Pregenerated sensors for OLFR855 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043087Ensembl transcript IDs: ENSMUST00000215587.2
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TACAATCATAATGTGCACATATATCATGGATTGTTAGTCCTTTCCTTCCACCATGTTGGTCACAGGGATTaGAATTATTTCCTTAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: YNHNVHIYHGLLVLSFHHVGHRD*NYFLRL Trigger: AAGCCTAAGGAAATAATTTCAATCCCTGTGACCAAC...ATGGTGGAAGGAAAGGACTAACAATCCATGATATATGTGCACATTATGATTGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215587.2 |
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| 3UTR-3UTR CCA 90 bp | TACAATCATAATGTGCACATATATCATGGATTGTTAGTCCTTTCCTTCCACCATAAGTGCTTTTGCATGTaGAATAATCTGCCAGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: YNHNVHIYHGLLVLSFHHKCFCM*NNLPVQ Trigger: CTGAACTGGCAGATTATTCCACATGCAAAAGCACTT...ATGGTGGAAGGAAAGGACTAACAATCCATGATATATGTGCACATTATGATTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215587.2 |
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| 3UTR-3UTR GCA 90 bp | AATCATAATGTGCACATATATCATGGATTGTTAGTCCTTTCCTTCCACCATGTTAGGCTTAGAGGTAAGTaGTTTTGCATGTGGAATAAT | + |
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Preference number: 2 (lower is better) Translates to: NHNVHIYHGLLVLSFHHVRLRGK*FCMWNN Trigger: ATTATTCCACATGCAAAAGCACTTACCTCTAAGCCT...AACATGGTGGAAGGAAAGGACTAACAATCCATGATATATGTGCACATTATGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215587.2 |
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| 3UTR TCA 72 bp | TTAGTCCTTTCCTTCCACCATGTTGGTCACAGGGATTaGAATTATTTCCTTAGGCTTAGAGGTAAGTGCTTT | + |
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Preference number: 3 (lower is better) Translates to: LVLSFHHVGHRD*NYFLRLRGKCF Trigger: AAAGCACTTACCTCTAAGCCTAAGGAAATAATTTCAATCCCTGTGACCAACATGGTGGAAGGAAAGGACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215587.2 |
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| 3UTR CCA 72 bp | TATTTCCTTAGGCTTAGAGGTAAGTGCTTTTGCATGTaGAATAATCTGCCAGTTCAGATAACCTTTTACACT | + |
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Preference number: 3 (lower is better) Translates to: YFLRLRGKCFCM*NNLPVQITFYT Trigger: AGTGTAAAAGGTTATCTGAACTGGCAGATTATTCCACATGCAAAAGCACTTACCTCTAAGCCTAAGGAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215587.2 |
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| CDS-3UTR TCA 90 bp | CACATATATCATGGATTGTTAGTCCTTTCCTTCCACCATGTTGGTCACAGGGATCACAGAGTACATCACTaGAGCCACTGCAGATTTTCC | + |
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Preference number: 4 (lower is better) Translates to: HIYHGLLVLSFHHVGHRDHRVHH*SHCRFS Trigger: GGAAAATCTGCAGTGGCTTCAGTGATGTACTCTGTG...ATCCCTGTGACCAACATGGTGGAAGGAAAGGACTAACAATCCATGATATATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215587.2 |
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| CDS-3UTR CCA 90 bp | ATATCATGGATTGTTAGTCCTTTCCTTCCACCATGTTGGTCACAGGGATTGAAAATGGGGGTTTGGAGGTaGGACTCAGAGCTTATACAC | + |
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Preference number: 4 (lower is better) Translates to: ISWIVSPFLPPCWSQGLKMGVWR*DSELIH Trigger: GTGTATAAGCTCTGAGTCCCACCTCCAAACCCCCAT...TTTCAATCCCTGTGACCAACATGGTGGAAGGAAAGGACTAACAATCCATGATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215587.2 |
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| CDS-3UTR TCA 90 bp | ATATCATGGATTGTTAGTCCTTTCCTTCCACCATGTTGGTCACAGGGATTGAAAAAAGGGTTCATCATTTaGGGAAGCACAGAGTACATC | + |
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Preference number: 4 (lower is better) Translates to: ISWIVSPFLPPCWSQGLKKGFII*GSTEYI Trigger: GATGTACTCTGTGCTTCCTCAAATGATGAACCCTTT...TTTCAATCCCTGTGACCAACATGGTGGAAGGAAAGGACTAACAATCCATGATAT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000215587.2 |
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| CDS-3UTR TCA 90 bp | AATCATAATGTGCACATATATCATGGATTGTTAGTCCTTTCCTTCCACCATGTTGGCAGTCTGTGTAAGTaGTGCTCTGGTCATTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: NHNVHIYHGLLVLSFHHVGSLCK*CSGHLL Trigger: AAGCAAATGACCAGAGCATCACTTACACAGACTGCC...AACATGGTGGAAGGAAAGGACTAACAATCCATGATATATGTGCACATTATGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215587.2 |
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| CDS-3UTR TCA 90 bp | TCACAGATGTTGACGCATAGAGAGTCCAAGATTCAGTACAATTTATTGAAGCATCTGAAGATGAGACACTaGAGTTCTGCATCATCTGTA | + |
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Preference number: 4 (lower is better) Translates to: SQMLTHRESKIQYNLLKHLKMRH*SSASSV Trigger: TACAGATGATGCAGAACTTCAGTGTCTCATCTTCAG...ATGCTTCAATAAATTGTACTGAATCTTGGACTCTCTATGCGTCAACATCTGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215587.2 |
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| CDS-3UTR GCA 90 bp | TCACAGATGTTGACGCATAGAGAGTCCAAGATTCAGTACAATTTATTGAAGCATGAGACACTGAAGTTCTaGATCATCTGTAAATCCAAG | + |
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Preference number: 4 (lower is better) Translates to: SQMLTHRESKIQYNLLKHETLKF*IICKSK Trigger: CTTGGATTTACAGATGATGCAGAACTTCAGTGTCTC...ATGCTTCAATAAATTGTACTGAATCTTGGACTCTCTATGCGTCAACATCTGTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215587.2 |
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| CDS-3UTR CCA 90 bp | AATCATAATGTGCACATATATCATGGATTGTTAGTCCTTTCCTTCCACCATGTTCTCTGGTCATTTGCTTaGATGTTAACCAGCATCTTG | + |
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Preference number: 4 (lower is better) Translates to: NHNVHIYHGLLVLSFHHVLWSFA*MLTSIL Trigger: CAAGATGCTGGTTAACATCCAAGCAAATGACCAGAG...AACATGGTGGAAGGAAAGGACTAACAATCCATGATATATGTGCACATTATGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215587.2 |
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| CDS-3UTR TCA 90 bp | AAGTGCTTTTGCATGTGGAATAATCTGCCAGTTCAGATAACCTTTTACACTTTAATACTTTCCCTCCAATaGTGCTATCTTCAAGATTGT | + |
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Preference number: 4 (lower is better) Translates to: KCFCMWNNLPVQITFYTLILSLQ*CYLQDC Trigger: ACAATCTTGAAGATAGCATCATTGGAGGGAAAGTAT...TAAAGTGTAAAAGGTTATCTGAACTGGCAGATTATTCCACATGCAAAAGCACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215587.2 |
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| CDS-3UTR GCA 90 bp | AAGTGCTTTTGCATGTGGAATAATCTGCCAGTTCAGATAACCTTTTACACTTTAACCAAATACACAAGTTaGAACAAAGAGCACGATGTT | + |
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Preference number: 4 (lower is better) Translates to: KCFCMWNNLPVQITFYTLTKYTS*NKEHDV Trigger: AACATCGTGCTCTTTGTTGCAACTTGTGTATTTGGT...TAAAGTGTAAAAGGTTATCTGAACTGGCAGATTATTCCACATGCAAAAGCACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215587.2 |
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| CDS-3UTR CAA 90 bp | CACATATATCATGGATTGTTAGTCCTTTCCTTCCACCATGTTGGTCACAGGGATATGTTAACCAGCATCTaGATGACTGTGGCTGTGCTT | + |
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Preference number: 5 (lower is better) Translates to: HIYHGLLVLSFHHVGHRDMLTSI*MTVAVL Trigger: AAGCACAGCCACAGTCATCAAGATGCTGGTTAACAT...ATCCCTGTGACCAACATGGTGGAAGGAAAGGACTAACAATCCATGATATATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215587.2 |
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| CDS-3UTR CAA 90 bp | ATATCATGGATTGTTAGTCCTTTCCTTCCACCATGTTGGTCACAGGGATTGAAAGCTCTGGTCATTTGCTaGGATGTTAACCAGCATCTT | + |
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Preference number: 5 (lower is better) Translates to: ISWIVSPFLPPCWSQGLKALVIC*DVNQHL Trigger: AAGATGCTGGTTAACATCCAAGCAAATGACCAGAGC...TTTCAATCCCTGTGACCAACATGGTGGAAGGAAAGGACTAACAATCCATGATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215587.2 |
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| CDS-3UTR CAA 90 bp | ATATCATGGATTGTTAGTCCTTTCCTTCCACCATGTTGGTCACAGGGATTGAAACACCAAATACACAAGTaGCAACAAAGAGCACGATGT | + |
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Preference number: 5 (lower is better) Translates to: ISWIVSPFLPPCWSQGLKHQIHK*QQRARC Trigger: ACATCGTGCTCTTTGTTGCAACTTGTGTATTTGGTG...TTTCAATCCCTGTGACCAACATGGTGGAAGGAAAGGACTAACAATCCATGATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215587.2 |
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| CDS-3UTR CAA 90 bp | CAGATGTTGACGCATAGAGAGTCCAAGATTCAGTACAATTTATTGAAGCATAATAAAAGGGTTCATCATTaGAGGAAGCACAGAGTACAT | + |
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Preference number: 5 (lower is better) Translates to: QMLTHRESKIQYNLLKHNKRVHH*RKHRVH Trigger: ATGTACTCTGTGCTTCCTCAAATGATGAACCCTTTT...ATTATGCTTCAATAAATTGTACTGAATCTTGGACTCTCTATGCGTCAACATCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215587.2 |
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