Pregenerated sensors for OLFR873 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049028Ensembl transcript IDs: ENSMUST00000075717.7, ENSMUST00000215540.2
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGACAGCGGCAAGCATACCCCAGAGTGGGATCAAGAAGATACATTTaGTGTGTTATTATGCATGTGTCTGTCTGTGAACTAAGCCTATGG | + |
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Preference number: 1 (lower is better) Translates to: GQRQAYPRVGSRRYI*CVIMHVSVCELSLW Trigger: CCATAGGCTTAGTTCACAGACAGACACATGCATAATAACACATCAAATGTATCTTCTTGATCCCACTCTGGGGTATGCTTGCCGCTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR TCA 90 bp | GCTTGTTGGGTCTTTTGGAGGTTAGTTATGATAGGTCCCTTTCTGTaGGTCATCAAACCCAAAAACTATTGTAACTGGATGCATGGATCT | + |
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Preference number: 1 (lower is better) Translates to: ACWVFWRLVMIGPFL*VIKPKNYCNWMHGS Trigger: AGATCCATGCATCCAGTTACAATAGTTTTTGGGTTTGATGACTCACAGAAAGGGACCTATCATAACTAACCTCCAAAAGACCCAACAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR GCA 90 bp | AAGTCTTACTATATAGCTGTGACTGGTTGTGTACATAGATTAGCCTaGTTCTGTCTCCAAATGTTGGGATTAAAACTACACAGCCACATC | + |
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Preference number: 1 (lower is better) Translates to: KSYYIAVTGCVHRLA*FCLQMLGLKLHSHI Trigger: GATGTGGCTGTGTAGTTTTAATCCCAACATTTGGAGACAGAAGCAGGCTAATCTATGTACACAACCAGTCACAGCTATATAGTAAGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR TCA 90 bp | ATCAAGAAGATACATTTGATGTGTTATTATGCATGTGTCTGTCTGTaGACTAAGCCTATGGTCTACAGCCATCTACCCTGTATGTACTAC | + |
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Preference number: 1 (lower is better) Translates to: IKKIHLMCYYACVCL*TKPMVYSHLPCMYY Trigger: GTAGTACATACAGGGTAGATGGCTGTAGACCATAGGCTTAGTTCACAGACAGACACATGCATAATAACACATCAAATGTATCTTCTTGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR TCA 90 bp | TACACACAACAAATAAATAAACAAGCAATGGGCCAGAATCCTCTCTaGGAGGTATCCTGTATTGTGACATCTCTGTTTTTGTTGTTGTTG | + |
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Preference number: 1 (lower is better) Translates to: YTQQINKQAMGQNPL*EVSCIVTSLFLLLL Trigger: CAACAACAACAAAAACAGAGATGTCACAATACAGGATACCTCTCAGAGAGGATTCTGGCCCATTGCTTGTTTATTTATTTGTTGTGTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR TCA 90 bp | GAAATAAAACTAAATCCTTATTTCAGGCATCCTGTTCAGACTAGTTaGAATACTAAAAGAGCAGGAAAGATGTGGACAGCGGCAAGCATA | + |
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Preference number: 1 (lower is better) Translates to: EIKLNPYFRHPVQTS*NTKRAGKMWTAASI Trigger: TATGCTTGCCGCTGTCCACATCTTTCCTGCTCTTTTAGTATTTCAACTAGTCTGAACAGGATGCCTGAAATAAGGATTTAGTTTTATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCCTCAGCTTCTTTCAGCCTTCCCTAATTCAACAACAGGGGTCAGCTGCTGCAAACATCTGTATCTaGCTCTTTCAGCTGCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: LLLSFFQPSLIQQQGSAAANICI*LFQLLV Trigger: AACAAGCAGCTGAAAGAGTCAGATACAGATGTTTGC...AGCAGCTGACCCCTGTTGTTGAATTAGGGAAGGCTGAAAGAAGCTGAGGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR CAA 90 bp | GGACACATTGGTCAGATTATGAGGCGCCTTTTATCTAGAATGCTTTaGGGTTTGGGATTTAGCTCCATGGCAGAGTGCTTGCCTAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: GHIGQIMRRLLSRML*GLGFSSMAECLPRF Trigger: GAACCTAGGCAAGCACTCTGCCATGGAGCTAAATCCCAAACCCAAAAGCATTCTAGATAAAAGGCGCCTCATAATCTGACCAATGTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR CAA 90 bp | ATTGGTCAGATTATGAGGCGCCTTTTATCTAGAATGCTTTTGGGTTaGGGATTTAGCTCCATGGCAGAGTGCTTGCCTAGGTTCAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: IGQIMRRLLSRMLLG*GFSSMAECLPRFSL Trigger: GAGACTGAACCTAGGCAAGCACTCTGCCATGGAGCTAAATCCCAAACCCAAAAGCATTCTAGATAAAAGGCGCCTCATAATCTGACCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR CAA 90 bp | ATTGTTTGGGTGCAAACATCTGTATCTGACTCTTTCAGCTGCTTGTaGGGTCTTTTGGAGGTTAGTTATGATAGGTCCCTTTCTGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: IVWVQTSVSDSFSCL*GLLEVSYDRSLSVS Trigger: ACTCACAGAAAGGGACCTATCATAACTAACCTCCAAAAGACCCAACAAGCAGCTGAAAGAGTCAGATACAGATGTTTGCACCCAAACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR-3UTR TCA 90 bp | GGACACATTGGTCAGATTATGAGGCGCCTTTTATCTAGAATGCTTTTGGGTTTGTGTGAGAGGATTGAATaGAGTTTCCAGGATTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: GHIGQIMRRLLSRMLLGLCERIE*SFQDSL Trigger: AAGGGAATCCTGGAAACTTCATTCAATCCTCTCACA...CAAACCCAAAAGCATTCTAGATAAAAGGCGCCTCATAATCTGACCAATGTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR-3UTR TCA 90 bp | GAAACCCCAAGATCTCGAATACTAAAAGAGAGGAAGAACATCTTTAAACTCTTCCTACCCACTTCTGTCTaGATGATGGAACAGACTCCC | + |
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Preference number: 2 (lower is better) Translates to: ETPRSRILKERKNIFKLFLPTSV*MMEQTP Trigger: GGGAGTCTGTTCCATCATTCAGACAGAAGTGGGTAG...GAAGAGTTTAAAGATGTTCTTCCTCTCTTTTAGTATTCGAGATCTTGGGGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR CAA 90 bp | GTGACTGGTTGTGTACATAGATTAGCCTGCTTCTGTCTCCAAATGTaGGGATTAAAACTACACAGCCACATCTGGCTGTATTATAACATG | + |
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Preference number: 2 (lower is better) Translates to: VTGCVHRLACFCLQM*GLKLHSHIWLYYNM Trigger: CATGTTATAATACAGCCAGATGTGGCTGTGTAGTTTTAATCCCAACATTTGGAGACAGAAGCAGGCTAATCTATGTACACAACCAGTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTGCTTGCCTAGGTTCAGTCTCCAGAGTTAAAATGAAAACAATAAATCCTATAGGTCCCTTTCTGTaGGTCATCAAACCCAAAAAC | + |
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Preference number: 2 (lower is better) Translates to: QSACLGSVSRVKMKTINPIGPFL*VIKPKN Trigger: GTTTTTGGGTTTGATGACTCACAGAAAGGGACCTAT...AGGATTTATTGTTTTCATTTTAACTCTGGAGACTGAACCTAGGCAAGCACTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTACTATATAGCTGTGACTGGTTGTGTACATAGATTAGCCTGCTTCTGTCTCACATTGGTCAGATTATaGGGCGCCTTTTATCTAGAA | + |
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Preference number: 2 (lower is better) Translates to: SYYIAVTGCVHRLACFCLTLVRL*GAFYLE Trigger: TTCTAGATAAAAGGCGCCTCATAATCTGACCAATGT...GAGACAGAAGCAGGCTAATCTATGTACACAACCAGTCACAGCTATATAGTAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR-3UTR GCA 90 bp | ATGACTAAAGAAGAATACCATCTCCTTCAAGTTGCCTTTGGCATACTTGCTGTGTGCAAATCAATATTTTaGCATCTCCTCCTCAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: MTKEEYHLLQVAFGILAVCKSIF*HLLLSF Trigger: GAAGCTGAGGAGGAGATGGCAAAATATTGATTTGCA...CACAGCAAGTATGCCAAAGGCAACTTGAAGGAGATGGTATTCTTCTTTAGTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTACTATATAGCTGTGACTGGTTGTGTACATAGATTAGCCTGCTTCTGTCTCGCTTGTTGGGTCTTTTaGAGGTTAGTTATGATAGGT | + |
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Preference number: 2 (lower is better) Translates to: SYYIAVTGCVHRLACFCLACWVF*RLVMIG Trigger: ACCTATCATAACTAACCTCCAAAAGACCCAACAAGC...GAGACAGAAGCAGGCTAATCTATGTACACAACCAGTCACAGCTATATAGTAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR-3UTR CCA 90 bp | ACTAAATCATACACCCAAACCCTAACTACCAACTTTTTAAGAAACCCCAAGATCGAATGCTTTTGGGTTTaGGATTTAGCTCCATGGCAG | + |
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Preference number: 2 (lower is better) Translates to: TKSYTQTLTTNFLRNPKIECFWV*DLAPWQ Trigger: CTGCCATGGAGCTAAATCCCAAACCCAAAAGCATTC...GATCTTGGGGTTTCTTAAAAAGTTGGTAGTTAGGGTTTGGGTGTATGATTTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR-3UTR TCA 90 bp | TACCTCACTAAATCATACACCCAAACCCTAACTACCAACTTTTTAAGAAACCCCAGCTCAGTGAACAAGTaGATTCTTCTTAGAGTGACA | + |
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Preference number: 2 (lower is better) Translates to: YLTKSYTQTLTTNFLRNPSSVNK*ILLRVT Trigger: TGTCACTCTAAGAAGAATTCACTTGTTCACTGAGCT...GGGGTTTCTTAAAAAGTTGGTAGTTAGGGTTTGGGTGTATGATTTAGTGAGGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR-3UTR GCA 90 bp | TACCTCACTAAATCATACACCCAAACCCTAACTACCAACTTTTTAAGAAACCCCATGCATGGATCTAGATaGTTTTCCCCTGCTGTAATT | + |
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Preference number: 2 (lower is better) Translates to: YLTKSYTQTLTTNFLRNPMHGSR*FSPAVI Trigger: AATTACAGCAGGGGAAAAGCATCTAGATCCATGCAT...GGGGTTTCTTAAAAAGTTGGTAGTTAGGGTTTGGGTGTATGATTTAGTGAGGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR-3UTR GCA 90 bp | TACCTCACTAAATCATACACCCAAACCCTAACTACCAACTTTTTAAGAAACCCCCATCCATTGTTTGGGTaGAAACATCTGTATCTGACT | + |
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Preference number: 2 (lower is better) Translates to: YLTKSYTQTLTTNFLRNPHPLFG*KHLYLT Trigger: AGTCAGATACAGATGTTTGCACCCAAACAATGGATG...GGGGTTTCTTAAAAAGTTGGTAGTTAGGGTTTGGGTGTATGATTTAGTGAGGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR-3UTR GCA 90 bp | ATGACTAAAGAAGAATACCATCTCCTTCAAGTTGCCTTTGGCATACTTGCTGTGACTATTGTAACTGGATaGATGGATCTAGATGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: MTKEEYHLLQVAFGILAVTIVTG*MDLDAF Trigger: AAAAGCATCTAGATCCATGCATCCAGTTACAATAGT...CACAGCAAGTATGCCAAAGGCAACTTGAAGGAGATGGTATTCTTCTTTAGTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTACTATATAGCTGTGACTGGTTGTGTACATAGATTAGCCTGCTTCTGTCTCAAAAACTATTGTAACTaGATGCATGGATCTAGATGC | + |
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Preference number: 2 (lower is better) Translates to: SYYIAVTGCVHRLACFCLKNYCN*MHGSRC Trigger: GCATCTAGATCCATGCATCCAGTTACAATAGTTTTT...GAGACAGAAGCAGGCTAATCTATGTACACAACCAGTCACAGCTATATAGTAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR-3UTR CCA 90 bp | GAAACCCCAAGATCTCGAATACTAAAAGAGAGGAAGAACATCTTTAAACTCTTCCTTCCATCCATTGTTTaGGTGCAAACATCTGTATCT | + |
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Preference number: 2 (lower is better) Translates to: ETPRSRILKERKNIFKLFLPSIV*VQTSVS Trigger: AGATACAGATGTTTGCACCCAAACAATGGATGGAAG...GAAGAGTTTAAAGATGTTCTTCCTCTCTTTTAGTATTCGAGATCTTGGGGTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR CAA 90 bp | CATTCACAAACAGACCATTCATCTTTTAACCCTTGTTCAATGTACTaGTATCAGATGGAAATCAGGGTAGATAACAAGTACCAACTTCCA | + |
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Preference number: 2 (lower is better) Translates to: HSQTDHSSFNPCSMY*YQMEIRVDNKYQLP Trigger: TGGAAGTTGGTACTTGTTATCTACCCTGATTTCCATCTGATACAAGTACATTGAACAAGGGTTAAAAGATGAATGGTCTGTTTGTGAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR-3UTR GCA 90 bp | ACTAAATCATACACCCAAACCCTAACTACCAACTTTTTAAGAAACCCCAAGATCGGGACATATATTTTCTaGTATCATGTAGAGAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: TKSYTQTLTTNFLRNPKIGTYIF*YHVESF Trigger: GAAGCTCTCTACATGATAGCAGAAAATATATGTCCC...GATCTTGGGGTTTCTTAAAAAGTTGGTAGTTAGGGTTTGGGTGTATGATTTAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR-3UTR GCA 90 bp | TACCTCACTAAATCATACACCCAAACCCTAACTACCAACTTTTTAAGAAACCCCGCCTTTTATCTAGAATaGTTTTGGGTTTGGGATTTA | + |
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Preference number: 2 (lower is better) Translates to: YLTKSYTQTLTTNFLRNPAFYLE*FWVWDL Trigger: TAAATCCCAAACCCAAAAGCATTCTAGATAAAAGGC...GGGGTTTCTTAAAAAGTTGGTAGTTAGGGTTTGGGTGTATGATTTAGTGAGGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCCTCCTCAGCTTCTTTCAGCCTTCCCTAATTCAACAACAGGGGTCAGCTGCGACTCTTTCAGCTGCTaGTTGGGTCTTTTGGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: SPPQLLSAFPNSTTGVSCDSFSC*LGLLEV Trigger: AACCTCCAAAAGACCCAACAAGCAGCTGAAAGAGTC...GCAGCTGACCCCTGTTGTTGAATTAGGGAAGGCTGAAAGAAGCTGAGGAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCCTCCTCAGCTTCTTTCAGCCTTCCCTAATTCAACAACAGGGGTCAGCTGCTCTTTCAGCTGCTTGTaGGGTCTTTTGGAGGTTAGT | + |
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Preference number: 3 (lower is better) Translates to: SPPQLLSAFPNSTTGVSCSFSCL*GLLEVS Trigger: ACTAACCTCCAAAAGACCCAACAAGCAGCTGAAAGA...GCAGCTGACCCCTGTTGTTGAATTAGGGAAGGCTGAAAGAAGCTGAGGAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR CCA 72 bp | TTCAACAACAGGGGTCAGCTGCTTCCATCCATTGTTTaGGTGCAAACATCTGTATCTGACTCTTTCAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: FNNRGQLLPSIV*VQTSVSDSFSC Trigger: GCAGCTGAAAGAGTCAGATACAGATGTTTGCACCCAAACAATGGATGGAAGCAGCTGACCCCTGTTGTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR CCA 72 bp | TATCTAGAATGCTTTTGGGTTTGGGATTTAGCTCCATaGCAGAGTGCTTGCCTAGGTTCAGTCTCCAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: YLECFWVWDLAP*QSACLGSVSRV Trigger: AACTCTGGAGACTGAACCTAGGCAAGCACTCTGCCATGGAGCTAAATCCCAAACCCAAAAGCATTCTAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR CCA 72 bp | GTTATTATGCATGTGTCTGTCTGTGAACTAAGCCTATaGTCTACAGCCATCTACCCTGTATGTACTACCCAC | + |
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Preference number: 3 (lower is better) Translates to: VIMHVSVCELSL*STAIYPVCTTH Trigger: GTGGGTAGTACATACAGGGTAGATGGCTGTAGACCATAGGCTTAGTTCACAGACAGACACATGCATAATAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR GCA 72 bp | AGAATACCATCTCCTTCAAGTTGCCTTTGGCATACTTaGTGTGGCATGTGTATCATTCACATACACACAACA | + |
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Preference number: 3 (lower is better) Translates to: RIPSPSSCLWHT*CGMCIIHIHTT Trigger: TGTTGTGTGTATGTGAATGATACACATGCCACAGCAAGTATGCCAAAGGCAACTTGAAGGAGATGGTATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR-3UTR CAA 90 bp | TCAAGTTGCCTTTGGCATACTTGCTGTGGCATGTGTATCATTCACATACACACATTGCAAATCAATATTTaGCCATCTCCTCCTCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: SSCLWHTCCGMCIIHIHTLQINI*PSPPQL Trigger: AAGCTGAGGAGGAGATGGCAAAATATTGATTTGCAA...TGTGTGTATGTGAATGATACACATGCCACAGCAAGTATGCCAAAGGCAACTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR TCA 72 bp | CTAAATCCTTATTTCAGGCATCCTGTTCAGACTAGTTaGAATACTAAAAGAGCAGGAAAGATGTGGACAGCG | + |
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Preference number: 3 (lower is better) Translates to: LNPYFRHPVQTS*NTKRAGKMWTA Trigger: CGCTGTCCACATCTTTCCTGCTCTTTTAGTATTTCAACTAGTCTGAACAGGATGCCTGAAATAAGGATTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR TCA 72 bp | GTCTTTTGGAGGTTAGTTATGATAGGTCCCTTTCTGTaGGTCATCAAACCCAAAAACTATTGTAACTGGATG | + |
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Preference number: 3 (lower is better) Translates to: VFWRLVMIGPFL*VIKPKNYCNWM Trigger: CATCCAGTTACAATAGTTTTTGGGTTTGATGACTCACAGAAAGGGACCTATCATAACTAACCTCCAAAAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR TCA 72 bp | CAAATAAATAAACAAGCAATGGGCCAGAATCCTCTCTaGGAGGTATCCTGTATTGTGACATCTCTGTTTTTG | + |
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Preference number: 3 (lower is better) Translates to: QINKQAMGQNPL*EVSCIVTSLFL Trigger: CAAAAACAGAGATGTCACAATACAGGATACCTCTCAGAGAGGATTCTGGCCCATTGCTTGTTTATTTATTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR TCA 72 bp | ATTGCCACCAAGTGTGACAACCTTAGTTTAATTCCTTaGACCCACATGACTAAAGAAGAATACCATCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: IATKCDNLSLIP*THMTKEEYHLL Trigger: AAGGAGATGGTATTCTTCTTTAGTCATGTGGGTTCAAGGAATTAAACTAAGGTTGTCACACTTGGTGGCAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR CCA 72 bp | CTCCAAATGTTGGGATTAAAACTACACAGCCACATCTaGCTGTATTATAACATGGCTTCATTTATTCCCACT | + |
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Preference number: 3 (lower is better) Translates to: LQMLGLKLHSHI*LYYNMASFIPT Trigger: AGTGGGAATAAATGAAGCCATGTTATAATACAGCCAGATGTGGCTGTGTAGTTTTAATCCCAACATTTGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR CCA 72 bp | CATACACACAATATTAAACACGTTTTTCCTGTGCTATaGATCAAATCTAGGGACCGATACATGCTAACTACC | + |
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Preference number: 3 (lower is better) Translates to: HTHNIKHVFPVL*IKSRDRYMLTT Trigger: GGTAGTTAGCATGTATCGGTCCCTAGATTTGATCCATAGCACAGGAAAAACGTGTTTAATATTGTGTGTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR-3UTR CAA 90 bp | GAAACCCCAAGATCTCGAATACTAAAAGAGAGGAAGAACATCTTTAAACTCTTCACTAGTGTGAGAGGATaGAATGAAGTTTCCAGGATT | + |
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Preference number: 3 (lower is better) Translates to: ETPRSRILKERKNIFKLFTSVRG*NEVSRI Trigger: AATCCTGGAAACTTCATTCAATCCTCTCACACTAGT...GAAGAGTTTAAAGATGTTCTTCCTCTCTTTTAGTATTCGAGATCTTGGGGTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| CDS-3UTR CCA 90 bp | TCTCCTCCTCAGCTTCTTTCAGCCTTCCCTAATTCAACAACAGGGGTCAGCTGCCCACTGCAGTACTTCTaGGAGAATGTGATACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SPPQLLSAFPNSTTGVSCPLQYF*ENVIQL Trigger: CAGCTGTATCACATTCTCCCAGAAGTACTGCAGTGG...GCAGCTGACCCCTGTTGTTGAATTAGGGAAGGCTGAAAGAAGCTGAGGAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| CDS-3UTR CCA 90 bp | CTTCTTTCAGCCTTCCCTAATTCAACAACAGGGGTCAGCTGCTTCCATCCATTGCCTCCCACCTTTCGATaGTATTTTCAGAATGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: LLSAFPNSTTGVSCFHPLPPTFR*YFQNGE Trigger: TTCTCCATTCTGAAAATACCATCGAAAGGTGGGAGG...CAATGGATGGAAGCAGCTGACCCCTGTTGTTGAATTAGGGAAGGCTGAAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR CAA 72 bp | ATTATGAGGCGCCTTTTATCTAGAATGCTTTTGGGTTaGGGATTTAGCTCCATGGCAGAGTGCTTGCCTAGG | + |
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Preference number: 4 (lower is better) Translates to: IMRRLLSRMLLG*GFSSMAECLPR Trigger: CCTAGGCAAGCACTCTGCCATGGAGCTAAATCCCAAACCCAAAAGCATTCTAGATAAAAGGCGCCTCATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR CAA 72 bp | GGTCAGATTATGAGGCGCCTTTTATCTAGAATGCTTTaGGGTTTGGGATTTAGCTCCATGGCAGAGTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: GQIMRRLLSRML*GLGFSSMAECL Trigger: CAAGCACTCTGCCATGGAGCTAAATCCCAAACCCAAAAGCATTCTAGATAAAAGGCGCCTCATAATCTGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| CDS-3UTR GCA 90 bp | GTGCAAACATCTGTATCTGACTCTTTCAGCTGCTTGTTGGGTCTTTTGGAGGTTGGCAATGAGATTGTGTaGCTGAGAATCCACAAGACT | + |
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Preference number: 4 (lower is better) Translates to: VQTSVSDSFSCLLGLLEVGNEIV*LRIHKT Trigger: AGTCTTGTGGATTCTCAGGCACACAATCTCATTGCC...AACCTCCAAAAGACCCAACAAGCAGCTGAAAGAGTCAGATACAGATGTTTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| CDS-3UTR GCA 90 bp | CAGAGTGCTTGCCTAGGTTCAGTCTCCAGAGTTAAAATGAAAACAATAAATCCTCCGAAGAGAATGGGCTaGAGTTCTGGATCATCAGAG | + |
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Preference number: 4 (lower is better) Translates to: QSACLGSVSRVKMKTINPPKRMG*SSGSSE Trigger: CTCTGATGATCCAGAACTGCAGCCCATTCTCTTCGG...AGGATTTATTGTTTTCATTTTAACTCTGGAGACTGAACCTAGGCAAGCACTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR CAA 72 bp | GTGCAAACATCTGTATCTGACTCTTTCAGCTGCTTGTaGGGTCTTTTGGAGGTTAGTTATGATAGGTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: VQTSVSDSFSCL*GLLEVSYDRSL Trigger: AAGGGACCTATCATAACTAACCTCCAAAAGACCCAACAAGCAGCTGAAAGAGTCAGATACAGATGTTTGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| CDS-3UTR TCA 90 bp | CAGAGTGCTTGCCTAGGTTCAGTCTCCAGAGTTAAAATGAAAACAATAAATCCTCACAGTGTATATCAGTaGGGCCACTGCAGTACTTCT | + |
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Preference number: 4 (lower is better) Translates to: QSACLGSVSRVKMKTINPHSVYQ*GHCSTS Trigger: AGAAGTACTGCAGTGGCCTCACTGATATACACTGTG...AGGATTTATTGTTTTCATTTTAACTCTGGAGACTGAACCTAGGCAAGCACTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR CAA 72 bp | TGTGTACATAGATTAGCCTGCTTCTGTCTCCAAATGTaGGGATTAAAACTACACAGCCACATCTGGCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: CVHRLACFCLQM*GLKLHSHIWLY Trigger: ATACAGCCAGATGTGGCTGTGTAGTTTTAATCCCAACATTTGGAGACAGAAGCAGGCTAATCTATGTACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| 3UTR CAA 72 bp | AAGAATACCATCTCCTTCAAGTTGCCTTTGGCATACTaGCTGTGGCATGTGTATCATTCACATACACACAAC | + |
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Preference number: 4 (lower is better) Translates to: KNTISFKLPLAY*LWHVYHSHTHN Trigger: GTTGTGTGTATGTGAATGATACACATGCCACAGCAAGTATGCCAAAGGCAACTTGAAGGAGATGGTATTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| CDS-3UTR TCA 90 bp | GTGCAAACATCTGTATCTGACTCTTTCAGCTGCTTGTTGGGTCTTTTGGAGGTTATTATCTCTTTGCTGTaGGTTTGGATGTTCACAATC | + |
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Preference number: 4 (lower is better) Translates to: VQTSVSDSFSCLLGLLEVIISLL*VWMFTI Trigger: GATTGTGAACATCCAAACTCACAGCAAAGAGATAAT...AACCTCCAAAAGACCCAACAAGCAGCTGAAAGAGTCAGATACAGATGTTTGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| CDS-3UTR TCA 90 bp | GTGCAAACATCTGTATCTGACTCTTTCAGCTGCTTGTTGGGTCTTTTGGAGGTTAAAAAGGATCAAAAATaGCATCTGTGTAAGGCATCC | + |
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Preference number: 4 (lower is better) Translates to: VQTSVSDSFSCLLGLLEVKKDQK*HLCKAS Trigger: GGATGCCTTACACAGATGTCATTTTTGATCCTTTTT...AACCTCCAAAAGACCCAACAAGCAGCTGAAAGAGTCAGATACAGATGTTTGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| CDS-3UTR TCA 90 bp | TACCTCACTAAATCATACACCCAAACCCTAACTACCAACTTTTTAAGAAACCCCATGAGATTGTGTGCCTaGGAATCCACAAGACTAATC | + |
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Preference number: 4 (lower is better) Translates to: YLTKSYTQTLTTNFLRNPMRLCA*ESTRLI Trigger: GATTAGTCTTGTGGATTCTCAGGCACACAATCTCAT...GGGGTTTCTTAAAAAGTTGGTAGTTAGGGTTTGGGTGTATGATTTAGTGAGGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| CDS-3UTR TCA 90 bp | TCTTACTATATAGCTGTGACTGGTTGTGTACATAGATTAGCCTGCTTCTGTCTCTACAACATTCTTCTGTaGAGTCTCTTCACTGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: SYYIAVTGCVHRLACFCLYNILL*SLFTAL Trigger: AAGAGCAGTGAAGAGACTTCACAGAAGAATGTTGTA...GAGACAGAAGCAGGCTAATCTATGTACACAACCAGTCACAGCTATATAGTAAGA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| CDS-3UTR GCA 90 bp | GTGCAAACATCTGTATCTGACTCTTTCAGCTGCTTGTTGGGTCTTTTGGAGGTTCATAGATTATCTCTTTaGTGTGAGTTTGGATGTTCA | + |
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Preference number: 4 (lower is better) Translates to: VQTSVSDSFSCLLGLLEVHRLSL*CEFGCS Trigger: TGAACATCCAAACTCACAGCAAAGAGATAATCTATG...AACCTCCAAAAGACCCAACAAGCAGCTGAAAGAGTCAGATACAGATGTTTGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| CDS-3UTR TCA 90 bp | CAGAGTGCTTGCCTAGGTTCAGTCTCCAGAGTTAAAATGAAAACAATAAATCCTCATCAGAGATTCTCATaGGATGGAATTCTGAGACTA | + |
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Preference number: 4 (lower is better) Translates to: QSACLGSVSRVKMKTINPHQRFS*DGILRL Trigger: TAGTCTCAGAATTCCATCTCATGAGAATCTCTGATG...AGGATTTATTGTTTTCATTTTAACTCTGGAGACTGAACCTAGGCAAGCACTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| CDS-3UTR GCA 90 bp | GAAACCCCAAGATCTCGAATACTAAAAGAGAGGAAGAACATCTTTAAACTCTTCGTGAAGTCTCTTCACTaGTCTTTTAATGTCCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: ETPRSRILKERKNIFKLFVKSLH*SFNVLV Trigger: AACAAGGACATTAAAAGAGCAGTGAAGAGACTTCAC...GAAGAGTTTAAAGATGTTCTTCCTCTCTTTTAGTATTCGAGATCTTGGGGTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| CDS-3UTR CCA 90 bp | GAAACCCCAAGATCTCGAATACTAAAAGAGAGGAAGAACATCTTTAAACTCTTCGAGATTCTCATGAGATaGAATTCTGAGACTAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: ETPRSRILKERKNIFKLFEILMR*NSETSV Trigger: AACACTAGTCTCAGAATTCCATCTCATGAGAATCTC...GAAGAGTTTAAAGATGTTCTTCCTCTCTTTTAGTATTCGAGATCTTGGGGTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215540.2 |
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| CDS TCA 90 bp | TCAGAGATTCTCATGAGATGGAATTCTGAGACTAGTGTTAGGTTTTaGAGTTCTATATTGTTTGAACAGTGGCCTAGGCTGTGTCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: SEILMRWNSETSVRF*SSILFEQWPRLCLC Trigger: GCAGAGACACAGCCTAGGCCACTGTTCAAACAATATAGAACTTCAAAACCTAACACTAGTCTCAGAATTCCATCTCATGAGAATCTCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075717.7 |
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| CDS CAA 72 bp | CTGAGACTAGTGTTAGGTTTTGAAGTTCTATATTGTTaGAACAGTGGCCTAGGCTGTGTCTCTGCAGGGACA | + |
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Preference number: 6 (lower is better) Translates to: LRLVLGFEVLYC*NSGLGCVSAGT Trigger: TGTCCCTGCAGAGACACAGCCTAGGCCACTGTTCAAACAATATAGAACTTCAAAACCTAACACTAGTCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075717.7 |
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| CDS TCA 72 bp | CTCATGAGATGGAATTCTGAGACTAGTGTTAGGTTTTaGAGTTCTATATTGTTTGAACAGTGGCCTAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LMRWNSETSVRF*SSILFEQWPRL Trigger: CAGCCTAGGCCACTGTTCAAACAATATAGAACTTCAAAACCTAACACTAGTCTCAGAATTCCATCTCATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075717.7 |
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