Pregenerated sensors for OLFR881 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060583Ensembl transcript IDs: ENSMUST00000074611.3, ENSMUST00000212489.3
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATATCTCAGCTGATCAAACCTCAGGCTTTCCTGCACCCCTACAACTaGGGTCAGCTCTCCTGGAATCACAATTCATCAATTCCTCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: ISQLIKPQAFLHPYN*GQLSWNHNSSIPLY Trigger: GTAAAGAGGAATTGATGAATTGTGATTCCAGGAGAGCTGACCCCAGTTGTAGGGGTGCAGGAAAGCCTGAGGTTTGATCAGCTGAGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR TCA 90 bp | TTTCCGCAAGTATATCATCAAGTATGGCTTCTGTGTCGGGTCTTCTaGGGTTTCCTCTTTCTTTGGATTACAGACGTCTGTGCTTTTGCT | + |
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Preference number: 1 (lower is better) Translates to: FPQVYHQVWLLCRVF*GFLFLWITDVCAFA Trigger: AGCAAAAGCACAGACGTCTGTAATCCAAAGAAAGAGGAAACCTCAGAAGACCCGACACAGAAGCCATACTTGATGATATACTTGCGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR CCA 90 bp | TCACATTATTTAGAGCCTAGTACTGTTGCAGCCAGTCCACTGTTCTaGGGAATAGGACACCAACAAAAGCTTCTTCATGATAATCACTCA | + |
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Preference number: 1 (lower is better) Translates to: SHYLEPSTVAASPLF*GIGHQQKLLHDNHS Trigger: TGAGTGATTATCATGAAGAAGCTTTTGTTGGTGTCCTATTCCCCAGAACAGTGGACTGGCTGCAACAGTACTAGGCTCTAAATAATGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR GCA 90 bp | GGTGTGATTATTCATTCCAATAATGCTAACAAATCTGGATGCTGTTaGATTCAAGACCTACCTGGATACCAGGTAGGGCTAGAGGTATTA | + |
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Preference number: 1 (lower is better) Translates to: GVIIHSNNANKSGCC*IQDLPGYQVGLEVL Trigger: TAATACCTCTAGCCCTACCTGGTATCCAGGTAGGTCTTGAATGCAACAGCATCCAGATTTGTTAGCATTATTGGAATGAATAATCACACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR CCA 90 bp | TCGCAAACTGGATGTATATTTATGGATATTGGTGCTTGTCTGGCATaGGAAGGTACTACATCCATTCCCTATAGAACAAAAACAGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: SQTGCIFMDIGACLA*EGTTSIPYRTKTGA Trigger: AGCACCTGTTTTTGTTCTATAGGGAATGGATGTAGTACCTTCCCATGCCAGACAAGCACCAATATCCATAAATATACATCCAGTTTGCGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR TCA 90 bp | TCCTCTTTACCAAACTGGCTTAAGCCTATAGAGAAAAGACTAGAGTaGAAAGGGCATTTCCCATCCTTACTTCAGTCTTTGAAGAAACTG | + |
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Preference number: 1 (lower is better) Translates to: SSLPNWLKPIEKRLE*KGHFPSLLQSLKKL Trigger: CAGTTTCTTCAAAGACTGAAGTAAGGATGGGAAATGCCCTTTTCACTCTAGTCTTTTCTCTATAGGCTTAAGCCAGTTTGGTAAAGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR CCA 90 bp | AATCCTCGCAAACTGGATGTATATTTATGGATATTGGTGCTTGTCTaGCATGGGAAGGTACTACATCCATTCCCTATAGAACAAAAACAG | + |
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Preference number: 1 (lower is better) Translates to: NPRKLDVYLWILVLV*HGKVLHPFPIEQKQ Trigger: CTGTTTTTGTTCTATAGGGAATGGATGTAGTACCTTCCCATGCCAGACAAGCACCAATATCCATAAATATACATCCAGTTTGCGAGGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR-3UTR TCA 90 bp | CCCCTACAACTGGGGTCAGCTCTCCTGGAATCACAATTCATCAATTCCTCTTTAGCATGCAACAGAACCTaGGTCTCCAAAGTCACACTG | + |
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Preference number: 2 (lower is better) Translates to: PLQLGSALLESQFINSSLACNRT*VSKVTL Trigger: CAGTGTGACTTTGGAGACTCAGGTTCTGTTGCATGC...TAAAGAGGAATTGATGAATTGTGATTCCAGGAGAGCTGACCCCAGTTGTAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGGTTTCCTCTTTCTTTGGATTACAGACGTCTGTGCTTTTGCTGTTCTCACTGCACCCCTACAACTaGGGTCAGCTCTCCTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: SEVSSFFGLQTSVLLLFSLHPYN*GQLSWN Trigger: ATTCCAGGAGAGCTGACCCCAGTTGTAGGGGTGCAG...TGAGAACAGCAAAAGCACAGACGTCTGTAATCCAAAGAAAGAGGAAACCTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGGTTTCCTCTTTCTTTGGATTACAGACGTCTGTGCTTTTGCTGTTCTCACAAAGGCAGTTCTCTTaGAACTTCCAGCAGGTCATC | + |
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Preference number: 2 (lower is better) Translates to: SEVSSFFGLQTSVLLLFSQRQFS*NFQQVI Trigger: GATGACCTGCTGGAAGTTCCAAGAGAACTGCCTTTG...TGAGAACAGCAAAAGCACAGACGTCTGTAATCCAAAGAAAGAGGAAACCTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR-3UTR TCA 90 bp | TCTGAGGTTTCCTCTTTCTTTGGATTACAGACGTCTGTGCTTTTGCTGTTCTCACTCATTGAAGTAGCATaGAATCACCTGCTGCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: SEVSSFFGLQTSVLLLFSLIEVA*NHLLLR Trigger: TCTCAGCAGCAGGTGATTTCATGCTACTTCAATGAG...TGAGAACAGCAAAAGCACAGACGTCTGTAATCCAAAGAAAGAGGAAACCTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR-3UTR GCA 90 bp | CCCCTACAACTGGGGTCAGCTCTCCTGGAATCACAATTCATCAATTCCTCTTTAGTTGTATACCACACATaGTCTAAGATTTTCCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: PLQLGSALLESQFINSSLVVYHT*SKIFLS Trigger: TGAGAGGAAAATCTTAGAGCATGTGTGGTATACAAC...TAAAGAGGAATTGATGAATTGTGATTCCAGGAGAGCTGACCCCAGTTGTAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR-3UTR CCA 90 bp | TTGGATTACAGACGTCTGTGCTTTTGCTGTTCTCATCTGGCTCTTCCTATGTGTCTATTACCAGGCCTCTaGCTTCTGTTTTTCTATCAA | + |
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Preference number: 2 (lower is better) Translates to: LDYRRLCFCCSHLALPMCLLPGL*LLFFYQ Trigger: TTGATAGAAAAACAGAAGCCAGAGGCCTGGTAATAG...ACACATAGGAAGAGCCAGATGAGAACAGCAAAAGCACAGACGTCTGTAATCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR-3UTR CCA 90 bp | TTGGATTACAGACGTCTGTGCTTTTGCTGTTCTCATCTGGCTCTTCCTATGTGTCTGGATGTATATTTATaGATATTGGTGCTTGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: LDYRRLCFCCSHLALPMCLDVYL*ILVLVW Trigger: CCAGACAAGCACCAATATCCATAAATATACATCCAG...ACACATAGGAAGAGCCAGATGAGAACAGCAAAAGCACAGACGTCTGTAATCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR-3UTR TCA 90 bp | TCTGAGGTTTCCTCTTTCTTTGGATTACAGACGTCTGTGCTTTTGCTGTTCTCATTGCTATTGCTGATTTaGAAGGCTATGGTTCAAATC | + |
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Preference number: 2 (lower is better) Translates to: SEVSSFFGLQTSVLLLFSLLLLI*KAMVQI Trigger: GATTTGAACCATAGCCTTTCAAATCAGCAATAGCAA...TGAGAACAGCAAAAGCACAGACGTCTGTAATCCAAAGAAAGAGGAAACCTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR-3UTR TCA 90 bp | TCTGAGGTTTCCTCTTTCTTTGGATTACAGACGTCTGTGCTTTTGCTGTTCTCATTTGTTTGCTATTGCTaGTTTGAAAGGCTATGGTTC | + |
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Preference number: 2 (lower is better) Translates to: SEVSSFFGLQTSVLLLFSFVCYC*FERLWF Trigger: GAACCATAGCCTTTCAAATCAGCAATAGCAAACAAA...TGAGAACAGCAAAAGCACAGACGTCTGTAATCCAAAGAAAGAGGAAACCTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR-3UTR TCA 90 bp | GCTCTCCTGGAATCACAATTCATCAATTCCTCTTTACCAAACTGGCTTAAGCCTCCTTACTTCAGTCTTTaGAGAAACTGGAAACCTTTA | + |
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Preference number: 2 (lower is better) Translates to: ALLESQFINSSLPNWLKPPYFSL*RNWKPL Trigger: TAAAGGTTTCCAGTTTCTTCAAAGACTGAAGTAAGG...AGGCTTAAGCCAGTTTGGTAAAGAGGAATTGATGAATTGTGATTCCAGGAGAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGGTTTCCTCTTTCTTTGGATTACAGACGTCTGTGCTTTTGCTGTTCTCAAGCTTATATGACTTGTaGTTATCTTCATTCCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: SEVSSFFGLQTSVLLLFSSLYDL*LSSFPW Trigger: CCAAGGGAATGAAGATAACCACAAGTCATATAAGCT...TGAGAACAGCAAAAGCACAGACGTCTGTAATCCAAAGAAAGAGGAAACCTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGGTTTCCTCTTTCTTTGGATTACAGACGTCTGTGCTTTTGCTGTTCTCACTTGCAAACATACATTaGAGTAAGTCATTGGTCTAT | + |
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Preference number: 2 (lower is better) Translates to: SEVSSFFGLQTSVLLLFSLANIH*SKSLVY Trigger: ATAGACCAATGACTTACTGCAATGTATGTTTGCAAG...TGAGAACAGCAAAAGCACAGACGTCTGTAATCCAAAGAAAGAGGAAACCTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR CAA 90 bp | ATGCTAGTTTATAACTCAGTATGTGGTTTTAAGGAGGGGTTTGAATaGATCATCTTTCTGCTTCAGACTCTCATCTGTAGGATTACAGTG | + |
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Preference number: 2 (lower is better) Translates to: MLVYNSVCGFKEGFE*IIFLLQTLICRITV Trigger: CACTGTAATCCTACAGATGAGAGTCTGAAGCAGAAAGATGATCAATTCAAACCCCTCCTTAAAACCACATACTGAGTTATAAACTAGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR-3UTR CCA 90 bp | GATAGTGACAGCAATAGTTATGATCAGCTGCTAACACATATACTAGCAAAGGCAAAATCAGTATCTCAGTaGCACAGAGACATAAAACTT | + |
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Preference number: 2 (lower is better) Translates to: DSDSNSYDQLLTHILAKAKSVSQ*HRDIKL Trigger: AAGTTTTATGTCTCTGTGCCACTGAGATACTGATTT...TGCCTTTGCTAGTATATGTGTTAGCAGCTGATCATAACTATTGCTGTCACTATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR CAA 90 bp | TTTATACATACTTCTTTGCTTGCAAACATACATTGCAGTAAGTCATaGGTCTATTACCAGGCCTCTGGCTTCTGTTTTTCTATCAATACT | + |
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Preference number: 2 (lower is better) Translates to: FIHTSLLANIHCSKS*VYYQASGFCFSINT Trigger: AGTATTGATAGAAAAACAGAAGCCAGAGGCCTGGTAATAGACCAATGACTTACTGCAATGTATGTTTGCAAGCAAAGAAGTATGTATAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCTTCTGTTTTTCTATCAATACTTGAACCTCTTTGGGACTCCTTTTAGATATTCCTCTTTACCAAACTaGCTTAAGCCTATAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: WLLFFYQYLNLFGTPFRYSSLPN*LKPIEK Trigger: TTTCTCTATAGGCTTAAGCCAGTTTGGTAAAGAGGA...ATATCTAAAAGGAGTCCCAAAGAGGTTCAAGTATTGATAGAAAAACAGAAGCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR CCA 72 bp | CTGATCAAACCTCAGGCTTTCCTGCACCCCTACAACTaGGGTCAGCTCTCCTGGAATCACAATTCATCAATT | + |
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Preference number: 3 (lower is better) Translates to: LIKPQAFLHPYN*GQLSWNHNSSI Trigger: AATTGATGAATTGTGATTCCAGGAGAGCTGACCCCAGTTGTAGGGGTGCAGGAAAGCCTGAGGTTTGATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR CCA 72 bp | GCTTTCCTGCACCCCTACAACTGGGGTCAGCTCTCCTaGAATCACAATTCATCAATTCCTCTTTACCAAACT | + |
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Preference number: 3 (lower is better) Translates to: AFLHPYNWGQLS*NHNSSIPLYQT Trigger: AGTTTGGTAAAGAGGAATTGATGAATTGTGATTCCAGGAGAGCTGACCCCAGTTGTAGGGGTGCAGGAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR CCA 72 bp | TTAGAGCCTAGTACTGTTGCAGCCAGTCCACTGTTCTaGGGAATAGGACACCAACAAAAGCTTCTTCATGAT | + |
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Preference number: 3 (lower is better) Translates to: LEPSTVAASPLF*GIGHQQKLLHD Trigger: ATCATGAAGAAGCTTTTGTTGGTGTCCTATTCCCCAGAACAGTGGACTGGCTGCAACAGTACTAGGCTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR TCA 72 bp | GTATATCATCAAGTATGGCTTCTGTGTCGGGTCTTCTaGGGTTTCCTCTTTCTTTGGATTACAGACGTCTGT | + |
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Preference number: 3 (lower is better) Translates to: VYHQVWLLCRVF*GFLFLWITDVC Trigger: ACAGACGTCTGTAATCCAAAGAAAGAGGAAACCTCAGAAGACCCGACACAGAAGCCATACTTGATGATATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR-3UTR CAA 90 bp | ACAGACGTCTGTGCTTTTGCTGTTCTCATCTGGCTCTTCCTATGTGTATGTCCATCCTTACTTCAGTCTTaGAAGAAACTGGAAACCTTT | + |
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Preference number: 3 (lower is better) Translates to: TDVCAFAVLIWLFLCVCPSLLQS*KKLETF Trigger: AAAGGTTTCCAGTTTCTTCAAAGACTGAAGTAAGGA...TGGACATACACATAGGAAGAGCCAGATGAGAACAGCAAAAGCACAGACGTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR-3UTR CAA 90 bp | ACAGACGTCTGTGCTTTTGCTGTTCTCATCTGGCTCTTCCTATGTGTATGTCCATTTTTAAATATGCCCTaGGGATTTCTCTCCATATGC | + |
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Preference number: 3 (lower is better) Translates to: TDVCAFAVLIWLFLCVCPFLNMP*GFLSIC Trigger: GCATATGGAGAGAAATCCCAAGGGCATATTTAAAAA...TGGACATACACATAGGAAGAGCCAGATGAGAACAGCAAAAGCACAGACGTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR CCA 72 bp | CTCCAACAAAATCCTCGCAAACTGGATGTATATTTATaGATATTGGTGCTTGTCTGGCATGGGAAGGTACTA | + |
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Preference number: 3 (lower is better) Translates to: LQQNPRKLDVYL*ILVLVWHGKVL Trigger: TAGTACCTTCCCATGCCAGACAAGCACCAATATCCATAAATATACATCCAGTTTGCGAGGATTTTGTTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR TCA 72 bp | AGACAAAAGGAGGCTGTCAACCTCATTGAAGTAGCATaGAATCACCTGCTGCTGAGAATTTCTACTTTATTC | + |
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Preference number: 3 (lower is better) Translates to: RQKEAVNLIEVA*NHLLLRISTLF Trigger: GAATAAAGTAGAAATTCTCAGCAGCAGGTGATTTCATGCTACTTCAATGAGGTTGACAGCCTCCTTTTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR CCA 72 bp | CTTCTTTGCTTGCAAACATACATTGCAGTAAGTCATTaGTCTATTACCAGGCCTCTGGCTTCTGTTTTTCTA | + |
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Preference number: 3 (lower is better) Translates to: LLCLQTYIAVSH*SITRPLASVFL Trigger: TAGAAAAACAGAAGCCAGAGGCCTGGTAATAGACCAATGACTTACTGCAATGTATGTTTGCAAGCAAAGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR CCA 72 bp | AAAATCCTCGCAAACTGGATGTATATTTATGGATATTaGTGCTTGTCTGGCATGGGAAGGTACTACATCCAT | + |
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Preference number: 3 (lower is better) Translates to: KILANWMYIYGY*CLSGMGRYYIH Trigger: ATGGATGTAGTACCTTCCCATGCCAGACAAGCACCAATATCCATAAATATACATCCAGTTTGCGAGGATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR TCA 72 bp | ATAACTCAGTATGTGGTTTTAAGGAGGGGTTTGAATTaGTCATCTTTCTGCTTCAGACTCTCATCTGTAGGA | + |
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Preference number: 3 (lower is better) Translates to: ITQYVVLRRGLN*SSFCFRLSSVG Trigger: TCCTACAGATGAGAGTCTGAAGCAGAAAGATGATCAATTCAAACCCCTCCTTAAAACCACATACTGAGTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR GCA 72 bp | GTGATTATTCATTCCAATAATGCTAACAAATCTGGATaGTGTTGCATTCAAGACCTACCTGGATACCAGGTA | + |
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Preference number: 3 (lower is better) Translates to: VIIHSNNANKSG*CCIQDLPGYQV Trigger: TACCTGGTATCCAGGTAGGTCTTGAATGCAACAGCATCCAGATTTGTTAGCATTATTGGAATGAATAATCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR CCA 72 bp | AAACTGGATGTATATTTATGGATATTGGTGCTTGTCTaGCATGGGAAGGTACTACATCCATTCCCTATAGAA | + |
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Preference number: 3 (lower is better) Translates to: KLDVYLWILVLV*HGKVLHPFPIE Trigger: TTCTATAGGGAATGGATGTAGTACCTTCCCATGCCAGACAAGCACCAATATCCATAAATATACATCCAGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| CDS-3UTR TCA 90 bp | TTGGATTACAGACGTCTGTGCTTTTGCTGTTCTCATCTGGCTCTTCCTATGTGTCCCGATGGGACATGGTaGCCTGGTAAAGCAGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LDYRRLCFCCSHLALPMCPDGTW*PGKAGA Trigger: AGCCCCTGCTTTACCAGGTCACCATGTCCCATCGGG...ACACATAGGAAGAGCCAGATGAGAACAGCAAAAGCACAGACGTCTGTAATCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| CDS-3UTR CCA 90 bp | CCCCTACAACTGGGGTCAGCTCTCCTGGAATCACAATTCATCAATTCCTCTTTAAAGAAGAGAGGCAGTTaGAGCTCTGGCTGCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: PLQLGSALLESQFINSSLKKRGS*SSGCCV Trigger: GACACAGCAGCCAGAGCTCCAACTGCCTCTCTTCTT...TAAAGAGGAATTGATGAATTGTGATTCCAGGAGAGCTGACCCCAGTTGTAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR CAA 72 bp | TCCCCTAATGTACTCCAGCAGGAAGATGTTGAGGTGTaGGGTGTGAGCCTGAAAGATATCTCAGCTGATCAA | + |
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Preference number: 4 (lower is better) Translates to: SPNVLQQEDVEV*GVSLKDISADQ Trigger: TTGATCAGCTGAGATATCTTTCAGGCTCACACCCAACACCTCAACATCTTCCTGCTGGAGTACATTAGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| CDS-3UTR TCA 90 bp | GCTCTCCTGGAATCACAATTCATCAATTCCTCTTTACCAAACTGGCTTAAGCCTGGTGCTGAAGGCTTTTaGCCTACCTTCTGCAGAATG | + |
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Preference number: 4 (lower is better) Translates to: ALLESQFINSSLPNWLKPGAEGF*PTFCRM Trigger: CATTCTGCAGAAGGTAGGTCAAAAGCCTTCAGCACC...AGGCTTAAGCCAGTTTGGTAAAGAGGAATTGATGAATTGTGATTCCAGGAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| CDS-3UTR CCA 90 bp | TTGGATTACAGACGTCTGTGCTTTTGCTGTTCTCATCTGGCTCTTCCTATGTGTGAAACAGCTATCATATaGGAGCCACAGGTGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LDYRRLCFCCSHLALPMCETAII*EPQVLK Trigger: CTTCAGCACCTGTGGCTCCCATATGATAGCTGTTTC...ACACATAGGAAGAGCCAGATGAGAACAGCAAAAGCACAGACGTCTGTAATCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR CAA 72 bp | CTCGCAAACTGGATGTATATTTATGGATATTGGTGCTaGTCTGGCATGGGAAGGTACTACATCCATTCCCTA | + |
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Preference number: 4 (lower is better) Translates to: LANWMYIYGYWC*SGMGRYYIHSL Trigger: TAGGGAATGGATGTAGTACCTTCCCATGCCAGACAAGCACCAATATCCATAAATATACATCCAGTTTGCGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR CAA 72 bp | GTTTCCTCTTTCTTTGGATTACAGACGTCTGTGCTTTaGCTGTTCTCATCTGGCTCTTCCTATGTGTATGTC | + |
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Preference number: 4 (lower is better) Translates to: VSSFFGLQTSVL*LFSSGSSYVYV Trigger: GACATACACATAGGAAGAGCCAGATGAGAACAGCAAAAGCACAGACGTCTGTAATCCAAAGAAAGAGGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| CDS-3UTR CCA 90 bp | TCTGAGGTTTCCTCTTTCTTTGGATTACAGACGTCTGTGCTTTTGCTGTTCTCACTACCTTCTGCAGAATaGATGCTGAGGATGTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: SEVSSFFGLQTSVLLLFSLPSAE*MLRMLK Trigger: TTTCAACATCCTCAGCATCCATTCTGCAGAAGGTAG...TGAGAACAGCAAAAGCACAGACGTCTGTAATCCAAAGAAAGAGGAAACCTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR CAA 72 bp | CAAAATCCTCGCAAACTGGATGTATATTTATGGATATaGGTGCTTGTCTGGCATGGGAAGGTACTACATCCA | + |
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Preference number: 4 (lower is better) Translates to: QNPRKLDVYLWI*VLVWHGKVLHP Trigger: TGGATGTAGTACCTTCCCATGCCAGACAAGCACCAATATCCATAAATATACATCCAGTTTGCGAGGATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| CDS-3UTR TCA 90 bp | TCTGAGGTTTCCTCTTTCTTTGGATTACAGACGTCTGTGCTTTTGCTGTTCTCAACTCAGCATGAGAAATaGTATTCTGCTTCACAAAAC | + |
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Preference number: 4 (lower is better) Translates to: SEVSSFFGLQTSVLLLFSTQHEK*YSASQN Trigger: GTTTTGTGAAGCAGAATATCATTTCTCATGCTGAGT...TGAGAACAGCAAAAGCACAGACGTCTGTAATCCAAAGAAAGAGGAAACCTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR CAA 72 bp | ACTTCTTTGCTTGCAAACATACATTGCAGTAAGTCATaGGTCTATTACCAGGCCTCTGGCTTCTGTTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: TSLLANIHCSKS*VYYQASGFCFS Trigger: AGAAAAACAGAAGCCAGAGGCCTGGTAATAGACCAATGACTTACTGCAATGTATGTTTGCAAGCAAAGAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR CAA 72 bp | TATAACTCAGTATGTGGTTTTAAGGAGGGGTTTGAATaGATCATCTTTCTGCTTCAGACTCTCATCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: YNSVCGFKEGFE*IIFLLQTLICR Trigger: CCTACAGATGAGAGTCTGAAGCAGAAAGATGATCAATTCAAACCCCTCCTTAAAACCACATACTGAGTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| 3UTR CAA 72 bp | GTTTGTTTGTTTGTTTGTTTGTTTGCTATTGCTGATTaGAAAGGCTATGGTTCAAATCCAATGTCTTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: VCLFVCLFAIAD*KGYGSNPMSCA Trigger: AGCACAAGACATTGGATTTGAACCATAGCCTTTCAAATCAGCAATAGCAAACAAACAAACAAACAAACAAAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| CDS-3UTR CAA 90 bp | CCCCTACAACTGGGGTCAGCTCTCCTGGAATCACAATTCATCAATTCCTCTTTAATCTGTCATAAGCCATaGCTGTCAAAATGTAGCATT | + |
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Preference number: 5 (lower is better) Translates to: PLQLGSALLESQFINSSLICHKP*LSKCSI Trigger: AATGCTACATTTTGACAGCAATGGCTTATGACAGAT...TAAAGAGGAATTGATGAATTGTGATTCCAGGAGAGCTGACCCCAGTTGTAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| CDS-3UTR CAA 90 bp | GATAGTGACAGCAATAGTTATGATCAGCTGCTAACACATATACTAGCAAAGGCAGCAGAAGAAAAAGAGTaGAGTCATGCACTCAGCATG | + |
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Preference number: 5 (lower is better) Translates to: DSDSNSYDQLLTHILAKAAEEKE*SHALSM Trigger: CATGCTGAGTGCATGACTCAACTCTTTTTCTTCTGC...TGCCTTTGCTAGTATATGTGTTAGCAGCTGATCATAACTATTGCTGTCACTATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| CDS-3UTR CAA 90 bp | TGGCTTCTGTTTTTCTATCAATACTTGAACCTCTTTGGGACTCCTTTTAGATATGTAGTACATAGGGGTTaGCAGGTGAGGATTCAACAC | + |
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Preference number: 5 (lower is better) Translates to: WLLFFYQYLNLFGTPFRYVVHRG*QVRIQH Trigger: GTGTTGAATCCTCACCTGCAAACCCCTATGTACTAC...ATATCTAAAAGGAGTCCCAAAGAGGTTCAAGTATTGATAGAAAAACAGAAGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000212489.3 |
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| CDS GCA 72 bp | CTATCACAGAAGATCAGGTGTACCATACTGGCAGTATaGGCCATAGCTTCCACAAACCCCATAACATACACC | + |
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Preference number: 6 (lower is better) Translates to: LSQKIRCTILAV*AIASTNPITYT Trigger: GGTGTATGTTATGGGGTTTGTGGAAGCTATGGCGCATACTGCCAGTATGGTACACCTGATCTTCTGTGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074611.3 ENSMUST00000212489.3 |
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| CDS CCA 72 bp | TCCCAAGAAGAAGAAGAAGAGAGGCAGTTGGAGCTCTaGCTGCTGTGTCAAGCCAAGCAGGATAAATTCTTT | + |
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Preference number: 6 (lower is better) Translates to: SQEEEEERQLEL*LLCQAKQDKFF Trigger: AAAGAATTTATCCTGCTTGGCTTGACACAGCAGCCAGAGCTCCAACTGCCTCTCTTCTTCTTCTTCTTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074611.3 ENSMUST00000212489.3 |
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