Pregenerated sensors for OLFR876 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066750Ensembl transcript IDs: ENSMUST00000086064.3, ENSMUST00000213368.2, ENSMUST00000215287.2
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGTGAGTCTCTTCCAAGCAGCTCAGCTGGTCTCTGTTTCTTCCTaGTGGCCTGGTCTATCTCAGTCTCTTCTAGGCAGCTTAGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: GVSLFQAAQLVSVSS*WPGLSQSLLGSLAS Trigger: AGAGGCTAAGCTGCCTAGAAGAGACTGAGATAGACCAGGCCACCAGGAAGAAACAGAGACCAGCTGAGCTGCTTGGAAGAGACTCACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR TCA 90 bp | ACATTTCCCAGCGATAGTTCATTGGTGTCCCACCACCTCTTCCTGTaGCCACAGCCAGGAGATAAGCATCACTTCTCTCTCCTGACACTT | + |
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Preference number: 1 (lower is better) Translates to: TFPSDSSLVSHHLFL*PQPGDKHHFSLLTL Trigger: AAGTGTCAGGAGAGAGAAGTGATGCTTATCTCCTGGCTGTGGTCACAGGAAGAGGTGGTGGGACACCAATGAACTATCGCTGGGAAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR GCA 90 bp | AAAGCTGAGTCTGAACATTTGGGTAACCTGGGTCAAACAGCCAACTaGTGCTCCATCGTTGTGCCAGGCTCCAGTGAGAAAACAAGAACA | + |
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Preference number: 1 (lower is better) Translates to: KAESEHLGNLGQTAN*CSIVVPGSSEKTRT Trigger: TGTTCTTGTTTTCTCACTGGAGCCTGGCACAACGATGGAGCAGCAGTTGGCTGTTTGACCCAGGTTACCCAAATGTTCAGACTCAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR GCA 90 bp | ATTTGGGTAACCTGGGTCAAACAGCCAACTGCTGCTCCATCGTTGTaGCAGGCTCCAGTGAGAAAACAAGAACATAGAGACATAAACAGA | + |
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Preference number: 1 (lower is better) Translates to: IWVTWVKQPTAAPSL*QAPVRKQEHRDINR Trigger: TCTGTTTATGTCTCTATGTTCTTGTTTTCTCACTGGAGCCTGGCACAACGATGGAGCAGCAGTTGGCTGTTTGACCCAGGTTACCCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR TCA 90 bp | ATAGTTGCATCACAAAGACCCTTCTGCAGTACAGGTGACACCTCATaGAAAATGGGAATTTGGGGTTCACAGCACAATTCTCAGCCATCT | + |
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Preference number: 1 (lower is better) Translates to: IVASQRPFCSTGDTS*KMGIWGSQHNSQPS Trigger: AGATGGCTGAGAATTGTGCTGTGAACCCCAAATTCCCATTTTTCATGAGGTGTCACCTGTACTGCAGAAGGGTCTTTGTGATGCAACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR TCA 90 bp | CTCTCTGATAGTGTCTCTCCAAGATGCTCACTGCTTATAGACATGTaGGGAGAGAGAGTTCTAGGAAAGCAGGTCAATTTTAGGGACTTC | + |
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Preference number: 1 (lower is better) Translates to: LSDSVSPRCSLLIDM*GERVLGKQVNFRDF Trigger: GAAGTCCCTAAAATTGACCTGCTTTCCTAGAACTCTCTCTCCTCACATGTCTATAAGCAGTGAGCATCTTGGAGAGACACTATCAGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215287.2 |
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| 3UTR TCA 90 bp | TGCCAGGCTCCAGTGAGAAAACAAGAACATAGAGACATAAACAGATaGATAAGTGACTTCCAGACTCCCCTACTCATCTGTTCTAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: CQAPVRKQEHRDINR*ISDFQTPLLICSSS Trigger: TGAGCTAGAACAGATGAGTAGGGGAGTCTGGAAGTCACTTATTCATCTGTTTATGTCTCTATGTTCTTGTTTTCTCACTGGAGCCTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR TCA 90 bp | TTGGGGTTCACAGCACAATTCTCAGCCATCTTAACAGATGAAATGTaGAAGAATCTCTCTTCCATGCAGCACAGTTGGTGTGAGTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: LGFTAQFSAILTDEM*KNLSSMQHSWCESL Trigger: AAGAGACTCACACCAACTGTGCTGCATGGAAGAGAGATTCTTTCACATTTCATCTGTTAAGATGGCTGAGAATTGTGCTGTGAACCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR TCA 90 bp | CACCAGAGCCATTCATTTGTAATATTCCTATTTCTTTGTGCTGAGTaGAGTAATCATAGGAAAGAGATTAGACCAACCAGACCTATCCAG | + |
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Preference number: 1 (lower is better) Translates to: HQSHSFVIFLFLCAE*SNHRKEIRPTRPIQ Trigger: CTGGATAGGTCTGGTTGGTCTAATCTCTTTCCTATGATTACTTCACTCAGCACAAAGAAATAGGAATATTACAAATGAATGGCTCTGGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR CCA 90 bp | CTCCTATGGCAAATCCTTGGTCACTGCAATCTGGGTAATCAATCCTaGAGTAAAAACACAACAGCTCTAAAATTGTATATTATATCAAAA | + |
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Preference number: 1 (lower is better) Translates to: LLWQILGHCNLGNQS*SKNTTALKLYIISK Trigger: TTTTGATATAATATACAATTTTAGAGCTGTTGTGTTTTTACTCCAGGATTGATTACCCAGATTGCAGTGACCAAGGATTTGCCATAGGAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGTTGGTGTGAGTCTCTTCCAAGCAGCTCAGCTGGTCTCTGTTTCTTCCTGCTCTCTCCTGACACTTaGAGATGGATGAAAATGGGG | + |
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Preference number: 2 (lower is better) Translates to: HSWCESLPSSSAGLCFFLLSPDT*RWMKMG Trigger: CCCCATTTTCATCCATCTTCAAGTGTCAGGAGAGAG...CAGGAAGAAACAGAGACCAGCTGAGCTGCTTGGAAGAGACTCACACCAACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGTTGGTGTGAGTCTCTTCCAAGCAGCTCAGCTGGTCTCTGTTTCTTCCTGTCTTTCTGGGCTGAATaGTGTTCACTGGTAGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: HSWCESLPSSSAGLCFFLSFWAE*CSLVEE Trigger: TTCCTCTACCAGTGAACAGCATTCAGCCCAGAAAGA...CAGGAAGAAACAGAGACCAGCTGAGCTGCTTGGAAGAGACTCACACCAACTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGTTGGTGTGAGTCTCTTCCAAGCAGCTCAGCTGGTCTCTGTTTCTTCCTGCATTGCATCTTCTTATaGACATTGCTCATTGACCAA | + |
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Preference number: 2 (lower is better) Translates to: HSWCESLPSSSAGLCFFLHCIFL*TLLIDQ Trigger: TTGGTCAATGAGCAATGTTCATAAGAAGATGCAATG...CAGGAAGAAACAGAGACCAGCTGAGCTGCTTGGAAGAGACTCACACCAACTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR-3UTR TCA 90 bp | GTACAGGTGACACCTCATGAAAAATGGGAATTTGGGGTTCACAGCACAATTCTCCTCTCTCCTGACACTTaGAGATGGATGAAAATGGGG | + |
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Preference number: 2 (lower is better) Translates to: VQVTPHEKWEFGVHSTILLSPDT*RWMKMG Trigger: CCCCATTTTCATCCATCTTCAAGTGTCAGGAGAGAG...GAGAATTGTGCTGTGAACCCCAAATTCCCATTTTTCATGAGGTGTCACCTGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAATGGCTCATATATAGTTGCATCACAAAGACCCTTCTGCAGTACAGGTGACGTCTCTGTTTCTTCCTaGTGGCCTGGTCTATCTCAG | + |
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Preference number: 2 (lower is better) Translates to: RNGSYIVASQRPFCSTGDVSVSS*WPGLSQ Trigger: CTGAGATAGACCAGGCCACCAGGAAGAAACAGAGAC...GTCACCTGTACTGCAGAAGGGTCTTTGTGATGCAACTATATATGAGCCATTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAATGGCTCATATATAGTTGCATCACAAAGACCCTTCTGCAGTACAGGTGACTGTGCCAGGCTCCAGTaGGAAAACAAGAACATAGAG | + |
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Preference number: 2 (lower is better) Translates to: RNGSYIVASQRPFCSTGDCARLQ*ENKNIE Trigger: CTCTATGTTCTTGTTTTCTCACTGGAGCCTGGCACA...GTCACCTGTACTGCAGAAGGGTCTTTGTGATGCAACTATATATGAGCCATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGTTCCTGATAAGGAACCAATGGCAGAACAAAGTAAGGATACTACTAAATCCTCCAAGCAGCTCAGCTaGTCTCTGTTTCTTCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LVPDKEPMAEQSKDTTKSSKQLS*SLFLPG Trigger: ACCAGGAAGAAACAGAGACCAGCTGAGCTGCTTGGA...GGATTTAGTAGTATCCTTACTTTGTTCTGCCATTGGTTCCTTATCAGGAACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGTTCCTGATAAGGAACCAATGGCAGAACAAAGTAAGGATACTACTAAATCCTGTGCCAGGCTCCAGTaGGAAAACAAGAACATAGAG | + |
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Preference number: 2 (lower is better) Translates to: LVPDKEPMAEQSKDTTKSCARLQ*ENKNIE Trigger: CTCTATGTTCTTGTTTTCTCACTGGAGCCTGGCACA...GGATTTAGTAGTATCCTTACTTTGTTCTGCCATTGGTTCCTTATCAGGAACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGATAAGGAACCAATGGCAGAACAAAGTAAGGATACTACTAAATCCAACTTGCTTCTGCAGTACAGGTaGCACCTCATGAAAAATGGG | + |
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Preference number: 2 (lower is better) Translates to: PDKEPMAEQSKDTTKSNLLLQYR*HLMKNG Trigger: CCCATTTTTCATGAGGTGTCACCTGTACTGCAGAAG...CAAGTTGGATTTAGTAGTATCCTTACTTTGTTCTGCCATTGGTTCCTTATCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGCCTCTCTGATAGTGTCTCTCCAAGATGCTCACACATTTCCCAGCGATAGTAGTTCCACAGATGGTTaGAATCTTAATGATAACCAC | + |
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Preference number: 2 (lower is better) Translates to: LASLIVSLQDAHTFPSDSSSTDG*NLNDNH Trigger: GTGGTTATCATTAAGATTGCAACCATCTGTGGAACT...ACTATCGCTGGGAAATGTGTGAGCATCTTGGAGAGACACTATCAGAGAGGCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213368.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAATGGCTCATATATAGTTGCATCACAAAGACCCTTCTGCAGTACAGGTGACCAAATCCTTGGTCACTaGAATCTGGGTAATCAATCC | + |
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Preference number: 2 (lower is better) Translates to: RNGSYIVASQRPFCSTGDQILGH*NLGNQS Trigger: GGATTGATTACCCAGATTGCAGTGACCAAGGATTTG...GTCACCTGTACTGCAGAAGGGTCTTTGTGATGCAACTATATATGAGCCATTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR-3UTR CCA 90 bp | GTACAGGTGACACCTCATGAAAAATGGGAATTTGGGGTTCACAGCACAATTCTCCTGGGTAATCAATCCTaGAGTAAAAACACAACAGCT | + |
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Preference number: 2 (lower is better) Translates to: VQVTPHEKWEFGVHSTILLGNQS*SKNTTA Trigger: AGCTGTTGTGTTTTTACTCCAGGATTGATTACCCAG...GAGAATTGTGCTGTGAACCCCAAATTCCCATTTTTCATGAGGTGTCACCTGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR CAA 90 bp | TGTTCTCAATTAGTCATTGCTCCCTTAAGCTACCTAGAACCTTACTaGGTTATCCTGAATCACAGATTGCTCCATCAAGGCTTAACTACC | + |
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Preference number: 2 (lower is better) Translates to: CSQLVIAPLSYLEPY*VILNHRLLHQGLTT Trigger: GGTAGTTAAGCCTTGATGGAGCAATCTGTGATTCAGGATAACCAAGTAAGGTTCTAGGTAGCTTAAGGGAGCAATGACTAATTGAGAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGTTCCTGATAAGGAACCAATGGCAGAACAAAGTAAGGATACTACTAAATCCTCTTTCTGGGCTGAATaGTGTTCACTGGTAGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LVPDKEPMAEQSKDTTKSSFWAE*CSLVEE Trigger: TTCCTCTACCAGTGAACAGCATTCAGCCCAGAAAGA...GGATTTAGTAGTATCCTTACTTTGTTCTGCCATTGGTTCCTTATCAGGAACAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGATAAGGAACCAATGGCAGAACAAAGTAAGGATACTACTAAATCCAACTTGTTTGGTCAACTCCTATaGCAAATCCTTGGTCACTGC | + |
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Preference number: 2 (lower is better) Translates to: PDKEPMAEQSKDTTKSNLFGQLL*QILGHC Trigger: GCAGTGACCAAGGATTTGCCATAGGAGTTGACCAAA...CAAGTTGGATTTAGTAGTATCCTTACTTTGTTCTGCCATTGGTTCCTTATCAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAATGGCTCATATATAGTTGCATCACAAAGACCCTTCTGCAGTACAGGTGACAGAGACATAAACAGATaGATAAGTGACTTCCAGACT | + |
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Preference number: 2 (lower is better) Translates to: RNGSYIVASQRPFCSTGDRDINR*ISDFQT Trigger: AGTCTGGAAGTCACTTATTCATCTGTTTATGTCTCT...GTCACCTGTACTGCAGAAGGGTCTTTGTGATGCAACTATATATGAGCCATTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAATGGCTCATATATAGTTGCATCACAAAGACCCTTCTGCAGTACAGGTGACCTAATTAGTCTGCTTTaGTCAACTCCTATGGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: RNGSYIVASQRPFCSTGDLISLL*STPMAN Trigger: ATTTGCCATAGGAGTTGACCAAAGCAGACTAATTAG...GTCACCTGTACTGCAGAAGGGTCTTTGTGATGCAACTATATATGAGCCATTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAATGGCTCATATATAGTTGCATCACAAAGACCCTTCTGCAGTACAGGTGACCTTATCAAATTGCATTaGATGTCTAAAGGCAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: RNGSYIVASQRPFCSTGDLIKLH*MSKGKV Trigger: CACCTTGCCTTTAGACATCCAATGCAATTTGATAAG...GTCACCTGTACTGCAGAAGGGTCTTTGTGATGCAACTATATATGAGCCATTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215287.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGTTCCTGATAAGGAACCAATGGCAGAACAAAGTAAGGATACTACTAAATCCCACTTCAGTGCACTATaGTGTCATAAATCCAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: LVPDKEPMAEQSKDTTKSHFSAL*CHKSRF Trigger: AAACCTGGATTTATGACAGCATAGTGCACTGAAGTG...GGATTTAGTAGTATCCTTACTTTGTTCTGCCATTGGTTCCTTATCAGGAACAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR CAA 90 bp | TTCACATTCACTGTCTTGATAAACACTAAGCCTTTGGAAGTCCTATaGCAAAGATTCATGTTGTTGAGTTCCACAGATGGTTGCAATCTT | + |
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Preference number: 2 (lower is better) Translates to: FTFTVLINTKPLEVL*QRFMLLSSTDGCNL Trigger: AAGATTGCAACCATCTGTGGAACTCAACAACATGAATCTTTGCAATAGGACTTCCAAAGGCTTAGTGTTTATCAAGACAGTGAATGTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAATCTGGGTAATCAATCCTGGAGTAAAAACACAACAGCTCTAAAATTGTATAAAACTTCATCTCACTaGGCAAATAGGAGGGCAACA | + |
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Preference number: 2 (lower is better) Translates to: CNLGNQSWSKNTTALKLYKTSSH*ANRRAT Trigger: TGTTGCCCTCCTATTTGCTCAGTGAGATGAAGTTTT...ATACAATTTTAGAGCTGTTGTGTTTTTACTCCAGGATTGATTACCCAGATTGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR CAA 90 bp | ATAAACACTAAGCCTTTGGAAGTCCTATTGCAAAGATTCATGTTGTaGAGTTCCACAGATGGTTGCAATCTTAATGATAACCACATAACA | + |
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Preference number: 2 (lower is better) Translates to: INTKPLEVLLQRFML*SSTDGCNLNDNHIT Trigger: TGTTATGTGGTTATCATTAAGATTGCAACCATCTGTGGAACTCAACAACATGAATCTTTGCAATAGGACTTCCAAAGGCTTAGTGTTTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR CAA 90 bp | TTGATAAACACTAAGCCTTTGGAAGTCCTATTGCAAAGATTCATGTaGTTGAGTTCCACAGATGGTTGCAATCTTAATGATAACCACATA | + |
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Preference number: 2 (lower is better) Translates to: LINTKPLEVLLQRFM*LSSTDGCNLNDNHI Trigger: TATGTGGTTATCATTAAGATTGCAACCATCTGTGGAACTCAACAACATGAATCTTTGCAATAGGACTTCCAAAGGCTTAGTGTTTATCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR CCA 72 bp | AGCAGCTCAGCTGGTCTCTGTTTCTTCCTGGTGGCCTaGTCTATCTCAGTCTCTTCTAGGCAGCTTAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: SSSAGLCFFLVA*SISVSSRQLSL Trigger: GAGGCTAAGCTGCCTAGAAGAGACTGAGATAGACCAGGCCACCAGGAAGAAACAGAGACCAGCTGAGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR CCA 72 bp | CAGGCAGGAAAGCTGAGTCTGAACATTTGGGTAACCTaGGTCAAACAGCCAACTGCTGCTCCATCGTTGTGC | + |
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Preference number: 3 (lower is better) Translates to: QAGKLSLNIWVT*VKQPTAAPSLC Trigger: GCACAACGATGGAGCAGCAGTTGGCTGTTTGACCCAGGTTACCCAAATGTTCAGACTCAGCTTTCCTGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR TCA 72 bp | AGCGATAGTTCATTGGTGTCCCACCACCTCTTCCTGTaGCCACAGCCAGGAGATAAGCATCACTTCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: SDSSLVSHHLFL*PQPGDKHHFSL Trigger: GAGAGAGAAGTGATGCTTATCTCCTGGCTGTGGTCACAGGAAGAGGTGGTGGGACACCAATGAACTATCGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR GCA 72 bp | ACCTGGGTCAAACAGCCAACTGCTGCTCCATCGTTGTaGCAGGCTCCAGTGAGAAAACAAGAACATAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: TWVKQPTAAPSL*QAPVRKQEHRD Trigger: GTCTCTATGTTCTTGTTTTCTCACTGGAGCCTGGCACAACGATGGAGCAGCAGTTGGCTGTTTGACCCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR GCA 72 bp | GAACATTTGGGTAACCTGGGTCAAACAGCCAACTGCTaGTCCATCGTTGTGCCAGGCTCCAGTGAGAAAACA | + |
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Preference number: 3 (lower is better) Translates to: EHLGNLGQTANC*SIVVPGSSEKT Trigger: TGTTTTCTCACTGGAGCCTGGCACAACGATGGAGCAGCAGTTGGCTGTTTGACCCAGGTTACCCAAATGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR GCA 72 bp | TCTGAACATTTGGGTAACCTGGGTCAAACAGCCAACTaGTGCTCCATCGTTGTGCCAGGCTCCAGTGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: SEHLGNLGQTAN*CSIVVPGSSEK Trigger: TTTCTCACTGGAGCCTGGCACAACGATGGAGCAGCAGTTGGCTGTTTGACCCAGGTTACCCAAATGTTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR-3UTR CAA 90 bp | CACAGTTGGTGTGAGTCTCTTCCAAGCAGCTCAGCTGGTCTCTGTTTCTTCCTGTCCTATGGCAAATCCTaGGTCACTGCAATCTGGGTA | + |
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Preference number: 3 (lower is better) Translates to: HSWCESLPSSSAGLCFFLSYGKS*VTAIWV Trigger: TACCCAGATTGCAGTGACCAAGGATTTGCCATAGGA...CAGGAAGAAACAGAGACCAGCTGAGCTGCTTGGAAGAGACTCACACCAACTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR TCA 72 bp | GTGAAAGAATCTCTCTTCCATGCAGCACAGTTGGTGTaGGTCTCTTCCAAGCAGCTCAGCTGGTCTCTGTTT | + |
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Preference number: 3 (lower is better) Translates to: VKESLFHAAQLV*VSSKQLSWSLF Trigger: AAACAGAGACCAGCTGAGCTGCTTGGAAGAGACTCACACCAACTGTGCTGCATGGAAGAGAGATTCTTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR-3UTR CAA 90 bp | CACAGTTGGTGTGAGTCTCTTCCAAGCAGCTCAGCTGGTCTCTGTTTCTTCCTGTCACTGGTAGAGGAATaGGCTGGTATCCATGAAAAT | + |
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Preference number: 3 (lower is better) Translates to: HSWCESLPSSSAGLCFFLSLVEE*AGIHEN Trigger: ATTTTCATGGATACCAGCCAATTCCTCTACCAGTGA...CAGGAAGAAACAGAGACCAGCTGAGCTGCTTGGAAGAGACTCACACCAACTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR GCA 72 bp | ACCCACTTCCACACTGCATATCACTTCAGTGCACTATaGTGTCATAAATCCAGGTTTCAGCTTCCAAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: THFHTAYHFSAL*CHKSRFQLPRC Trigger: ACACCTTGGAAGCTGAAACCTGGATTTATGACAGCATAGTGCACTGAAGTGATATGCAGTGTGGAAGTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR TCA 72 bp | GGGGTTCACAGCACAATTCTCAGCCATCTTAACAGATaGAATGTGAAAGAATCTCTCTTCCATGCAGCACAG | + |
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Preference number: 3 (lower is better) Translates to: GVHSTILSHLNR*NVKESLFHAAQ Trigger: CTGTGCTGCATGGAAGAGAGATTCTTTCACATTTCATCTGTTAAGATGGCTGAGAATTGTGCTGTGAACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR CCA 72 bp | GCTGTTTCCCCAACATCTATGCTAATTAGTCTGCTTTaGTCAACTCCTATGGCAAATCCTTGGTCACTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: AVSPTSMLISLL*STPMANPWSLQ Trigger: TTGCAGTGACCAAGGATTTGCCATAGGAGTTGACCAAAGCAGACTAATTAGCATAGATGTTGGGGAAACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAAATAGGAGGGCAACAAGCCCACCAGAGCCATTCATTTGTAATATTCCTATTAAAAATAACCAGACCTaGAGCCCCTCATGGCAACAT | + |
|
Preference number: 3 (lower is better) Translates to: ANRRATSPPEPFICNIPIKNNQT*SPSWQH Trigger: ATGTTGCCATGAGGGGCTCAAGGTCTGGTTATTTTT...AATAGGAATATTACAAATGAATGGCTCTGGTGGGCTTGTTGCCCTCCTATTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTGATAGTGTCTCTCCAAGATGCTCACACATTTCCCAGCGATAGTTCATTGCAAAGATTCATGTTGTaGAGTTCCACAGATGGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SLIVSLQDAHTFPSDSSLQRFML*SSTDGC Trigger: GCAACCATCTGTGGAACTCAACAACATGAATCTTTG...CAATGAACTATCGCTGGGAAATGTGTGAGCATCTTGGAGAGACACTATCAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213368.2 |
||
| 3UTR TCA 72 bp | TATAGTTGCATCACAAAGACCCTTCTGCAGTACAGGTaGCACCTCATGAAAAATGGGAATTTGGGGTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: YSCITKTLLQYR*HLMKNGNLGFT Trigger: TGTGAACCCCAAATTCCCATTTTTCATGAGGTGTCACCTGTACTGCAGAAGGGTCTTTGTGATGCAACTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| 3UTR TCA 72 bp | AGTGTCTCTCCAAGATGCTCACTGCTTATAGACATGTaGGGAGAGAGAGTTCTAGGAAAGCAGGTCAATTTT | + |
|
Preference number: 3 (lower is better) Translates to: SVSPRCSLLIDM*GERVLGKQVNF Trigger: AAAATTGACCTGCTTTCCTAGAACTCTCTCTCCTCACATGTCTATAAGCAGTGAGCATCTTGGAGAGACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215287.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAGCCTCTCTGATAGTGTCTCTCCAAGATGCTCACACATTTCCCAGCGATAGTTTCACATTCACTGTCTaGATAAACACTAAGCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LASLIVSLQDAHTFPSDSFTFTV*INTKPL Trigger: CAAAGGCTTAGTGTTTATCAAGACAGTGAATGTGAA...ACTATCGCTGGGAAATGTGTGAGCATCTTGGAGAGACACTATCAGAGAGGCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213368.2 |
||
| 3UTR CCA 72 bp | AGAACACCATGTGTCTTAAGGAGCTTCCCTCCAAAGTaGAAAGTTTTCATAGAAGAGGAAGTTGCTAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: RTPCVLRSFPPK*KVFIEEEVAKP Trigger: TGGTTTAGCAACTTCCTCTTCTATGAAAACTTTCCACTTTGGAGGGAAGCTCCTTAAGACACATGGTGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215287.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAATGGCTCATATATAGTTGCATCACAAAGACCCTTCTGCAGTACAGGTGACATGAAAAATGGGAATTaGGGGTTCACAGCACAATTC | + |
|
Preference number: 3 (lower is better) Translates to: RNGSYIVASQRPFCSTGDMKNGN*GFTAQF Trigger: GAATTGTGCTGTGAACCCCAAATTCCCATTTTTCAT...GTCACCTGTACTGCAGAAGGGTCTTTGTGATGCAACTATATATGAGCCATTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| 3UTR TCA 72 bp | TTAATTGGAGTTACTTCAAGGAGCATGGATAAGGAATaGCAGAACCAGAAATGGCTCATATATAGTTGCATC | + |
|
Preference number: 3 (lower is better) Translates to: LIGVTSRSMDKE*QNQKWLIYSCI Trigger: GATGCAACTATATATGAGCCATTTCTGGTTCTGTCATTCCTTATCCATGCTCCTTGAAGTAACTCCAATTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| 3UTR CCA 72 bp | CAAATCCTTGGTCACTGCAATCTGGGTAATCAATCCTaGAGTAAAAACACAACAGCTCTAAAATTGTATATT | + |
|
Preference number: 3 (lower is better) Translates to: QILGHCNLGNQS*SKNTTALKLYI Trigger: AATATACAATTTTAGAGCTGTTGTGTTTTTACTCCAGGATTGATTACCCAGATTGCAGTGACCAAGGATTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| 3UTR GCA 72 bp | GCTTTGATAAATAAATGCATGTTCTCAATTAGTCATTaGTCCCTTAAGCTACCTAGAACCTTACTTGGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: ALINKCMFSISH*SLKLPRTLLGY Trigger: ATAACCAAGTAAGGTTCTAGGTAGCTTAAGGGAGCAATGACTAATTGAGAACATGCATTTATTTATCAAAGC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| 3UTR CAA 72 bp | ATAAGAGAAACAGGCAGGAAAGCTGAGTCTGAACATTaGGGTAACCTGGGTCAAACAGCCAACTGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IRETGRKAESEH*GNLGQTANCCS Trigger: GGAGCAGCAGTTGGCTGTTTGACCCAGGTTACCCAAATGTTCAGACTCAGCTTTCCTGCCTGTTTCTCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR TCA 90 bp | CACAGTTGGTGTGAGTCTCTTCCAAGCAGCTCAGCTGGTCTCTGTTTCTTCCTGGTCATATGCCATGGCTaGCAGAATAAAAGACTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSWCESLPSSSAGLCFFLVICHG*QNKRLR Trigger: TCTGAGTCTTTTATTCTGTCAGCCATGGCATATGAC...CAGGAAGAAACAGAGACCAGCTGAGCTGCTTGGAAGAGACTCACACCAACTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR TCA 90 bp | GCAAATAGGAGGGCAACAAGCCCACCAGAGCCATTCATTTGTAATATTCCTATTGTGGCTGGAGATACATaGAAGCCCCAGAACCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ANRRATSPPEPFICNIPIVAGDT*KPQNQR Trigger: TCTTTGGTTCTGGGGCTTTCATGTATCTCCAGCCAC...AATAGGAATATTACAAATGAATGGCTCTGGTGGGCTTGTTGCCCTCCTATTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR CCA 90 bp | CATGGCAACATTGCATCTTCTTATGAACATTGCTCATTGACCAATCATACCACTGCCTTGCCATGGATATaGTGTGGGCCATGGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HGNIASSYEHCSLTNHTTALPWI*CGPWLQ Trigger: TTGGAGCCATGGCCCACACCATATCCATGGCAAGGC...AGTGGTATGATTGGTCAATGAGCAATGTTCATAAGAAGATGCAATGTTGCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR CCA 90 bp | GGCAACATTGCATCTTCTTATGAACATTGCTCATTGACCAATCATACCACTAGAGCCTTGCCATGGATATaGTGTGGGCCATGGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GNIASSYEHCSLTNHTTRALPWI*CGPWLQ Trigger: TTGGAGCCATGGCCCACACCATATCCATGGCAAGGC...TCTAGTGGTATGATTGGTCAATGAGCAATGTTCATAAGAAGATGCAATGTTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR CCA 90 bp | TCTTATGAACATTGCTCATTGACCAATCATACCACTAGAGCTCATAACACAGCTGCCTTGCCATGGATATaGTGTGGGCCATGGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SYEHCSLTNHTTRAHNTAALPWI*CGPWLQ Trigger: TTGGAGCCATGGCCCACACCATATCCATGGCAAGGC...AGCTGTGTTATGAGCTCTAGTGGTATGATTGGTCAATGAGCAATGTTCATAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR GCA 90 bp | TCTTATGAACATTGCTCATTGACCAATCATACCACTAGAGCTCATAACACAGCTACAGAAGGTCAGCCTTaGCATGGATATGGTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SYEHCSLTNHTTRAHNTATEGQP*HGYGVG Trigger: GCCCACACCATATCCATGGCAAGGCTGACCTTCTGT...AGCTGTGTTATGAGCTCTAGTGGTATGATTGGTCAATGAGCAATGTTCATAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR GCA 90 bp | CTTGTTCCTGATAAGGAACCAATGGCAGAACAAAGTAAGGATACTACTAAATCCACAGAAGGTCAGCCTTaGCATGGATATGGTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVPDKEPMAEQSKDTTKSTEGQP*HGYGVG Trigger: GCCCACACCATATCCATGGCAAGGCTGACCTTCTGT...GGATTTAGTAGTATCCTTACTTTGTTCTGCCATTGGTTCCTTATCAGGAACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR CCA 90 bp | ATAGGAGGGCAACAAGCCCACCAGAGCCATTCATTTGTAATATTCCTATTTCTTGCCATGGATATGGTGTaGGCCATGGCTCCAACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IGGQQAHQSHSFVIFLFLAMDMV*AMAPTK Trigger: TTTTGTTGGAGCCATGGCCCACACCATATCCATGGC...AAGAAATAGGAATATTACAAATGAATGGCTCTGGTGGGCTTGTTGCCCTCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR CCA 90 bp | GTACAGGTGACACCTCATGAAAAATGGGAATTTGGGGTTCACAGCACAATTCTCGGACAAAACAGAAGGTaGCTGGAGATACATGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VQVTPHEKWEFGVHSTILGQNRR*LEIHES Trigger: GCTTTCATGTATCTCCAGCCACCTTCTGTTTTGTCC...GAGAATTGTGCTGTGAACCCCAAATTCCCATTTTTCATGAGGTGTCACCTGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR TCA 90 bp | GGCAACATTGCATCTTCTTATGAACATTGCTCATTGACCAATCATACCACTAGAGTGGCTGGAGATACATaGAAGCCCCAGAACCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GNIASSYEHCSLTNHTTRVAGDT*KPQNQR Trigger: TCTTTGGTTCTGGGGCTTTCATGTATCTCCAGCCAC...TCTAGTGGTATGATTGGTCAATGAGCAATGTTCATAAGAAGATGCAATGTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR GCA 90 bp | CATGGCAACATTGCATCTTCTTATGAACATTGCTCATTGACCAATCATACCACTGTGCTAGTACAGGAGTaGTCCAGAAGGGGAAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: HGNIASSYEHCSLTNHTTVLVQE*SRRGRI Trigger: TATCCTTCCCCTTCTGGAGCACTCCTGTACTAGCAC...AGTGGTATGATTGGTCAATGAGCAATGTTCATAAGAAGATGCAATGTTGCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| 3UTR CAA 72 bp | TTAGTCATTGCTCCCTTAAGCTACCTAGAACCTTACTaGGTTATCCTGAATCACAGATTGCTCCATCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVIAPLSYLEPY*VILNHRLLHQG Trigger: GCCTTGATGGAGCAATCTGTGATTCAGGATAACCAAGTAAGGTTCTAGGTAGCTTAAGGGAGCAATGACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR GCA 90 bp | TGCAATCTGGGTAATCAATCCTGGAGTAAAAACACAACAGCTCTAAAATTGTATACAGAAGGTCAGCCTTaGCATGGATATGGTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CNLGNQSWSKNTTALKLYTEGQP*HGYGVG Trigger: GCCCACACCATATCCATGGCAAGGCTGACCTTCTGT...ATACAATTTTAGAGCTGTTGTGTTTTTACTCCAGGATTGATTACCCAGATTGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR GCA 90 bp | ACACAAGGCAAACTGGAATCCAACCACCTAGATTTGAATGTATTTGTGAAATCAGTGCTAGTACAGGAGTaGTCCAGAAGGGGAAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: TQGKLESNHLDLNVFVKSVLVQE*SRRGRI Trigger: TATCCTTCCCCTTCTGGAGCACTCCTGTACTAGCAC...TGATTTCACAAATACATTCAAATCTAGGTGGTTGGATTCCAGTTTGCCTTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCTTATGAACATTGCTCATTGACCAATCATACCACTAGAGCTCATAACACAGCCATGGATATGGTGTaGGCCATGGCTCCAACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSYEHCSLTNHTTRAHNTAMDMV*AMAPTK Trigger: TTTTGTTGGAGCCATGGCCCACACCATATCCATGGC...TGTGTTATGAGCTCTAGTGGTATGATTGGTCAATGAGCAATGTTCATAAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR TCA 90 bp | CCTCATGGCAACATTGCATCTTCTTATGAACATTGCTCATTGACCAATCATACCGTCATATGCCATGGCTaGCAGAATAAAAGACTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PHGNIASSYEHCSLTNHTVICHG*QNKRLR Trigger: TCTGAGTCTTTTATTCTGTCAGCCATGGCATATGAC...GGTATGATTGGTCAATGAGCAATGTTCATAAGAAGATGCAATGTTGCCATGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTTCCTGATAAGGAACCAATGGCAGAACAAAGTAAGGATACTACTAAATCCAAAACAGAAGGTGGCTaGAGATACATGAAAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVPDKEPMAEQSKDTTKSKTEGG*RYMKAP Trigger: TGGGGCTTTCATGTATCTCCAGCCACCTTCTGTTTT...GGATTTAGTAGTATCCTTACTTTGTTCTGCCATTGGTTCCTTATCAGGAACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR CCA 90 bp | TCTTATGAACATTGCTCATTGACCAATCATACCACTAGAGCTCATAACACAGCTAAAACAGAAGGTGGCTaGAGATACATGAAAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SYEHCSLTNHTTRAHNTAKTEGG*RYMKAP Trigger: TGGGGCTTTCATGTATCTCCAGCCACCTTCTGTTTT...AGCTGTGTTATGAGCTCTAGTGGTATGATTGGTCAATGAGCAATGTTCATAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR TCA 90 bp | GGCAACATTGCATCTTCTTATGAACATTGCTCATTGACCAATCATACCACTAGAGTCATATGCCATGGCTaGCAGAATAAAAGACTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GNIASSYEHCSLTNHTTRVICHG*QNKRLR Trigger: TCTGAGTCTTTTATTCTGTCAGCCATGGCATATGAC...TCTAGTGGTATGATTGGTCAATGAGCAATGTTCATAAGAAGATGCAATGTTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR TCA 90 bp | CATGGCAACATTGCATCTTCTTATGAACATTGCTCATTGACCAATCATACCACTCACACATATAGTGGTTaGCAATGTTGTCAGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HGNIASSYEHCSLTNHTTHTYSG*QCCQHR Trigger: TCTGTGCTGACAACATTGTCAACCACTATATGTGTG...AGTGGTATGATTGGTCAATGAGCAATGTTCATAAGAAGATGCAATGTTGCCATG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR TCA 90 bp | GGCAACATTGCATCTTCTTATGAACATTGCTCATTGACCAATCATACCACTAGACACACATATAGTGGTTaGCAATGTTGTCAGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GNIASSYEHCSLTNHTTRHTYSG*QCCQHR Trigger: TCTGTGCTGACAACATTGTCAACCACTATATGTGTG...TCTAGTGGTATGATTGGTCAATGAGCAATGTTCATAAGAAGATGCAATGTTGCC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCTTATGAACATTGCTCATTGACCAATCATACCACTAGAGCTCATAACACAAAAACAGAAGGTGGCTaGAGATACATGAAAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSYEHCSLTNHTTRAHNTKTEGG*RYMKAP Trigger: TGGGGCTTTCATGTATCTCCAGCCACCTTCTGTTTT...TGTGTTATGAGCTCTAGTGGTATGATTGGTCAATGAGCAATGTTCATAAGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR CCA 90 bp | AACATTGCATCTTCTTATGAACATTGCTCATTGACCAATCATACCACTAGAGCTGGACAAAACAGAAGGTaGCTGGAGATACATGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NIASSYEHCSLTNHTTRAGQNRR*LEIHES Trigger: GCTTTCATGTATCTCCAGCCACCTTCTGTTTTGTCC...AGCTCTAGTGGTATGATTGGTCAATGAGCAATGTTCATAAGAAGATGCAATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTTCCTGATAAGGAACCAATGGCAGAACAAAGTAAGGATACTACTAAATCCGAAGACACCTTTCCTTaGTCAAGGGACAAAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVPDKEPMAEQSKDTTKSEDTFP*SRDKTE Trigger: TTCTGTTTTGTCCCTTGACCAAGGAAAGGTGTCTTC...GGATTTAGTAGTATCCTTACTTTGTTCTGCCATTGGTTCCTTATCAGGAACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| 3UTR CAA 72 bp | CATGGCAACATTGCATCTTCTTATGAACATTGCTCATaGACCAATCATACCACTAGAGCTCATAACACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HGNIASSYEHCS*TNHTTRAHNTA Trigger: AGCTGTGTTATGAGCTCTAGTGGTATGATTGGTCAATGAGCAATGTTCATAAGAAGATGCAATGTTGCCATG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR CCA 90 bp | CCTCATGGCAACATTGCATCTTCTTATGAACATTGCTCATTGACCAATCATACCACTCATCAGCATTTTTaGGGAGATAGTAGAGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: PHGNIASSYEHCSLTNHTTHQHF*GDSRGI Trigger: TATTCCTCTACTATCTCCCCAAAAATGCTGATGAGT...GGTATGATTGGTCAATGAGCAATGTTCATAAGAAGATGCAATGTTGCCATGAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR CCA 90 bp | TGCAATCTGGGTAATCAATCCTGGAGTAAAAACACAACAGCTCTAAAATTGTATGGACAAAACAGAAGGTaGCTGGAGATACATGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CNLGNQSWSKNTTALKLYGQNRR*LEIHES Trigger: GCTTTCATGTATCTCCAGCCACCTTCTGTTTTGTCC...ATACAATTTTAGAGCTGTTGTGTTTTTACTCCAGGATTGATTACCCAGATTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR CCA 90 bp | ATTGCATCTTCTTATGAACATTGCTCATTGACCAATCATACCACTAGAGCTCATGAAGACACCTTTCCTTaGTCAAGGGACAAAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IASSYEHCSLTNHTTRAHEDTFP*SRDKTE Trigger: TTCTGTTTTGTCCCTTGACCAAGGAAAGGTGTCTTC...ATGAGCTCTAGTGGTATGATTGGTCAATGAGCAATGTTCATAAGAAGATGCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCTTATGAACATTGCTCATTGACCAATCATACCACTAGAGCTCATAACACAGAAGACACCTTTCCTTaGTCAAGGGACAAAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSYEHCSLTNHTTRAHNTEDTFP*SRDKTE Trigger: TTCTGTTTTGTCCCTTGACCAAGGAAAGGTGTCTTC...TGTGTTATGAGCTCTAGTGGTATGATTGGTCAATGAGCAATGTTCATAAGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR CCA 90 bp | TCTTATGAACATTGCTCATTGACCAATCATACCACTAGAGCTCATAACACAGCTACTCATCAGCATTTTTaGGGAGATAGTAGAGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: SYEHCSLTNHTTRAHNTATHQHF*GDSRGI Trigger: TATTCCTCTACTATCTCCCCAAAAATGCTGATGAGT...AGCTGTGTTATGAGCTCTAGTGGTATGATTGGTCAATGAGCAATGTTCATAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| CDS-3UTR CCA 90 bp | CCTGATAAGGAACCAATGGCAGAACAAAGTAAGGATACTACTAAATCCAACTTGACTCATCAGCATTTTTaGGGAGATAGTAGAGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: PDKEPMAEQSKDTTKSNLTHQHF*GDSRGI Trigger: TATTCCTCTACTATCTCCCCAAAAATGCTGATGAGT...CAAGTTGGATTTAGTAGTATCCTTACTTTGTTCTGCCATTGGTTCCTTATCAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| 3UTR CAA 72 bp | AAGCCTTTGGAAGTCCTATTGCAAAGATTCATGTTGTaGAGTTCCACAGATGGTTGCAATCTTAATGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: KPLEVLLQRFML*SSTDGCNLNDN Trigger: GTTATCATTAAGATTGCAACCATCTGTGGAACTCAACAACATGAATCTTTGCAATAGGACTTCCAAAGGCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
||
| 3UTR CAA 72 bp | ACTAAGCCTTTGGAAGTCCTATTGCAAAGATTCATGTaGTTGAGTTCCACAGATGGTTGCAATCTTAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: TKPLEVLLQRFM*LSSTDGCNLND Trigger: ATCATTAAGATTGCAACCATCTGTGGAACTCAACAACATGAATCTTTGCAATAGGACTTCCAAAGGCTTAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR CAA 72 bp | ACCTTCACATTCACTGTCTTGATAAACACTAAGCCTTaGGAAGTCCTATTGCAAAGATTCATGTTGTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: TFTFTVLINTKP*EVLLQRFMLLS Trigger: ACTCAACAACATGAATCTTTGCAATAGGACTTCCAAAGGCTTAGTGTTTATCAAGACAGTGAATGTGAAGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| 3UTR CAA 72 bp | CACACTCATATCCTTAACCTGATTACACATTGTTTGTaGAGTGACTCACTACCAAGAGAATTTGAACCATGT | + |
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Preference number: 4 (lower is better) Translates to: HTHILNLITHCL*SDSLPREFEPC Trigger: ACATGGTTCAAATTCTCTTGGTAGTGAGTCACTCAACAAACAATGTGTAATCAGGTTAAGGATATGAGTGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215287.2 |
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| 3UTR CAA 72 bp | ACAGCCATAAATGGGCATCTCATCCCTAATCAGTACTaGGCATTGTCAGTATCTTTAACTTATCAAATTGCA | + |
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Preference number: 4 (lower is better) Translates to: TAINGHLIPNQY*ALSVSLTYQIA Trigger: TGCAATTTGATAAGTTAAAGATACTGACAATGCCAAGTACTGATTAGGGATGAGATGCCCATTTATGGCTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215287.2 |
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| 3UTR CAA 72 bp | ATTCACACTCATATCCTTAACCTGATTACACATTGTTaGTTGAGTGACTCACTACCAAGAGAATTTGAACCA | + |
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Preference number: 4 (lower is better) Translates to: IHTHILNLITHC*LSDSLPREFEP Trigger: TGGTTCAAATTCTCTTGGTAGTGAGTCACTCAACAAACAATGTGTAATCAGGTTAAGGATATGAGTGTGAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215287.2 |
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| CDS-3UTR CAA 90 bp | GAGTTACTTCAAGGAGCATGGATAAGGAATGACAGAACCAGAAATGGCTCATATCACAGAAGGTCAGCCTaGCCATGGATATGGTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: ELLQGAWIRNDRTRNGSYHRRSA*PWIWCG Trigger: CCCACACCATATCCATGGCAAGGCTGACCTTCTGTG...ATATGAGCCATTTCTGGTTCTGTCATTCCTTATCCATGCTCCTTGAAGTAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| CDS-3UTR CAA 90 bp | ATTGCATCTTCTTATGAACATTGCTCATTGACCAATCATACCACTAGAGCTCATCACAGAAGGTCAGCCTaGCCATGGATATGGTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: IASSYEHCSLTNHTTRAHHRRSA*PWIWCG Trigger: CCCACACCATATCCATGGCAAGGCTGACCTTCTGTG...ATGAGCTCTAGTGGTATGATTGGTCAATGAGCAATGTTCATAAGAAGATGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| CDS-3UTR CAA 90 bp | AACATTGCATCTTCTTATGAACATTGCTCATTGACCAATCATACCACTAGAGCTCACAGAAGGTCAGCCTaGCCATGGATATGGTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: NIASSYEHCSLTNHTTRAHRRSA*PWIWCG Trigger: CCCACACCATATCCATGGCAAGGCTGACCTTCTGTG...AGCTCTAGTGGTATGATTGGTCAATGAGCAATGTTCATAAGAAGATGCAATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| CDS-3UTR CAA 90 bp | GGAAGTCCTATTGCAAAGATTCATGTTGTTGAGTTCCACAGATGGTTGCAATCTGGAAGACACCTTTCCTaGGTCAAGGGACAAAACAGA | + |
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Preference number: 5 (lower is better) Translates to: GSPIAKIHVVEFHRWLQSGRHLS*VKGQNR Trigger: TCTGTTTTGTCCCTTGACCAAGGAAAGGTGTCTTCC...AGATTGCAACCATCTGTGGAACTCAACAACATGAATCTTTGCAATAGGACTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213368.2 ENSMUST00000215287.2 |
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| CDS-3UTR CAA 90 bp | TCTTATGAACATTGCTCATTGACCAATCATACCACTAGAGCTCATAACACAGCTGGAAGACACCTTTCCTaGGTCAAGGGACAAAACAGA | + |
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Preference number: 5 (lower is better) Translates to: SYEHCSLTNHTTRAHNTAGRHLS*VKGQNR Trigger: TCTGTTTTGTCCCTTGACCAAGGAAAGGTGTCTTCC...AGCTGTGTTATGAGCTCTAGTGGTATGATTGGTCAATGAGCAATGTTCATAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086064.3 ENSMUST00000213368.2 ENSMUST00000215287.2 |
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