Pregenerated sensors for OLFR878 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066747Ensembl transcript IDs: ENSMUST00000214263.2, ENSMUST00000216723.3
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGTGCATCAGCAGAGGGGCAACCGGAAGCCTCACTTCCCTTCACTaGTTTATCTTCTACTCTTTCACACACCAAGCATCTCTCCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: VCISRGATGSLTSLH*FIFYSFTHQASLQF Trigger: AAACTGGAGAGATGCTTGGTGTGTGAAAGAGTAGAAGATAAAGCAGTGAAGGGAAGTGAGGCTTCCGGTTGCCCCTCTGCTGATGCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR TCA 90 bp | GTTTCTTCCCTCCTATGGAAGCTTGGATGGTATCTTCTGATACCATaGATGCTAGTCTTCAGAGAAAGAGCATTCAGTTCAGTTCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: VSSLLWKLGWYLLIP*MLVFRERAFSSVPA Trigger: AGCTGGAACTGAACTGAATGCTCTTTCTCTGAAGACTAGCATTCATGGTATCAGAAGATACCATCCAAGCTTCCATAGGAGGGAAGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR TCA 90 bp | GGTTACATATATATTCCACAATGCTTAGTTACCCTTCCTCAGTATTaGCTCTTTTCTAATATCCCAAGAGTCTCATATGCTCTACTTGGG | + |
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Preference number: 1 (lower is better) Translates to: GYIYIPQCLVTLPQY*LFSNIPRVSYALLG Trigger: CCCAAGTAGAGCATATGAGACTCTTGGGATATTAGAAAAGAGTCAATACTGAGGAAGGGTAACTAAGCATTGTGGAATATATATGTAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR GCA 90 bp | ATGCTAGTCTTCAGAGAAAGAGCATTCAGTTCAGTTCCAGCTCAGTACTCTCTGCAAAGTTCCATGATGTaGTCAGCATCTCCAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: MLVFRERAFSSVPAQYSLQSSMM*SASPGK Trigger: CTTCCCTGGAGATGCTGAGCACATCATGGAACTTTG...CAGAGAGTACTGAGCTGGAACTGAACTGAATGCTCTTTCTCTGAAGACTAGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR TCA 90 bp | AAGAGCCCCAGCAATAAGCTATGTGTTTTGGGAATGTCTTGGACAGCCCTGGATCCTAGACTCTACATTTaGTATTTGGTAAGACAGGTC | + |
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Preference number: 2 (lower is better) Translates to: KSPSNKLCVLGMSWTALDPRLYI*YLVRQV Trigger: GACCTGTCTTACCAAATATCAAATGTAGAGTCTAGG...ATCCAGGGCTGTCCAAGACATTCCCAAAACACATAGCTTATTGCTGGGGCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCAATAAGCTATGTGTTTTGGGAATGTCTTGGACAGCCCTGGATATCAACAAGAAGGTAGACAGATaGGACAAAAGGTTGGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: PSNKLCVLGMSWTALDINKKVDR*DKRLAE Trigger: TTCAGCCAACCTTTTGTCTCATCTGTCTACCTTCTT...GTTGATATCCAGGGCTGTCCAAGACATTCCCAAAACACATAGCTTATTGCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR TCA 90 bp | TTCAGTTCAGTTCCAGCTCAGTACTCTCTGGGTCCTGTTTCTAAAGTACATGATCAGTCCAGCCTCCCTTaGACTTGCTATCATTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: FSSVPAQYSLGPVSKVHDQSSLP*TCYHSV Trigger: AACAGAATGATAGCAAGTTCAAGGGAGGCTGGACTG...ATCATGTACTTTAGAAACAGGACCCAGAGAGTACTGAGCTGGAACTGAACTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216723.3 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCCCCAGCAATAAGCTATGTGTTTTGGGAATGTCTTGGACAGCCCTGGATCTCATATGCTCTACTTaGGACTATGCATTTCCCTAT | + |
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Preference number: 2 (lower is better) Translates to: KSPSNKLCVLGMSWTALDLICST*DYAFPY Trigger: ATAGGGAAATGCATAGTCCCAAGTAGAGCATATGAG...ATCCAGGGCTGTCCAAGACATTCCCAAAACACATAGCTTATTGCTGGGGCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR TCA 90 bp | CAGTTCCAGCTCAGTACTCTCTGGGTCCTGTTTCTAAAGTACATGATGTCTTCAAAGAAGGTAGACAGATaGGACAAAAGGTTGGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: QFQLSTLWVLFLKYMMSSKKVDR*DKRLAE Trigger: TTCAGCCAACCTTTTGTCTCATCTGTCTACCTTCTT...TGAAGACATCATGTACTTTAGAAACAGGACCCAGAGAGTACTGAGCTGGAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR CCA 90 bp | TTCCCTCCTATGGAAGCTTGGATGGTATCTTCTGATACCATGAATGCTAGTCTTGTTTTGGGAATGTCTTaGACAGCCCTGGATATCAAC | + |
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Preference number: 2 (lower is better) Translates to: FPPMEAWMVSSDTMNASLVLGMS*TALDIN Trigger: GTTGATATCCAGGGCTGTCCAAGACATTCCCAAAAC...AAGACTAGCATTCATGGTATCAGAAGATACCATCCAAGCTTCCATAGGAGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR TCA 90 bp | AGTACTAGACACAGTCTCATTCTTGTTGAGCAGGTCAAAGTCCAATTAAAGAACTTTTGGCACTCAGAATaGATATCCAGTCCAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: STRHSLILVEQVKVQLKNFWHSE*ISSPAS Trigger: GGAGGCTGGACTGGATATTCATTCTGAGTGCCAAAA...GTTCTTTAATTGGACTTTGACCTGCTCAACAAGAATGAGACTGTGTCTAGTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR TCA 90 bp | TTCAGTTCAGTTCCAGCTCAGTACTCTCTGGGTCCTGTTTCTAAAGTACATGATCAATCAGCCTCACACTaGAGATGTTTCTTCTTGCTA | + |
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Preference number: 2 (lower is better) Translates to: FSSVPAQYSLGPVSKVHDQSASH*RCFFLL Trigger: TAGCAAGAAGAAACATCTTCAGTGTGAGGCTGATTG...ATCATGTACTTTAGAAACAGGACCCAGAGAGTACTGAGCTGGAACTGAACTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR TCA 90 bp | AATTGGGTAACACTGTCAGTTTCTTCCCTCCTATGGAAGCTTGGATGGTATCTTAAGGTTTTTGCTAGGTaGTCTTTGTATCTTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: NWVTLSVSSLLWKLGWYLKVFAR*SLYLGG Trigger: CCCTCCAAGATACAAAGATCACCTAGCAAAAACCTT...AAGATACCATCCAAGCTTCCATAGGAGGGAAGAAACTGACAGTGTTACCCAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCAATAAGCTATGTGTTTTGGGAATGTCTTGGACAGCCCTGGATATCAACGATGAGACAAAAGGTTaGCTGAAGCAGAAAAATGAA | + |
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Preference number: 2 (lower is better) Translates to: PSNKLCVLGMSWTALDINDETKG*LKQKNE Trigger: TTCATTTTTCTGCTTCAGCCAACCTTTTGTCTCATC...GTTGATATCCAGGGCTGTCCAAGACATTCCCAAAACACATAGCTTATTGCTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR CCA 90 bp | TCAGTTCCAGCTCAGTACTCTCTGGGTCCTGTTTCTAAAGTACATGATGTCTTCGCACCTACTTGGAGATaGGAAAATCTAAATCTACCT | + |
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Preference number: 2 (lower is better) Translates to: SVPAQYSLGPVSKVHDVFAPTWR*ENLNLP Trigger: AGGTAGATTTAGATTTTCCCATCTCCAAGTAGGTGC...GAAGACATCATGTACTTTAGAAACAGGACCCAGAGAGTACTGAGCTGGAACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214263.2 |
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| 3UTR-3UTR TCA 90 bp | AATTGGGTAACACTGTCAGTTTCTTCCCTCCTATGGAAGCTTGGATGGTATCTTAGACAAAAGGTTGGCTaGAGCAGAAAAATGAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: NWVTLSVSSLLWKLGWYLRQKVG*SRKMKS Trigger: ACTCTTCATTTTTCTGCTTCAGCCAACCTTTTGTCT...AAGATACCATCCAAGCTTCCATAGGAGGGAAGAAACTGACAGTGTTACCCAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR TCA 90 bp | AGTACTAGACACAGTCTCATTCTTGTTGAGCAGGTCAAAGTCCAATTAAAGAACCCAGTCCAGCCTCCCTaGGAGAAAGAAAAGTATTTT | + |
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Preference number: 2 (lower is better) Translates to: STRHSLILVEQVKVQLKNPVQPP*EKEKYF Trigger: AAAATACTTTTCTTTCTCTCAGGGAGGCTGGACTGG...GTTCTTTAATTGGACTTTGACCTGCTCAACAAGAATGAGACTGTGTCTAGTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214263.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCCTCCTATGGAAGCTTGGATGGTATCTTCTGATACCATGAATGCTAGTCTTCATAGTGGTAGAGAATaGTTTTTGGCACTCAGAATG | + |
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Preference number: 2 (lower is better) Translates to: FPPMEAWMVSSDTMNASLHSGRE*FLALRM Trigger: CATTCTGAGTGCCAAAAATCATTCTCTACCACTATG...AAGACTAGCATTCATGGTATCAGAAGATACCATCCAAGCTTCCATAGGAGGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR TCA 90 bp | ATGCTAGTCTTCAGAGAAAGAGCATTCAGTTCAGTTCCAGCTCAGTACTCTCTGACATCATCTTTCATTTaGCTTTCCCATTGTCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: MLVFRERAFSSVPAQYSLTSSFI*LSHCPK Trigger: CTTTGGACAATGGGAAAGTCAAATGAAAGATGATGT...CAGAGAGTACTGAGCTGGAACTGAACTGAATGCTCTTTCTCTGAAGACTAGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR GCA 90 bp | TTCAGTTCAGTTCCAGCTCAGTACTCTCTGGGTCCTGTTTCTAAAGTACATGATCTCACTTCCCTTCACTaGTTTATCTTCTACTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: FSSVPAQYSLGPVSKVHDLTSLH*FIFYSF Trigger: GAAAGAGTAGAAGATAAAGCAGTGAAGGGAAGTGAG...ATCATGTACTTTAGAAACAGGACCCAGAGAGTACTGAGCTGGAACTGAACTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR GCA 90 bp | CCCAGCAATAAGCTATGTGTTTTGGGAATGTCTTGGACAGCCCTGGATATCAACATATATATTCCACAATaGTTAGTTACCCTTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: PSNKLCVLGMSWTALDINIYIPQ*LVTLPQ Trigger: CTGAGGAAGGGTAACTAAGCATTGTGGAATATATAT...GTTGATATCCAGGGCTGTCCAAGACATTCCCAAAACACATAGCTTATTGCTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR CCA 90 bp | AATAAGCTATGTGTTTTGGGAATGTCTTGGACAGCCCTGGATATCAACTTAAGAACCACCTATGACATCTaGCTTATGACTCCACCAAGA | + |
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Preference number: 2 (lower is better) Translates to: NKLCVLGMSWTALDINLRTTYDI*LMTPPR Trigger: TCTTGGTGGAGTCATAAGCCAGATGTCATAGGTGGT...TCTTAAGTTGATATCCAGGGCTGTCCAAGACATTCCCAAAACACATAGCTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTTTTGGGAATGTCTTGGACAGCCCTGGATATCAACTTAAGAGAGGAGTTCTCATATGCTCTACTTaGGACTATGCATTTCCCTAT | + |
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Preference number: 2 (lower is better) Translates to: MCFGNVLDSPGYQLKRGVLICST*DYAFPY Trigger: ATAGGGAAATGCATAGTCCCAAGTAGAGCATATGAG...AACTCCTCTCTTAAGTTGATATCCAGGGCTGTCCAAGACATTCCCAAAACACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR CAA 90 bp | CTGTTCTTCCACAAAAAGGAGTCTGGACTTTCACATTTCTCAATATaGTCCAATATAGCCCTATCTTCATTTTCCTCCATATACCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LFFHKKESGLSHFSI*SNIALSSFSSIYPG Trigger: CCCTGGGTATATGGAGGAAAATGAAGATAGGGCTATATTGGACAATATTGAGAAATGTGAAAGTCCAGACTCCTTTTTGTGGAAGAACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR TCA 90 bp | CTCCATCTGCTTCAAAGAGAAGTTTTCTTGATAAGAGGCAAAGACTACATTTATTTTTGGCACTCAGAATaGATATCCAGTCCAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LHLLQREVFLIRGKDYIYFWHSE*ISSPAS Trigger: GGAGGCTGGACTGGATATTCATTCTGAGTGCCAAAA...ATAAATGTAGTCTTTGCCTCTTATCAAGAAAACTTCTCTTTGAAGCAGATGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR TCA 90 bp | TCTCTGGGTCCTGTTTCTAAAGTACATGATGTCTTCAGCAATAGGTACTTACCTACCCTTCCTCAGTATTaGCTCTTTTCTAATATCCCA | + |
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Preference number: 2 (lower is better) Translates to: SLGPVSKVHDVFSNRYLPTLPQY*LFSNIP Trigger: TGGGATATTAGAAAAGAGTCAATACTGAGGAAGGGT...AGGTAAGTACCTATTGCTGAAGACATCATGTACTTTAGAAACAGGACCCAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR TCA 90 bp | AGTACTAGACACAGTCTCATTCTTGTTGAGCAGGTCAAAGTCCAATTAAAGAACAAGGTTTTTGCTAGGTaGTCTTTGTATCTTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: STRHSLILVEQVKVQLKNKVFAR*SLYLGG Trigger: CCCTCCAAGATACAAAGATCACCTAGCAAAAACCTT...GTTCTTTAATTGGACTTTGACCTGCTCAACAAGAATGAGACTGTGTCTAGTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAAGACTGAATATCATAGGATTAAATCCAATAAATGAGGTACTATGCACTCAAAGTTCCATGATGTaGTCAGCATCTCCAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: PGRLNIIGLNPINEVLCTQSSMM*SASPGK Trigger: CTTCCCTGGAGATGCTGAGCACATCATGGAACTTTG...AGTGCATAGTACCTCATTTATTGGATTTAATCCTATGATATTCAGTCTTCCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR TCA 90 bp | AATAAGCTATGTGTTTTGGGAATGTCTTGGACAGCCCTGGATATCAACTTAAGAGCTGAAGCAGAAAAATaGAGAGTTCAAGGTATTCCT | + |
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Preference number: 2 (lower is better) Translates to: NKLCVLGMSWTALDINLRAEAEK*RVQGIP Trigger: AGGAATACCTTGAACTCTTCATTTTTCTGCTTCAGC...TCTTAAGTTGATATCCAGGGCTGTCCAAGACATTCCCAAAACACATAGCTTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR TCA 90 bp | GCTAGGCCAGGAAGACTGAATATCATAGGATTAAATCCAATAAATGAGGTACTAAGACAAAAGGTTGGCTaGAGCAGAAAAATGAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: ARPGRLNIIGLNPINEVLRQKVG*SRKMKS Trigger: ACTCTTCATTTTTCTGCTTCAGCCAACCTTTTGTCT...TAGTACCTCATTTATTGGATTTAATCCTATGATATTCAGTCTTCCTGGCCTAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR TCA 90 bp | CTCCATCTGCTTCAAAGAGAAGTTTTCTTGATAAGAGGCAAAGACTACATTTATGCTGAAGCAGAAAAATaGAGAGTTCAAGGTATTCCT | + |
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Preference number: 2 (lower is better) Translates to: LHLLQREVFLIRGKDYIYAEAEK*RVQGIP Trigger: AGGAATACCTTGAACTCTTCATTTTTCTGCTTCAGC...ATAAATGTAGTCTTTGCCTCTTATCAAGAAAACTTCTCTTTGAAGCAGATGGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR TCA 90 bp | CTCCATCTGCTTCAAAGAGAAGTTTTCTTGATAAGAGGCAAAGACTACATTTATCATAGTGGTAGAGAATaGTTTTTGGCACTCAGAATG | + |
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Preference number: 2 (lower is better) Translates to: LHLLQREVFLIRGKDYIYHSGRE*FLALRM Trigger: CATTCTGAGTGCCAAAAATCATTCTCTACCACTATG...ATAAATGTAGTCTTTGCCTCTTATCAAGAAAACTTCTCTTTGAAGCAGATGGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR CCA 90 bp | GCTAGGCCAGGAAGACTGAATATCATAGGATTAAATCCAATAAATGAGGTACTAGATGAGACAAAAGGTTaGCTGAAGCAGAAAAATGAA | + |
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Preference number: 2 (lower is better) Translates to: ARPGRLNIIGLNPINEVLDETKG*LKQKNE Trigger: TTCATTTTTCTGCTTCAGCCAACCTTTTGTCTCATC...TAGTACCTCATTTATTGGATTTAATCCTATGATATTCAGTCTTCCTGGCCTAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR TCA 90 bp | CTCCATCTGCTTCAAAGAGAAGTTTTCTTGATAAGAGGCAAAGACTACATTTATACATCATCTTTCATTTaGCTTTCCCATTGTCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LHLLQREVFLIRGKDYIYTSSFI*LSHCPK Trigger: CTTTGGACAATGGGAAAGTCAAATGAAAGATGATGT...ATAAATGTAGTCTTTGCCTCTTATCAAGAAAACTTCTCTTTGAAGCAGATGGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAAGACTGAATATCATAGGATTAAATCCAATAAATGAGGTACTATGCACTACTCAAGCACCTACTTaGAGATGGGAAAATCTAAAT | + |
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Preference number: 2 (lower is better) Translates to: PGRLNIIGLNPINEVLCTTQAPT*RWENLN Trigger: ATTTAGATTTTCCCATCTCCAAGTAGGTGCTTGAGT...AGTGCATAGTACCTCATTTATTGGATTTAATCCTATGATATTCAGTCTTCCTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214263.2 |
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| 3UTR GCA 72 bp | AGCAGAGGGGCAACCGGAAGCCTCACTTCCCTTCACTaGTTTATCTTCTACTCTTTCACACACCAAGCATCT | + |
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Preference number: 3 (lower is better) Translates to: SRGATGSLTSLH*FIFYSFTHQAS Trigger: AGATGCTTGGTGTGTGAAAGAGTAGAAGATAAAGCAGTGAAGGGAAGTGAGGCTTCCGGTTGCCCCTCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR CAA 90 bp | AATTGGGTAACACTGTCAGTTTCTTCCCTCCTATGGAAGCTTGGATGGTATCTTCCAGTCCAGCCTCCCTaGAACTTGCTATCATTCTGT | + |
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Preference number: 3 (lower is better) Translates to: NWVTLSVSSLLWKLGWYLPVQPP*NLLSFC Trigger: ACAGAATGATAGCAAGTTCAAGGGAGGCTGGACTGG...AAGATACCATCCAAGCTTCCATAGGAGGGAAGAAACTGACAGTGTTACCCAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216723.3 |
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| 3UTR TCA 72 bp | GGAGTTCTCGTGTCTAGTGCTAAGGTTTTTGCTAGGTaGTCTTTGTATCTTGGAGGGAACACCATCACCCAA | + |
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Preference number: 3 (lower is better) Translates to: GVLVSSAKVFAR*SLYLGGNTITQ Trigger: TTGGGTGATGGTGTTCCCTCCAAGATACAAAGATCACCTAGCAAAAACCTTAGCACTAGACACGAGAACTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR CCA 72 bp | AGCCCCAGCAATAAGCTATGTGTTTTGGGAATGTCTTaGACAGCCCTGGATATCAACTTAAGAGAGGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: SPSNKLCVLGMS*TALDINLREEF Trigger: GAACTCCTCTCTTAAGTTGATATCCAGGGCTGTCCAAGACATTCCCAAAACACATAGCTTATTGCTGGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR CAA 90 bp | AAGAGCCCCAGCAATAAGCTATGTGTTTTGGGAATGTCTTGGACAGCCCTGGATAACTCAAGCACCTACTaGGAGATGGGAAAATCTAAA | + |
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Preference number: 3 (lower is better) Translates to: KSPSNKLCVLGMSWTALDNSSTY*EMGKSK Trigger: TTTAGATTTTCCCATCTCCAAGTAGGTGCTTGAGTT...ATCCAGGGCTGTCCAAGACATTCCCAAAACACATAGCTTATTGCTGGGGCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214263.2 |
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| 3UTR-3UTR CAA 90 bp | AGTACTAGACACAGTCTCATTCTTGTTGAGCAGGTCAAAGTCCAATTAAAGAACTACTTACCTTCCACCTaGAGGGGAAAACCAAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: STRHSLILVEQVKVQLKNYLPST*RGKPRA Trigger: GGCTCTTGGTTTTCCCCTCAAGGTGGAAGGTAAGTA...GTTCTTTAATTGGACTTTGACCTGCTCAACAAGAATGAGACTGTGTCTAGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR GCA 72 bp | CTAGTCAATCAGCCTCACACTGAAGATGTTTCTTCTTaGTACTCTAAGCTACCACCTATGACATCTGGCTTA | + |
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Preference number: 3 (lower is better) Translates to: LVNQPHTEDVSS*YSKLPPMTSGL Trigger: TAAGCCAGATGTCATAGGTGGTAGCTTAGAGTAGCAAGAAGAAACATCTTCAGTGTGAGGCTGATTGACTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR CAA 90 bp | AATTGGGTAACACTGTCAGTTTCTTCCCTCCTATGGAAGCTTGGATGGTATCTTTCTCATATGCTCTACTaGGGACTATGCATTTCCCTA | + |
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Preference number: 3 (lower is better) Translates to: NWVTLSVSSLLWKLGWYLSHMLY*GLCISL Trigger: TAGGGAAATGCATAGTCCCAAGTAGAGCATATGAGA...AAGATACCATCCAAGCTTCCATAGGAGGGAAGAAACTGACAGTGTTACCCAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR CAA 90 bp | TCAGTTCCAGCTCAGTACTCTCTGGGTCCTGTTTCTAAAGTACATGATGTCTTCGAAAGAAAGCCTTGTTaGTGGAAAGTGTATTTGAGT | + |
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Preference number: 3 (lower is better) Translates to: SVPAQYSLGPVSKVHDVFERKPC*WKVYLS Trigger: ACTCAAATACACTTTCCACAAACAAGGCTTTCTTTC...GAAGACATCATGTACTTTAGAAACAGGACCCAGAGAGTACTGAGCTGGAACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
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| 3UTR-3UTR CAA 90 bp | TCTACTTGGGACTATGCATTTCCCTATAAAAAGTGGGATTTAGCTAGGCCAGGACATTTGACTTTCCCATaGTCCAAAGTAAAAGCACCA | + |
|
Preference number: 3 (lower is better) Translates to: STWDYAFPYKKWDLARPGHLTFP*SKVKAP Trigger: TGGTGCTTTTACTTTGGACAATGGGAAAGTCAAATG...TCCTGGCCTAGCTAAATCCCACTTTTTATAGGGAAATGCATAGTCCCAAGTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| 3UTR-3UTR CAA 90 bp | AATTGGGTAACACTGTCAGTTTCTTCCCTCCTATGGAAGCTTGGATGGTATCTTGAAAGAAAGCCTTGTTaGTGGAAAGTGTATTTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: NWVTLSVSSLLWKLGWYLERKPC*WKVYLS Trigger: ACTCAAATACACTTTCCACAAACAAGGCTTTCTTTC...AAGATACCATCCAAGCTTCCATAGGAGGGAAGAAACTGACAGTGTTACCCAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| 3UTR CCA 72 bp | TGCTCTACTTGGGACTATGCATTTCCCTATAAAAAGTaGGATTTAGCTAGGCCAGGAAGACTGAATATCATA | + |
|
Preference number: 3 (lower is better) Translates to: CSTWDYAFPYKK*DLARPGRLNII Trigger: TATGATATTCAGTCTTCCTGGCCTAGCTAAATCCCACTTTTTATAGGGAAATGCATAGTCCCAAGTAGAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAGGGTAATATGAGGGCATACTTCTTAAAAGATGAGCTATTCGATATAGAAAGACAGGTCATAAAGTaGATAAAATTGTTCCGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TQGNMRAYFLKDELFDIERQVIK*IKLFRG Trigger: GCCCCGGAACAATTTTATCAACTTTATGACCTGTCT...TTCTATATCGAATAGCTCATCTTTTAAGAAGTATGCCCTCATATTACCCTGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| 3UTR-3UTR CAA 90 bp | AGTACTAGACACAGTCTCATTCTTGTTGAGCAGGTCAAAGTCCAATTAAAGAACAAGCTGACCTTGAACTaGCTATCATTCTGTTTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: STRHSLILVEQVKVQLKNKLTLN*LSFCFS Trigger: GCTAAAACAGAATGATAGCAAGTTCAAGGTCAGCTT...GTTCTTTAATTGGACTTTGACCTGCTCAACAAGAATGAGACTGTGTCTAGTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214263.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGAAGACTGAATATCATAGGATTAAATCCAATAAATGAGGTACTATGCACTAGACAGGTCATAAAGTaGATAAAATTGTTCCGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: PGRLNIIGLNPINEVLCTRQVIK*IKLFRG Trigger: GCCCCGGAACAATTTTATCAACTTTATGACCTGTCT...AGTGCATAGTACCTCATTTATTGGATTTAATCCTATGATATTCAGTCTTCCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| 3UTR TCA 72 bp | TATATTCCACAATGCTTAGTTACCCTTCCTCAGTATTaGCTCTTTTCTAATATCCCAAGAGTCTCATATGCT | + |
|
Preference number: 3 (lower is better) Translates to: YIPQCLVTLPQY*LFSNIPRVSYA Trigger: AGCATATGAGACTCTTGGGATATTAGAAAAGAGTCAATACTGAGGAAGGGTAACTAAGCATTGTGGAATATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| 3UTR CCA 72 bp | TGGACACATACACAAACTCAAGCACCTACTTGGAGATaGGAAAATCTAAATCTACCTTATAAAATAAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: WTHTQTQAPTWR*ENLNLPYKIKE Trigger: CTCCTTTATTTTATAAGGTAGATTTAGATTTTCCCATCTCCAAGTAGGTGCTTGAGTTTGTGTATGTGTCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214263.2 |
||
| 3UTR GCA 72 bp | TTAGTAGATGCAAAGTTTGGCCAAAGTGATACCAAGTaGTATAATCCTCAAAAAGATCTCCAGTTTTTAACA | + |
|
Preference number: 3 (lower is better) Translates to: LVDAKFGQSDTK*YNPQKDLQFLT Trigger: TGTTAAAAACTGGAGATCTTTTTGAGGATTATAGCACTTGGTATCACTTTGGCCAAACTTTGCATCTACTAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR CCA 90 bp | CCCAGCAATAAGCTATGTGTTTTGGGAATGTCTTGGACAGCCCTGGATATCAACAGCATGCTTCCAGTATaGGCCATGGCTCCAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PSNKLCVLGMSWTALDINSMLPV*AMAPAN Trigger: GTTTGCTGGAGCCATGGCCCATACTGGAAGCATGCT...GTTGATATCCAGGGCTGTCCAAGACATTCCCAAAACACATAGCTTATTGCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR TCA 90 bp | AAGAGCCCCAGCAATAAGCTATGTGTTTTGGGAATGTCTTGGACAGCCCTGGATAGGTTGTTAAATAGGTaGATGCCCCTGACCCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KSPSNKLCVLGMSWTALDRLLNR*MPLTQK Trigger: TTTTTGGGTCAGGGGCATTCACCTATTTAACAACCT...ATCCAGGGCTGTCCAAGACATTCCCAAAACACATAGCTTATTGCTGGGGCTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR TCA 90 bp | ATGTGTTTTGGGAATGTCTTGGACAGCCCTGGATATCAACTTAAGAGAGGAGTTCCTTCCCTCTTCCATTaGACCAGGGAAAGAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: MCFGNVLDSPGYQLKRGVPSLFH*TRERGC Trigger: ACAACCTCTTTCCCTGGTTCAATGGAAGAGGGAAGG...AACTCCTCTCTTAAGTTGATATCCAGGGCTGTCCAAGACATTCCCAAAACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGACAGGGCAGCATGTTACATAATCATGCAAAAGCATAGAAGTTCTGTGCATGGGAACCACATGTaGCAAAGGCTTTGGATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GKDRAACYIIMQKHRSSVHGNHM*QRLWIY Trigger: GTAGATCCAAAGCCTTTGGCACATGTGGTTCCCATG...CACAGAACTTCTATGCTTTTGCATGATTATGTAACATGCTGCCCTGTCCTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGACAGGGCAGCATGTTACATAATCATGCAAAAGCATAGAAGTTCTGTGCGTTGGCATAGGTACTaGTGCAGGAGAGCTGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GKDRAACYIIMQKHRSSVRWHRY*CRRAVK Trigger: TTTTACAGCTCTCCTGCACCAGTACCTATGCCAACG...CACAGAACTTCTATGCTTTTGCATGATTATGTAACATGCTGCCCTGTCCTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| 3UTR CAA 72 bp | GGGAAAACCAAGAGCCCCAGCAATAAGCTATGTGTTTaGGGAATGTCTTGGACAGCCCTGGATATCAACTTA | + |
|
Preference number: 4 (lower is better) Translates to: GKTKSPSNKLCV*GMSWTALDINL Trigger: TAAGTTGATATCCAGGGCTGTCCAAGACATTCCCAAAACACATAGCTTATTGCTGGGGCTCTTGGTTTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR TCA 90 bp | AAGAGCCCCAGCAATAAGCTATGTGTTTTGGGAATGTCTTGGACAGCCCTGGATTCAACATTTTTGGCGTaGACACACAGGAATAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSPSNKLCVLGMSWTALDSTFLA*THRNNR Trigger: TCTGTTATTCCTGTGTGTTCACGCCAAAAATGTTGA...ATCCAGGGCTGTCCAAGACATTCCCAAAACACATAGCTTATTGCTGGGGCTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR GCA 90 bp | ATGTGTTTTGGGAATGTCTTGGACAGCCCTGGATATCAACTTAAGAGAGGAGTTAAAACATCAGCAGAGTaGAGACCTGAGGAGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: MCFGNVLDSPGYQLKRGVKTSAE*RPEETW Trigger: CCATGTCTCCTCAGGTCTGCACTCTGCTGATGTTTT...AACTCCTCTCTTAAGTTGATATCCAGGGCTGTCCAAGACATTCCCAAAACACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR GCA 90 bp | TTCAGTTCAGTTCCAGCTCAGTACTCTCTGGGTCCTGTTTCTAAAGTACATGATGATGCTGATGCTGGATaGTGTGATGACTACTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSSVPAQYSLGPVSKVHDDADAG*CDDYSN Trigger: GTTGGAGTAGTCATCACAGCATCCAGCATCAGCATC...ATCATGTACTTTAGAAACAGGACCCAGAGAGTACTGAGCTGGAACTGAACTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR CCA 90 bp | AGTACTAGACACAGTCTCATTCTTGTTGAGCAGGTCAAAGTCCAATTAAAGAACAGCATGCTTCCAGTATaGGCCATGGCTCCAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: STRHSLILVEQVKVQLKNSMLPV*AMAPAN Trigger: GTTTGCTGGAGCCATGGCCCATACTGGAAGCATGCT...GTTCTTTAATTGGACTTTGACCTGCTCAACAAGAATGAGACTGTGTCTAGTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR TCA 90 bp | CAGTTCCAGCTCAGTACTCTCTGGGTCCTGTTTCTAAAGTACATGATGTCTTCAAGGTTGTTAAATAGGTaGATGCCCCTGACCCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QFQLSTLWVLFLKYMMSSRLLNR*MPLTQK Trigger: TTTTTGGGTCAGGGGCATTCACCTATTTAACAACCT...TGAAGACATCATGTACTTTAGAAACAGGACCCAGAGAGTACTGAGCTGGAACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR TCA 90 bp | TCAGTTCCAGCTCAGTACTCTCTGGGTCCTGTTTCTAAAGTACATGATGTCTTCAAGTACATTGGAGTATaGAGACTGGAATTCAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVPAQYSLGPVSKVHDVFKYIGV*RLEFNP Trigger: TGGGTTGAATTCCAGTCTTCATACTCCAATGTACTT...GAAGACATCATGTACTTTAGAAACAGGACCCAGAGAGTACTGAGCTGGAACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR TCA 90 bp | TTTCATTTGACTTTCCCATTGTCCAAAGTAAAAGCACCAAGGTTTTCTCAAGAAAGCAGAGTGCAGACCTaGGGAGACATGGTAACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FHLTFPLSKVKAPRFSQESRVQT*GDMVTV Trigger: CACAGTTACCATGTCTCCTCAGGTCTGCACTCTGCT...TTCTTGAGAAAACCTTGGTGCTTTTACTTTGGACAATGGGAAAGTCAAATGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR CCA 90 bp | AATAAGCTATGTGTTTTGGGAATGTCTTGGACAGCCCTGGATATCAACTTAAGAAGCTGGAGAGCTGGTTaGTTTGAAAATCCCACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKLCVLGMSWTALDINLRSWRAG*FENPTR Trigger: CCTTGTGGGATTTTCAAACCAACCAGCTCTCCAGCT...TCTTAAGTTGATATCCAGGGCTGTCCAAGACATTCCCAAAACACATAGCTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR CCA 90 bp | AGTACTAGACACAGTCTCATTCTTGTTGAGCAGGTCAAAGTCCAATTAAAGAACAGCTGGAGAGCTGGTTaGTTTGAAAATCCCACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: STRHSLILVEQVKVQLKNSWRAG*FENPTR Trigger: CCTTGTGGGATTTTCAAACCAACCAGCTCTCCAGCT...GTTCTTTAATTGGACTTTGACCTGCTCAACAAGAATGAGACTGTGTCTAGTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR TCA 90 bp | TCTACTTGGGACTATGCATTTCCCTATAAAAAGTGGGATTTAGCTAGGCCAGGATCAACATTTTTGGCGTaGACACACAGGAATAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: STWDYAFPYKKWDLARPGSTFLA*THRNNR Trigger: TCTGTTATTCCTGTGTGTTCACGCCAAAAATGTTGA...TCCTGGCCTAGCTAAATCCCACTTTTTATAGGGAAATGCATAGTCCCAAGTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR TCA 90 bp | TCAGGGCTCATAAGTTTCTTGGATGAGAACTTTTCTTATGTATATACATGTACGCCTTCCCTCTTCCATTaGACCAGGGAAAGAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGLISFLDENFSYVYTCTPSLFH*TRERGC Trigger: ACAACCTCTTTCCCTGGTTCAATGGAAGAGGGAAGG...CGTACATGTATATACATAAGAAAAGTTCTCATCCAAGAAACTTATGAGCCCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR TCA 90 bp | GGGAAGGACAGGGCAGCATGTTACATAATCATGCAAAAGCATAGAAGTTCTGTGATTGGTATAAAATACTaGAGCAAACCTTCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKDRAACYIIMQKHRSSVIGIKY*SKPSLF Trigger: GAAGAGGGAAGGTTTGCTTCAGTATTTTATACCAAT...CACAGAACTTCTATGCTTTTGCATGATTATGTAACATGCTGCCCTGTCCTTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR CCA 90 bp | GCTAGGCCAGGAAGACTGAATATCATAGGATTAAATCCAATAAATGAGGTACTACGTTGGCATAGGTACTaGTGCAGGAGAGCTGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ARPGRLNIIGLNPINEVLRWHRY*CRRAVK Trigger: TTTTACAGCTCTCCTGCACCAGTACCTATGCCAACG...TAGTACCTCATTTATTGGATTTAATCCTATGATATTCAGTCTTCCTGGCCTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR TCA 90 bp | AATTGGGTAACACTGTCAGTTTCTTCCCTCCTATGGAAGCTTGGATGGTATCTTAAACCCTATCACATATaGACAAAACATCAGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NWVTLSVSSLLWKLGWYLKPYHI*TKHQQS Trigger: ACTCTGCTGATGTTTTGTTCATATGTGATAGGGTTT...AAGATACCATCCAAGCTTCCATAGGAGGGAAGAAACTGACAGTGTTACCCAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR TCA 90 bp | AATTGGGTAACACTGTCAGTTTCTTCCCTCCTATGGAAGCTTGGATGGTATCTTATTGGTATAAAATACTaGAGCAAACCTTCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NWVTLSVSSLLWKLGWYLIGIKY*SKPSLF Trigger: GAAGAGGGAAGGTTTGCTTCAGTATTTTATACCAAT...AAGATACCATCCAAGCTTCCATAGGAGGGAAGAAACTGACAGTGTTACCCAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR GCA 90 bp | TCAGGGCTCATAAGTTTCTTGGATGAGAACTTTTCTTATGTATATACATGTACGAAAACATCAGCAGAGTaGAGACCTGAGGAGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: SGLISFLDENFSYVYTCTKTSAE*RPEETW Trigger: CCATGTCTCCTCAGGTCTGCACTCTGCTGATGTTTT...CGTACATGTATATACATAAGAAAAGTTCTCATCCAAGAAACTTATGAGCCCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR GCA 90 bp | CTCCATCTGCTTCAAAGAGAAGTTTTCTTGATAAGAGGCAAAGACTACATTTATGATGCTGATGCTGGATaGTGTGATGACTACTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LHLLQREVFLIRGKDYIYDADAG*CDDYSN Trigger: GTTGGAGTAGTCATCACAGCATCCAGCATCAGCATC...ATAAATGTAGTCTTTGCCTCTTATCAAGAAAACTTCTCTTTGAAGCAGATGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR TCA 90 bp | ACCCAGGGTAATATGAGGGCATACTTCTTAAAAGATGAGCTATTCGATATAGAAAAGTACATTGGAGTATaGAGACTGGAATTCAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQGNMRAYFLKDELFDIEKYIGV*RLEFNP Trigger: TGGGTTGAATTCCAGTCTTCATACTCCAATGTACTT...TTCTATATCGAATAGCTCATCTTTTAAGAAGTATGCCCTCATATTACCCTGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR CCA 90 bp | AGTACTAGACACAGTCTCATTCTTGTTGAGCAGGTCAAAGTCCAATTAAAGAACTTGGAGTATGAAGACTaGAATTCAACCCAATTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: STRHSLILVEQVKVQLKNLEYED*NSTQLR Trigger: CCTTAATTGGGTTGAATTCCAGTCTTCATACTCCAA...GTTCTTTAATTGGACTTTGACCTGCTCAACAAGAATGAGACTGTGTCTAGTACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR TCA 90 bp | GCTAGGCCAGGAAGACTGAATATCATAGGATTAAATCCAATAAATGAGGTACTAAAACCCTATCACATATaGACAAAACATCAGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARPGRLNIIGLNPINEVLKPYHI*TKHQQS Trigger: ACTCTGCTGATGTTTTGTTCATATGTGATAGGGTTT...TAGTACCTCATTTATTGGATTTAATCCTATGATATTCAGTCTTCCTGGCCTAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR CCA 90 bp | CATTTGACTTTCCCATTGTCCAAAGTAAAAGCACCAAGGTTTTCTCAAGAATACATCACTCAACATTTTTaGCGTGAACACACAGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: HLTFPLSKVKAPRFSQEYITQHF*REHTGI Trigger: TATTCCTGTGTGTTCACGCCAAAAATGTTGAGTGAT...GTATTCTTGAGAAAACCTTGGTGCTTTTACTTTGGACAATGGGAAAGTCAAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR CCA 90 bp | TTTCATTTGACTTTCCCATTGTCCAAAGTAAAAGCACCAAGGTTTTCTCAAGAATTGGAGTATGAAGACTaGAATTCAACCCAATTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FHLTFPLSKVKAPRFSQELEYED*NSTQLR Trigger: CCTTAATTGGGTTGAATTCCAGTCTTCATACTCCAA...TTCTTGAGAAAACCTTGGTGCTTTTACTTTGGACAATGGGAAAGTCAAATGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| 3UTR CAA 72 bp | CACAAAAAGGAGTCTGGACTTTCACATTTCTCAATATaGTCCAATATAGCCCTATCTTCATTTTCCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: HKKESGLSHFSI*SNIALSSFSSI Trigger: TATGGAGGAAAATGAAGATAGGGCTATATTGGACAATATTGAGAAATGTGAAAGTCCAGACTCCTTTTTGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| 3UTR CAA 72 bp | AGACATAGAATCCAAGTAAAAGACATCATCTTTCATTaGACTTTCCCATTGTCCAAAGTAAAAGCACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RHRIQVKDIIFH*TFPLSKVKAPR Trigger: CCTTGGTGCTTTTACTTTGGACAATGGGAAAGTCAAATGAAAGATGATGTCTTTTACTTGGATTCTATGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| 3UTR CAA 72 bp | AGTAGTGGTCTCCATCTGCTTCAAAGAGAAGTTTTCTaGATAAGAGGCAAAGACTACATTTATTTGTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SSGLHLLQREVF*IRGKDYIYLLV Trigger: TACCAACAAATAAATGTAGTCTTTGCCTCTTATCAAGAAAACTTCTCTTTGAAGCAGATGGAGACCACTACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR CAA 90 bp | CCCAGCAATAAGCTATGTGTTTTGGGAATGTCTTGGACAGCCCTGGATATCAACGTGATCAGTCCCAAATaGCCTATAACAGTCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PSNKLCVLGMSWTALDINVISPK*PITVST Trigger: TGTGCTGACTGTTATAGGCAATTTGGGACTGATCAC...GTTGATATCCAGGGCTGTCCAAGACATTCCCAAAACACATAGCTTATTGCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR CAA 90 bp | TTCAGTTCAGTTCCAGCTCAGTACTCTCTGGGTCCTGTTTCTAAAGTACATGATACCTTCCCTCTTCCATaGAACCAGGGAAAGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSSVPAQYSLGPVSKVHDTFPLP*NQGKRL Trigger: CAACCTCTTTCCCTGGTTCAATGGAAGAGGGAAGGT...ATCATGTACTTTAGAAACAGGACCCAGAGAGTACTGAGCTGGAACTGAACTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR CAA 90 bp | TCTCTGGGTCCTGTTTCTAAAGTACATGATGTCTTCAGCAATAGGTACTTACCTACCTTCCCTCTTCCATaGAACCAGGGAAAGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLGPVSKVHDVFSNRYLPTFPLP*NQGKRL Trigger: CAACCTCTTTCCCTGGTTCAATGGAAGAGGGAAGGT...AGGTAAGTACCTATTGCTGAAGACATCATGTACTTTAGAAACAGGACCCAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||
| CDS-3UTR CAA 90 bp | CCAGGAAGACTGAATATCATAGGATTAAATCCAATAAATGAGGTACTATGCACTGTGATCAGTCCCAAATaGCCTATAACAGTCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PGRLNIIGLNPINEVLCTVISPK*PITVST Trigger: TGTGCTGACTGTTATAGGCAATTTGGGACTGATCAC...AGTGCATAGTACCTCATTTATTGGATTTAATCCTATGATATTCAGTCTTCCTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214263.2 ENSMUST00000216723.3 |
||