Pregenerated sensors for OLFR872 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066897Ensembl transcript IDs: ENSMUST00000086474.6
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGCAATAAAATTGAAATTATGGGAAATTGTTTCCATGACATGTTaGATTGTAGTTCTTTGCATAAGTACCCAGGAATTGTGGAGACGG | + |
|
Preference number: 1 (lower is better) Translates to: AAIKLKLWEIVSMTC*IVVLCISTQELWRR Trigger: CCGTCTCCACAATTCCTGGGTACTTATGCAAAGAACTACAATTCAACATGTCATGGAAACAATTTCCCATAATTTCAATTTTATTGCAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086474.6 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGCATAAGTACCCAGGAATTGTGGAGACGGACCATAAAGAAAATCAACTTTGCATTTAGGTATTGGTaGAGTGGAATGAAAGCCACA | + |
|
Preference number: 2 (lower is better) Translates to: LCISTQELWRRTIKKINFAFRYW*SGMKAT Trigger: TGTGGCTTTCATTCCACTCCACCAATACCTAAATGC...AAAGTTGATTTTCTTTATGGTCCGTCTCCACAATTCCTGGGTACTTATGCAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086474.6 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGCATAAGTACCCAGGAATTGTGGAGACGGACCATAAAGAAAATCAACTTTGTGGTTGAGATGAAATaGAGTATTGTTTTATCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: LCISTQELWRRTIKKINFVVEMK*SIVLSE Trigger: CTCAGATAAAACAATACTCCATTTCATCTCAACCAC...AAAGTTGATTTTCTTTATGGTCCGTCTCCACAATTCCTGGGTACTTATGCAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086474.6 |
||
| 3UTR CAA 90 bp | AGCTGCAATAAAATTGAAATTATGGGAAATTGTTTCCATGACATGTaGAATTGTAGTTCTTTGCATAAGTACCCAGGAATTGTGGAGACG | + |
|
Preference number: 2 (lower is better) Translates to: SCNKIEIMGNCFHDM*NCSSLHKYPGIVET Trigger: CGTCTCCACAATTCCTGGGTACTTATGCAAAGAACTACAATTCAACATGTCATGGAAACAATTTCCCATAATTTCAATTTTATTGCAGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086474.6 |
||
| CDS-3UTR TCA 90 bp | CTTTGCATAAGTACCCAGGAATTGTGGAGACGGACCATAAAGAAAATCAACTTTAGCTCACATAGGAGATaGCTCTGCTTTGAGTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LCISTQELWRRTIKKINFSSHRR*LCFEFQ Trigger: TTGGAACTCAAAGCAGAGTCATCTCCTATGTGAGCT...AAAGTTGATTTTCTTTATGGTCCGTCTCCACAATTCCTGGGTACTTATGCAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086474.6 |
||
| CDS-3UTR GCA 90 bp | CTTTGCATAAGTACCCAGGAATTGTGGAGACGGACCATAAAGAAAATCAACTTTGCTCTTCTCTGCAGCTaGCAAAGAGCAGTTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: LCISTQELWRRTIKKINFALLCS*QRAVLM Trigger: CATTAAAACTGCTCTTTGGCAGCTGCAGAGAAGAGC...AAAGTTGATTTTCTTTATGGTCCGTCTCCACAATTCCTGGGTACTTATGCAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086474.6 |
||
| CDS-3UTR GCA 90 bp | CTTTGCATAAGTACCCAGGAATTGTGGAGACGGACCATAAAGAAAATCAACTTTTACATTGCTCTTCTCTaGAGCTGCCAAAGAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCISTQELWRRTIKKINFYIALL*SCQRAV Trigger: AACTGCTCTTTGGCAGCTGCAGAGAAGAGCAATGTA...AAAGTTGATTTTCTTTATGGTCCGTCTCCACAATTCCTGGGTACTTATGCAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086474.6 |
||
| CDS-3UTR TCA 90 bp | AAGGAATATGCATTTAGGTATTGGTGGAGTGGAATGAAAGCCACAATAACAAAGGATTTCCAAGCACTGTaGCCATGTAGAAGGATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KEYAFRYWWSGMKATITKDFQAL*PCRRIK Trigger: TTTTATCCTTCTACATGGTCACAGTGCTTGGAAATC...CTTTGTTATTGTGGCTTTCATTCCACTCCACCAATACCTAAATGCATATTCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086474.6 |
||
| CDS-3UTR TCA 90 bp | AAGGAATATGCATTTAGGTATTGGTGGAGTGGAATGAAAGCCACAATAACAAAGGGAATTCGATGCAGTTaGACCAATGTATACTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KEYAFRYWWSGMKATITKGIRCS*TNVYSN Trigger: ATTGGAGTATACATTGGTTCAACTGCATCGAATTCC...CTTTGTTATTGTGGCTTTCATTCCACTCCACCAATACCTAAATGCATATTCCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086474.6 |
||
| CDS-3UTR CCA 90 bp | CTTTGCATAAGTACCCAGGAATTGTGGAGACGGACCATAAAGAAAATCAACTTTCTTTCCATCTTTTGTTaGAATTCTCAGGATGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCISTQELWRRTIKKINFLSIFC*NSQDGR Trigger: TCTTCCATCCTGAGAATTCCAACAAAAGATGGAAAG...AAAGTTGATTTTCTTTATGGTCCGTCTCCACAATTCCTGGGTACTTATGCAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086474.6 |
||
| 3UTR CAA 72 bp | CCCTTATGTTTTCTTGTTCCATCCTATTACTCTTCATaGTCCAACCAGAGATATTTGTTTGTACTTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLCFLVPSYYSS*SNQRYLFVLSV Trigger: GACAGAAAGTACAAACAAATATCTCTGGTTGGACAATGAAGAGTAATAGGATGGAACAAGAAAACATAAGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086474.6 |
||
| CDS-3UTR CAA 90 bp | AAGGAATATGCATTTAGGTATTGGTGGAGTGGAATGAAAGCCACAATAACAAAGTATACTTTCCATCTTTaGTTGGAATTCTCAGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: KEYAFRYWWSGMKATITKYTFHL*LEFSGW Trigger: CCATCCTGAGAATTCCAACAAAAGATGGAAAGTATA...CTTTGTTATTGTGGCTTTCATTCCACTCCACCAATACCTAAATGCATATTCCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086474.6 |
||
| CDS TCA 72 bp | GGAAAGGCTGTAGTTCTACATTCTCTGAGAGGCTCATaGGATGGAACTGTGAGACAACTGGTAGATTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GKAVVLHSLRGS*DGTVRQLVDFV Trigger: CACAAAATCTACCAGTTGTCTCACAGTTCCATCTCATGAGCCTCTCAGAGAATGTAGAACTACAGCCTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086474.6 |
||
| CDS CCA 72 bp | GGCTGTAGTTCTACATTCTCTGAGAGGCTCATGAGATaGAACTGTGAGACAACTGGTAGATTTTGTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GCSSTFSERLMR*NCETTGRFCAS Trigger: AGAAGCACAAAATCTACCAGTTGTCTCACAGTTCCATCTCATGAGCCTCTCAGAGAATGTAGAACTACAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086474.6 |
||
| CDS TCA 72 bp | AGCAATTGCACAGTTTTTAGGGGAATTCGATGCAGTTaGACCAATGTATACTCCAATGGATGTTCCATAAAA | + |
|
Preference number: 6 (lower is better) Translates to: SNCTVFRGIRCS*TNVYSNGCSIK Trigger: TTTTATGGAACATCCATTGGAGTATACATTGGTTCAACTGCATCGAATTCCCCTAAAAACTGTGCAATTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086474.6 |
||