Pregenerated sensors for OLFR868 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044106Ensembl transcript IDs: ENSMUST00000212767.4, ENSMUST00000212999.4
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTAAGTGCATATAAACTACCAATGTTCAAACAAGGGAAGATAAAATaGGCACATCACAATGAGCAGGGAAAAACCTGGCTTAAACAAAAA | + |
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Preference number: 1 (lower is better) Translates to: LSAYKLPMFKQGKIK*AHHNEQGKTWLKQK Trigger: TTTTTGTTTAAGCCAGGTTTTTCCCTGCTCATTGTGATGTGCCCATTTTATCTTCCCTTGTTTGAACATTGGTAGTTTATATGCACTTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| 3UTR-3UTR TCA 90 bp | TCAACCTTTAGAAAGCTCATGGGAACAATGTGGCAGTACACACAGTTCTCGGTGTCAAACATATCAAGCTaGTTCCATGGGACCTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: STFRKLMGTMWQYTQFSVSNISS*FHGTCD Trigger: GTCACAGGTCCCATGGAATCAGCTTGATATGTTTGA...CACCGAGAACTGTGTGTACTGCCACATTGTTCCCATGAGCTTTCTAAAGGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| 3UTR-3UTR CCA 90 bp | GTTCAAGTGCACACATACCGAAATATGCTGGCCAAACTCTCAAGGCTTCTTCTTCTCATGGGAACAATGTaGCAGTACACACAGTTCTCG | + |
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Preference number: 2 (lower is better) Translates to: VQVHTYRNMLAKLSRLLLLMGTM*QYTQFS Trigger: CGAGAACTGTGTGTACTGCCACATTGTTCCCATGAG...AAGAAGAAGCCTTGAGAGTTTGGCCAGCATATTTCGGTATGTGTGCACTTGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| 3UTR-3UTR CCA 90 bp | GTTCAAGTGCACACATACCGAAATATGCTGGCCAAACTCTCAAGGCTTCTTCTTTGTCCACAAAGGTGGTaGGATCCTTTCTCTACTCAG | + |
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Preference number: 2 (lower is better) Translates to: VQVHTYRNMLAKLSRLLLCPQRW*DPFSTQ Trigger: CTGAGTAGAGAAAGGATCCCACCACCTTTGTGGACA...AAGAAGAAGCCTTGAGAGTTTGGCCAGCATATTTCGGTATGTGTGCACTTGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| 3UTR-3UTR TCA 90 bp | GTTCAAGTGCACACATACCGAAATATGCTGGCCAAACTCTCAAGGCTTCTTCTTTCAAACATATCAAGCTaGTTCCATGGGACCTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: VQVHTYRNMLAKLSRLLLSNISS*FHGTCD Trigger: GTCACAGGTCCCATGGAATCAGCTTGATATGTTTGA...AAGAAGAAGCCTTGAGAGTTTGGCCAGCATATTTCGGTATGTGTGCACTTGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| 3UTR-3UTR CCA 90 bp | GTTCAAGTGCACACATACCGAAATATGCTGGCCAAACTCTCAAGGCTTCTTCTTCCTTTAGAAAGCTCATaGGAACAATGTGGCAGTACA | + |
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Preference number: 2 (lower is better) Translates to: VQVHTYRNMLAKLSRLLLPLESS*EQCGST Trigger: TGTACTGCCACATTGTTCCCATGAGCTTTCTAAAGG...AAGAAGAAGCCTTGAGAGTTTGGCCAGCATATTTCGGTATGTGTGCACTTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| 3UTR-3UTR TCA 90 bp | GTTCAAGTGCACACATACCGAAATATGCTGGCCAAACTCTCAAGGCTTCTTCTTTTCACATATTGTAGTTaGTTGAGGAGAGGAGACAGA | + |
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Preference number: 2 (lower is better) Translates to: VQVHTYRNMLAKLSRLLLFTYCS*LRRGDR Trigger: TCTGTCTCCTCTCCTCAATCAACTACAATATGTGAA...AAGAAGAAGCCTTGAGAGTTTGGCCAGCATATTTCGGTATGTGTGCACTTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| 3UTR-3UTR TCA 90 bp | GTTCAAGTGCACACATACCGAAATATGCTGGCCAAACTCTCAAGGCTTCTTCTTAAAAACAAATGGCTGTaGCAATTTTCAGGGTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: VQVHTYRNMLAKLSRLLLKNKWL*QFSGSY Trigger: GTAAGACCCTGAAAATTGTCACAGCCATTTGTTTTT...AAGAAGAAGCCTTGAGAGTTTGGCCAGCATATTTCGGTATGTGTGCACTTGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| 3UTR-3UTR CCA 90 bp | GTTCAAGTGCACACATACCGAAATATGCTGGCCAAACTCTCAAGGCTTCTTCTTGGGTCTTACTTAGTATaGTCACATTCACAATTTTCA | + |
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Preference number: 2 (lower is better) Translates to: VQVHTYRNMLAKLSRLLLGSYLV*SHSQFS Trigger: TGAAAATTGTGAATGTGACCATACTAAGTAAGACCC...AAGAAGAAGCCTTGAGAGTTTGGCCAGCATATTTCGGTATGTGTGCACTTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| 3UTR-3UTR CCA 90 bp | GTTCAAGTGCACACATACCGAAATATGCTGGCCAAACTCTCAAGGCTTCTTCTTTGGTGTTTGAGACACTaGATGATTAATCTGCATATT | + |
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Preference number: 2 (lower is better) Translates to: VQVHTYRNMLAKLSRLLLWCLRH*MINLHI Trigger: AATATGCAGATTAATCATCCAGTGTCTCAAACACCA...AAGAAGAAGCCTTGAGAGTTTGGCCAGCATATTTCGGTATGTGTGCACTTGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| 3UTR CCA 72 bp | GGAACACAGTTCAAGTGCACACATACCGAAATATGCTaGCCAAACTCTCAAGGCTTCTTCTTTATGATTGGC | + |
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Preference number: 3 (lower is better) Translates to: GTQFKCTHTEIC*PNSQGFFFMIG Trigger: GCCAATCATAAAGAAGAAGCCTTGAGAGTTTGGCCAGCATATTTCGGTATGTGTGCACTTGAACTGTGTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| 3UTR-3UTR CAA 90 bp | GTTCAAGTGCACACATACCGAAATATGCTGGCCAAACTCTCAAGGCTTCTTCTTGTCCAACTTTGGTGTTaGAGACACTGGATGATTAAT | + |
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Preference number: 3 (lower is better) Translates to: VQVHTYRNMLAKLSRLLLVQLWC*RHWMIN Trigger: ATTAATCATCCAGTGTCTCAAACACCAAAGTTGGAC...AAGAAGAAGCCTTGAGAGTTTGGCCAGCATATTTCGGTATGTGTGCACTTGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| 3UTR GCA 72 bp | CAAGGAACACAGTTCAAGTGCACACATACCGAAATATaGTGGCCAAACTCTCAAGGCTTCTTCTTTATGATT | + |
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Preference number: 3 (lower is better) Translates to: QGTQFKCTHTEI*WPNSQGFFFMI Trigger: AATCATAAAGAAGAAGCCTTGAGAGTTTGGCCAGCATATTTCGGTATGTGTGCACTTGAACTGTGTTCCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| 3UTR TCA 72 bp | AACTTTCCCATCAGAAATTCATTCAACCACAGGTTCTaGTGTGTTGTGTGCTCATTTTCATTTGAACACAGA | + |
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Preference number: 3 (lower is better) Translates to: NFPIRNSFNHRF*CVVCSFSFEHR Trigger: TCTGTGTTCAAATGAAAATGAGCACACAACACATCAGAACCTGTGGTTGAATGAATTTCTGATGGGAAAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| 3UTR GCA 72 bp | ATGAGCAGGGAAAAACCTGGCTTAAACAAAAATACCTaGCAGGTATCTGTACATTCTTCTGTGTTGTTTATA | + |
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Preference number: 3 (lower is better) Translates to: MSREKPGLNKNT*QVSVHSSVLFI Trigger: TATAAACAACACAGAAGAATGTACAGATACCTGGCAGGTATTTTTGTTTAAGCCAGGTTTTTCCCTGCTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| 3UTR GCA 72 bp | AGAAGCATCCTTCATAATTGTTTGTGTTGTAGATACTaGTGTACCACCATCCTCATTTTCATAATCACACTA | + |
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Preference number: 3 (lower is better) Translates to: RSILHNCLCCRY*CTTILIFIITL Trigger: TAGTGTGATTATGAAAATGAGGATGGTGGTACAGCAGTATCTACAACACAAACAATTATGAAGGATGCTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS-3UTR CCA 90 bp | TCAACCTTTAGAAAGCTCATGGGAACAATGTGGCAGTACACACAGTTCTCGGTGATCGGAGTGTGGAGGTaGGAGAACGAGCTGACAATC | + |
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Preference number: 4 (lower is better) Translates to: STFRKLMGTMWQYTQFSVIGVWR*ENELTI Trigger: GATTGTCAGCTCGTTCTCCCACCTCCACACTCCGAT...CACCGAGAACTGTGTGTACTGCCACATTGTTCCCATGAGCTTTCTAAAGGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS-3UTR TCA 90 bp | TCAACCTTTAGAAAGCTCATGGGAACAATGTGGCAGTACACACAGTTCTCGGTGAAAGGAACAACCCACTaGGAAAGGGCTGCAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: STFRKLMGTMWQYTQFSVKGTTH*ERAAVL Trigger: CAGAACTGCAGCCCTTTCTCAGTGGGTTGTTCCTTT...CACCGAGAACTGTGTGTACTGCCACATTGTTCCCATGAGCTTTCTAAAGGTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS-3UTR CCA 90 bp | GTTCAAGTGCACACATACCGAAATATGCTGGCCAAACTCTCAAGGCTTCTTCTTATCGGAGTGTGGAGGTaGGAGAACGAGCTGACAATC | + |
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Preference number: 4 (lower is better) Translates to: VQVHTYRNMLAKLSRLLLIGVWR*ENELTI Trigger: GATTGTCAGCTCGTTCTCCCACCTCCACACTCCGAT...AAGAAGAAGCCTTGAGAGTTTGGCCAGCATATTTCGGTATGTGTGCACTTGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS-3UTR TCA 90 bp | GTTCAAGTGCACACATACCGAAATATGCTGGCCAAACTCTCAAGGCTTCTTCTTAAAGGAACAACCCACTaGGAAAGGGCTGCAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: VQVHTYRNMLAKLSRLLLKGTTH*ERAAVL Trigger: CAGAACTGCAGCCCTTTCTCAGTGGGTTGTTCCTTT...AAGAAGAAGCCTTGAGAGTTTGGCCAGCATATTTCGGTATGTGTGCACTTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS-3UTR GCA 90 bp | TCAACCTTTAGAAAGCTCATGGGAACAATGTGGCAGTACACACAGTTCTCGGTGCCACTGAGAAAGGGCTaGAGTTCTGGATCATCAGAT | + |
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Preference number: 4 (lower is better) Translates to: STFRKLMGTMWQYTQFSVPLRKG*SSGSSD Trigger: ATCTGATGATCCAGAACTGCAGCCCTTTCTCAGTGG...CACCGAGAACTGTGTGTACTGCCACATTGTTCCCATGAGCTTTCTAAAGGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS-3UTR TCA 90 bp | TCAACCTTTAGAAAGCTCATGGGAACAATGTGGCAGTACACACAGTTCTCGGTGAAGGCAACCAAATTGTaGAGCAGGGACTCAAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: STFRKLMGTMWQYTQFSVKATKL*SRDSKR Trigger: CCTTTTTGAGTCCCTGCTTCACAATTTGGTTGCCTT...CACCGAGAACTGTGTGTACTGCCACATTGTTCCCATGAGCTTTCTAAAGGTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS-3UTR GCA 90 bp | GTTCAAGTGCACACATACCGAAATATGCTGGCCAAACTCTCAAGGCTTCTTCTTCCACTGAGAAAGGGCTaGAGTTCTGGATCATCAGAT | + |
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Preference number: 4 (lower is better) Translates to: VQVHTYRNMLAKLSRLLLPLRKG*SSGSSD Trigger: ATCTGATGATCCAGAACTGCAGCCCTTTCTCAGTGG...AAGAAGAAGCCTTGAGAGTTTGGCCAGCATATTTCGGTATGTGTGCACTTGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS-3UTR CCA 90 bp | TCAACCTTTAGAAAGCTCATGGGAACAATGTGGCAGTACACACAGTTCTCGGTGAAAGGGCTGCAGTTCTaGATCATCAGATACTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: STFRKLMGTMWQYTQFSVKGLQF*IIRYSQ Trigger: CTGAGAGTATCTGATGATCCAGAACTGCAGCCCTTT...CACCGAGAACTGTGTGTACTGCCACATTGTTCCCATGAGCTTTCTAAAGGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS-3UTR TCA 90 bp | TCAACCTTTAGAAAGCTCATGGGAACAATGTGGCAGTACACACAGTTCTCGGTGACTGGACTGTGGATTTaGAGCTCTGCAATCATGTTT | + |
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Preference number: 4 (lower is better) Translates to: STFRKLMGTMWQYTQFSVTGLWI*SSAIMF Trigger: AAACATGATTGCAGAGCTTCAAATCCACAGTCCAGT...CACCGAGAACTGTGTGTACTGCCACATTGTTCCCATGAGCTTTCTAAAGGTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS-3UTR GCA 90 bp | TCAACCTTTAGAAAGCTCATGGGAACAATGTGGCAGTACACACAGTTCTCGGTGGTGGATTTGAAGCTCTaGAATCATGTTTGGGACTGT | + |
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Preference number: 4 (lower is better) Translates to: STFRKLMGTMWQYTQFSVVDLKL*NHVWDC Trigger: ACAGTCCCAAACATGATTGCAGAGCTTCAAATCCAC...CACCGAGAACTGTGTGTACTGCCACATTGTTCCCATGAGCTTTCTAAAGGTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS-3UTR CCA 90 bp | GTTCAAGTGCACACATACCGAAATATGCTGGCCAAACTCTCAAGGCTTCTTCTTAAAGGGCTGCAGTTCTaGATCATCAGATACTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: VQVHTYRNMLAKLSRLLLKGLQF*IIRYSQ Trigger: CTGAGAGTATCTGATGATCCAGAACTGCAGCCCTTT...AAGAAGAAGCCTTGAGAGTTTGGCCAGCATATTTCGGTATGTGTGCACTTGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS-3UTR CCA 90 bp | GTTCAAGTGCACACATACCGAAATATGCTGGCCAAACTCTCAAGGCTTCTTCTTCACGTAGGATATGACTaGACTGTGGATTTGAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: VQVHTYRNMLAKLSRLLLHVGYD*TVDLKL Trigger: GAGCTTCAAATCCACAGTCCAGTCATATCCTACGTG...AAGAAGAAGCCTTGAGAGTTTGGCCAGCATATTTCGGTATGTGTGCACTTGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS-3UTR TCA 90 bp | GTTCAAGTGCACACATACCGAAATATGCTGGCCAAACTCTCAAGGCTTCTTCTTACTGGACTGTGGATTTaGAGCTCTGCAATCATGTTT | + |
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Preference number: 4 (lower is better) Translates to: VQVHTYRNMLAKLSRLLLTGLWI*SSAIMF Trigger: AAACATGATTGCAGAGCTTCAAATCCACAGTCCAGT...AAGAAGAAGCCTTGAGAGTTTGGCCAGCATATTTCGGTATGTGTGCACTTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS-3UTR TCA 90 bp | TCAACCTTTAGAAAGCTCATGGGAACAATGTGGCAGTACACACAGTTCTCGGTGTTTATACCTCCCACTTaGAGAGGTGATTCTCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: STFRKLMGTMWQYTQFSVFIPPT*RGDSQN Trigger: ATTCTGAGAATCACCTCTTCAAGTGGGAGGTATAAA...CACCGAGAACTGTGTGTACTGCCACATTGTTCCCATGAGCTTTCTAAAGGTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS-3UTR GCA 90 bp | GTTCAAGTGCACACATACCGAAATATGCTGGCCAAACTCTCAAGGCTTCTTCTTGTGGATTTGAAGCTCTaGAATCATGTTTGGGACTGT | + |
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Preference number: 4 (lower is better) Translates to: VQVHTYRNMLAKLSRLLLVDLKL*NHVWDC Trigger: ACAGTCCCAAACATGATTGCAGAGCTTCAAATCCAC...AAGAAGAAGCCTTGAGAGTTTGGCCAGCATATTTCGGTATGTGTGCACTTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS-3UTR TCA 90 bp | GTTCAAGTGCACACATACCGAAATATGCTGGCCAAACTCTCAAGGCTTCTTCTTTTTATACCTCCCACTTaGAGAGGTGATTCTCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: VQVHTYRNMLAKLSRLLLFIPPT*RGDSQN Trigger: ATTCTGAGAATCACCTCTTCAAGTGGGAGGTATAAA...AAGAAGAAGCCTTGAGAGTTTGGCCAGCATATTTCGGTATGTGTGCACTTGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS-3UTR GCA 90 bp | TCAACCTTTAGAAAGCTCATGGGAACAATGTGGCAGTACACACAGTTCTCGGTGGAAGAAATTGGCAATTaGCACATCTTTGAAACACTT | + |
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Preference number: 4 (lower is better) Translates to: STFRKLMGTMWQYTQFSVEEIGN*HIFETL Trigger: AAGTGTTTCAAAGATGTGGCAATTGCCAATTTCTTC...CACCGAGAACTGTGTGTACTGCCACATTGTTCCCATGAGCTTTCTAAAGGTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS-3UTR CAA 90 bp | TCAACCTTTAGAAAGCTCATGGGAACAATGTGGCAGTACACACAGTTCTCGGTGGCAATTGCCACATCTTaGAAACACTTAAGTTGTAAG | + |
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Preference number: 5 (lower is better) Translates to: STFRKLMGTMWQYTQFSVAIATS*KHLSCK Trigger: CTTACAACTTAAGTGTTTCAAAGATGTGGCAATTGC...CACCGAGAACTGTGTGTACTGCCACATTGTTCCCATGAGCTTTCTAAAGGTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS-3UTR CAA 90 bp | GTTCAAGTGCACACATACCGAAATATGCTGGCCAAACTCTCAAGGCTTCTTCTTGCAATTGCCACATCTTaGAAACACTTAAGTTGTAAG | + |
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Preference number: 5 (lower is better) Translates to: VQVHTYRNMLAKLSRLLLAIATS*KHLSCK Trigger: CTTACAACTTAAGTGTTTCAAAGATGTGGCAATTGC...AAGAAGAAGCCTTGAGAGTTTGGCCAGCATATTTCGGTATGTGTGCACTTGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS CAA 72 bp | GAGGCAGCCCACGTAGGATATGACTGGACTGTGGATTaGAAGCTCTGCAATCATGTTTGGGACTGTTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: EAAHVGYDWTVD*KLCNHVWDCCR Trigger: TCTACAACAGTCCCAAACATGATTGCAGAGCTTCAAATCCACAGTCCAGTCATATCCTACGTGGGCTGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS GCA 72 bp | CACGTAGGATATGACTGGACTGTGGATTTGAAGCTCTaGAATCATGTTTGGGACTGTTGTAGAAATGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: HVGYDWTVDLKL*NHVWDCCRNEA Trigger: GGCTTCATTTCTACAACAGTCCCAAACATGATTGCAGAGCTTCAAATCCACAGTCCAGTCATATCCTACGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS CCA 72 bp | GACTGGACTGTGGATTTGAAGCTCTGCAATCATGTTTaGGACTGTTGTAGAAATGAAGCCAATGTCAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: DWTVDLKLCNHV*DCCRNEANVSQ Trigger: TTGGCTGACATTGGCTTCATTTCTACAACAGTCCCAAACATGATTGCAGAGCTTCAAATCCACAGTCCAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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| CDS TCA 72 bp | TACATTAATGAGGCCACCACATTGTTTCCAGAAGAATaGGACAAAAGTGAGCCAAAATACTCTCCAAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: YINEATTLFPEE*DKSEPKYSPSP Trigger: AGGGCTTGGAGAGTATTTTGGCTCACTTTTGTCTCATTCTTCTGGAAACAATGTGGTGGCCTCATTAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212767.4 ENSMUST00000212999.4 |
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