RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR859 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095448

Ensembl transcript IDs: ENSMUST00000086480.2, ENSMUST00000212540.3, ENSMUST00000217280.2

Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCGAGAGTGGGCAAGCAGGCCATGCCCCAGGAATTTGTCCCTGGTaGAGAAAGGGCAACCACTGGGCTAAGGTGTGCAAATCCAAGCCA +
Preference number: 1 (lower is better)
Translates to: AESGQAGHAPGICPW*RKGNHWAKVCKSKP
Trigger: TGGCTTGGATTTGCACACCTTAGCCCAGTGGTTGCCCTTTCTGCACCAGGGACAAATTCCTGGGGCATGGCCTGCTTGCCCACTCTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 90 bp GGTGCCGAGAGTGGGCAAGCAGGCCATGCCCCAGGAATTTGTCCCTaGTGCAGAAAGGGCAACCACTGGGCTAAGGTGTGCAAATCCAAG +
Preference number: 1 (lower is better)
Translates to: GAESGQAGHAPGICP*CRKGNHWAKVCKSK
Trigger: CTTGGATTTGCACACCTTAGCCCAGTGGTTGCCCTTTCTGCACCAGGGACAAATTCCTGGGGCATGGCCTGCTTGCCCACTCTCGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 90 bp CCAGAGGCTAAGCTGCCAGCCAAAGAGCCTACATGGGCTGGTCTGTaGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTC +
Preference number: 1 (lower is better)
Translates to: PEAKLPAKEPTWAGL*TLLHMRQRTALLHL
Trigger: GAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGACCAGCCCATGTAGGCTCTTTGGCTGGCAGCTTAGCCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR GCA 90 bp GGAATTTGTCCCTGGTGCAGAAAGGGCAACCACTGGGCTAAGGTGTaGAAATCCAAGCCAGGCACTCTGGGCCATCCAGTGCCGGGAAAA +
Preference number: 1 (lower is better)
Translates to: GICPWCRKGNHWAKV*KSKPGTLGHPVPGK
Trigger: TTTTCCCGGCACTGGATGGCCCAGAGTGCCTGGCTTGGATTTGCACACCTTAGCCCAGTGGTTGCCCTTTCTGCACCAGGGACAAATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR TCA 90 bp AAGTTTGTGGCACTAGCCATTCAGCCTCCCAGGACCCAGTGGAGATaGCCTCAGCCAAAATGCCCAACAGTAGGTAGATGGAACCTAAAG +
Preference number: 1 (lower is better)
Translates to: KFVALAIQPPRTQWR*PQPKCPTVGRWNLK
Trigger: CTTTAGGTTCCATCTACCTACTGTTGGGCATTTTGGCTGAGGTCATCTCCACTGGGTCCTGGGAGGCTGAATGGCTAGTGCCACAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR GCA 90 bp AAATCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTaGAAGGGACTGCCATACAAGCAATGTTCTCGCGGAAATGAGGGA +
Preference number: 1 (lower is better)
Translates to: KSGRHIIRVWLSVLL*KGLPYKQCSRGNEG
Trigger: TCCCTCATTTCCGCGAGAACATTGCTTGTATGGCAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 90 bp ATGTCCATCTTTGTGCAGAAATCGGGCCGTCATATAATCAGGGTTTaGCTTTCAGTGCTGCTTTGCAAGGGACTGCCATACAAGCAATGT +
Preference number: 1 (lower is better)
Translates to: MSIFVQKSGRHIIRV*LSVLLCKGLPYKQC
Trigger: ACATTGCTTGTATGGCAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGATTTCTGCACAAAGATGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR TCA 90 bp TCTTTTCTCTCTCCAAGGAGTAACTCTTCTGAAATGCACCAAGCTTaGCTGCAAAGAACTGTGAGTCAGGCTTGTGGGAGAGGACACAAT +
Preference number: 1 (lower is better)
Translates to: SFLSPRSNSSEMHQA*LQRTVSQACGRGHN
Trigger: ATTGTGTCCTCTCCCACAAGCCTGACTCACAGTTCTTTGCAGTCAAGCTTGGTGCATTTCAGAAGAGTTACTCCTTGGAGAGAGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 90 bp ATTAACCCCAGAAATAGGAGTCCAAACTCTGCCTACCGGAGTCTTTaGACCTCTACCTGTAGAAACTTGTGGATTTCTTTTAGGACGAAG +
Preference number: 1 (lower is better)
Translates to: INPRNRSPNSAYRSL*TSTCRNLWISFRTK
Trigger: CTTCGTCCTAAAAGAAATCCACAAGTTTCTACAGGTAGAGGTCCAAAGACTCCGGTAGGCAGAGTTTGGACTCCTATTTCTGGGGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 90 bp AAGGCCACCCTGTCAGGAGGAGATTTCTTACTTTGGGATTCTGAATaGCGAGATGCCAGTAAGAAAACTGCCAATTTAAATGCTCAGACT +
Preference number: 1 (lower is better)
Translates to: KATLSGGDFLLWDSE*RDASKKTANLNAQT
Trigger: AGTCTGAGCATTTAAATTGGCAGTTTTCTTACTGGCATCTCGCCATTCAGAATCCCAAAGTAAGAAATCTCCTCCTGACAGGGTGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR TCA 90 bp CTGATGCTATATTGTGCTTGTAGACAGGAACCTAGCCTGGCTGTCTaGGAGGTCTATCAGCAACTGACTGAGATAGATGCAATATACTTA +
Preference number: 1 (lower is better)
Translates to: LMLYCACRQEPSLAV*EVYQQLTEIDAIYL
Trigger: TAAGTATATTGCATCTATCTCAGTCAGTTGCTGATAGACCTCTCAGACAGCCAGGCTAGGTTCCTGTCTACAAGCACAATATAGCATCAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 90 bp AGTAAGAAAACTGCCAATTTAAATGCTCAGACTGGTAATCTAGACTaGGATAGTAGCATGCTTCTGGGAGAAGGCCTTTATAAGGGCCAG +
Preference number: 1 (lower is better)
Translates to: SKKTANLNAQTGNLD*DSSMLLGEGLYKGQ
Trigger: CTGGCCCTTATAAAGGCCTTCTCCCAGAAGCATGCTACTATCCCAGTCTAGATTACCAGTCTGAGCATTTAAATTGGCAGTTTTCTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR TCA 90 bp GCTGCTTTGCAAGGGACTGCCATACAAGCAATGTTCTCGCGGAAATaGGGGAATAATGCATGTTTTAAATGTGGAAATTTGGGTCATTTT +
Preference number: 1 (lower is better)
Translates to: AALQGTAIQAMFSRK*GNNACFKCGNLGHF
Trigger: AAAATGACCCAAATTTCCACATTTAAAACATGCATTATTCCCTCATTTCCGCGAGAACATTGCTTGTATGGCAGTCCCTTGCAAAGCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 90 bp CACTTGTTAACATACAATAGTCATTCAATTAGATGTTTGCCAGGCTaGACACCCTTTTGGTTGCTTGCCATTTCCTATAAATCCTTGTGC +
Preference number: 1 (lower is better)
Translates to: HLLTYNSHSIRCLPG*TPFWLLAISYKSLC
Trigger: GCACAAGGATTTATAGGAAATGGCAAGCAACCAAAAGGGTGTCCAGCCTGGCAAACATCTAATTGAATGACTATTGTATGTTAACAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 90 bp ATAGCAATTCAAAACAGTGATACCCAAACCAAGTTATACTATTTCTaGATGCATTCTTTGGCGTGTAAAAACATGTGCAGTGCCAATTTA +
Preference number: 1 (lower is better)
Translates to: IAIQNSDTQTKLYYF*MHSLACKNMCSANL
Trigger: TAAATTGGCACTGCACATGTTTTTACACGCCAAAGAATGCATCCAGAAATAGTATAACTTGGTTTGGGTATCACTGTTTTGAATTGCTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp GCTGGTCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCTGGAGGGTTTGGGGCTaGTGCATCAAACTGTCCTGC +
Preference number: 2 (lower is better)
Translates to: AGLWTLLHMRQRTALLHLWRVWG*CIKLSC
Trigger: GCAGGACAGTTTGATGCAGCAGCCCCAAACCCTCCA...GAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGCCAAGCCAGGCACTCTaGGCCATCCAGTGCCGGGAA +
Preference number: 2 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLPSQAL*AIQCRE
Trigger: TTCCCGGCACTGGATGGCCCAGAGTGCCTGGCTTGG...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGGCCAAAGAGCCTACATaGGCTGGTCTGTGGACCCTG +
Preference number: 2 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLAKEPT*AGLWTL
Trigger: CAGGGTCCACAGACCAGCCCATGTAGGCTCTTTGGC...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp ACACACAGAATGCAGTGGCTGCCTGCCTTGCTTGGGGACTGTTACTGGTTAGAGGGGACCTTTACAACCTaGGCTTCCCTCCCCAGTAAC +
Preference number: 2 (lower is better)
Translates to: THRMQWLPALLGDCYWLEGTFTT*ASLPSN
Trigger: GTTACTGGGGAGGGAAGCCCAGGTTGTAAAGGTCCC...CTCTAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp ACACACAGAATGCAGTGGCTGCCTGCCTTGCTTGGGGACTGTTACTGGTTAGAGGGACTAGCCGTCCAGTaGCTGGCACAAATTGGTATC +
Preference number: 2 (lower is better)
Translates to: THRMQWLPALLGDCYWLEGLAVQ*LAQIGI
Trigger: GATACCAATTTGTGCCAGTCACTGGACGGCTAGTCC...CTCTAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp GCTGGTCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCTGGCATGATGAATTCTaGGAGGTAGGACCTCGAAGA +
Preference number: 2 (lower is better)
Translates to: AGLWTLLHMRQRTALLHLWHDEF*EVGPRR
Trigger: TCTTCGAGGTCCTACCTCCCAGAATTCATCATGCCA...GAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp GCTGGTCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCCCTCTAGCTGGAAAATaGTATCAGTGGCCCCATAAT +
Preference number: 2 (lower is better)
Translates to: AGLWTLLHMRQRTALLHLPLAGK*YQWPHN
Trigger: ATTATGGGGCCACTGATAGCATTTTCCAGCTAGAGG...GAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGGACAGGAACCTAGCCTaGCTGTCTGAGAGGTCTATC +
Preference number: 2 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLDRNLA*LSERSI
Trigger: GATAGACCTCTCAGACAGCCAGGCTAGGTTCCTGTC...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp ACACACAGAATGCAGTGGCTGCCTGCCTTGCTTGGGGACTGTTACTGGTTAGAGAGCTGCTTCCCCTCATaGTGTTATAACTGTACCCGC +
Preference number: 2 (lower is better)
Translates to: THRMQWLPALLGDCYWLESCFPS*CYNCTR
Trigger: GCGGGTACAGTTATAACACCATGAGGGGAAGCAGCT...CTCTAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 90 bp TTTGGTTGCTTGCCATTTCCTATAAATCCTTGTGCCCTGGAGGGTTaGGGGCTGCTGCATCAAACTGTCCTGCTGTATCAGGGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: FGCLPFPINPCALEG*GLLHQTVLLYQGQL
Trigger: CAGCTGACCCTGATACAGCAGGACAGTTTGATGCAGCAGCCCCAAACCCTCCAGGGCACAAGGATTTATAGGAAATGGCAAGCAACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp TCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCAGTGGCCTCTAGCTGGAAAATaGTATCAGTGGCCCCATAAT +
Preference number: 2 (lower is better)
Translates to: SVDPATYEAEDCLASPQWPLAGK*YQWPHN
Trigger: ATTATGGGGCCACTGATAGCATTTTCCAGCTAGAGG...CCACTGAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp AGGAAGGACCCTAGGGATTATCCACTGAGCACACCCCAGATTTACTCCCTAGCTTCCTATAAATCCTTGTaGCCTGGAGGGTTTGGGGCT +
Preference number: 2 (lower is better)
Translates to: RKDPRDYPLSTPQIYSLASYKSL*PGGFGA
Trigger: AGCCCCAAACCCTCCAGGGCACAAGGATTTATAGGA...AGCTAGGGAGTAAATCTGGGGTGTGCTCAGTGGATAATCCCTAGGGTCCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp GCTGGTCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCTCTGGATGCATTCTTTaGCGTGTAAAAACATGTGCA +
Preference number: 2 (lower is better)
Translates to: AGLWTLLHMRQRTALLHLSGCIL*RVKTCA
Trigger: TGCACATGTTTTTACACGCCAAAGAATGCATCCAGA...GAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGTGGTTGCATCAGAGTTaGATCCTGGTGGTCTTTTGG +
Preference number: 2 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLWLHQS*ILVVFW
Trigger: CCAAAAGACCACCAGGATCCAACTCTGATGCAACCA...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp AGGAAGGACCCTAGGGATTATCCACTGAGCACACCCCAGATTTACTCCCTAGCTTGGTTGCATCAGAGTTaGATCCTGGTGGTCTTTTGG +
Preference number: 2 (lower is better)
Translates to: RKDPRDYPLSTPQIYSLAWLHQS*ILVVFW
Trigger: CCAAAAGACCACCAGGATCCAACTCTGATGCAACCA...AGCTAGGGAGTAAATCTGGGGTGTGCTCAGTGGATAATCCCTAGGGTCCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 90 bp GTCATTCAATTAGATGTTTGCCAGGCTGGACACCCTTTTGGTTGCTaGCCATTTCCTATAAATCCTTGTGCCCTGGAGGGTTTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: VIQLDVCQAGHPFGC*PFPINPCALEGLGL
Trigger: CAGCCCCAAACCCTCCAGGGCACAAGGATTTATAGGAAATGGCAAGCAACCAAAAGGGTGTCCAGCCTGGCAAACATCTAATTGAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGTTTCACATAAGCCATTaGGTCCAATTGCTGTTGCCC +
Preference number: 2 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLFHISH*VQLLLP
Trigger: GGGCAACAGCAATTGGACTCAATGGCTTATGTGAAA...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp GCTGGTCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCAATTTGACCTGTAGCTaGAACCAAGCTACATATAAG +
Preference number: 2 (lower is better)
Translates to: AGLWTLLHMRQRTALLHLNLTCS*NQATYK
Trigger: CTTATATGTAGCTTGGTTTCAGCTACAGGTCAAATT...GAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGAAGAGCCTGAGAATTTaGCCTGTAGCTGAAACCAAG +
Preference number: 2 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLKSLRI*PVAETK
Trigger: CTTGGTTTCAGCTACAGGTCAAATTCTCAGGCTCTT...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp TCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCAGTGGCATGATCAACTTGCCTaGAAGCAATTTACAGATCCA +
Preference number: 2 (lower is better)
Translates to: SVDPATYEAEDCLASPQWHDQLA*KQFTDP
Trigger: TGGATCTGTAAATTGCTTTCAGGCAAGTTGATCATG...CCACTGAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGCGCCAAGACTATTACTaGTGCCACGTTGTGTCTAAA +
Preference number: 2 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLRQDYY*CHVVSK
Trigger: TTTAGACACAACGTGGCATCAGTAATAGTCTTGGCG...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp ACACACAGAATGCAGTGGCTGCCTGCCTTGCTTGGGGACTGTTACTGGTTAGAGAATATCCAAAGAGCATaGATGGGCTGTTCAGAATCC +
Preference number: 2 (lower is better)
Translates to: THRMQWLPALLGDCYWLENIQRA*MGCSES
Trigger: GGATTCTGAACAGCCCATGCATGCTCTTTGGATATT...CTCTAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp TCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCAGTGGAGGTCACCAACAGATTaGGAAAGGATCTTTACCTAT +
Preference number: 2 (lower is better)
Translates to: SVDPATYEAEDCLASPQWRSPTD*ERIFTY
Trigger: ATAGGTAAAGATCCTTTCCCAATCTGTTGGTGACCT...CCACTGAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp GCTGGTCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCGCAAATTTGCACAACTaGTGGTTATCATGTAGAAGA +
Preference number: 2 (lower is better)
Translates to: AGLWTLLHMRQRTALLHLANLHN*WLSCRR
Trigger: TCTTCTACATGATAACCACCAGTTGTGCAAATTTGC...GAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGACACCTATGGTCACTTaGTCTTTGACAAGGGAGCTA +
Preference number: 2 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLTPMVT*SLTREL
Trigger: TAGCTCCCTTGTCAAAGACCAAGTGACCATAGGTGT...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 90 bp GCATGCTTCTGGGAGAAGGCCTTTATAAGGGCCAGACTAATCAGATaGATTTTCCTGTTGGAGTGTACACACAGAATGCAGTGGCTGCCT +
Preference number: 2 (lower is better)
Translates to: ACFWEKAFIRARLIR*IFLLECTHRMQWLP
Trigger: AGGCAGCCACTGCATTCTGTGTGTACACTCCAACAGGAAAATCAATCTGATTAGTCTGGCCCTTATAAAGGCCTTCTCCCAGAAGCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp TCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCAGTGGGGGCATTTATCCAGATaGCTCCAATTTGATATATCA +
Preference number: 2 (lower is better)
Translates to: SVDPATYEAEDCLASPQWGHLSR*LQFDIS
Trigger: TGATATATCAAATTGGAGTCATCTGGATAAATGCCC...CCACTGAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp TCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCAGTGGTGCCTGCATTTGATATaGCTCTCTTATTCTACAAAC +
Preference number: 2 (lower is better)
Translates to: SVDPATYEAEDCLASPQWCLHLI*LSYSTN
Trigger: GTTTGTAGAATAAGAGAGGCATATCAAATGCAGGCA...CCACTGAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGTCCCAAGAACAAAGGTaGCGAGAGTGGGCAAGCAGG +
Preference number: 2 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQSQEQR*REWASR
Trigger: CCTGCTTGCCCACTCTCGGCACCTTTGTTCTTGGGA...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp GCTGGTCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCTCCTTTCCTAATTTTTaGCCCCTAATCTATTTCAGT +
Preference number: 2 (lower is better)
Translates to: AGLWTLLHMRQRTALLHLSFPNF*PLIYFS
Trigger: ACTGAAATAGATTAGGGGCCAAAAATTAGGAAAGGA...GAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGACCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp AATCTGCTGCCCATCCAAAGAGATCAGTTTTTGAACTTGTCAGGGCAAAACCCGTCCAAAGAGCATGCATaGGCTGTTCAGAATCCCCTG +
Preference number: 2 (lower is better)
Translates to: NLLPIQRDQFLNLSGQNPSKEHA*AVQNPL
Trigger: CAGGGGATTCTGAACAGCCCATGCATGCTCTTTGGA...CGGGTTTTGCCCTGACAAGTTCAAAAACTGATCTCTTTGGATGGGCAGCAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGGGGACCTTTACAACCTaGGCTTCCCTCCCCAGTAAC +
Preference number: 2 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQGTFTT*ASLPSN
Trigger: GTTACTGGGGAGGGAAGCCCAGGTTGTAAAGGTCCC...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGACACACAGAATGCAGTaGCTGCCTGCCTTGCTTGGG +
Preference number: 2 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQTHRMQ*LPALLG
Trigger: CCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGT...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 90 bp TGTCAGACTTTGGATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTaGTGCAGTATGGTCCTTCAGCCCCTATCACACAAGCACTGCTGG +
Preference number: 2 (lower is better)
Translates to: CQTLDFRLIKELKQL*CSMVLQPLSHKHCW
Trigger: CCAGCAGTGCTTGTGTGATAGGGGCTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATCCAAAGTCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGCTCTCTGATTCTTGTTaGAGATATATTCTCTGCCTG +
Preference number: 2 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLLSDSC*RYILCL
Trigger: CAGGCAGAGAATATATCTTCAACAAGAATCAGAGAG...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp ACACACAGAATGCAGTGGCTGCCTGCCTTGCTTGGGGACTGTTACTGGTTAGAGAAGATAAAAACCACATaGTCAACTTGCCTGAAAGCA +
Preference number: 2 (lower is better)
Translates to: THRMQWLPALLGDCYWLEKIKTT*STCLKA
Trigger: TGCTTTCAGGCAAGTTGATCATGTGGTTTTTATCTT...CTCTAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp AGATTGAAGAAAAGGACAACCAGAGACTGGCCTACCTTAAAATTGATCCCATGTTGGAGGGTTTGGGGCTaGTGCATCAAACTGTCCTGC +
Preference number: 2 (lower is better)
Translates to: RLKKRTTRDWPTLKLIPCWRVWG*CIKLSC
Trigger: GCAGGACAGTTTGATGCAGCAGCCCCAAACCCTCCA...ACATGGGATCAATTTTAAGGTAGGCCAGTCTCTGGTTGTCCTTTTCTTCAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGGGACACCCTTTTGGTTaGTTGCCATTTCCTATAAAT +
Preference number: 2 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLGHPFG*LPFPIN
Trigger: ATTTATAGGAAATGGCAAGCAACCAAAAGGGTGTCC...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp ACACACAGAATGCAGTGGCTGCCTGCCTTGCTTGGGGACTGTTACTGGTTAGAGGGGATTATGGTAACTTaGCTTTACTATTTCAGGCAT +
Preference number: 2 (lower is better)
Translates to: THRMQWLPALLGDCYWLEGIMVT*LYYFRH
Trigger: ATGCCTGAAATAGTAAAGGCAAGTTACCATAATCCC...CTCTAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGAAGGTCAAGTCTAAGTaGATCAAGGAACTCCACATA +
Preference number: 2 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLKVKSK*IKELHI
Trigger: TATGTGGAGTTCCTTGATGCACTTAGACTTGACCTT...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp ACACACAGAATGCAGTGGCTGCCTGCCTTGCTTGGGGACTGTTACTGGTTAGAGGGCAATTTGCAAATTTaGACAACTGGTGGTTATCAT +
Preference number: 2 (lower is better)
Translates to: THRMQWLPALLGDCYWLEGNLQI*TTGGYH
Trigger: ATGATAACCACCAGTTGTGCAAATTTGCAAATTGCC...CTCTAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGAGTGTACACACAGAATaGAGTGGCTGCCTGCCTTGC +
Preference number: 2 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQSVHTE*SGCLPC
Trigger: GCAAGGCAGGCAGCCACTGCATTCTGTGTGTACACT...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp AATCTGCTGCCCATCCAAAGAGATCAGTTTTTGAACTTGTCAGGGCAAAACCCGGGCTGGACACCCTTTTaGTTGCTTGCCATTTCCTAT +
Preference number: 2 (lower is better)
Translates to: NLLPIQRDQFLNLSGQNPGWTPF*LLAISY
Trigger: ATAGGAAATGGCAAGCAACCAAAAGGGTGTCCAGCC...CGGGTTTTGCCCTGACAAGTTCAAAAACTGATCTCTTTGGATGGGCAGCAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp TGCTCAGAGTCTAAGCTAATATCCAAAGAGCATGCATGGGCTGTTCAGAATCCCGGCTGGACACCCTTTTaGTTGCTTGCCATTTCCTAT +
Preference number: 2 (lower is better)
Translates to: CSESKLISKEHAWAVQNPGWTPF*LLAISY
Trigger: ATAGGAAATGGCAAGCAACCAAAAGGGTGTCCAGCC...GGGATTCTGAACAGCCCATGCATGCTCTTTGGATATTAGCTTAGACTCTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp ACACACAGAATGCAGTGGCTGCCTGCCTTGCTTGGGGACTGTTACTGGTTAGAGTTCTCCCACAGGGCATaGCTAATAGTTCTATTTTAT +
Preference number: 2 (lower is better)
Translates to: THRMQWLPALLGDCYWLEFSHRA*LIVLFY
Trigger: ATAAAATAGAACTATTAGCCATGCCCTGTGGGAGAA...CTCTAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp ACACACAGAATGCAGTGGCTGCCTGCCTTGCTTGGGGACTGTTACTGGTTAGAGACAGAAAATAGATTATaGGGCTATAAATCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: THRMQWLPALLGDCYWLETENRL*GYKSAA
Trigger: GGCAGCAGATTTATAGCCCCATAATCTATTTTCTGT...CTCTAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGCCAGGAATTTGTCCCTaGTGCAGAAAGGGCAACCAC +
Preference number: 2 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQPGICP*CRKGNH
Trigger: GTGGTTGCCCTTTCTGCACCAGGGACAAATTCCTGG...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGGCTGCCTGCCTTGCTTaGGGACTGTTACTGGTTAGA +
Preference number: 2 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQAACLA*GLLLVR
Trigger: TCTAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGC...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 90 bp AATAGTCATTCAATTAGATGTTTGCCAGGCTGGACACCCTTTTGGTaGCTTGCCATTTCCTATAAATCCTTGTGCCCTGGAGGGTTTGGG +
Preference number: 2 (lower is better)
Translates to: NSHSIRCLPGWTPFW*LAISYKSLCPGGFG
Trigger: CCCAAACCCTCCAGGGCACAAGGATTTATAGGAAATGGCAAGCAACCAAAAGGGTGTCCAGCCTGGCAAACATCTAATTGAATGACTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp TGCTCAGAGTCTAAGCTAATATCCAAAGAGCATGCATGGGCTGTTCAGAATCCCTTTCACATAAGCCATTaGGTCCAATTGCTGTTGCCC +
Preference number: 2 (lower is better)
Translates to: CSESKLISKEHAWAVQNPFHISH*VQLLLP
Trigger: GGGCAACAGCAATTGGACTCAATGGCTTATGTGAAA...GGGATTCTGAACAGCCCATGCATGCTCTTTGGATATTAGCTTAGACTCTGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp AGGAAGGACCCTAGGGATTATCCACTGAGCACACCCCAGATTTACTCCCTAGCTTCTCCAACAGAGGAGTaGACAAAGCAAATAATATAC +
Preference number: 2 (lower is better)
Translates to: RKDPRDYPLSTPQIYSLASPTEE*TKQIIY
Trigger: GTATATTATTTGCTTTGTTCACTCCTCTGTTGGAGA...AGCTAGGGAGTAAATCTGGGGTGTGCTCAGTGGATAATCCCTAGGGTCCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp AGGAAGGACCCTAGGGATTATCCACTGAGCACACCCCAGATTTACTCCCTAGCTGGGCATTTATCCAGATaGCTCCAATTTGATATATCA +
Preference number: 2 (lower is better)
Translates to: RKDPRDYPLSTPQIYSLAGHLSR*LQFDIS
Trigger: TGATATATCAAATTGGAGTCATCTGGATAAATGCCC...AGCTAGGGAGTAAATCTGGGGTGTGCTCAGTGGATAATCCCTAGGGTCCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp TGCTCAGAGTCTAAGCTAATATCCAAAGAGCATGCATGGGCTGTTCAGAATCCCAAGAGCCTGAGAATTTaGCCTGTAGCTGAAACCAAG +
Preference number: 2 (lower is better)
Translates to: CSESKLISKEHAWAVQNPKSLRI*PVAETK
Trigger: CTTGGTTTCAGCTACAGGTCAAATTCTCAGGCTCTT...GGGATTCTGAACAGCCCATGCATGCTCTTTGGATATTAGCTTAGACTCTGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGCTATCAGCAACTGACTaGGATAGATGCAATATACTT +
Preference number: 2 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLLSATD*DRCNIL
Trigger: AAGTATATTGCATCTATCTCAGTCAGTTGCTGATAG...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGCTATCAACAACTGACTaGGACAGATTCAGATACTTA +
Preference number: 2 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLLSTTD*DRFRYL
Trigger: TAAGTATCTGAATCTGTCTCAGTCAGTTGTTGATAG...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp ACACACAGAATGCAGTGGCTGCCTGCCTTGCTTGGGGACTGTTACTGGTTAGAGAATTTACAGATCCAATaGAATCCCCATCAAAATTCC +
Preference number: 2 (lower is better)
Translates to: THRMQWLPALLGDCYWLENLQIQ*NPHQNS
Trigger: GGAATTTTGATGGGGATTGCATTGGATCTGTAAATT...CTCTAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp TGCTCAGAGTCTAAGCTAATATCCAAAGAGCATGCATGGGCTGTTCAGAATCCCTGCCTGAAAGCAATTTaGAGATCCAATGCAATCCCC +
Preference number: 2 (lower is better)
Translates to: CSESKLISKEHAWAVQNPCLKAI*RSNAIP
Trigger: GGGGATTGCATTGGATCTGCAAATTGCTTTCAGGCA...GGGATTCTGAACAGCCCATGCATGCTCTTTGGATATTAGCTTAGACTCTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGATTTGTGATTGTTTATaGTTTTGTTCCAGAGCACCC +
Preference number: 2 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLICDCL*FCSRAP
Trigger: GGGTGCTCTGGAACAAAACCATAAACAATCACAAAT...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGGCAAATTTGCACAACTaGTGGTTATCATGTAGAAGA +
Preference number: 2 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLANLHN*WLSCRR
Trigger: TCTTCTACATGATAACCACCAGTTGTGCAAATTTGC...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp AGATTGAAGAAAAGGACAACCAGAGACTGGCCTACCTTAAAATTGATCCCATGTGACAGGAACCTAGCCTaGCTGTCTGAGAGGTCTATC +
Preference number: 2 (lower is better)
Translates to: RLKKRTTRDWPTLKLIPCDRNLA*LSERSI
Trigger: GATAGACCTCTCAGACAGCCAGGCTAGGTTCCTGTC...ACATGGGATCAATTTTAAGGTAGGCCAGTCTCTGGTTGTCCTTTTCTTCAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp AATCTGCTGCCCATCCAAAGAGATCAGTTTTTGAACTTGTCAGGGCAAAACCCGCTTACAGCCAATATTTaGACTGATGTTGGGAACCCC +
Preference number: 2 (lower is better)
Translates to: NLLPIQRDQFLNLSGQNPLTANI*TDVGNP
Trigger: GGGGTTCCCAACATCAGTCCAAATATTGGCTGTAAG...CGGGTTTTGCCCTGACAAGTTCAAAAACTGATCTCTTTGGATGGGCAGCAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp AATCTGCTGCCCATCCAAAGAGATCAGTTTTTGAACTTGTCAGGGCAAAACCCGCCAACAGTAGGTAGATaGAACCTAAAGAGGCCATCA +
Preference number: 2 (lower is better)
Translates to: NLLPIQRDQFLNLSGQNPPTVGR*NLKRPS
Trigger: TGATGGCCTCTTTAGGTTCCATCTACCTACTGTTGG...CGGGTTTTGCCCTGACAAGTTCAAAAACTGATCTCTTTGGATGGGCAGCAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGACCTGTAGAAACTTGTaGATTTCTTTTAGGACGAAG +
Preference number: 2 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLTCRNL*ISFRTK
Trigger: CTTCGTCCTAAAAGAAATCCACAAGTTTCTACAGGT...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 90 bp GAAGGGGATTACAACACCATAGGAAGAATAACATTATTAATTAACTaGGACCCCACATACCTCCCAGAGGCTAAGCTGCCAGCCAAAGAG +
Preference number: 2 (lower is better)
Translates to: EGDYNTIGRITLLIN*DPTYLPEAKLPAKE
Trigger: CTCTTTGGCTGGCAGCTTAGCCTCTGGGAGGTATGTGGGGTCCAAGTTAATTAATAATGTTATTCTTCCTATGGTGTTGTAATCCCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp AATCTGCTGCCCATCCAAAGAGATCAGTTTTTGAACTTGTCAGGGCAAAACCCGCATGATCAACTTGCCTaGAAGCAATTTGCAGATCCA +
Preference number: 2 (lower is better)
Translates to: NLLPIQRDQFLNLSGQNPHDQLA*KQFADP
Trigger: TGGATCTGCAAATTGCTTTCAGGCAAGTTGATCATG...CGGGTTTTGCCCTGACAAGTTCAAAAACTGATCTCTTTGGATGGGCAGCAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGCTTTCAGTGCTGCTTTaGAAGGGACTGCCATACAAG +
Preference number: 2 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQLSVLL*KGLPYK
Trigger: CTTGTATGGCAGTCCCTTGCAAAGCAGCACTGAAAG...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGTGCAAACCCTCTAGCTaGAAAATGCTATCAGTGGCC +
Preference number: 2 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQCKPSS*KMLSVA
Trigger: GGCCACTGATAGCATTTTCCAGCTAGAGGGTTTGCA...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 90 bp CCAAACTCTGCCTACCGGAGTCTTTGGACCTCTACCTGTAGAAACTaGTGGATTTCTTTTAGGACGAAGCTGTTCTATTGTAAAAGTCCT +
Preference number: 2 (lower is better)
Translates to: PNSAYRSLWTSTCRN*WISFRTKLFYCKSP
Trigger: AGGACTTTTACAATAGAACAGCTTCGTCCTAAAAGAAATCCACAAGTTTCTACAGGTAGAGGTCCAAAGACTCCGGTAGGCAGAGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp AATCTGCTGCCCATCCAAAGAGATCAGTTTTTGAACTTGTCAGGGCAAAACCCGCAATTAGTGGGAAGATaGTGGGAAAGTAGGAATGAT +
Preference number: 2 (lower is better)
Translates to: NLLPIQRDQFLNLSGQNPQLVGR*WESRND
Trigger: ATCATTCCTACTTTCCCATCATCTTCCCACTAATTG...CGGGTTTTGCCCTGACAAGTTCAAAAACTGATCTCTTTGGATGGGCAGCAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp AGATTGAAGAAAAGGACAACCAGAGACTGGCCTACCTTAAAATTGATCCCATGTTCTGAAGGAGTGGGATaGGGGAGGACTCTTGTAAAT +
Preference number: 2 (lower is better)
Translates to: RLKKRTTRDWPTLKLIPCSEGVG*GRTLVN
Trigger: ATTTACAAGAGTCCTCCCTCATCCCACTCCTTCAGA...ACATGGGATCAATTTTAAGGTAGGCCAGTCTCTGGTTGTCCTTTTCTTCAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp AATCTGCTGCCCATCCAAAGAGATCAGTTTTTGAACTTGTCAGGGCAAAACCCGTTACTGCCAAATATTTaGCTGAGGTCTTTGACTCCT +
Preference number: 2 (lower is better)
Translates to: NLLPIQRDQFLNLSGQNPLLPNI*LRSLTP
Trigger: AGGAGTCAAAGACCTCAGTCAAATATTTGGCAGTAA...CGGGTTTTGCCCTGACAAGTTCAAAAACTGATCTCTTTGGATGGGCAGCAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp TGCTCAGAGTCTAAGCTAATATCCAAAGAGCATGCATGGGCTGTTCAGAATCCCCTAGAAAGGGCAATTTaGAAATTTGCACAACTGGTG +
Preference number: 2 (lower is better)
Translates to: CSESKLISKEHAWAVQNPLERAI*KFAQLV
Trigger: CACCAGTTGTGCAAATTTGCAAATTGCCCTTTCTAG...GGGATTCTGAACAGCCCATGCATGCTCTTTGGATATTAGCTTAGACTCTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGCTATCACACAAGCACTaGTGGGTACTGTCACAGATT +
Preference number: 2 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQLSHKH*WVLSQI
Trigger: AATCTGTGACAGTACCCAGCAGTGCTTGTGTGATAG...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGCATGATCAACTTGCCTaGAAGCAATTTGCAGATCCA +
Preference number: 2 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQHDQLA*KQFADP
Trigger: TGGATCTGCAAATTGCTTTCAGGCAAGTTGATCATG...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGAAACTGGCTTTTGACTaGTATGCTAACTCACCTCCA +
Preference number: 2 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQKLAFD*YANSPP
Trigger: TGGAGGTGAGTTAGCATATCAGTCAAAAGCCAGTTT...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp AGATTGAAGAAAAGGACAACCAGAGACTGGCCTACCTTAAAATTGATCCCATGTTGCCTGAAAGCAATTTaGAGATCCAATGCAATCCCC +
Preference number: 2 (lower is better)
Translates to: RLKKRTTRDWPTLKLIPCCLKAI*RSNAIP
Trigger: GGGGATTGCATTGGATCTGCAAATTGCTTTCAGGCA...ACATGGGATCAATTTTAAGGTAGGCCAGTCTCTGGTTGTCCTTTTCTTCAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp AATCTGCTGCCCATCCAAAGAGATCAGTTTTTGAACTTGTCAGGGCAAAACCCGATTTGTGATTGTTTATaGTTTTGTTCCAGAGCACCC +
Preference number: 2 (lower is better)
Translates to: NLLPIQRDQFLNLSGQNPICDCL*FCSRAP
Trigger: GGGTGCTCTGGAACAAAACCATAAACAATCACAAAT...CGGGTTTTGCCCTGACAAGTTCAAAAACTGATCTCTTTGGATGGGCAGCAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp AATCTGCTGCCCATCCAAAGAGATCAGTTTTTGAACTTGTCAGGGCAAAACCCGCTTGCAGAGTCCATGTaGACTTTTATGTATAAAGTC +
Preference number: 2 (lower is better)
Translates to: NLLPIQRDQFLNLSGQNPLAESM*TFMYKV
Trigger: GACTTTATACATAAAAGTCCACATGGACTCTGCAAG...CGGGTTTTGCCCTGACAAGTTCAAAAACTGATCTCTTTGGATGGGCAGCAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp TGCTCAGAGTCTAAGCTAATATCCAAAGAGCATGCATGGGCTGTTCAGAATCCCCTTGCAGAGTCCATGTaGACTTTTATGTATAAAGTC +
Preference number: 2 (lower is better)
Translates to: CSESKLISKEHAWAVQNPLAESM*TFMYKV
Trigger: GACTTTATACATAAAAGTCCACATGGACTCTGCAAG...GGGATTCTGAACAGCCCATGCATGCTCTTTGGATATTAGCTTAGACTCTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp AATCTGCTGCCCATCCAAAGAGATCAGTTTTTGAACTTGTCAGGGCAAAACCCGGTGATAAAAACTGCATaGTACTGGTATAAGACAGAC +
Preference number: 2 (lower is better)
Translates to: NLLPIQRDQFLNLSGQNPVIKTA*YWYKTD
Trigger: GTCTGTCTTATACCAGTACCATGCAGTTTTTATCAC...CGGGTTTTGCCCTGACAAGTTCAAAAACTGATCTCTTTGGATGGGCAGCAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGACCTCTGCCTGGACATaGACTAAAAATGAAGAGACA +
Preference number: 2 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQTSAWT*TKNEET
Trigger: TGTCTCTTCATTTTTAGTCCATGTCCAGGCAGAGGT...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 90 bp CAGAGCACCCACTTGTTAACATACAATAGTCATTCAATTAGATGTTaGCCAGGCTGGACACCCTTTTGGTTGCTTGCCATTTCCTATAAA +
Preference number: 2 (lower is better)
Translates to: QSTHLLTYNSHSIRC*PGWTPFWLLAISYK
Trigger: TTTATAGGAAATGGCAAGCAACCAAAAGGGTGTCCAGCCTGGCAAACATCTAATTGAATGACTATTGTATGTTAACAAGTGGGTGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 90 bp AATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTaGGTCTTTGACAAGGGAGCTAAAACCATCCAGTGGATAAAAGAA +
Preference number: 2 (lower is better)
Translates to: NRIEDPEMNPHTYGH*VFDKGAKTIQWIKE
Trigger: TTCTTTTATCCACTGGATGGTTTTAGCTCCCTTGTCAAAGACCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGTTACTGCCAAATATTTaGCTGAGGTCTTTGACTCCT +
Preference number: 2 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQLLPNI*LRSLTP
Trigger: AGGAGTCAAAGACCTCAGTCAAATATTTGGCAGTAA...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGAAGGTCAAGTCTAAGTaGATCAAGGAACTCCACATA +
Preference number: 2 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQKVKSK*IKELHI
Trigger: TATGTGGAGTTCCTTGATGCACTTAGACTTGACCTT...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp TGCTCAGAGTCTAAGCTAATATCCAAAGAGCATGCATGGGCTGTTCAGAATCCCAATTTACAGATCCAATaGAATCCCCATCAAAATTCC +
Preference number: 2 (lower is better)
Translates to: CSESKLISKEHAWAVQNPNLQIQ*NPHQNS
Trigger: GGAATTTTGATGGGGATTGCATTGGATCTGTAAATT...GGGATTCTGAACAGCCCATGCATGCTCTTTGGATATTAGCTTAGACTCTGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGCTTTGGTGTTTGTTGTaGGATTATGGTAACTTGCCT +
Preference number: 2 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQLWCLL*DYGNLP
Trigger: AGGCAAGTTACCATAATCCCACAACAAACACCAAAG...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp AGATTGAAGAAAAGGACAACCAGAGACTGGCCTACCTTAAAATTGATCCCATGTTCTGGATGCATTCTTTaGCGTGTAAAAACATGTGCA +
Preference number: 2 (lower is better)
Translates to: RLKKRTTRDWPTLKLIPCSGCIL*RVKTCA
Trigger: TGCACATGTTTTTACACGCCAAAGAATGCATCCAGA...ACATGGGATCAATTTTAAGGTAGGCCAGTCTCTGGTTGTCCTTTTCTTCAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGAAAGAGATTTTAGTGTaGTTGCATCAGAGTTGGATC +
Preference number: 2 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQKEILV*LHQSWI
Trigger: GATCCAACTCTGATGCAACCACACTAAAATCTCTTT...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp AGATTGAAGAAAAGGACAACCAGAGACTGGCCTACCTTAAAATTGATCCCATGTCTTTGGTGTTTGTTGTaGGATTATGGTAACTTGCCT +
Preference number: 2 (lower is better)
Translates to: RLKKRTTRDWPTLKLIPCLWCLL*DYGNLP
Trigger: AGGCAAGTTACCATAATCCCACAACAAACACCAAAG...ACATGGGATCAATTTTAAGGTAGGCCAGTCTCTGGTTGTCCTTTTCTTCAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGGTGATAAAAACTGCATaGTACTGGTATAAGACAGAC +
Preference number: 2 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQVIKTA*YWYKTD
Trigger: GTCTGTCTTATACCAGTACCATGCAGTTTTTATCAC...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGCTTGCTTCACCTCAGTaGGAAAGAATGCATTTAATT +
Preference number: 2 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQLASPQ*ERMHLI
Trigger: AATTAAATGCATTCTTTCCCACTGAGGTGAAGCAAG...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGACAGAAAATAGATTATaGGGCTATAAATCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQTENRL*GYKSAA
Trigger: GGCAGCAGATTTATAGCCCCATAATCTATTTTCTGT...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 90 bp GAAGTAATTGACCAGGAAGATACTAGATTCAGACATTGTCAGACTTaGGATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGT +
Preference number: 2 (lower is better)
Translates to: EVIDQEDTRFRHCQT*DFRLIKELKQLLCS
Trigger: ACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATCCAAAGTCTGACAATGTCTGAATCTAGTATCTTCCTGGTCAATTACTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp AGATTGAAGAAAAGGACAACCAGAGACTGGCCTACCTTAAAATTGATCCCATGTTCTCCAACAGAGGAGTaGACAAAGCAAATAATATAC +
Preference number: 2 (lower is better)
Translates to: RLKKRTTRDWPTLKLIPCSPTEE*TKQIIY
Trigger: GTATATTATTTGCTTTGTTCACTCCTCTGTTGGAGA...ACATGGGATCAATTTTAAGGTAGGCCAGTCTCTGGTTGTCCTTTTCTTCAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR TCA 90 bp AGATTGAAGAAAAGGACAACCAGAGACTGGCCTACCTTAAAATTGATCCCATGTAAGATAAAAACCACATaGTCAACTTGCCTGAAAGCA +
Preference number: 2 (lower is better)
Translates to: RLKKRTTRDWPTLKLIPCKIKTT*STCLKA
Trigger: TGCTTTCAGGCAAGTTGATCATGTGGTTTTTATCTT...ACATGGGATCAATTTTAAGGTAGGCCAGTCTCTGGTTGTCCTTTTCTTCAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR GCA 90 bp AGATTGAAGAAAAGGACAACCAGAGACTGGCCTACCTTAAAATTGATCCCATGTAATTTGCAGATCCAATaGAATCCCCATCAAAATTCC +
Preference number: 2 (lower is better)
Translates to: RLKKRTTRDWPTLKLIPCNLQIQ*NPHQNS
Trigger: GGAATTTTGATGGGGATTGCATTGGATCTGCAAATT...ACATGGGATCAATTTTAAGGTAGGCCAGTCTCTGGTTGTCCTTTTCTTCAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp CTGGATAGATTCACCTCCTGTTTACCCAATCTCTTGTTGAGCCCTTCTTTCAAAAAGTTATACTATTTCTaGATGCATTCTTTGGCGTGT +
Preference number: 2 (lower is better)
Translates to: LDRFTSCLPNLLLSPSFKKLYYF*MHSLAC
Trigger: ACACGCCAAAGAATGCATCCAGAAATAGTATAACTT...TTTGAAAGAAGGGCTCAACAAGAGATTGGGTAAACAGGAGGTGAATCTATCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CCA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGAAGTTATACTATTTCTaGATGCATTCTTTGGCGTGT +
Preference number: 2 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQKLYYF*MHSLAC
Trigger: ACACGCCAAAGAATGCATCCAGAAATAGTATAACTT...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 90 bp TTGCAAATTTGCACAACTGGTGGTTATCATGTAGAAGAATTCGAATaGATCCATTATTATCTCCTTGTACTAAGGTCAAGTCTAAGTGCA +
Preference number: 2 (lower is better)
Translates to: LQICTTGGYHVEEFE*IHYYLLVLRSSLSA
Trigger: TGCACTTAGACTTGACCTTAGTACAAGGAGATAATAATGGATCAATTCGAATTCTTCTACATGATAACCACCAGTTGTGCAAATTTGCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR GCA 72 bp CCCTGGTGCAGAAAGGGCAACCACTGGGCTAAGGTGTaGAAATCCAAGCCAGGCACTCTGGGCCATCCAGTG +
Preference number: 3 (lower is better)
Translates to: PWCRKGNHWAKV*KSKPGTLGHPV
Trigger: CACTGGATGGCCCAGAGTGCCTGGCTTGGATTTGCACACCTTAGCCCAGTGGTTGCCCTTTCTGCACCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 72 bp AGTGGGCAAGCAGGCCATGCCCCAGGAATTTGTCCCTaGTGCAGAAAGGGCAACCACTGGGCTAAGGTGTGC +
Preference number: 3 (lower is better)
Translates to: SGQAGHAPGICP*CRKGNHWAKVC
Trigger: GCACACCTTAGCCCAGTGGTTGCCCTTTCTGCACCAGGGACAAATTCCTGGGGCATGGCCTGCTTGCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR GCA 72 bp GGGCAAGCAGGCCATGCCCCAGGAATTTGTCCCTGGTaGAGAAAGGGCAACCACTGGGCTAAGGTGTGCAAA +
Preference number: 3 (lower is better)
Translates to: GQAGHAPGICPW*RKGNHWAKVCK
Trigger: TTTGCACACCTTAGCCCAGTGGTTGCCCTTTCTGCACCAGGGACAAATTCCTGGGGCATGGCCTGCTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR TCA 72 bp AGCCTACATGGGCTGGTCTGTGGACCCTGCTACATATaGGGCAGAGGACTGCCTTGCTTCACCTCAGTGGGA +
Preference number: 3 (lower is better)
Translates to: SLHGLVCGPCYI*GRGLPCFTSVG
Trigger: TCCCACTGAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGACCAGCCCATGTAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR GCA 72 bp CAAGAACAAAGGTGCCGAGAGTGGGCAAGCAGGCCATaGCCCAGGAATTTGTCCCTGGTGCAGAAAGGGCAA +
Preference number: 3 (lower is better)
Translates to: QEQRCREWASRP*PRNLSLVQKGQ
Trigger: TTGCCCTTTCTGCACCAGGGACAAATTCCTGGGGCATGGCCTGCTTGCCCACTCTCGGCACCTTTGTTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 72 bp AAGCTGCCAGCCAAAGAGCCTACATGGGCTGGTCTGTaGACCCTGCTACATATGAGGCAGAGGACTGCCTTG +
Preference number: 3 (lower is better)
Translates to: KLPAKEPTWAGL*TLLHMRQRTAL
Trigger: CAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGACCAGCCCATGTAGGCTCTTTGGCTGGCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR TCA 72 bp GCACTAGCCATTCAGCCTCCCAGGACCCAGTGGAGATaGCCTCAGCCAAAATGCCCAACAGTAGGTAGATGG +
Preference number: 3 (lower is better)
Translates to: ALAIQPPRTQWR*PQPKCPTVGRW
Trigger: CCATCTACCTACTGTTGGGCATTTTGGCTGAGGTCATCTCCACTGGGTCCTGGGAGGCTGAATGGCTAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR GCA 72 bp TTAACTTGGACCCCACATACCTCCCAGAGGCTAAGCTaGCAGCCAAAGAGCCTACATGGGCTGGTCTGTGGA +
Preference number: 3 (lower is better)
Translates to: LTWTPHTSQRLS*QPKSLHGLVCG
Trigger: TCCACAGACCAGCCCATGTAGGCTCTTTGGCTGGCAGCTTAGCCTCTGGGAGGTATGTGGGGTCCAAGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 72 bp CCAGGAATTTGTCCCTGGTGCAGAAAGGGCAACCACTaGGCTAAGGTGTGCAAATCCAAGCCAGGCACTCTG +
Preference number: 3 (lower is better)
Translates to: PGICPWCRKGNH*AKVCKSKPGTL
Trigger: CAGAGTGCCTGGCTTGGATTTGCACACCTTAGCCCAGTGGTTGCCCTTTCTGCACCAGGGACAAATTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR GCA 72 bp CCTGTTGGAGTGTACACACAGAATGCAGTGGCTGCCTaGCTTGCTTGGGGACTGTTACTGGTTAGAGGGGAT +
Preference number: 3 (lower is better)
Translates to: PVGVYTQNAVAA*LAWGLLLVRGD
Trigger: ATCCCCTCTAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGTACACTCCAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGAGGCAGAGGACTGCCTaGCTTCACCTCAGTGGGAAA +
Preference number: 3 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLRQRTA*LHLSGK
Trigger: TTTCCCACTGAGGTGAAGCAAGGCAGTCCTCTGCCT...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGGTAGTGGCCACTATCTaGCCTGCATCCCACGCTGAT +
Preference number: 3 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLVVATI*PASHAD
Trigger: ATCAGCGTGGGATGCAGGCAAGATAGTGGCCACTAC...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR TCA 72 bp GATGTCCAGGGAAGCAGGATGTCTGAAGGAGTGGGATaGGGGAGGACTCTTGTAAATGTGAAGGAGAGGGGT +
Preference number: 3 (lower is better)
Translates to: DVQGSRMSEGVG*GRTLVNVKERG
Trigger: ACCCCTCTCCTTCACATTTACAAGAGTCCTCCCTCATCCCACTCCTTCAGACATCCTGCTTCCCTGGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp GCTGGTCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCCATTCAATTAGATGTTaGCCAGGCTGGACACCCTTT +
Preference number: 3 (lower is better)
Translates to: AGLWTLLHMRQRTALLHLHSIRC*PGWTPF
Trigger: AAAGGGTGTCCAGCCTGGCAAACATCTAATTGAATG...GAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGACCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp GCTGGTCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCTTTTCACATAAGCCATaGAGTCCAATTGCTGTTGCC +
Preference number: 3 (lower is better)
Translates to: AGLWTLLHMRQRTALLHLFSHKP*SPIAVA
Trigger: GGCAACAGCAATTGGACTCAATGGCTTATGTGAAAA...GAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR TCA 72 bp AATTTGATGACCCAGGGAATGGGAATACTAGTGGAGTaGGGTTGGACTGGCTGGGTAGTTAGTGGAGCCCAC +
Preference number: 3 (lower is better)
Translates to: NLMTQGMGILVE*GWTGWVVSGAH
Trigger: GTGGGCTCCACTAACTACCCAGCCAGTCCAACCTCACTCCACTAGTATTCCCATTCCCTGGGTCATCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGATTTCCTATAAATCCTaGTGCCCTGGAGGGTTTGGG +
Preference number: 3 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLISYKS*CPGGFG
Trigger: CCCAAACCCTCCAGGGCACAAGGATTTATAGGAAAT...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp AGGAAGGACCCTAGGGATTATCCACTGAGCACACCCCAGATTTACTCCCTAGCTATTTCCTATAAATCCTaGTGCCCTGGAGGGTTTGGG +
Preference number: 3 (lower is better)
Translates to: RKDPRDYPLSTPQIYSLAISYKS*CPGGFG
Trigger: CCCAAACCCTCCAGGGCACAAGGATTTATAGGAAAT...AGCTAGGGAGTAAATCTGGGGTGTGCTCAGTGGATAATCCCTAGGGTCCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp TCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCAGTGGCTTACTGCCAAATATTaGACTGAGGTCTTTGACTCC +
Preference number: 3 (lower is better)
Translates to: SVDPATYEAEDCLASPQWLTAKY*TEVFDS
Trigger: GGAGTCAAAGACCTCAGTCAAATATTTGGCAGTAAG...CCACTGAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR GCA 72 bp CCCTTTTGGTTGCTTGCCATTTCCTATAAATCCTTGTaGCCTGGAGGGTTTGGGGCTGCTGCATCAAACTGT +
Preference number: 3 (lower is better)
Translates to: PFWLLAISYKSL*PGGFGAAASNC
Trigger: ACAGTTTGATGCAGCAGCCCCAAACCCTCCAGGGCACAAGGATTTATAGGAAATGGCAAGCAACCAAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR GCA 72 bp TCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTaGCATACAAGCAATGTTCTCGCGGAAATGAGGGAA +
Preference number: 3 (lower is better)
Translates to: SGFGFQCCFARD*HTSNVLAEMRE
Trigger: TTCCCTCATTTCCGCGAGAACATTGCTTGTATGGCAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp ACACACAGAATGCAGTGGCTGCCTGCCTTGCTTGGGGACTGTTACTGGTTAGAGTTTTCACATAAGCCATaGAGTCCAATTGCTGTTGCC +
Preference number: 3 (lower is better)
Translates to: THRMQWLPALLGDCYWLEFSHKP*SPIAVA
Trigger: GGCAACAGCAATTGGACTCAATGGCTTATGTGAAAA...CTCTAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGTGTGCCCTGGAGGGTTaGGGGCTGCTGCATCAAACT +
Preference number: 3 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQCALEG*GLLHQT
Trigger: AGTTTGATGCAGCAGCCCCAAACCCTCCAGGGCACA...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp GCTGGTCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCCAATTACTTTGGTGTTaGTTGTGGGATTATGGTAAC +
Preference number: 3 (lower is better)
Translates to: AGLWTLLHMRQRTALLHLQLLWC*LWDYGN
Trigger: GTTACCATAATCCCACAACAAACACCAAAGTAATTG...GAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGAAACAAAGCTCCAAATaGCTAACCTGGAGAGATGGG +
Preference number: 3 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLKQSSK*LTWRDG
Trigger: CCCATCTCTCCAGGTTAGCAATTTGGAGCTTTGTTT...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR TCA 72 bp ATCCCATGTACAGGCACCAAGCGCCAAGACTATTACTaGTGCCACGTTGTGTCTAAAGACAGGAGCTTAGCA +
Preference number: 3 (lower is better)
Translates to: IPCTGTKRQDYY*CHVVSKDRSLA
Trigger: TGCTAAGCTCCTGTCTTTAGACACAACGTGGCATCAGTAATAGTCTTGGCGCTTGGTGCCTGTACATGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 72 bp TTTGTGCAGAAATCGGGCCGTCATATAATCAGGGTTTaGCTTTCAGTGCTGCTTTGCAAGGGACTGCCATAC +
Preference number: 3 (lower is better)
Translates to: FVQKSGRHIIRV*LSVLLCKGLPY
Trigger: GTATGGCAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGATTTCTGCACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 72 bp TTGATTTTCCTGTTGGAGTGTACACACAGAATGCAGTaGCTGCCTGCCTTGCTTGGGGACTGTTACTGGTTA +
Preference number: 3 (lower is better)
Translates to: LIFLLECTHRMQ*LPALLGDCYWL
Trigger: TAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGTACACTCCAACAGGAAAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp ACACACAGAATGCAGTGGCTGCCTGCCTTGCTTGGGGACTGTTACTGGTTAGAGTCACTCTTGAGAATTTaGGGGGAAGGTTTGACATTT +
Preference number: 3 (lower is better)
Translates to: THRMQWLPALLGDCYWLESLLRI*GEGLTF
Trigger: AAATGTCAAACCTTCCCCCAAAATTCTCAAGAGTGA...CTCTAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp AGATTGAAGAAAAGGACAACCAGAGACTGGCCTACCTTAAAATTGATCCCATGTTGTGCCCTGGAGGGTTaGGGGCTGCTGCATCAAACT +
Preference number: 3 (lower is better)
Translates to: RLKKRTTRDWPTLKLIPCCALEG*GLLHQT
Trigger: AGTTTGATGCAGCAGCCCCAAACCCTCCAGGGCACA...ACATGGGATCAATTTTAAGGTAGGCCAGTCTCTGGTTGTCCTTTTCTTCAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp AGGAAGGACCCTAGGGATTATCCACTGAGCACACCCCAGATTTACTCCCTAGCTTGGACACCCTTTTGGTaGCTTGCCATTTCCTATAAA +
Preference number: 3 (lower is better)
Translates to: RKDPRDYPLSTPQIYSLAWTPFW*LAISYK
Trigger: TTTATAGGAAATGGCAAGCAACCAAAAGGGTGTCCA...AGCTAGGGAGTAAATCTGGGGTGTGCTCAGTGGATAATCCCTAGGGTCCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp TCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCAGTGGTTACTTTGGTGTTTGTaGTGGGATTATGGTAACTTG +
Preference number: 3 (lower is better)
Translates to: SVDPATYEAEDCLASPQWLLWCL*WDYGNL
Trigger: CAAGTTACCATAATCCCACAACAAACACCAAAGTAA...CCACTGAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp ACACACAGAATGCAGTGGCTGCCTGCCTTGCTTGGGGACTGTTACTGGTTAGAGCAGAAAATGGTAAGTTaGCTTCTCATGACGTACATC +
Preference number: 3 (lower is better)
Translates to: THRMQWLPALLGDCYWLEQKMVS*LLMTYI
Trigger: GATGTACGTCATGAGAAGCAAACTTACCATTTTCTG...CTCTAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp ACACACAGAATGCAGTGGCTGCCTGCCTTGCTTGGGGACTGTTACTGGTTAGAGAGTGACTGGCACAAATaGGTATCTACCTCATTTGTA +
Preference number: 3 (lower is better)
Translates to: THRMQWLPALLGDCYWLESDWHK*VSTSFV
Trigger: TACAAATGAGGTAGATACCAATTTGTGCCAGTCACT...CTCTAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp TGCTATCAGTGGCCCCATAATCTAAGTGGAGTAGGTCCCCCTTCCCAAGAAGTTTTCTGGATGCATTCTTaGGCGTGTAAAAACATGTGC +
Preference number: 3 (lower is better)
Translates to: CYQWPHNLSGVGPPSQEVFWMHS*ACKNMC
Trigger: GCACATGTTTTTACACGCCAAAGAATGCATCCAGAA...AACTTCTTGGGAAGGGGGACCTACTCCACTTAGATTATGGGGCCACTGATAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp ACACACAGAATGCAGTGGCTGCCTGCCTTGCTTGGGGACTGTTACTGGTTAGAGTCATTTTTAGCAGGTTaGTACATAGAAAGGCTACAG +
Preference number: 3 (lower is better)
Translates to: THRMQWLPALLGDCYWLESFLAG*YIERLQ
Trigger: CTGTAGCCTTTCTATGTACAAACCTGCTAAAAATGA...CTCTAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR TCA 72 bp CTTCTGAAATGCACCAAGCTTGACTGCAAAGAACTGTaGGTCAGGCTTGTGGGAGAGGACACAATACTTCTG +
Preference number: 3 (lower is better)
Translates to: LLKCTKLDCKEL*VRLVGEDTILL
Trigger: CAGAAGTATTGTGTCCTCTCCCACAAGCCTGACTCACAGTTCTTTGCAGTCAAGCTTGGTGCATTTCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR TCA 72 bp TCTCCAAGGAGTAACTCTTCTGAAATGCACCAAGCTTaGCTGCAAAGAACTGTGAGTCAGGCTTGTGGGAGA +
Preference number: 3 (lower is better)
Translates to: SPRSNSSEMHQA*LQRTVSQACGR
Trigger: TCTCCCACAAGCCTGACTCACAGTTCTTTGCAGTCAAGCTTGGTGCATTTCAGAAGAGTTACTCCTTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR GCA 72 bp CAATTAGATGTTTGCCAGGCTGGACACCCTTTTGGTTaGTTGCCATTTCCTATAAATCCTTGTGCCCTGGAG +
Preference number: 3 (lower is better)
Translates to: QLDVCQAGHPFG*LPFPINPCALE
Trigger: CTCCAGGGCACAAGGATTTATAGGAAATGGCAAGCAACCAAAAGGGTGTCCAGCCTGGCAAACATCTAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR GCA 72 bp GTTCTCCCACAGGGCATGGCTAATAGTTCTATTTTATaGCAAAAGTTTGTGGCACTAGCCATTCAGCCTCCC +
Preference number: 3 (lower is better)
Translates to: VLPQGMANSSIL*QKFVALAIQPP
Trigger: GGGAGGCTGAATGGCTAGTGCCACAAACTTTTGGCATAAAATAGAACTATTAGCCATGCCCTGTGGGAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp TGCTCAGAGTCTAAGCTAATATCCAAAGAGCATGCATGGGCTGTTCAGAATCCCCATTCAATTAGATGTTaGCCAGGCTGGACACCCTTT +
Preference number: 3 (lower is better)
Translates to: CSESKLISKEHAWAVQNPHSIRC*PGWTPF
Trigger: AAAGGGTGTCCAGCCTGGCAAACATCTAATTGAATG...GGGATTCTGAACAGCCCATGCATGCTCTTTGGATATTAGCTTAGACTCTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp TCGGGCCGTCATATAATCAGGGTTTGGCTTTCAGTGCTGCTTTGCAAGGGACTGATTAAGACCTTACCCTaGCAGAAAATGGTAAGTTTG +
Preference number: 3 (lower is better)
Translates to: SGRHIIRVWLSVLLCKGLIKTLP*QKMVSL
Trigger: CAAACTTACCATTTTCTGCAAGGGTAAGGTCTTAAT...CAGTCCCTTGCAAAGCAGCACTGAAAGCCAAACCCTGATTATATGACGGCCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp AATCTGCTGCCCATCCAAAGAGATCAGTTTTTGAACTTGTCAGGGCAAAACCCGATATTTGGACTGATGTaGGGAACCCCTATGGAAGAG +
Preference number: 3 (lower is better)
Translates to: NLLPIQRDQFLNLSGQNPIFGLM*GTPMEE
Trigger: CTCTTCCATAGGGGTTCCCAACATCAGTCCAAATAT...CGGGTTTTGCCCTGACAAGTTCAAAAACTGATCTCTTTGGATGGGCAGCAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp AATCTGCTGCCCATCCAAAGAGATCAGTTTTTGAACTTGTCAGGGCAAAACCCGAGAGAAGCCACTTCTTaGCTAGTACAGGTGCAACTA +
Preference number: 3 (lower is better)
Translates to: NLLPIQRDQFLNLSGQNPREATS*LVQVQL
Trigger: TAGTTGCACCTGTACTAGCAAAGAAGTGGCTTCTCT...CGGGTTTTGCCCTGACAAGTTCAAAAACTGATCTCTTTGGATGGGCAGCAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGGCTTTCAGTGCTGCTTaGCAAGGGACTGCCATACAA +
Preference number: 3 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQAFSAA*QGTAIQ
Trigger: TTGTATGGCAGTCCCTTGCAAAGCAGCACTGAAAGC...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR GCA 72 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTaGAGTATGGTCCTTCAGCCCCTATCACACAAGCAC +
Preference number: 3 (lower is better)
Translates to: DFRLIKELKQLL*SMVLQPLSHKH
Trigger: GTGCTTGTGTGATAGGGGCTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 72 bp ATGGAGCCAAGATTGAAGAAAAGGACAACCAGAGACTaGCCTACCTTAAAATTGATCCCATGTACAGGCACC +
Preference number: 3 (lower is better)
Translates to: MEPRLKKRTTRD*PTLKLIPCTGT
Trigger: GGTGCCTGTACATGGGATCAATTTTAAGGTAGGCCAGTCTCTGGTTGTCCTTTTCTTCAATCTTGGCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 72 bp TGTAAGGCCACCCTGTCAGGAGGAGATTTCTTACTTTaGGATTCTGAATGGCGAGATGCCAGTAAGAAAACT +
Preference number: 3 (lower is better)
Translates to: CKATLSGGDFLL*DSEWRDASKKT
Trigger: AGTTTTCTTACTGGCATCTCGCCATTCAGAATCCCAAAGTAAGAAATCTCCTCCTGACAGGGTGGCCTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp AATCTGCTGCCCATCCAAAGAGATCAGTTTTTGAACTTGTCAGGGCAAAACCCGTTCTGGATGCATTCTTaGGCGTGTAAAAACATGTGC +
Preference number: 3 (lower is better)
Translates to: NLLPIQRDQFLNLSGQNPFWMHS*ACKNMC
Trigger: GCACATGTTTTTACACGCCAAAGAATGCATCCAGAA...CGGGTTTTGCCCTGACAAGTTCAAAAACTGATCTCTTTGGATGGGCAGCAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp TGCTCAGAGTCTAAGCTAATATCCAAAGAGCATGCATGGGCTGTTCAGAATCCCCACCCTTTTGGTTGCTaGCCATTTCCTATAAATCCT +
Preference number: 3 (lower is better)
Translates to: CSESKLISKEHAWAVQNPHPFGC*PFPINP
Trigger: AGGATTTATAGGAAATGGCAAGCAACCAAAAGGGTG...GGGATTCTGAACAGCCCATGCATGCTCTTTGGATATTAGCTTAGACTCTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 72 bp TATCCAAAGAGCATGCATGGGCTGTTCAGAATCCCCTaGGACATATGTAACACAGGACTGACTTTTCTAATC +
Preference number: 3 (lower is better)
Translates to: YPKSMHGLFRIP*DICNTGLTFLI
Trigger: GATTAGAAAAGTCAGTCCTGTGTTACATATGTCCCAGGGGATTCTGAACAGCCCATGCATGCTCTTTGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 72 bp GCCATAGGCCCTGTTGTAGTCACAGAAAATAGATTATaGGGCTATAAATCTGCTGCCCATCCAAAGAGATCA +
Preference number: 3 (lower is better)
Translates to: AIGPVVVTENRL*GYKSAAHPKRS
Trigger: TGATCTCTTTGGATGGGCAGCAGATTTATAGCCCCATAATCTATTTTCTGTGACTACAACAGGGCCTATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp AATCTGCTGCCCATCCAAAGAGATCAGTTTTTGAACTTGTCAGGGCAAAACCCGATTCTCTGCCTGCATTaGATATGCCTCTCTTATTCT +
Preference number: 3 (lower is better)
Translates to: NLLPIQRDQFLNLSGQNPILCLH*ICLSYS
Trigger: AGAATAAGAGAGGCATATCAAATGCAGGCAGAGAAT...CGGGTTTTGCCCTGACAAGTTCAAAAACTGATCTCTTTGGATGGGCAGCAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp TGCTCAGAGTCTAAGCTAATATCCAAAGAGCATGCATGGGCTGTTCAGAATCCCTGCTTTTACCTTACCTaGTGGTTTTTCCTCTCAATC +
Preference number: 3 (lower is better)
Translates to: CSESKLISKEHAWAVQNPCFYLT*WFFLSI
Trigger: GATTGAGAGGAAAAACCACAAGGTAAGGTAAAAGCA...GGGATTCTGAACAGCCCATGCATGCTCTTTGGATATTAGCTTAGACTCTGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp TGCTCAGAGTCTAAGCTAATATCCAAAGAGCATGCATGGGCTGTTCAGAATCCCATCAGGCAGTTAAAATaGCTTGTAATTCTTCCTCCG +
Preference number: 3 (lower is better)
Translates to: CSESKLISKEHAWAVQNPIRQLK*LVILPP
Trigger: CGGAGGAAGAATTACAAGCAATTTTAACTGCCTGAT...GGGATTCTGAACAGCCCATGCATGCTCTTTGGATATTAGCTTAGACTCTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp TGCTCAGAGTCTAAGCTAATATCCAAAGAGCATGCATGGGCTGTTCAGAATCCCCAGAAAATGGTAAGTTaGCTTCTCATGACGTACATC +
Preference number: 3 (lower is better)
Translates to: CSESKLISKEHAWAVQNPQKMVS*LLMTYI
Trigger: GATGTACGTCATGAGAAGCAAACTTACCATTTTCTG...GGGATTCTGAACAGCCCATGCATGCTCTTTGGATATTAGCTTAGACTCTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp AATCTGCTGCCCATCCAAAGAGATCAGTTTTTGAACTTGTCAGGGCAAAACCCGAGTGACTGGCACAAATaGGTATCTACCTCATTTGTA +
Preference number: 3 (lower is better)
Translates to: NLLPIQRDQFLNLSGQNPSDWHK*VSTSFV
Trigger: TACAAATGAGGTAGATACCAATTTGTGCCAGTCACT...CGGGTTTTGCCCTGACAAGTTCAAAAACTGATCTCTTTGGATGGGCAGCAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGATTACTGATGCCACGTaGTGTCTAAAGACAGGAGCT +
Preference number: 3 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQITDAT*CLKTGA
Trigger: AGCTCCTGTCTTTAGACACAACGTGGCATCAGTAAT...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR TCA 72 bp CCGAATCCAGGAACACATCATAACAATCATCCATCATaGTTAAGTAGGCTTCATTACAGGGATGCAGGATGG +
Preference number: 3 (lower is better)
Translates to: PNPGTHHNNHPS*LSRLHYRDAGW
Trigger: CCATCCTGCATCCCTGTAATGAAGCCTACTTAATCATGATGGATGATTGTTATGATGTGTTCCTGGATTCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 72 bp AGAAATAGGAGTCCAAACTCTGCCTACCGGAGTCTTTaGACCTCTACCTGTAGAAACTTGTGGATTTCTTTT +
Preference number: 3 (lower is better)
Translates to: RNRSPNSAYRSL*TSTCRNLWISF
Trigger: AAAAGAAATCCACAAGTTTCTACAGGTAGAGGTCCAAAGACTCCGGTAGGCAGAGTTTGGACTCCTATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGATTTTGGGGGAAGGTTaGACATTTCCAGTGAATGAG +
Preference number: 3 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQILGEG*TFPVNE
Trigger: CTCATTCACTGGAAATGTCAAACCTTCCCCCAAAAT...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp AGATTGAAGAAAAGGACAACCAGAGACTGGCCTACCTTAAAATTGATCCCATGTATTACTGATGCCACGTaGTGTCTAAAGACAGGAGCT +
Preference number: 3 (lower is better)
Translates to: RLKKRTTRDWPTLKLIPCITDAT*CLKTGA
Trigger: AGCTCCTGTCTTTAGACACAACGTGGCATCAGTAAT...ACATGGGATCAATTTTAAGGTAGGCCAGTCTCTGGTTGTCCTTTTCTTCAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR TCA 72 bp AGTGTTCCTTCTATAAATTTTAAGGAACCTATGAAGTaGTATCAATGGGCAGTTCTCCCACAGGGCATGGCT +
Preference number: 3 (lower is better)
Translates to: SVPSINFKEPMK*YQWAVLPQGMA
Trigger: AGCCATGCCCTGTGGGAGAACTGCCCATTGATATCACTTCATAGGTTCCTTAAAATTTATAGAAGGAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 72 bp CAGCTGTATGTTATGTCAAATTCTCCTGTAACTCTATaGGGAAGAGATCTCTTGTCACAAGTGGGCGTTATA +
Preference number: 3 (lower is better)
Translates to: QLYVMSNSPVTL*GRDLLSQVGVI
Trigger: TATAACGCCCACTTGTGACAAGAGATCTCTTCCCCATAGAGTTACAGGAGAATTTGACATAACATACAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGTCACTCTTGAGAATTTaGGGGGAAGGTTTGACATTT +
Preference number: 3 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQSLLRI*GEGLTF
Trigger: AAATGTCAAACCTTCCCCCAAAATTCTCAAGAGTGA...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGATCAGGCAGTTAAAATaGCTTGTAATTCTTCCTCCG +
Preference number: 3 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQIRQLK*LVILPP
Trigger: CGGAGGAAGAATTACAAGCAATTTTAACTGCCTGAT...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp AGATTGAAGAAAAGGACAACCAGAGACTGGCCTACCTTAAAATTGATCCCATGTCTTACTGCCAAATATTaGACTGAGGTCTTTGACTCC +
Preference number: 3 (lower is better)
Translates to: RLKKRTTRDWPTLKLIPCLTAKY*TEVFDS
Trigger: GGAGTCAAAGACCTCAGTCAAATATTTGGCAGTAAG...ACATGGGATCAATTTTAAGGTAGGCCAGTCTCTGGTTGTCCTTTTCTTCAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGTCTACCTGTAGAAACTaGTGGATTTCTTTTAGGACG +
Preference number: 3 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQSTCRN*WISFRT
Trigger: CGTCCTAAAAGAAATCCACAAGTTTCTACAGGTAGA...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR-3UTR CAA 90 bp GATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTTGTGCAGTATGGTCCTTCAGTTACTTTGGTGTTTGTaGTGGGATTATGGTAACTTG +
Preference number: 3 (lower is better)
Translates to: DFRLIKELKQLLCSMVLQLLWCL*WDYGNL
Trigger: CAAGTTACCATAATCCCACAACAAACACCAAAGTAA...CTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR TCA 72 bp TTAGAAATAAAAGAGCCTGAGAATTTGACCTGTAGCTaGAACCAAGCTACATATAAGTACCAGGAAGGACCC +
Preference number: 3 (lower is better)
Translates to: LEIKEPENLTCS*NQATYKYQEGP
Trigger: GGGTCCTTCCTGGTACTTATATGTAGCTTGGTTTCAGCTACAGGTCAAATTCTCAGGCTCTTTTATTTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 72 bp TACCGGAGTCTTTGGACCTCTACCTGTAGAAACTTGTaGATTTCTTTTAGGACGAAGCTGTTCTATTGTAAA +
Preference number: 3 (lower is better)
Translates to: YRSLWTSTCRNL*ISFRTKLFYCK
Trigger: TTTACAATAGAACAGCTTCGTCCTAAAAGAAATCCACAAGTTTCTACAGGTAGAGGTCCAAAGACTCCGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 72 bp CTGTCAGGAGGAGATTTCTTACTTTGGGATTCTGAATaGCGAGATGCCAGTAAGAAAACTGCCAATTTAAAT +
Preference number: 3 (lower is better)
Translates to: LSGGDFLLWDSE*RDASKKTANLN
Trigger: ATTTAAATTGGCAGTTTTCTTACTGGCATCTCGCCATTCAGAATCCCAAAGTAAGAAATCTCCTCCTGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 72 bp ACATACAATAGTCATTCAATTAGATGTTTGCCAGGCTaGACACCCTTTTGGTTGCTTGCCATTTCCTATAAA +
Preference number: 3 (lower is better)
Translates to: TYNSHSIRCLPG*TPFWLLAISYK
Trigger: TTTATAGGAAATGGCAAGCAACCAAAAGGGTGTCCAGCCTGGCAAACATCTAATTGAATGACTATTGTATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CCA 72 bp GACACAGTCAATAAGACAAAAAGGTCACCAACAGATTaGGAAAGGATCTTTACCTATCCTAAATCAGATAGG +
Preference number: 3 (lower is better)
Translates to: DTVNKTKRSPTD*ERIFTYPKSDR
Trigger: CCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGACCTTTTTGTCTTATTGACTGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR TCA 72 bp ACTGAGATAGATGCAATATACTTACTGCCAAATATTTaGCTGAGGTCTTTGACTCCTATGAAAGAGTTAGGA +
Preference number: 3 (lower is better)
Translates to: TEIDAIYLLPNI*LRSLTPMKELG
Trigger: TCCTAACTCTTTCATAGGAGTCAAAGACCTCAGTCAAATATTTGGCAGTAAGTATATTGCATCTATCTCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR GCA 72 bp ATGATCAACTTGCCTGAAAGCAATTTGCAGATCCAATaGAATCCCCATCAAAATTCCAAATCAATTCTTCAA +
Preference number: 3 (lower is better)
Translates to: MINLPESNLQIQ*NPHQNSKSILQ
Trigger: TTGAAGAATTGATTTGGAATTTTGATGGGGATTGCATTGGATCTGCAAATTGCTTTCAGGCAAGTTGATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
CDS-3UTR TCA 90 bp AGGAAGGACCCTAGGGATTATCCACTGAGCACACCCCAGATTTACTCCCTAGCTGGATGGTGGTGCTGCTaGAGCCCATGTCAGCCAATG +
Preference number: 4 (lower is better)
Translates to: RKDPRDYPLSTPQIYSLAGWWCC*SPCQPM
Trigger: CATTGGCTGACATGGGCTTCAGCAGCACCACCATCC...AGCTAGGGAGTAAATCTGGGGTGTGCTCAGTGGATAATCCCTAGGGTCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp AGTGGAGCCCACTCTCAGAAGCAAAGGGGAGGGTTATaGGGTAACAAACTCTTAGAGGGGTCTGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: SGAHSQKQRGGL*GNKLLEGSGKG
Trigger: CCCCTTCCCAGACCCCTCTAAGAGTTTGTTACCCAATAACCCTCCCCTTTGCTTCTGAGAGTGGGCTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
CDS-3UTR TCA 90 bp TCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCAGTGGAGAGTCCAAGGAGAATaGATTCCAAGGTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: SVDPATYEAEDCLASPQWRVQGE*IPRFLL
Trigger: CAACAGGAACCTTGGAATTCATTCTCCTTGGACTCT...CCACTGAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
CDS-3UTR TCA 90 bp ACACACAGAATGCAGTGGCTGCCTGCCTTGCTTGGGGACTGTTACTGGTTAGAGAGAGTCCAAGGAGAATaGATTCCAAGGTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: THRMQWLPALLGDCYWLERVQGE*IPRFLL
Trigger: CAACAGGAACCTTGGAATTCATTCTCCTTGGACTCT...CTCTAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
CDS-3UTR TCA 90 bp TCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCAGTGGATAGTGCAAATAAGATaGACTGCAGTTCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SVDPATYEAEDCLASPQWIVQIR*TAVQGP
Trigger: AGGACCCTGAACTGCAGTTCATCTTATTTGCACTAT...CCACTGAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp ACACCCTTTTGGTTGCTTGCCATTTCCTATAAATCCTaGTGCCCTGGAGGGTTTGGGGCTGCTGCATCAAAC +
Preference number: 4 (lower is better)
Translates to: TPFWLLAISYKS*CPGGFGAAASN
Trigger: GTTTGATGCAGCAGCCCCAAACCCTCCAGGGCACAAGGATTTATAGGAAATGGCAAGCAACCAAAAGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp TTTGAACTTGTCAGGGCAAAACCCGGAGGTGAAGGATaGGACCTCTTTTCCACCACCCAGGCAGTATTAACC +
Preference number: 4 (lower is better)
Translates to: FELVRAKPGGEG*DLFSTTQAVLT
Trigger: GGTTAATACTGCCTGGGTGGTGGAAAAGAGGTCCAATCCTTCACCTCCGGGTTTTGCCCTGACAAGTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
CDS-3UTR TCA 90 bp TGCTATCAGTGGCCCCATAATCTAAGTGGAGTAGGTCCCCCTTCCCAAGAAGTTGGAGTAAAATATTCCTaGGGCAGGGAGGAAACCAGT +
Preference number: 4 (lower is better)
Translates to: CYQWPHNLSGVGPPSQEVGVKYS*GREETS
Trigger: ACTGGTTTCCTCCCTGCCTCAGGAATATTTTACTCC...AACTTCTTGGGAAGGGGGACCTACTCCACTTAGATTATGGGGCCACTGATAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
CDS-3UTR GCA 90 bp AGGAAGGACCCTAGGGATTATCCACTGAGCACACCCCAGATTTACTCCCTAGCTGCAAATAAGATGAACTaGAGTTCAGGGTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: RKDPRDYPLSTPQIYSLAANKMN*SSGSSE
Trigger: CTCAGAGGACCCTGAACTGCAGTTCATCTTATTTGC...AGCTAGGGAGTAAATCTGGGGTGTGCTCAGTGGATAATCCCTAGGGTCCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp TTAGATGTTTGCCAGGCTGGACACCCTTTTGGTTGCTaGCCATTTCCTATAAATCCTTGTGCCCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: LDVCQAGHPFGC*PFPINPCALEG
Trigger: ACCCTCCAGGGCACAAGGATTTATAGGAAATGGCAAGCAACCAAAAGGGTGTCCAGCCTGGCAAACATCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp GAAGACCCAGAAATGAACCCACACACCTATGGTCACTaGGTCTTTGACAAGGGAGCTAAAACCATCCAGTGG +
Preference number: 4 (lower is better)
Translates to: EDPEMNPHTYGH*VFDKGAKTIQW
Trigger: CCACTGGATGGTTTTAGCTCCCTTGTCAAAGACCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
CDS-3UTR CCA 90 bp ACACACAGAATGCAGTGGCTGCCTGCCTTGCTTGGGGACTGTTACTGGTTAGAGATTCAGCATAAGTTATaGATCTGTTGTGGGCATGCA +
Preference number: 4 (lower is better)
Translates to: THRMQWLPALLGDCYWLEIQHKL*ICCGHA
Trigger: TGCATGCCCACAACAGATCCATAACTTATGCTGAAT...CTCTAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
CDS-3UTR TCA 90 bp TGCTATCAGTGGCCCCATAATCTAAGTGGAGTAGGTCCCCCTTCCCAAGAAGTTATAGTGCAAATAAGATaGACTGCAGTTCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: CYQWPHNLSGVGPPSQEVIVQIR*TAVQGP
Trigger: AGGACCCTGAACTGCAGTTCATCTTATTTGCACTAT...AACTTCTTGGGAAGGGGGACCTACTCCACTTAGATTATGGGGCCACTGATAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
CDS-3UTR TCA 90 bp TGCTCAGAGTCTAAGCTAATATCCAAAGAGCATGCATGGGCTGTTCAGAATCCCGGAGTAAAATATTCCTaGGGCAGGGAGGAAACCAGT +
Preference number: 4 (lower is better)
Translates to: CSESKLISKEHAWAVQNPGVKYS*GREETS
Trigger: ACTGGTTTCCTCCCTGCCTCAGGAATATTTTACTCC...GGGATTCTGAACAGCCCATGCATGCTCTTTGGATATTAGCTTAGACTCTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
CDS-3UTR CCA 90 bp TGCTATCAGTGGCCCCATAATCTAAGTGGAGTAGGTCCCCCTTCCCAAGAAGTTGTTATGGATCTGTTGTaGGCATGCAAGTTTATCAGC +
Preference number: 4 (lower is better)
Translates to: CYQWPHNLSGVGPPSQEVVMDLL*ACKFIS
Trigger: GCTGATAAACTTGCATGCCCACAACAGATCCATAAC...AACTTCTTGGGAAGGGGGACCTACTCCACTTAGATTATGGGGCCACTGATAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
CDS-3UTR GCA 90 bp AATCTGCTGCCCATCCAAAGAGATCAGTTTTTGAACTTGTCAGGGCAAAACCCGGCAAATAAGATGAACTaGAGTTCAGGGTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: NLLPIQRDQFLNLSGQNPANKMN*SSGSSE
Trigger: CTCAGAGGACCCTGAACTGCAGTTCATCTTATTTGC...CGGGTTTTGCCCTGACAAGTTCAAAAACTGATCTCTTTGGATGGGCAGCAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp TCAATTAGATGTTTGCCAGGCTGGACACCCTTTTGGTaGCTTGCCATTTCCTATAAATCCTTGTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SIRCLPGWTPFW*LAISYKSLCPG
Trigger: TCCAGGGCACAAGGATTTATAGGAAATGGCAAGCAACCAAAAGGGTGTCCAGCCTGGCAAACATCTAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp AGATTCAGATACTTACAGCCAATATTTGGACTGATGTaGGGAACCCCTATGGAAGAGTTAGGGGACGGACTG +
Preference number: 4 (lower is better)
Translates to: RFRYLQPIFGLM*GTPMEELGDGL
Trigger: CAGTCCGTCCCCTAACTCTTCCATAGGGGTTCCCAACATCAGTCCAAATATTGGCTGTAAGTATCTGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp TTTATAAGGGCCAGACTAATCAGATTGATTTTCCTGTaGGAGTGTACACACAGAATGCAGTGGCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: FIRARLIRLIFL*ECTHRMQWLPA
Trigger: GGCAGGCAGCCACTGCATTCTGTGTGTACACTCCAACAGGAAAATCAATCTGATTAGTCTGGCCCTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp GCCTACCGGAGTCTTTGGACCTCTACCTGTAGAAACTaGTGGATTTCTTTTAGGACGAAGCTGTTCTATTGT +
Preference number: 4 (lower is better)
Translates to: AYRSLWTSTCRN*WISFRTKLFYC
Trigger: ACAATAGAACAGCTTCGTCCTAAAAGAAATCCACAAGTTTCTACAGGTAGAGGTCCAAAGACTCCGGTAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp TGGGAGAAGGCCTTTATAAGGGCCAGACTAATCAGATaGATTTTCCTGTTGGAGTGTACACACAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: WEKAFIRARLIR*IFLLECTHRMQ
Trigger: CTGCATTCTGTGTGTACACTCCAACAGGAAAATCAATCTGATTAGTCTGGCCCTTATAAAGGCCTTCTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp TTGGATTTCAGGTTGATAAAGGAGTTAAAGCAGCTGTaGTGCAGTATGGTCCTTCAGCCCCTATCACACAAG +
Preference number: 4 (lower is better)
Translates to: LDFRLIKELKQL*CSMVLQPLSHK
Trigger: CTTGTGTGATAGGGGCTGAAGGACCATACTGCACAACAGCTGCTTTAACTCCTTTATCAACCTGAAATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp GCTATAGGAAATACAGGCTCAAAAATGGAGCCAAGATaGAAGAAAAGGACAACCAGAGACTGGCCTACCTTA +
Preference number: 4 (lower is better)
Translates to: AIGNTGSKMEPR*KKRTTRDWPTL
Trigger: TAAGGTAGGCCAGTCTCTGGTTGTCCTTTTCTTCAATCTTGGCTCCATTTTTGAGCCTGTATTTCCTATAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp CTAAAGAGGCCATCAGTAGGTAGACATGGCTCCCATTaGAAGCATGGGCAACCCAAACATATTCAAAATTCT +
Preference number: 4 (lower is better)
Translates to: LKRPSVGRHGSH*KHGQPKHIQNS
Trigger: AGAATTTTGAATATGTTTGGGTTGCCCATGCTTCAAATGGGAGCCATGTCTACCTACTGATGGCCTCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp AAGAGATTTGGAGTATTTTCCGTAGTGGCCACTATCTaGCCTGCATCCCACGCTGATAAAATTCAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: KRFGVFSVVATI*PASHADKIQRL
Trigger: AAGCCTTTGAATTTTATCAGCGTGGGATGCAGGCAAGATAGTGGCCACTACGGAAAATACTCCAAATCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
CDS-3UTR CCA 90 bp CTGGATAGATTCACCTCCTGTTTACCCAATCTCTTGTTGAGCCCTTCTTTCAAAGTTATGGATCTGTTGTaGGCATGCAAGTTTATCAGC +
Preference number: 4 (lower is better)
Translates to: LDRFTSCLPNLLLSPSFKVMDLL*ACKFIS
Trigger: GCTGATAAACTTGCATGCCCACAACAGATCCATAAC...TTTGAAAGAAGGGCTCAACAAGAGATTGGGTAAACAGGAGGTGAATCTATCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp AGTTTGCTTCTCATGACGTACATCAGGCAGTTAAAATaGCTTGTAATTCTTCCTCCGGGGTATCTGAATTCC +
Preference number: 4 (lower is better)
Translates to: SLLLMTYIRQLK*LVILPPGYLNS
Trigger: GGAATTCAGATACCCCGGAGGAAGAATTACAAGCAATTTTAACTGCCTGATGTACGTCATGAGAAGCAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp TACAACACCATAGGAAGAATAACATTATTAATTAACTaGGACCCCACATACCTCCCAGAGGCTAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: YNTIGRITLLIN*DPTYLPEAKLP
Trigger: TGGCAGCTTAGCCTCTGGGAGGTATGTGGGGTCCAAGTTAATTAATAATGTTATTCTTCCTATGGTGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
CDS-3UTR CCA 90 bp CTGGATAGATTCACCTCCTGTTTACCCAATCTCTTGTTGAGCCCTTCTTTCAAAATTCAGCATAAGTTATaGATCTGTTGTGGGCATGCA +
Preference number: 4 (lower is better)
Translates to: LDRFTSCLPNLLLSPSFKIQHKL*ICCGHA
Trigger: TGCATGCCCACAACAGATCCATAACTTATGCTGAAT...TTTGAAAGAAGGGCTCAACAAGAGATTGGGTAAACAGGAGGTGAATCTATCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp CACTTGTTAACATACAATAGTCATTCAATTAGATGTTaGCCAGGCTGGACACCCTTTTGGTTGCTTGCCATT +
Preference number: 4 (lower is better)
Translates to: HLLTYNSHSIRC*PGWTPFWLLAI
Trigger: AATGGCAAGCAACCAAAAGGGTGTCCAGCCTGGCAAACATCTAATTGAATGACTATTGTATGTTAACAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp GACCAGGAAGATACTAGATTCAGACATTGTCAGACTTaGGATTTCAGGTTGATAAAGGAGTTAAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: DQEDTRFRHCQT*DFRLIKELKQL
Trigger: CAGCTGCTTTAACTCCTTTATCAACCTGAAATCCAAAGTCTGACAATGTCTGAATCTAGTATCTTCCTGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp TTTTCAACAAATGGTGCTTATCACCACATGATCAACTaGCCTGAAAGCAATTTACAGATCCAATGCAATCCC +
Preference number: 4 (lower is better)
Translates to: FSTNGAYHHMIN*PESNLQIQCNP
Trigger: GGGATTGCATTGGATCTGTAAATTGCTTTCAGGCAAGTTGATCATGTGGTGATAAGCACCATTTGTTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp GCAATTAAGACCTTACCCTTGCAGAAAATGGTAAGTTaGCTTCTCATGACGTACATCAGGCAGTTAAAATTG +
Preference number: 4 (lower is better)
Translates to: AIKTLPLQKMVS*LLMTYIRQLKL
Trigger: CAATTTTAACTGCCTGATGTACGTCATGAGAAGCAAACTTACCATTTTCTGCAAGGGTAAGGTCTTAATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp ATTCCGACATCAGGACATAGTGAAACTACATGTAAGTaGGATAAGTGCATCAAGATAGACCTGGATTTATCA +
Preference number: 4 (lower is better)
Translates to: IPTSGHSETTCK*DKCIKIDLDLS
Trigger: TGATAAATCCAGGTCTATCTTGATGCACTTATCCAACTTACATGTAGTTTCACTATGTCCTGATGTCGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
3UTR CAA 72 bp TGCACAACTGGTGGTTATCATGTAGAAGAATTCGAATaGATCCATTATTATCTCCTTGTACTAAGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: CTTGGYHVEEFE*IHYYLLVLRSS
Trigger: ACTTGACCTTAGTACAAGGAGATAATAATGGATCAATTCGAATTCTTCTACATGATAACCACCAGTTGTGCA
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
CDS-3UTR CAA 90 bp GCTGGTCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCAAGTTTATCAGCATCTaGGGGATGGTGGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: AGLWTLLHMRQRTALLHLKFISI*GMVVLL
Trigger: CAGCAGCACCACCATCCCCAAGATGCTGATAAACTT...GAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
CDS-3UTR CAA 90 bp AGGAAGGACCCTAGGGATTATCCACTGAGCACACCCCAGATTTACTCCCTAGCTAAGTTTATCAGCATCTaGGGGATGGTGGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: RKDPRDYPLSTPQIYSLAKFISI*GMVVLL
Trigger: CAGCAGCACCACCATCCCCAAGATGCTGATAAACTT...AGCTAGGGAGTAAATCTGGGGTGTGCTCAGTGGATAATCCCTAGGGTCCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
CDS-3UTR CAA 90 bp TCTGTGGACCCTGCTACATATGAGGCAGAGGACTGCCTTGCTTCACCTCAGTGGGCCACCATACTTTCCTaGGAAGAACTAGAAACTGTT +
Preference number: 5 (lower is better)
Translates to: SVDPATYEAEDCLASPQWATILS*EELETV
Trigger: AACAGTTTCTAGTTCTTCCAAGGAAAGTATGGTGGC...CCACTGAGGTGAAGCAAGGCAGTCCTCTGCCTCATATGTAGCAGGGTCCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
CDS-3UTR CAA 90 bp ACACACAGAATGCAGTGGCTGCCTGCCTTGCTTGGGGACTGTTACTGGTTAGAGGCCACCATACTTTCCTaGGAAGAACTAGAAACTGTT +
Preference number: 5 (lower is better)
Translates to: THRMQWLPALLGDCYWLEATILS*EELETV
Trigger: AACAGTTTCTAGTTCTTCCAAGGAAAGTATGGTGGC...CTCTAACCAGTAACAGTCCCCAAGCAAGGCAGGCAGCCACTGCATTCTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212540.3
ENSMUST00000217280.2
CDS CAA 72 bp ATGGATCTGTTGTGGGCATGCAAGTTTATCAGCATCTaGGGGATGGTGGTGCTGCTGAAGCCCATGTCAGCC +
Preference number: 6 (lower is better)
Translates to: MDLLWACKFISI*GMVVLLKPMSA
Trigger: GGCTGACATGGGCTTCAGCAGCACCACCATCCCCAAGATGCTGATAAACTTGCATGCCCACAACAGATCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086480.2
ENSMUST00000212540.3
ENSMUST00000217280.2