number: 4 (lower is better) Translates to: IPTPVSVDTEQI*TNISLDKNHHP Trigger: AGGATGGTGATTTTTGTCTAATGAGATATTAGTCAATATTTGCTCAGTGTCCACTGAAACAGGAGTAGGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| CDS-3UTR CAA 90 bp | CTCATCAAGAACTTTGCTGCCTCTAAATCTCTGCTAGGCTCCTCCCTCTACATAAAACTCACTAACATTTaGGGGGTTATGACAGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LIKNFAASKSLLGSSLYIKLTNI*GVMTEE Trigger: CTCCTCTGTCATAACCCCCAAAATGTTAGTGAGTTT...TATGTAGAGGGAGGAGCCTAGCAGAGATTTAGAGGCAGCAAAGTTCTTGATGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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| CDS-3UTR CAA 90 bp | AGCCTAGTACTGTTTCAGTCAGTCCACTGTCCTGGGAAAAGGGATACCAACGAATCAAAGTTTTTCGCATaGCAATGTGGACATCCTTAT | + |
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Preference number: 5 (lower is better) Translates to: SLVLFQSVHCPGKRDTNESKFFA*QCGHPY Trigger: ATAAGGATGTCCACATTGCAATGCGAAAAACTTTGA...TTCGTTGGTATCCCTTTTCCCAGGACAGTGGACTGACTGAAACAGTACTAGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212502.4 |
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