Pregenerated sensors for OLFR853 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051160Ensembl transcript IDs: ENSMUST00000213834.2
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCCATCATTTGGAAGAGAGGCCCTTTGTTTGGCAAAGAGTATATaGCCCATGTACAGGGGAATGCCAGGGCCAGGAAGCAGGAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: QPSFGREALCLAKSI*PMYRGMPGPGSRSG Trigger: CCCACTCCTGCTTCCTGGCCCTGGCATTCCCCTGTACATGGGGCATATACTCTTTGCCAAACAAAGGGCCTCTCTTCCAAATGATGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CCA 90 bp | GAAGATGGCCTAGTCAGCCATCATTTGGAAGAGAGGCCCTTTGTTTaGCAAAGAGTATATGCCCCATGTACAGGGGAATGCCAGGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: EDGLVSHHLEERPFV*QRVYAPCTGECQGQ Trigger: CTGGCCCTGGCATTCCCCTGTACATGGGGCATATACTCTTTGCCAAACAAAGGGCCTCTCTTCCAAATGATGGCTGACTAGGCCATCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CCA 90 bp | CAGGCCATATATGTCATAGAAGATGATGGCCTTGTTAGACATCAGTaGGAGGAGAGGTCCTTGGGCTTGAGGGTGTTTGATGGCCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: QAIYVIEDDGLVRHQ*EERSLGLRVFDGPV Trigger: CACTGGGCCATCAAACACCCTCAAGCCCAAGGACCTCTCCTCCCACTGATGTCTAACAAGGCCATCATCTTCTATGACATATATGGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CCA 90 bp | GAAGCAACAGTGTCATTCGGCCAGACTCCCCAGAGCTCCCGGGAATaGATTACCAAAGAAAGAGTACACAAGGAAAGACCCATGACTCAG | + |
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Preference number: 1 (lower is better) Translates to: EATVSFGQTPQSSRE*ITKERVHKERPMTQ Trigger: CTGAGTCATGGGTCTTTCCTTGTGTACTCTTTCTTTGGTAATCCATTCCCGGGAGCTCTGGGGAGTCTGGCCGAATGACACTGTTGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CCA 90 bp | CCTCTCAGGAGACAAATACAGAGGCAATTGCTTGCAGCCAACCATTaGACTAAATGTTGGGTCCCTGATGGAGGAGCTGGAGAAGGGACT | + |
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Preference number: 1 (lower is better) Translates to: PLRRQIQRQLLAANH*TKCWVPDGGAGEGT Trigger: AGTCCCTTCTCCAGCTCCTCCATCAGGGACCCAACATTTAGTCCAATGGTTGGCTGCAAGCAATTGCCTCTGTATTTGTCTCCTGAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR GCA 90 bp | TACGTGTTCTGGCAGAGCCTCTCAGGAGACAAATACAGAGGCAATTaGTTGCAGCCAACCATTGGACTAAATGTTGGGTCCCTGATGGAG | + |
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Preference number: 1 (lower is better) Translates to: YVFWQSLSGDKYRGN*LQPTIGLNVGSLME Trigger: CTCCATCAGGGACCCAACATTTAGTCCAATGGTTGGCTGCAAGCAATTGCCTCTGTATTTGTCTCCTGAGAGGCTCTGCCAGAACACGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR GCA 90 bp | GAAGAAACAGCCAATATTCTGCTTTTATCATGGACTCACAATATCTaGAACTTCCATTCTTTCTCTGAGCTCAACAGAAACTTCTACAGT | + |
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Preference number: 1 (lower is better) Translates to: EETANILLLSWTHNI*NFHSFSELNRNFYS Trigger: ACTGTAGAAGTTTCTGTTGAGCTCAGAGAAAGAATGGAAGTTGCAGATATTGTGAGTCCATGATAAAAGCAGAATATTGGCTGTTTCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CCA 90 bp | AATATTGCTGGAGAAGAAGAAACAGCCAATATTCTGCTTTTATCATaGACTCACAATATCTGCAACTTCCATTCTTTCTCTGAGCTCAAC | + |
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Preference number: 1 (lower is better) Translates to: NIAGEEETANILLLS*THNICNFHSFSELN Trigger: GTTGAGCTCAGAGAAAGAATGGAAGTTGCAGATATTGTGAGTCCATGATAAAAGCAGAATATTGGCTGTTTCTTCTTCTCCAGCAATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CCA 90 bp | GGTATTTTGTTCCTGATTCTAAAGAGGAATGCAGTATCCACACTTTaGTCTTCCTTCTTCTTGAGTTTCATGTGTTTTGCAAATTGTATC | + |
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Preference number: 1 (lower is better) Translates to: GILFLILKRNAVSTL*SSFFLSFMCFANCI Trigger: GATACAATTTGCAAAACACATGAAACTCAAGAAGAAGGAAGACCAAAGTGTGGATACTGCATTCCTCTTTAGAATCAGGAACAAAATACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR-3UTR CCA 90 bp | CCATGGAGGAAGCAACAGTGTCATTCGGCCAGACTCCCCAGAGCTCCCGGGAATCTTGTTAGACATCAGTaGGAGGAGAGGTCCTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: PWRKQQCHSARLPRAPGNLVRHQ*EERSLG Trigger: GCCCAAGGACCTCTCCTCCCACTGATGTCTAACAAG...ATTCCCGGGAGCTCTGGGGAGTCTGGCCGAATGACACTGTTGCTTCCTCCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTGGCAGAGCCTCTCAGGAGACAAATACAGAGGCAATTGCTTGCAGCCAACCGGAGGGAAGATGGGATaGGAGTTTCCGAAGGGGACA | + |
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Preference number: 2 (lower is better) Translates to: FWQSLSGDKYRGNCLQPTGGKMG*EFPKGT Trigger: TGTCCCCTTCGGAAACTCCCATCCCATCTTCCCTCC...GGTTGGCTGCAAGCAATTGCCTCTGTATTTGTCTCCTGAGAGGCTCTGCCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGATGGTCCTTCCTTCCATCTCAGCTCCAAACTTTACCTCTGTAACTCCTCAGGGGGAGGGAAGATaGGATGGGAGTTTCCGAAGG | + |
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Preference number: 2 (lower is better) Translates to: LWMVLPSISAPNFTSVTPQGEGR*DGSFRR Trigger: CCTTCGGAAACTCCCATCCCATCTTCCCTCCCCCTG...AGGAGTTACAGAGGTAAAGTTTGGAGCTGAGATGGAAGGAAGGACCATCCAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CAA 90 bp | GTGTTCTGGCAGAGCCTCTCAGGAGACAAATACAGAGGCAATTGCTaGCAGCCAACCATTGGACTAAATGTTGGGTCCCTGATGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: VFWQSLSGDKYRGNC*QPTIGLNVGSLMEE Trigger: CTCCTCCATCAGGGACCCAACATTTAGTCCAATGGTTGGCTGCAAGCAATTGCCTCTGTATTTGTCTCCTGAGAGGCTCTGCCAGAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CAA 90 bp | AGAAGATGGCCTAGTCAGCCATCATTTGGAAGAGAGGCCCTTTGTTaGGCAAAGAGTATATGCCCCATGTACAGGGGAATGCCAGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: RRWPSQPSFGREALC*AKSICPMYRGMPGP Trigger: TGGCCCTGGCATTCCCCTGTACATGGGGCATATACTCTTTGCCAAACAAAGGGCCTCTCTTCCAAATGATGGCTGACTAGGCCATCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGAGGGACATCTGGGTACTTTCCAGCTTCTGGCTATTATAAATAAGGCTTCTGCCAGGAAGCAGGAGTaGGTGGGTTTGGGAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: VEGHLGTFQLLAIINKASARKQE*VGLGAG Trigger: CCCTGCTCCCAAACCCACCCACTCCTGCTTCCTGGC...AGAAGCCTTATTTATAATAGCCAGAAGCTGGAAAGTACCCAGATGTCCCTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGTCTCTGGATGGTCCTTCCTTCCATCTCAGCTCCAAACTTTACCTCTGTCTTGCAGCCAACCATTaGACTAAATGTTGGGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: GQSLDGPSFHLSSKLYLCLAANH*TKCWVP Trigger: AGGGACCCAACATTTAGTCCAATGGTTGGCTGCAAG...ACAGAGGTAAAGTTTGGAGCTGAGATGGAAGGAAGGACCATCCAGAGACTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CAA 90 bp | ATACGTGTTCTGGCAGAGCCTCTCAGGAGACAAATACAGAGGCAATaGCTTGCAGCCAACCATTGGACTAAATGTTGGGTCCCTGATGGA | + |
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Preference number: 2 (lower is better) Translates to: IRVLAEPLRRQIQRQ*LAANHWTKCWVPDG Trigger: TCCATCAGGGACCCAACATTTAGTCCAATGGTTGGCTGCAAGCAATTGCCTCTGTATTTGTCTCCTGAGAGGCTCTGCCAGAACACGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CAA 90 bp | TTTCTGAGGAACTGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTaGCAATCCCACCAGCTATGCCAGTGCCTGGCAAATACAGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: FLRNCQTDFQSGCTS*QSHQLCQCLANTEV Trigger: TACTTCTGTATTTGCCAGGCACTGGCATAGCTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCAGTTCCTCAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCGTTTGGTGGCTGATTATGACATGGATCCCCAGGTAGGGCAGTCTCTGGATGAGTTATTTTGTGATTaGGTTACCTCACTCAGGATG | + |
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Preference number: 2 (lower is better) Translates to: LRLVADYDMDPQVGQSLDELFCD*VTSLRM Trigger: CATCCTGAGTGAGGTAACCCAATCACAAAATAACTC...ATCCAGAGACTGCCCTACCTGGGGATCCATGTCATAATCAGCCACCAAACGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGAAGATGGCCTAGTCAGCCATCATTTGGAAGAGAGGCCCTTTGTTTGGCAATCATCCAGAGATACATaGAATAGTTCAGAAGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: AEDGLVSHHLEERPFVWQSSRDT*NSSEGH Trigger: GTGGCCTTCTGAACTATTTCATGTATCTCTGGATGA...TTGCCAAACAAAGGGCCTCTCTTCCAAATGATGGCTGACTAGGCCATCTTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGAAGAAGAAACAGCCAATATTCTGCTTTTATCATGGACTCACAATATCTGAGAGGTCCTTGGGCTTaGGGGTGTTTGATGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: WRRRNSQYSAFIMDSQYLRGPWA*GCLMAQ Trigger: CTGGGCCATCAAACACCCTCAAGCCCAAGGACCTCT...CAGATATTGTGAGTCCATGATAAAAGCAGAATATTGGCTGTTTCTTCTTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGAGGGACATCTGGGTACTTTCCAGCTTCTGGCTATTATAAATAAGGCTTCTAGAAAATACGTGTTCTaGCAGAGCCTCTCAGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: VEGHLGTFQLLAIINKASRKYVF*QSLSGD Trigger: GTCTCCTGAGAGGCTCTGCCAGAACACGTATTTTCT...AGAAGCCTTATTTATAATAGCCAGAAGCTGGAAAGTACCCAGATGTCCCTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGATGGTCCTTCCTTCCATCTCAGCTCCAAACTTTACCTCTGTAACTCCTTGGACTCACAATATCTaGAACTTCCATTCTTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LWMVLPSISAPNFTSVTPWTHNI*NFHSFS Trigger: AGAGAAAGAATGGAAGTTGCAGATATTGTGAGTCCA...AGGAGTTACAGAGGTAAAGTTTGGAGCTGAGATGGAAGGAAGGACCATCCAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR-3UTR GCA 90 bp | CTTATCAGTGAGTGCATATCATGTGAGTTATTTTGTGATTGGGTTACCTCACTCCAATCCCACCAGCTATaGCAGTGCCTGGCAAATACA | + |
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Preference number: 2 (lower is better) Translates to: LISECISCELFCDWVTSLQSHQL*QCLANT Trigger: TGTATTTGCCAGGCACTGGCATAGCTGGTGGGATTG...GAGTGAGGTAACCCAATCACAAAATAACTCACATGATATGCACTCACTGATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR-3UTR CCA 90 bp | GTAATTAAGAAAATACGTGTTCTGGCAGAGCCTCTCAGGAGACAAATACAGAGGCAGAGCTCCCGGGAATaGATTACCAAAGAAAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: VIKKIRVLAEPLRRQIQRQSSRE*ITKERV Trigger: TACTCTTTCTTTGGTAATCCATTCCCGGGAGCTCTG...CCTCTGTATTTGTCTCCTGAGAGGCTCTGCCAGAACACGTATTTTCTTAATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCATCTCAGCTCCAAACTTTACCTCTGTAACTCCTTCCATGGGTATTTTGTTGAGAGGCCCTTTGTTTaGCAAAGAGTATATGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: FHLSSKLYLCNSFHGYFVERPFV*QRVYAP Trigger: TGGGGCATATACTCTTTGCCAAACAAAGGGCCTCTC...AACAAAATACCCATGGAAGGAGTTACAGAGGTAAAGTTTGGAGCTGAGATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CAA 90 bp | ATCTCAGCTCCAAACTTTACCTCTGTAACTCCTTCCATGGGTATTTaGTTCCTGATTCTAAAGAGGAATGCAGTATCCACACTTTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: ISAPNFTSVTPSMGI*FLILKRNAVSTLWS Trigger: AGACCAAAGTGTGGATACTGCATTCCTCTTTAGAATCAGGAACAAAATACCCATGGAAGGAGTTACAGAGGTAAAGTTTGGAGCTGAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGAGGGACATCTGGGTACTTTCCAGCTTCTGGCTATTATAAATAAGGCTTCTCCAATTTATTCAGGATaGTGCCATAAACATCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: VEGHLGTFQLLAIINKASPIYSG*CHKHQC Trigger: GCACTGATGTTTATGGCATCATCCTGAATAAATTGG...AGAAGCCTTATTTATAATAGCCAGAAGCTGGAAAGTACCCAGATGTCCCTCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGAGAAGAAGAAACAGCCAATATTCTGCTTTTATCATGGACTCACAATATCTGGGATTCAAAAGCCTTaGAAACCAGAGAAGTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: LEKKKQPIFCFYHGLTISGIQKP*KPEKSN Trigger: GTTGGACTTCTCTGGTTTGCAAGGCTTTTGAATCCC...AGATATTGTGAGTCCATGATAAAAGCAGAATATTGGCTGTTTCTTCTTCTCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCATGGGTATTTTGTTCCTGATTCTAAAGAGGAATGCAGTATCCACACTTTGAACGAACCAAATGGTTaGAGGTCTTCCATTTTACTC | + |
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Preference number: 2 (lower is better) Translates to: FHGYFVPDSKEECSIHTLNEPNG*RSSILL Trigger: GAGTAAAATGGAAGACCTCCAACCATTTGGTTCGTT...CAAAGTGTGGATACTGCATTCCTCTTTAGAATCAGGAACAAAATACCCATGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CAA 90 bp | GGGTATTTTGTTCCTGATTCTAAAGAGGAATGCAGTATCCACACTTaGGTCTTCCTTCTTCTTGAGTTTCATGTGTTTTGCAAATTGTAT | + |
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Preference number: 2 (lower is better) Translates to: GYFVPDSKEECSIHT*VFLLLEFHVFCKLY Trigger: ATACAATTTGCAAAACACATGAAACTCAAGAAGAAGGAAGACCAAAGTGTGGATACTGCATTCCTCTTTAGAATCAGGAACAAAATACCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CAA 90 bp | TATTATAGAATACTTTCATGGATGGGGAATACATGTGAGGGAATATaGCTGGAGAAGAAGAAACAGCCAATATTCTGCTTTTATCATGGA | + |
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Preference number: 2 (lower is better) Translates to: YYRILSWMGNTCEGI*LEKKKQPIFCFYHG Trigger: TCCATGATAAAAGCAGAATATTGGCTGTTTCTTCTTCTCCAGCAATATTCCCTCACATGTATTCCCCATCCATGAAAGTATTCTATAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CAA 90 bp | ATTCTAAAGAGGAATGCAGTATCCACACTTTGGTCTTCCTTCTTCTaGAGTTTCATGTGTTTTGCAAATTGTATCTTGGGTATTCTAAGT | + |
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Preference number: 2 (lower is better) Translates to: ILKRNAVSTLWSSFF*SFMCFANCILGILS Trigger: ACTTAGAATACCCAAGATACAATTTGCAAAACACATGAAACTCAAGAAGAAGGAAGACCAAAGTGTGGATACTGCATTCCTCTTTAGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CAA 90 bp | GATGTATACAAGAGACAGAATGATGTAACAGATGCCTTGACATTTTaGTATGACATAGCAAGTGGTTCTTTCATTTTGAGTAGTTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: DVYKRQNDVTDALTF*YDIASGSFILSSCV Trigger: GACACAACTACTCAAAATGAAAGAACCACTTGCTATGTCATACAAAAATGTCAAGGCATCTGTTACATCATTCTGTCTCTTGTATACATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR TCA 72 bp | TCAGTGGGAGGAGAGGTCCTTGGGCTTGAGGGTGTTTaGTGGCCCAGTGTAGGGGAATGCCAGGGTGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: SVGGEVLGLEGV*WPSVGECQGGK Trigger: CTTCCCACCCTGGCATTCCCCTACACTGGGCCATCAAACACCCTCAAGCCCAAGGACCTCTCCTCCCACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAGAGTATATGCCCCATGTACAGGGGAATGCCAGGGCCAGGAAGCAGGAGTGGAGAGGTCCTTGGGCTaGAGGGTGTTTGATGGCCCA | + |
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Preference number: 3 (lower is better) Translates to: QRVYAPCTGECQGQEAGVERSLG*RVFDGP Trigger: TGGGCCATCAAACACCCTCAAGCCCAAGGACCTCTC...CACTCCTGCTTCCTGGCCCTGGCATTCCCCTGTACATGGGGCATATACTCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR GCA 72 bp | TTTGGAAGAGAGGCCCTTTGTTTGGCAAAGAGTATATaGCCCATGTACAGGGGAATGCCAGGGCCAGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: FGREALCLAKSI*PMYRGMPGPGS Trigger: GCTTCCTGGCCCTGGCATTCCCCTGTACATGGGGCATATACTCTTTGCCAAACAAAGGGCCTCTCTTCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CCA 72 bp | GTGTCATTCGGCCAGACTCCCCAGAGCTCCCGGGAATaGATTACCAAAGAAAGAGTACACAAGGAAAGACCC | + |
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Preference number: 3 (lower is better) Translates to: VSFGQTPQSSRE*ITKERVHKERP Trigger: GGGTCTTTCCTTGTGTACTCTTTCTTTGGTAATCCATTCCCGGGAGCTCTGGGGAGTCTGGCCGAATGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CCA 72 bp | AGGCAATTGCTTGCAGCCAACCATTGGACTAAATGTTaGGTCCCTGATGGAGGAGCTGGAGAAGGGACTGAA | + |
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Preference number: 3 (lower is better) Translates to: RQLLAANHWTKC*VPDGGAGEGTE Trigger: TTCAGTCCCTTCTCCAGCTCCTCCATCAGGGACCCAACATTTAGTCCAATGGTTGGCTGCAAGCAATTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR GCA 72 bp | TGGCAGAGCCTCTCAGGAGACAAATACAGAGGCAATTaGTTGCAGCCAACCATTGGACTAAATGTTGGGTCC | + |
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Preference number: 3 (lower is better) Translates to: WQSLSGDKYRGN*LQPTIGLNVGS Trigger: GGACCCAACATTTAGTCCAATGGTTGGCTGCAAGCAATTGCCTCTGTATTTGTCTCCTGAGAGGCTCTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR GCA 72 bp | ACTGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTaGAATCCCACCAGCTATGCCAGTGCCTGGCAAATA | + |
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Preference number: 3 (lower is better) Translates to: TARLISRVVVQA*NPTSYASAWQI Trigger: TATTTGCCAGGCACTGGCATAGCTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCAGTCTCTGGATGGTCCTTCCTTCCATCTCAGCTCCAAACTTTACCTCTGTTCTTCTTGCTCCCCATaGTCCTATTTGTGCAGTCAT | + |
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Preference number: 3 (lower is better) Translates to: GQSLDGPSFHLSSKLYLCSSCSP*SYLCSH Trigger: ATGACTGCACAAATAGGACAATGGGGAGCAAGAAGA...ACAGAGGTAAAGTTTGGAGCTGAGATGGAAGGAAGGACCATCCAGAGACTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CCA 72 bp | AGACAAATACAGAGGCAATTGCTTGCAGCCAACCATTaGACTAAATGTTGGGTCCCTGATGGAGGAGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: RQIQRQLLAANH*TKCWVPDGGAG Trigger: TCCAGCTCCTCCATCAGGGACCCAACATTTAGTCCAATGGTTGGCTGCAAGCAATTGCCTCTGTATTTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR GCA 72 bp | TGTCAGCAAAATCTTGCTGGCATATGCAATAGTGTCTaGGTTTGGTGGCTGATTATGACATGGATCCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: CQQNLAGICNSV*VWWLIMTWIPR Trigger: CCTGGGGATCCATGTCATAATCAGCCACCAAACGCAGACACTATTGCATATGCCAGCAAGATTTTGCTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CCA 72 bp | TATGTCATAGAAGATGATGGCCTTGTTAGACATCAGTaGGAGGAGAGGTCCTTGGGCTTGAGGGTGTTTGAT | + |
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Preference number: 3 (lower is better) Translates to: YVIEDDGLVRHQ*EERSLGLRVFD Trigger: ATCAAACACCCTCAAGCCCAAGGACCTCTCCTCCCACTGATGTCTAACAAGGCCATCATCTTCTATGACATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCATCTCAGCTCCAAACTTTACCTCTGTAACTCCTTCCATGGGTATTTTGTTAGAGAGGCCCTTTGTTaGGCAAAGAGTATATGCCCC | + |
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Preference number: 3 (lower is better) Translates to: FHLSSKLYLCNSFHGYFVREALC*AKSICP Trigger: GGGGCATATACTCTTTGCCAAACAAAGGGCCTCTCT...AACAAAATACCCATGGAAGGAGTTACAGAGGTAAAGTTTGGAGCTGAGATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR GCA 72 bp | GTATCAGGGTCATGTCAGCAAAATCTTGCTGGCATATaGAATAGTGTCTGCGTTTGGTGGCTGATTATGACA | + |
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Preference number: 3 (lower is better) Translates to: VSGSCQQNLAGI*NSVCVWWLIMT Trigger: TGTCATAATCAGCCACCAAACGCAGACACTATTGCATATGCCAGCAAGATTTTGCTGACATGACCCTGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR GCA 72 bp | TTCTCCAGTAGTACTATGTCCAATTTTCTGAGGAACTaGCAGACTGATTTCCAGAGTGGTTGTACAAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: FSSSTMSNFLRN*QTDFQSGCTSL Trigger: CAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCAGTTCCTCAGAAAATTGGACATAGTACTACTGGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CCA 72 bp | AAATACAGAAGTAGATGCTCACAGTCATCTATTGGATaGAACACAGGGTCCCCAATGGAAGAGCTAGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: KYRSRCSQSSIG*NTGSPMEELEK Trigger: TTTCTCTAGCTCTTCCATTGGGGACCCTGTGTTCCATCCAATAGATGACTGTGAGCATCTACTTCTGTATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR GCA 72 bp | AGAAGTTTCTTTCCAGGGTCCTCAGATAAGTCTTCTTaGTCCCCATTGTCCTATTTGTGCAGTCATACAATT | + |
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Preference number: 3 (lower is better) Translates to: RSFFPGSSDKSS*SPLSYLCSHTI Trigger: AATTGTATGACTGCACAAATAGGACAATGGGGAGCAAGAAGACTTATCTGAGGACCCTGGAAAGAAACTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CCA 72 bp | ATCAGTGAGTGCATATCATGTGAGTTATTTTGTGATTaGGTTACCTCACTCAGGATGATATCCTCCAGATCC | + |
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Preference number: 3 (lower is better) Translates to: ISECISCELFCD*VTSLRMISSRS Trigger: GGATCTGGAGGATATCATCCTGAGTGAGGTAACCCAATCACAAAATAACTCACATGATATGCACTCACTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGAGAAGAAGAAACAGCCAATATTCTGCTTTTATCATGGACTCACAATATCTAGGGATTCAAAAGCCTaGCAAACCAGAGAAGTCCAA | + |
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Preference number: 3 (lower is better) Translates to: LEKKKQPIFCFYHGLTISRDSKA*QTREVQ Trigger: TTGGACTTCTCTGGTTTGCAAGGCTTTTGAATCCCT...AGATATTGTGAGTCCATGATAAAAGCAGAATATTGGCTGTTTCTTCTTCTCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR GCA 72 bp | TTCCATGGGTATTTTGTTCCTGATTCTAAAGAGGAATaGAGTATCCACACTTTGGTCTTCCTTCTTCTTGAG | + |
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Preference number: 3 (lower is better) Translates to: FHGYFVPDSKEE*SIHTLVFLLLE Trigger: CTCAAGAAGAAGGAAGACCAAAGTGTGGATACTGCATTCCTCTTTAGAATCAGGAACAAAATACCCATGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CCA 72 bp | TGGTATCTAGTCACTACTGTAAACGAACCAAATGGTTaGAGGTCTTCCATTTTACTCATCCAGAGATACATG | + |
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Preference number: 3 (lower is better) Translates to: WYLVTTVNEPNG*RSSILLIQRYM Trigger: CATGTATCTCTGGATGAGTAAAATGGAAGACCTCCAACCATTTGGTTCGTTTACAGTAGTGACTAGATACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CCA 72 bp | TTCCTGATTCTAAAGAGGAATGCAGTATCCACACTTTaGTCTTCCTTCTTCTTGAGTTTCATGTGTTTTGCA | + |
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Preference number: 3 (lower is better) Translates to: FLILKRNAVSTL*SSFFLSFMCFA Trigger: TGCAAAACACATGAAACTCAAGAAGAAGGAAGACCAAAGTGTGGATACTGCATTCCTCTTTAGAATCAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR TCA 72 bp | ATGGACTCACAATATCTGCAACTTCCATTCTTTCTCTaGGCTCAACAGAAACTTCTACAGTTAATTCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: MDSQYLQLPFFL*AQQKLLQLIQK Trigger: CTTCTGAATTAACTGTAGAAGTTTCTGTTGAGCTCAGAGAAAGAATGGAAGTTGCAGATATTGTGAGTCCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CCA 72 bp | GGAGAAGAAGAAACAGCCAATATTCTGCTTTTATCATaGACTCACAATATCTGCAACTTCCATTCTTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: GEEETANILLLS*THNICNFHSFS Trigger: AGAGAAAGAATGGAAGTTGCAGATATTGTGAGTCCATGATAAAAGCAGAATATTGGCTGTTTCTTCTTCTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CCA 72 bp | GTAAGTGGAATTCATATTATAGAATACTTTCATGGATaGGGAATACATGTGAGGGAATATTGCTGGAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: VSGIHIIEYFHG*GIHVREYCWRR Trigger: TCTTCTCCAGCAATATTCCCTCACATGTATTCCCCATCCATGAAAGTATTCTATAATATGAATTCCACTTAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CCA 72 bp | ATCAGTAAGTGGAATTCATATTATAGAATACTTTCATaGATGGGGAATACATGTGAGGGAATATTGCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: ISKWNSYYRILS*MGNTCEGILLE Trigger: CTCCAGCAATATTCCCTCACATGTATTCCCCATCCATGAAAGTATTCTATAATATGAATTCCACTTACTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CCA 72 bp | CAGAGGAACTCAGAACTAGATTCTACTATCAGTAAGTaGAATTCATATTATAGAATACTTTCATGGATGGGG | + |
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Preference number: 3 (lower is better) Translates to: QRNSELDSTISK*NSYYRILSWMG Trigger: CCCCATCCATGAAAGTATTCTATAATATGAATTCCACTTACTGATAGTAGAATCTAGTTCTGAGTTCCTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| CDS-3UTR TCA 90 bp | TTCTGGCAGAGCCTCTCAGGAGACAAATACAGAGGCAATTGCTTGCAGCCAACCATTGGAGTGTGGAGGTaGGCGTCAGAGACAATGGCC | + |
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Preference number: 4 (lower is better) Translates to: FWQSLSGDKYRGNCLQPTIGVWR*ASETMA Trigger: GGCCATTGTCTCTGACGCTCACCTCCACACTCCAAT...GGTTGGCTGCAAGCAATTGCCTCTGTATTTGTCTCCTGAGAGGCTCTGCCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CAA 72 bp | CAGAGCCTCTCAGGAGACAAATACAGAGGCAATTGCTaGCAGCCAACCATTGGACTAAATGTTGGGTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: QSLSGDKYRGNC*QPTIGLNVGSL Trigger: CAGGGACCCAACATTTAGTCCAATGGTTGGCTGCAAGCAATTGCCTCTGTATTTGTCTCCTGAGAGGCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CAA 72 bp | CTGGCAGAGCCTCTCAGGAGACAAATACAGAGGCAATaGCTTGCAGCCAACCATTGGACTAAATGTTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LAEPLRRQIQRQ*LAANHWTKCWV Trigger: GACCCAACATTTAGTCCAATGGTTGGCTGCAAGCAATTGCCTCTGTATTTGTCTCCTGAGAGGCTCTGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| CDS-3UTR TCA 90 bp | GGGCAGTCTCTGGATGGTCCTTCCTTCCATCTCAGCTCCAAACTTTACCTCTGTTGCAGCCTGTGTAACTaGTGGATTTGCTCTGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: GQSLDGPSFHLSSKLYLCCSLCN*WICSVS Trigger: AGAAACAGAGCAAATCCATCAGTTACACAGGCTGCA...ACAGAGGTAAAGTTTGGAGCTGAGATGGAAGGAAGGACCATCCAGAGACTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CAA 72 bp | CCTAGTCAGCCATCATTTGGAAGAGAGGCCCTTTGTTaGGCAAAGAGTATATGCCCCATGTACAGGGGAATG | + |
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Preference number: 4 (lower is better) Translates to: PSQPSFGREALC*AKSICPMYRGM Trigger: CATTCCCCTGTACATGGGGCATATACTCTTTGCCAAACAAAGGGCCTCTCTTCCAAATGATGGCTGACTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| CDS-3UTR GCA 90 bp | CTGCGTTTGGTGGCTGATTATGACATGGATCCCCAGGTAGGGCAGTCTCTGGATGAGAGTGTCAGAACATaGAATCTTGATAACCTGATA | + |
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Preference number: 4 (lower is better) Translates to: LRLVADYDMDPQVGQSLDESVRT*NLDNLI Trigger: TATCAGGTTATCAAGATTGCATGTTCTGACACTCTC...ATCCAGAGACTGCCCTACCTGGGGATCCATGTCATAATCAGCCACCAAACGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| CDS-3UTR TCA 90 bp | CATGGATGGGGAATACATGTGAGGGAATATTGCTGGAGAAGAAGAAACAGCCAAATGAGATCCACATGTTaGAAAAGCCTTATGCCTACC | + |
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Preference number: 4 (lower is better) Translates to: HGWGIHVREYCWRRRNSQMRSTC*KSLMPT Trigger: GGTAGGCATAAGGCTTTTTCAACATGTGGATCTCAT...TTGGCTGTTTCTTCTTCTCCAGCAATATTCCCTCACATGTATTCCCCATCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| CDS-3UTR TCA 90 bp | GTAGAGGGACATCTGGGTACTTTCCAGCTTCTGGCTATTATAAATAAGGCTTCTGATTTGCTCTGTTTCTaGAGGTTTGTCAGCATCTTA | + |
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Preference number: 4 (lower is better) Translates to: VEGHLGTFQLLAIINKASDLLCF*RFVSIL Trigger: TAAGATGCTGACAAACCTTCAGAAACAGAGCAAATC...AGAAGCCTTATTTATAATAGCCAGAAGCTGGAAAGTACCCAGATGTCCCTCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| CDS-3UTR TCA 90 bp | CAGATAAGTCTTCTTGCTCCCCATTGTCCTATTTGTGCAGTCATACAATTTGTAGAACAAGGAAACCACTaGCAGATGAGATCCACATGT | + |
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Preference number: 4 (lower is better) Translates to: QISLLAPHCPICAVIQFVEQGNH*QMRSTC Trigger: ACATGTGGATCTCATCTGTCAGTGGTTTCCTTGTTC...TACAAATTGTATGACTGCACAAATAGGACAATGGGGAGCAAGAAGACTTATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CAA 72 bp | CCAAACTTTACCTCTGTAACTCCTTCCATGGGTATTTaGTTCCTGATTCTAAAGAGGAATGCAGTATCCACA | + |
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Preference number: 4 (lower is better) Translates to: PNFTSVTPSMGI*FLILKRNAVST Trigger: TGTGGATACTGCATTCCTCTTTAGAATCAGGAACAAAATACCCATGGAAGGAGTTACAGAGGTAAAGTTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| CDS-3UTR TCA 90 bp | CAGATAAGTCTTCTTGCTCCCCATTGTCCTATTTGTGCAGTCATACAATTTGTACACAGTATACATCAATaGTGCTACAGAAGTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: QISLLAPHCPICAVIQFVHSIHQ*CYRSSP Trigger: AGGAGAACTTCTGTAGCATCATTGATGTATACTGTG...TACAAATTGTATGACTGCACAAATAGGACAATGGGGAGCAAGAAGACTTATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CAA 72 bp | ATGGTATCTAGTCACTACTGTAAACGAACCAAATGGTaGGAGGTCTTCCATTTTACTCATCCAGAGATACAT | + |
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Preference number: 4 (lower is better) Translates to: MVSSHYCKRTKW*EVFHFTHPEIH Trigger: ATGTATCTCTGGATGAGTAAAATGGAAGACCTCCAACCATTTGGTTCGTTTACAGTAGTGACTAGATACCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| CDS-3UTR TCA 90 bp | CTGGAGAAGAAGAAACAGCCAATATTCTGCTTTTATCATGGACTCACAATATCTAGAAGTTCTCCTGTATaGCTCTGTAAATGCAGAACT | + |
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Preference number: 4 (lower is better) Translates to: LEKKKQPIFCFYHGLTISRSSPV*LCKCRT Trigger: AGTTCTGCATTTACAGAGTCATACAGGAGAACTTCT...AGATATTGTGAGTCCATGATAAAAGCAGAATATTGGCTGTTTCTTCTTCTCCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| CDS-3UTR GCA 90 bp | CTTATCAGTGAGTGCATATCATGTGAGTTATTTTGTGATTGGGTTACCTCACTCGTCATAAGCCATTGCTaGAAGAAGAAAGTTTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LISECISCELFCDWVTSLVISHC*KKKVFH Trigger: ATGGAAAACTTTCTTCTTGCAGCAATGGCTTATGAC...GAGTGAGGTAACCCAATCACAAAATAACTCACATGATATGCACTCACTGATAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| CDS-3UTR CCA 90 bp | TTCCATCTCAGCTCCAAACTTTACCTCTGTAACTCCTTCCATGGGTATTTTGTTATCACAAAACACAAATaGAGTTTCATGATGTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: FHLSSKLYLCNSFHGYFVITKHK*SFMMSV Trigger: CACAGACATCATGAAACTCCATTTGTGTTTTGTGAT...AACAAAATACCCATGGAAGGAGTTACAGAGGTAAAGTTTGGAGCTGAGATGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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| 3UTR CAA 72 bp | AAGAGACAGAATGATGTAACAGATGCCTTGACATTTTaGTATGACATAGCAAGTGGTTCTTTCATTTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: KRQNDVTDALTF*YDIASGSFILS Trigger: ACTCAAAATGAAAGAACCACTTGCTATGTCATACAAAAATGTCAAGGCATCTGTTACATCATTCTGTCTCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213834.2 |
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