Pregenerated sensors for OLFR860 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066905Ensembl transcript IDs: ENSMUST00000086482.4, ENSMUST00000211924.2, ENSMUST00000212353.2
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TTATATGTTCACAAACCAGGCCACAATAAAGCTATAACATGTAACTaGAACAGGCACAGCAAGATACATTTAGATTCACTACATGTATGC | + |
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Preference number: 2 (lower is better) Translates to: LYVHKPGHNKAITCN*NRHSKIHLDSLHVC Trigger: GCATACATGTAGTGAATCTAAATGTATCTTGCTGTGCCTGTTCAAGTTACATGTTATAGCTTTATTGTGGCCTGGTTTGTGAACATATAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086482.4 |
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| 3UTR-3UTR CAA 90 bp | TCCCAAGAAAATATATACTGCAAATTTCTGCTCCATGAAATTCAAGACAGCAACGCTATAACATGTAACTaGAACAGGCACAGCAAGATA | + |
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Preference number: 3 (lower is better) Translates to: SQENIYCKFLLHEIQDSNAITCN*NRHSKI Trigger: TATCTTGCTGTGCCTGTTCAAGTTACATGTTATAGC...GTTGCTGTCTTGAATTTCATGGAGCAGAAATTTGCAGTATATATTTTCTTGGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086482.4 |
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| CDS-3UTR TCA 90 bp | TATGTTCACAAACCAGGCCACAATAAAGCTATAACATGTAACTTGAACAGGCACGGATGGTGGTGCTGCTaGAGCCCATGTCAGACAATG | + |
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Preference number: 4 (lower is better) Translates to: YVHKPGHNKAITCNLNRHGWWCC*SPCQTM Trigger: CATTGTCTGACATGGGCTTCAGCAGCACCACCATCC...GTGCCTGTTCAAGTTACATGTTATAGCTTTATTGTGGCCTGGTTTGTGAACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086482.4 |
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| CDS-3UTR TCA 90 bp | TATGTTCACAAACCAGGCCACAATAAAGCTATAACATGTAACTTGAACAGGCACGGAGTAAAAGATTCCTaGGGCAGGGAGGAATCCAAC | + |
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Preference number: 4 (lower is better) Translates to: YVHKPGHNKAITCNLNRHGVKDS*GREESN Trigger: GTTGGATTCCTCCCTGCCTCAGGAATCTTTTACTCC...GTGCCTGTTCAAGTTACATGTTATAGCTTTATTGTGGCCTGGTTTGTGAACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086482.4 |
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| CDS-3UTR TCA 90 bp | TCCCAAGAAAATATATACTGCAAATTTCTGCTCCATGAAATTCAAGACAGCAACTCTGTAGGGCCTTTTTaGTATCCTTGTTCCTCAAGC | + |
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Preference number: 4 (lower is better) Translates to: SQENIYCKFLLHEIQDSNSVGPF*YPCSSS Trigger: GCTTGAGGAACAAGGATATCAAAAAGGCCCTACAGA...GTTGCTGTCTTGAATTTCATGGAGCAGAAATTTGCAGTATATATTTTCTTGGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086482.4 |
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| CDS-3UTR CCA 90 bp | TATGTTCACAAACCAGGCCACAATAAAGCTATAACATGTAACTTGAACAGGCACGTTATGGTTCTGTTATaGGCATGCAAGTTTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YVHKPGHNKAITCNLNRHVMVLL*ACKFIS Trigger: GCTGATAAACTTGCATGCCCATAACAGAACCATAAC...GTGCCTGTTCAAGTTACATGTTATAGCTTTATTGTGGCCTGGTTTGTGAACATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086482.4 |
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| CDS-3UTR CCA 90 bp | TATGTTCACAAACCAGGCCACAATAAAGCTATAACATGTAACTTGAACAGGCACTCATGGGAACCACCATaGTATACATTACTGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: YVHKPGHNKAITCNLNRHSWEPP*YTLLKS Trigger: TGACTTCAGTAATGTATACCATGGTGGTTCCCATGA...GTGCCTGTTCAAGTTACATGTTATAGCTTTATTGTGGCCTGGTTTGTGAACATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086482.4 |
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| CDS-3UTR GCA 90 bp | TATGTTCACAAACCAGGCCACAATAAAGCTATAACATGTAACTTGAACAGGCACGTTCTGTTATGGGCATaGAAGTTTATCAGCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YVHKPGHNKAITCNLNRHVLLWA*KFISIL Trigger: CAAAATGCTGATAAACTTGCATGCCCATAACAGAAC...GTGCCTGTTCAAGTTACATGTTATAGCTTTATTGTGGCCTGGTTTGTGAACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086482.4 |
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| 3UTR CAA 72 bp | CACAAACCAGGCCACAATAAAGCTATAACATGTAACTaGAACAGGCACAGCAAGATACATTTAGATTCACTA | + |
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Preference number: 4 (lower is better) Translates to: HKPGHNKAITCN*NRHSKIHLDSL Trigger: TAGTGAATCTAAATGTATCTTGCTGTGCCTGTTCAAGTTACATGTTATAGCTTTATTGTGGCCTGGTTTGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086482.4 |
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| CDS CAA 72 bp | ATGGTTCTGTTATGGGCATGCAAGTTTATCAGCATTTaGGGGATGGTGGTGCTGCTGAAGCCCATGTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: MVLLWACKFISI*GMVVLLKPMSD Trigger: GTCTGACATGGGCTTCAGCAGCACCACCATCCCCAAAATGCTGATAAACTTGCATGCCCATAACAGAACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086482.4 ENSMUST00000211924.2 ENSMUST00000212353.2 |
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| CDS CAA 90 bp | ATGGGAACCACCATGGTATACATTACTGAAGTCACCACACTTTCCTaGGAAGAACTAGAAATAGATGAGCTAAGGTATACACCAAGACCT | + |
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Preference number: 6 (lower is better) Translates to: MGTTMVYITEVTTLS*EELEIDELRYTPRP Trigger: AGGTCTTGGTGTATACCTTAGCTCATCTATTTCTAGTTCTTCCAAGGAAAGTGTGGTGACTTCAGTAATGTATACCATGGTGGTTCCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086482.4 ENSMUST00000212353.2 |
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| CDS TCA 72 bp | GGAGGAAATAATCTTATAGTAGGAGTAAAAGATTCCTaGGGCAGGGAGGAATCCAACAATGATACTGACAAG | + |
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Preference number: 6 (lower is better) Translates to: GGNNLIVGVKDS*GREESNNDTDK Trigger: CTTGTCAGTATCATTGTTGGATTCCTCCCTGCCTCAGGAATCTTTTACTCCTACTATAAGATTATTTCCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086482.4 ENSMUST00000212353.2 |
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| CDS CAA 72 bp | ACCATGGTATACATTACTGAAGTCACCACACTTTCCTaGGAAGAACTAGAAATAGATGAGCTAAGGTATACA | + |
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Preference number: 6 (lower is better) Translates to: TMVYITEVTTLS*EELEIDELRYT Trigger: TGTATACCTTAGCTCATCTATTTCTAGTTCTTCCAAGGAAAGTGTGGTGACTTCAGTAATGTATACCATGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086482.4 ENSMUST00000212353.2 |
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