RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR875 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000058628

Ensembl transcript IDs: ENSMUST00000215128.2

Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CTCAAATGTAAGGATTTGAAACCCTGTTTCTGGGCTGCATGTAATTTGTTGGATACAGATCTTTCCATATaGACACTGCTCACTGACCAG +
Preference number: 2 (lower is better)
Translates to: LKCKDLKPCFWAACNLLDTDLSI*TLLTDQ
Trigger: CTGGTCAGTGAGCAGTGTTCATATGGAAAGATCTGT...ATCCAACAAATTACATGCAGCCCAGAAACAGGGTTTCAAATCCTTACATTTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
3UTR CAA 90 bp TTTTGGCAGAGTAAGAGTCAGGAAGAACAAAGCTGTGTTAAAATGTaGCTCAAATGTAAGGATTTGAAACCCTGTTTCTGGGCTGCATGT +
Preference number: 2 (lower is better)
Translates to: FWQSKSQEEQSCVKM*LKCKDLKPCFWAAC
Trigger: ACATGCAGCCCAGAAACAGGGTTTCAAATCCTTACATTTGAGCAACATTTTAACACAGCTTTGTTCTTCCTGACTCTTACTCTGCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
3UTR CAA 90 bp AAATGTAAGGATTTGAAACCCTGTTTCTGGGCTGCATGTAATTTGTaGGATAAACAATTACCCAGTATCCATGACGACCTAGTTTCTCCA +
Preference number: 2 (lower is better)
Translates to: KCKDLKPCFWAACNL*DKQLPSIHDDLVSP
Trigger: TGGAGAAACTAGGTCGTCATGGATACTGGGTAATTGTTTATCCAACAAATTACATGCAGCCCAGAAACAGGGTTTCAAATCCTTACATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
3UTR CAA 90 bp CTCAAATGTAAGGATTTGAAACCCTGTTTCTGGGCTGCATGTAATTaGTTGGATAAACAATTACCCAGTATCCATGACGACCTAGTTTCT +
Preference number: 2 (lower is better)
Translates to: LKCKDLKPCFWAACN*LDKQLPSIHDDLVS
Trigger: AGAAACTAGGTCGTCATGGATACTGGGTAATTGTTTATCCAACAAATTACATGCAGCCCAGAAACAGGGTTTCAAATCCTTACATTTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
3UTR TCA 72 bp ATTGCATCTTCTTATCCAAATACAGATCTTTCCATATaGACACTGCTCACTGACCAGTCACACCACTGTAGC +
Preference number: 3 (lower is better)
Translates to: IASSYPNTDLSI*TLLTDQSHHCS
Trigger: GCTACAGTGGTGTGACTGGTCAGTGAGCAGTGTTCATATGGAAAGATCTGTATTTGGATAAGAAGATGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
3UTR GCA 72 bp CTTCTTATCCAAATACAGATCTTTCCATATGAACACTaGTCACTGACCAGTCACACCACTGTAGCTCATGAT +
Preference number: 3 (lower is better)
Translates to: LLIQIQIFPYEH*SLTSHTTVAHD
Trigger: ATCATGAGCTACAGTGGTGTGACTGGTCAGTGAGCAGTGTTCATATGGAAAGATCTGTATTTGGATAAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
3UTR CCA 72 bp AGTCATAAATTTGGGAGAAAAAGAGGGTACATAGGATaGGCTGGAGGGTTGAAAGAGAAAAGGGAACCTATA +
Preference number: 3 (lower is better)
Translates to: SHKFGRKRGYIG*AGGLKEKREPI
Trigger: TATAGGTTCCCTTTTCTCTTTCAACCCTCCAGCCCATCCTATGTACCCTCTTTTTCTCCCAAATTTATGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
3UTR TCA 72 bp CATAAACTTCTCTTCTTGTACAAGAAGGGGGAAAAATaGCCAGACCTTGTACTCCTCATAGCAACATTGCAT +
Preference number: 3 (lower is better)
Translates to: HKLLFLYKKGEK*PDLVLLIATLH
Trigger: ATGCAATGTTGCTATGAGGAGTACAAGGTCTGGTCATTTTTCCCCCTTCTTGTACAAGAAGAGAAGTTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
3UTR-3UTR CAA 90 bp GATTTGAAACCCTGTTTCTGGGCTGCATGTAATTTGTTGGATAAACAATTACCCCATAAACTTCTCTTCTaGTACAAGAAGGGGGAAAAA +
Preference number: 3 (lower is better)
Translates to: DLKPCFWAACNLLDKQLPHKLLF*YKKGEK
Trigger: TTTTTCCCCCTTCTTGTACAAGAAGAGAAGTTTATG...GGGTAATTGTTTATCCAACAAATTACATGCAGCCCAGAAACAGGGTTTCAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
3UTR TCA 72 bp AAAGCTGTGTTAAAATGTTGCTCAAATGTAAGGATTTaGAACCCTGTTTCTGGGCTGCATGTAATTTGTTGG +
Preference number: 3 (lower is better)
Translates to: KAVLKCCSNVRI*NPVSGLHVICW
Trigger: CCAACAAATTACATGCAGCCCAGAAACAGGGTTTCAAATCCTTACATTTGAGCAACATTTTAACACAGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
CDS-3UTR GCA 90 bp CAAATACAGATCTTTCCATATGAACACTGCTCACTGACCAGTCACACCACTGTATCCCTGTATGGGCTATaGCTCCAGAGAAGCCCATCA +
Preference number: 4 (lower is better)
Translates to: QIQIFPYEHCSLTSHTTVSLYGL*LQRSPS
Trigger: TGATGGGCTTCTCTGGAGGCATAGCCCATACAGGGA...TACAGTGGTGTGACTGGTCAGTGAGCAGTGTTCATATGGAAAGATCTGTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
CDS-3UTR GCA 90 bp AGTTTTGGCAGAGTAAGAGTCAGGAAGAACAAAGCTGTGTTAAAATGTTGCTCAGGAAGAAGAGGGGCATaGGGAGTCCTGGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SFGRVRVRKNKAVLKCCSGRRGA*GVLVGL
Trigger: CAAACCAACCAGGACTCCGCATGCCCCTCTTCTTCC...TGAGCAACATTTTAACACAGCTTTGTTCTTCCTGACTCTTACTCTGCCAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
CDS-3UTR CCA 90 bp AGTTTTGGCAGAGTAAGAGTCAGGAAGAACAAAGCTGTGTTAAAATGTTGCTCAATGCGGAGTCCTGGTTaGTTTGTCAGGCCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: SFGRVRVRKNKAVLKCCSMRSPG*FVRPAR
Trigger: CCTTGCAGGCCTGACAAACCAACCAGGACTCCGCAT...TGAGCAACATTTTAACACAGCTTTGTTCTTCCTGACTCTTACTCTGCCAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
CDS-3UTR CCA 90 bp GAGTTTTGGCAGAGTAAGAGTCAGGAAGAACAAAGCTGTGTTAAAATGTTGCTCTGGACCTGCCCTCTGTaGAATGCATGTGAAGAATGC +
Preference number: 4 (lower is better)
Translates to: EFWQSKSQEEQSCVKMLLWTCPL*NACEEC
Trigger: GCATTCTTCACATGCATTCCACAGAGGGCAGGTCCA...GAGCAACATTTTAACACAGCTTTGTTCTTCCTGACTCTTACTCTGCCAAAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
CDS-3UTR TCA 90 bp CAAATACAGATCTTTCCATATGAACACTGCTCACTGACCAGTCACACCACTGTACTACAAGCTCATTTGTaGAGGTGTTGCTACAGGAGA +
Preference number: 4 (lower is better)
Translates to: QIQIFPYEHCSLTSHTTVLQAHL*RCCYRR
Trigger: TCTCCTGTAGCAACACCTTCACAAATGAGCTTGTAG...TACAGTGGTGTGACTGGTCAGTGAGCAGTGTTCATATGGAAAGATCTGTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
CDS-3UTR TCA 90 bp CAAATACAGATCTTTCCATATGAACACTGCTCACTGACCAGTCACACCACTGTATCTGTGGAATGCATGTaGAGAATGCTAGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: QIQIFPYEHCSLTSHTTVSVECM*RMLERM
Trigger: CATCCTCTCTAGCATTCTTCACATGCATTCCACAGA...TACAGTGGTGTGACTGGTCAGTGAGCAGTGTTCATATGGAAAGATCTGTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
3UTR CAA 72 bp GATTTGAAACCCTGTTTCTGGGCTGCATGTAATTTGTaGGATAAACAATTACCCAGTATCCATGACGACCTA +
Preference number: 4 (lower is better)
Translates to: DLKPCFWAACNL*DKQLPSIHDDL
Trigger: TAGGTCGTCATGGATACTGGGTAATTGTTTATCCAACAAATTACATGCAGCCCAGAAACAGGGTTTCAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
3UTR CAA 72 bp AAGGATTTGAAACCCTGTTTCTGGGCTGCATGTAATTaGTTGGATAAACAATTACCCAGTATCCATGACGAC +
Preference number: 4 (lower is better)
Translates to: KDLKPCFWAACN*LDKQLPSIHDD
Trigger: GTCGTCATGGATACTGGGTAATTGTTTATCCAACAAATTACATGCAGCCCAGAAACAGGGTTTCAAATCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
CDS-3UTR GCA 90 bp AGTTTTGGCAGAGTAAGAGTCAGGAAGAACAAAGCTGTGTTAAAATGTTGCTCACACACCAATACCAAATaGCACAACAATGAAAACTAC +
Preference number: 4 (lower is better)
Translates to: SFGRVRVRKNKAVLKCCSHTNTK*HNNENY
Trigger: GTAGTTTTCATTGTTGTGGCATTTGGTATTGGTGTG...TGAGCAACATTTTAACACAGCTTTGTTCTTCCTGACTCTTACTCTGCCAAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
3UTR CAA 72 bp AGTAAGAGTCAGGAAGAACAAAGCTGTGTTAAAATGTaGCTCAAATGTAAGGATTTGAAACCCTGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SKSQEEQSCVKM*LKCKDLKPCFW
Trigger: CCAGAAACAGGGTTTCAAATCCTTACATTTGAGCAACATTTTAACACAGCTTTGTTCTTCCTGACTCTTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
CDS-3UTR CCA 90 bp CAGAGTAAGAGTCAGGAAGAACAAAGCTGTGTTAAAATGTTGCTCAAATGTAAGACTTGTAAGCATTTTTaGGATGATAGTGGAGGAATA +
Preference number: 4 (lower is better)
Translates to: QSKSQEEQSCVKMLLKCKTCKHF*DDSGGI
Trigger: TATTCCTCCACTATCATCCCAAAAATGCTTACAAGT...CTTACATTTGAGCAACATTTTAACACAGCTTTGTTCTTCCTGACTCTTACTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2
CDS-3UTR CAA 90 bp AGTTTTGGCAGAGTAAGAGTCAGGAAGAACAAAGCTGTGTTAAAATGTTGCTCATCATTTGTGAAGGTGTaGCTACAGGAGAGCTCAAGA +
Preference number: 5 (lower is better)
Translates to: SFGRVRVRKNKAVLKCCSSFVKV*LQESSR
Trigger: TCTTGAGCTCTCCTGTAGCAACACCTTCACAAATGA...TGAGCAACATTTTAACACAGCTTTGTTCTTCCTGACTCTTACTCTGCCAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215128.2