Pregenerated sensors for OLFR870 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066899Ensembl transcript IDs: ENSMUST00000215984.3
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGATTTGGTGTCTACACAGAGGCAATTTTCTGGCTCATAGAGAGTaGCTTCCTACTATGGTCTCATGTTGTAGTAGAGATACAAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: QIWCLHRGNFLAHRE*LPTMVSCCSRDTKA Trigger: AGCCTTTGTATCTCTACTACAACATGAGACCATAGTAGGAAGGCACTCTCTATGAGCCAGAAAATTGCCTCTGTGTAGACACCAAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR CCA 90 bp | ACTTATTCCCCATCTATAAGACCTCTTGATACTTGTGGTTTCTACTaGCAGCATGGTTCTTGTCCATTGTCTTCCTTCATCCTCTCATCC | + |
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Preference number: 1 (lower is better) Translates to: TYSPSIRPLDTCGFY*QHGSCPLSSFILSS Trigger: GGATGAGAGGATGAAGGAAGACAATGGACAAGAACCATGCTGCCAGTAGAAACCACAAGTATCAAGAGGTCTTATAGATGGGGAATAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR GCA 90 bp | AATTGGGGAAAGGTTCACATGAGATCACCTGAGTATGTGATGTACTaGAGGGGCAATCCCTCTTCAGGAAGCAGAATTAATATCAGAATA | + |
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Preference number: 1 (lower is better) Translates to: NWGKVHMRSPEYVMY*RGNPSSGSRINIRI Trigger: TATTCTGATATTAATTCTGCTTCCTGAAGAGGGATTGCCCCTGCAGTACATCACATACTCAGGTGATCTCATGTGAACCTTTCCCCAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR-3UTR TCA 90 bp | CCCAGTCGTACCTTTCCCCTCCACTGCCCAATCACAGGTTCTAGCCTTTATTGGTCACATGAGATCACCTaGGTATGTGATGTACTGCAG | + |
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Preference number: 2 (lower is better) Translates to: PSRTFPLHCPITGSSLYWSHEIT*VCDVLQ Trigger: CTGCAGTACATCACATACTCAGGTGATCTCATGTGA...CCAATAAAGGCTAGAACCTGTGATTGGGCAGTGGAGGGGAAAGGTACGACTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR-3UTR GCA 90 bp | AGCCTTCACCTACAGAGCTGCAGCCTAATCTCCTATAGAAGGCCTTCCTTTCCTGAGTATGTGATGTACTaGAGGGGCAATCCCTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: SLHLQSCSLISYRRPSFPEYVMY*RGNPSS Trigger: TGAAGAGGGATTGCCCCTGCAGTACATCACATACTC...AGGAAAGGAAGGCCTTCTATAGGAGATTAGGCTGCAGCTCTGTAGGTGAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR-3UTR GCA 90 bp | CTCTTGATACTTGTGGTTTCTACTGGCAGCATGGTTCTTGTCCATTGTCTTCCTTTCTATCTCTCTACCTaGCTCCCACTCTTTAATGCC | + |
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Preference number: 2 (lower is better) Translates to: LLILVVSTGSMVLVHCLPFYLST*LPLFNA Trigger: GGCATTAAAGAGTGGGAGGCAGGTAGAGAGATAGAA...AGGAAGACAATGGACAAGAACCATGCTGCCAGTAGAAACCACAAGTATCAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR CAA 90 bp | ACTGCTCTCTCCAACAGAGTATATCTCTTACAGTGCCTTGATACATaGTATACATTTCAGGTTTCAAGATCATTTTACATCCTTTCATCA | + |
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Preference number: 2 (lower is better) Translates to: TALSNRVYLLQCLDT*YTFQVSRSFYILSS Trigger: TGATGAAAGGATGTAAAATGATCTTGAAACCTGAAATGTATACAATGTATCAAGGCACTGTAAGAGATATACTCTGTTGGAGAGAGCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR CCA 72 bp | CCACGCCCACCTCACTGCTCTAACATACCCCTGTGCTaGGGCATCAAGCCTTCACAGGACCAAGGACTTCTC | + |
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Preference number: 3 (lower is better) Translates to: PRPPHCSNIPLC*GIKPSQDQGLL Trigger: GAGAAGTCCTTGGTCCTGTGAAGGCTTGATGCCCCAGCACAGGGGTATGTTAGAGCAGTGAGGTGGGCGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR CCA 72 bp | GAACCCTGGACTGTCTCTTTTCATCAAGATCCCCCATaGGGAGCCATGAAGAAAGCCTTCACCTACAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: EPWTVSFHQDPP*GAMKKAFTYRA Trigger: AGCTCTGTAGGTGAAGGCTTTCTTCATGGCTCCCCATGGGGGATCTTGATGAAAAGAGACAGTCCAGGGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR CCA 72 bp | ATGCCAGATAAGGCCATTCTCTGTTACACTAGCAGCTaGAGCTATGGACCCTATCATGTGTACTCTGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: MPDKAILCYTSS*SYGPYHVYSGA Trigger: TGCTCCAGAGTACACATGATAGGGTCCATAGCTCCAGCTGCTAGTGTAACAGAGAATGGCCTTATCTGGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR-3UTR CAA 90 bp | AGCCTTCACCTACAGAGCTGCAGCCTAATCTCCTATAGAAGGCCTTCCTTTCCTATTGGCCAGTTAAAATaGGGGAAAGGTTCACATGAG | + |
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Preference number: 3 (lower is better) Translates to: SLHLQSCSLISYRRPSFPIGQLK*GKGSHE Trigger: CTCATGTGAACCTTTCCCCAATTTTAACTGGCCAAT...AGGAAAGGAAGGCCTTCTATAGGAGATTAGGCTGCAGCTCTGTAGGTGAAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR TCA 72 bp | CCTGCCTGCAAAAGGTATTTAATCTCAGGTCCACCCTaGGAAGTGGAGTTTAGTTTTATGCATCCACTCTCC | + |
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Preference number: 3 (lower is better) Translates to: PACKRYLISGPP*EVEFSFMHPLS Trigger: GGAGAGTGGATGCATAAAACTAAACTCCACTTCTCAGGGTGGACCTGAGATTAAATACCTTTTGCAGGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR TCA 72 bp | GCTGAGAAACACCCACAGAACAGTATACAAGTAGGATaGTGGAATGAAACAGCTGCTTGGGTACATCTCCTA | + |
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Preference number: 3 (lower is better) Translates to: AEKHPQNSIQVG*WNETAAWVHLL Trigger: TAGGAGATGTACCCAAGCAGCTGTTTCATTCCATCATCCTACTTGTATACTGTTCTGTGGGTGTTTCTCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR GCA 72 bp | AAGGTTCACATGAGATCACCTGAGTATGTGATGTACTaGAGGGGCAATCCCTCTTCAGGAAGCAGAATTAAT | + |
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Preference number: 3 (lower is better) Translates to: KVHMRSPEYVMY*RGNPSSGSRIN Trigger: ATTAATTCTGCTTCCTGAAGAGGGATTGCCCCTGCAGTACATCACATACTCAGGTGATCTCATGTGAACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR TCA 72 bp | TTGCTATCCAAGAGCAAAGCAGTTTTTGCAGGTAGCTaGGAAACACCCACAGAACAGTATACAAGTAGGATG | + |
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Preference number: 3 (lower is better) Translates to: LLSKSKAVFAGS*ETPTEQYTSRM Trigger: CATCCTACTTGTATACTGTTCTGTGGGTGTTTCTCAGCTACCTGCAAAAACTGCTTTGCTCTTGGATAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR GCA 72 bp | TGTCTACACAGAGGCAATTTTCTGGCTCATAGAGAGTaGCTTCCTACTATGGTCTCATGTTGTAGTAGAGAT | + |
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Preference number: 3 (lower is better) Translates to: CLHRGNFLAHRE*LPTMVSCCSRD Trigger: ATCTCTACTACAACATGAGACCATAGTAGGAAGGCACTCTCTATGAGCCAGAAAATTGCCTCTGTGTAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR CCA 72 bp | CCATCTATAAGACCTCTTGATACTTGTGGTTTCTACTaGCAGCATGGTTCTTGTCCATTGTCTTCCTTCATC | + |
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Preference number: 3 (lower is better) Translates to: PSIRPLDTCGFY*QHGSCPLSSFI Trigger: GATGAAGGAAGACAATGGACAAGAACCATGCTGCCAGTAGAAACCACAAGTATCAAGAGGTCTTATAGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR-3UTR CAA 90 bp | ATAGAGAGTGCCTTCCTACTATGGTCTCATGTTGTAGTAGAGATACAAAGGCTCATTGGTTGTCACAATTaGACATATACACCAGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: IESAFLLWSHVVVEIQRLIGCHN*TYTPEG Trigger: TCCCTCTGGTGTATATGTCAAATTGTGACAACCAAT...GAGCCTTTGTATCTCTACTACAACATGAGACCATAGTAGGAAGGCACTCTCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR GCA 72 bp | ACAGCTGCTTGGGTACATCTCCTAAGTAGCTCCTTGTaGATCTGGAATGTTATCTTGTATAAGTCATTTATA | + |
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Preference number: 3 (lower is better) Translates to: TAAWVHLLSSSL*IWNVILYKSFI Trigger: TATAAATGACTTATACAAGATAACATTCCAGATGCACAAGGAGCTACTTAGGAGATGTACCCAAGCAGCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR TCA 72 bp | TGCTCTCTCCAACAGAGTATATCTCTTACAGTGCCTTaGTACATTGTATACATTTCAGGTTTCAAGATCATT | + |
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Preference number: 3 (lower is better) Translates to: CSLQQSISLTVP*YIVYISGFKII Trigger: AATGATCTTGAAACCTGAAATGTATACAATGTATCAAGGCACTGTAAGAGATATACTCTGTTGGAGAGAGCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| CDS-3UTR TCA 90 bp | CCCAGTCGTACCTTTCCCCTCCACTGCCCAATCACAGGTTCTAGCCTTTATTGGAGCAAACCACTTAGTTaGGGATTCATAATGACTGAA | + |
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Preference number: 4 (lower is better) Translates to: PSRTFPLHCPITGSSLYWSKPLS*GFIMTE Trigger: TTCAGTCATTATGAATCCTCAACTAAGTGGTTTGCT...CCAATAAAGGCTAGAACCTGTGATTGGGCAGTGGAGGGGAAAGGTACGACTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR CAA 72 bp | ATCAAGCCTTCACAGGACCAAGGACTTCTCCTCCAATaGATGCCAGATAAGGCCATTCTCTGTTACACTAGC | + |
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Preference number: 4 (lower is better) Translates to: IKPSQDQGLLLQ*MPDKAILCYTS Trigger: GCTAGTGTAACAGAGAATGGCCTTATCTGGCATCAATTGGAGGAGAAGTCCTTGGTCCTGTGAAGGCTTGAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| CDS-3UTR TCA 90 bp | AGCCTTCACCTACAGAGCTGCAGCCTAATCTCCTATAGAAGGCCTTCCTTTCCTAAAGAAGGATATGATTaGTTAGTGTATCTGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SLHLQSCSLISYRRPSFPKEGYD*LVYLSR Trigger: CCTGCTCAGATACACTAATCAATCATATCCTTCTTT...AGGAAAGGAAGGCCTTCTATAGGAGATTAGGCTGCAGCTCTGTAGGTGAAGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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| 3UTR CAA 72 bp | CTGCTCTCTCCAACAGAGTATATCTCTTACAGTGCCTaGATACATTGTATACATTTCAGGTTTCAAGATCAT | + |
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Preference number: 4 (lower is better) Translates to: LLSPTEYISYSA*IHCIHFRFQDH Trigger: ATGATCTTGAAACCTGAAATGTATACAATGTATCAAGGCACTGTAAGAGATATACTCTGTTGGAGAGAGCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215984.3 |
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