Pregenerated sensors for OLFR851 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052625Ensembl transcript IDs: ENSMUST00000064582.6, ENSMUST00000214130.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCAGAGATGGAAGGAAAGGCCATCCACCTAGTTATCCATTCTATATaGAGACACCAATCCCAGGTAATATTGTTGATGCCAAGAAGTGCT | + |
|
Preference number: 1 (lower is better) Translates to: SEMEGKAIHLVIHSI*RHQSQVILLMPRSA Trigger: AGCACTTCTTGGCATCAACAATATTACCTGGGATTGGTGTCTGCATATAGAATGGATAACTAGGTGGATGGCCTTTCCTTCCATCTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR CCA 90 bp | CCTCTTGTAGGTATCTTGAATTGTCTGAACATCATTCAGGAAAGCTaGCCTTTACTGAGTATCCTCAGTAGTCTATGCTGTATATATAAT | + |
|
Preference number: 1 (lower is better) Translates to: PLVGILNCLNIIQES*PLLSILSSLCCIYN Trigger: ATTATATATACAGCATAGACTACTGAGGATACTCAGTAAAGGCCAGCTTTCCTGAATGATGTTCAGACAATTCAAGATACCTACAAGAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGGAGCATGTGTCCTTGTTATATGTTGGAGCATCTTTGGGTATATGTCCAGGAAAGTGGGTAGGTGGGTaGGGAAGCACCCTCACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: VEHVSLLYVGASLGICPGKWVGG*GSTLTE Trigger: TTCTGTGAGGGTGCTTCCCCACCCACCTACCCACTT...TCCTGGACATATACCCAAAGATGCTCCAACATATAACAAGGACACATGCTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CCA 90 bp | GATTCAGAGATGGAAGGAAAGGCCATCCACCTAGTTATCCATTCTATATGCAGATTGGAAGTGGGTAGGTaGGTGGGGAAGCACCCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: DSEMEGKAIHLVIHSICRLEVGR*VGKHPH Trigger: GTGAGGGTGCTTCCCCACCCACCTACCCACTTCCAA...TCTGCATATAGAATGGATAACTAGGTGGATGGCCTTTCCTTCCATCTCTGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGGAGCATGTGTCCTTGTTATATGTTGGAGCATCTTTGGGTATATGTCCAGGAACAGTGAGTTGGAAGTaGGTAGGTGGGTGGGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: VEHVSLLYVGASLGICPGTVSWK*VGGWGS Trigger: GCTTCCCCACCCACCTACCCACTTCCAACTCACTGT...TCCTGGACATATACCCAAAGATGCTCCAACATATAACAAGGACACATGCTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CCA 90 bp | GATTCAGAGATGGAAGGAAAGGCCATCCACCTAGTTATCCATTCTATATGCAGAGATAGGACAGTGAGTTaGAAGTGGGTAGGTGGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: DSEMEGKAIHLVIHSICRDRTVS*KWVGGW Trigger: CCACCCACCTACCCACTTCCAACTCACTGTCCTATC...TCTGCATATAGAATGGATAACTAGGTGGATGGCCTTTCCTTCCATCTCTGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTGAGGATGACCTTGTCTaGCATCAGTGGGAGGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFEDDLV*HQWEGR Trigger: CCTCCCCTCCCACTGATGCCAGACAAGGTCATCCTC...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTACAGGAGGTAGATGGTaGGAGGGACCTGGGGTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFTGGRW*EGPGVK Trigger: CTTCACCCCAGGTCCCTCCCACCATCTACCTCCTGT...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGGAGCATGTGTCCTTGTTATATGTTGGAGCATCTTTGGGTATATGTCCAGGACCCACACAGATAACCTaGACTCTTAGCTCCAAACAA | + |
|
Preference number: 2 (lower is better) Translates to: VEHVSLLYVGASLGICPGPTQIT*TLSSKQ Trigger: TTGTTTGGAGCTAAGAGTTCAGGTTATCTGTGTGGG...TCCTGGACATATACCCAAAGATGCTCCAACATATAACAAGGACACATGCTCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGGAGCATGTGTCCTTGTTATATGTTGGAGCATCTTTGGGTATATGTCCAGGAGCATCTGCTGTCACCTaGGTTTTTGATCTTAGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: VEHVSLLYVGASLGICPGASAVT*VFDLSH Trigger: ATGACTAAGATCAAAAACTCAGGTGACAGCAGATGC...TCCTGGACATATACCCAAAGATGCTCCAACATATAACAAGGACACATGCTCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGGAGCATGTGTCCTTGTTATATGTTGGAGCATCTTTGGGTATATGTCCAGGATTATGTTCAGTTTTCTaGGGAAGAGCCAGACTGACT | + |
|
Preference number: 2 (lower is better) Translates to: VEHVSLLYVGASLGICPGLCSVF*GRARLT Trigger: AGTCAGTCTGGCTCTTCCTCAGAAAACTGAACATAA...TCCTGGACATATACCCAAAGATGCTCCAACATATAACAAGGACACATGCTCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR TCA 90 bp | GATTCAGAGATGGAAGGAAAGGCCATCCACCTAGTTATCCATTCTATATGCAGAAAAGCTGGCCTTTACTaGGTATCCTCAGTAGTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: DSEMEGKAIHLVIHSICRKAGLY*VSSVVY Trigger: ATAGACTACTGAGGATACTCAGTAAAGGCCAGCTTT...TCTGCATATAGAATGGATAACTAGGTGGATGGCCTTTCCTTCCATCTCTGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGGAGCATGTGTCCTTGTTATATGTTGGAGCATCTTTGGGTATATGTCCAGGAAGAAGACCAGAAAATTaGACAGAGGTGTGTAGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: VEHVSLLYVGASLGICPGRRPEN*TEVCSN Trigger: ATTGCTACACACCTCTGTTCAATTTTCTGGTCTTCT...TCCTGGACATATACCCAAAGATGCTCCAACATATAACAAGGACACATGCTCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTGGTGAAGAGACGAGGTaGAAGGCAAAAGAGGGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFGEETR*KAKEGD Trigger: ATCTCCCTCTTTTGCCTTTCACCTCGTCTCTTCACC...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CCA 90 bp | GATTCAGAGATGGAAGGAAAGGCCATCCACCTAGTTATCCATTCTATATGCAGAATCATTCAGGAAAGCTaGCCTTTACTGAGTATCCTC | + |
|
Preference number: 2 (lower is better) Translates to: DSEMEGKAIHLVIHSICRIIQES*PLLSIL Trigger: GAGGATACTCAGTAAAGGCCAGCTTTCCTGAATGAT...TCTGCATATAGAATGGATAACTAGGTGGATGGCCTTTCCTTCCATCTCTGAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR TCA 90 bp | GATTCAGAGATGGAAGGAAAGGCCATCCACCTAGTTATCCATTCTATATGCAGAATGTCTACTGTGGTATaGCTGATGGTTTACAATTGC | + |
|
Preference number: 2 (lower is better) Translates to: DSEMEGKAIHLVIHSICRMSTVV*LMVYNC Trigger: GCAATTGTAAACCATCAGTCATACCACAGTAGACAT...TCTGCATATAGAATGGATAACTAGGTGGATGGCCTTTCCTTCCATCTCTGAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTATATGTAGCAGAGGATaGCCTTGTCTGGCATCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFICSRG*PCLASV Trigger: CACTGATGCCAGACAAGGTCATCCTCTGCTACATAT...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR TCA 90 bp | GATTCAGAGATGGAAGGAAAGGCCATCCACCTAGTTATCCATTCTATATGCAGAGATATAAATATCTCCTaGAAGTCTCTGCCAGAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: DSEMEGKAIHLVIHSICRDINIS*KSLPES Trigger: AGACTCTGGCAGAGACTTTCAGGAGATATTTATATC...TCTGCATATAGAATGGATAACTAGGTGGATGGCCTTTCCTTCCATCTCTGAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR TCA 90 bp | GATTCAGAGATGGAAGGAAAGGCCATCCACCTAGTTATCCATTCTATATGCAGATTTGAGGAAGTCTTTTaGGTTACTTTCAGAACTTCC | + |
|
Preference number: 2 (lower is better) Translates to: DSEMEGKAIHLVIHSICRFEEVF*VTFRTS Trigger: GGAAGTTCTGAAAGTAACTCAAAAGACTTCCTCAAA...TCTGCATATAGAATGGATAACTAGGTGGATGGCCTTTCCTTCCATCTCTGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTGTAGTTGGGATGATCTaGGCCTCTTGTAGGTATCTT | + |
|
Preference number: 2 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFVVGMI*ASCRYL Trigger: AAGATACCTACAAGAGGCTCAGATCATCCCAACTAC...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR TCA 90 bp | GATTCAGAGATGGAAGGAAAGGCCATCCACCTAGTTATCCATTCTATATGCAGAGCAGAGAGGAAACTATaGAGGGGGATAATATTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: DSEMEGKAIHLVIHSICRAERKL*RGIIFK Trigger: TTTAAATATTATCCCCCTTCATAGTTTCCTCTCTGC...TCTGCATATAGAATGGATAACTAGGTGGATGGCCTTTCCTTCCATCTCTGAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGGAGCATGTGTCCTTGTTATATGTTGGAGCATCTTTGGGTATATGTCCAGGATATTTTTGTCACATGTaGCATCTACATTGCTATGAC | + |
|
Preference number: 2 (lower is better) Translates to: VEHVSLLYVGASLGICPGYFCHM*HLHCYD Trigger: GTCATAGCAATGTAGATGCCACATGTGACAAAAATA...TCCTGGACATATACCCAAAGATGCTCCAACATATAACAAGGACACATGCTCCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CCA 90 bp | GATTCAGAGATGGAAGGAAAGGCCATCCACCTAGTTATCCATTCTATATGCAGAACTAAAGAATACACATaGATTGACACATGGGTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: DSEMEGKAIHLVIHSICRTKEYT*IDTWVQ Trigger: CTGAACCCATGTGTCAATCCATGTGTATTCTTTAGT...TCTGCATATAGAATGGATAACTAGGTGGATGGCCTTTCCTTCCATCTCTGAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTACATTGATTCAGAGATaGAAGGAAAGGCCATCCACC | + |
|
Preference number: 2 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFTLIQR*KERPST Trigger: GGTGGATGGCCTTTCCTTCCATCTCTGAATCAATGT...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTAGAATACACATGGATTaGCACATGGGTTCAGCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFRIHMD*HMGSAS Trigger: TGAAGCTGAACCCATGTGTCAATCCATGTGTATTCT...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CCA 90 bp | GATTCAGAGATGGAAGGAAAGGCCATCCACCTAGTTATCCATTCTATATGCAGAGAGACTCACTTTGTCTaGGTTAATGGAAATAAACTA | + |
|
Preference number: 2 (lower is better) Translates to: DSEMEGKAIHLVIHSICRETHFV*VNGNKL Trigger: TAGTTTATTTCCATTAACCCAGACAAAGTGAGTCTC...TCTGCATATAGAATGGATAACTAGGTGGATGGCCTTTCCTTCCATCTCTGAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR CAA 90 bp | GCTATTATAAATAAGGTTGCTATGAATACAGTGGAGCATGTGTCCTaGTTATATGTTGGAGCATCTTTGGGTATATGTCCAGGAGTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: AIINKVAMNTVEHVS*LYVGASLGICPGVV Trigger: TACTACTCCTGGACATATACCCAAAGATGCTCCAACATATAACAAGGACACATGCTCCACTGTATTCATAGCAACCTTATTTATAATAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTCAGCCATTGAGGTTATaGCTCAGTAAATTAGAACAC | + |
|
Preference number: 2 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFQPLRL*LSKLEH Trigger: GTGTTCTAATTTACTGAGGCATAACCTCAATGGCTG...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTCAATATAGGTGTGGATaGTTACAGCCAACCTTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFQYRCG*LQPTFR Trigger: TCTAAAGGTTGGCTGTAAGCATCCACACCTATATTG...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTAATAAACATGGCATTTaGCTTCAGAGTAGAGGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFNKHGI*LQSRGE Trigger: TTCACCTCTACTCTGAAGTCAAATGCCATGTTTATT...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR CCA 72 bp | ATGACCTTGTCTGGCATCAGTGGGAGGGGAGGCCCTTaGTCCTGTGAAGGCTTAATGCCTCAGTGTAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: MTLSGISGRGGP*SCEGLMPQCKE Trigger: TTCCTTACACTGAGGCATTAAGCCTTCACAGGACCAAGGGCCTCCCCTCCCACTGATGCCAGACAAGGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR GCA 72 bp | AGAGCCAGACTGACTTCCAGAGTTGTTGTACCAGCTTaGAATCCCACCAGTAATGGAGGAGTTTTCCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RARLTSRVVVPA*NPTSNGGVFLF Trigger: AAAGAGGAAAACTCCTCCATTACTGGTGGGATTGCAAGCTGGTACAACAACTCTGGAAGTCAGTCTGGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR GCA 72 bp | GGAGTTAGGGAAAGGACTGAAGGAGCTGAAGGGGTTTaGAACCCCATAGGAAGAACAACAATATTAACCAAC | + |
|
Preference number: 3 (lower is better) Translates to: GVRERTEGAEGV*NPIGRTTILTN Trigger: GTTGGTTAATATTGTTGTTCTTCCTATGGGGTTGCAAACCCCTTCAGCTCCTTCAGTCCTTTCCCTAACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR CCA 72 bp | CAGAAAATTGAACAGAGGTGTGTAGCAATGGGGGATTaGGAACTGGTGTTAGCCACCAGAAAGTATCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: QKIEQRCVAMGD*ELVLATRKYQM Trigger: CATCTGATACTTTCTGGTGGCTAACACCAGTTCCCAATCCCCCATTGCTACACACCTCTGTTCAATTTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGAGCATGTGTCCTTGTTATATGTTGGAGCATCTTTGGGTATATGTCCAGGATTGGAAGCACAGCCATaGAGGTTATGCCTCAGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: VEHVSLLYVGASLGICPGLEAQP*RLCLSK Trigger: TTTACTGAGGCATAACCTCAATGGCTGTGCTTCCAA...TCCTGGACATATACCCAAAGATGCTCCAACATATAACAAGGACACATGCTCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGAGCATGTGTCCTTGTTATATGTTGGAGCATCTTTGGGTATATGTCCAGGAAGGACACTCAGAGTTTaGCCCCTGATATCCTGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: VEHVSLLYVGASLGICPGRTLRV*PLISCK Trigger: TTTACAGGATATCAGGGGCAAAACTCTGAGTGTCCT...TCCTGGACATATACCCAAAGATGCTCCAACATATAACAAGGACACATGCTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR GCA 72 bp | GAAGGAAAGGCCATCCACCTAGTTATCCATTCTATATaGAGACACCAATCCCAGGTAATATTGTTGATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: EGKAIHLVIHSI*RHQSQVILLMP Trigger: TGGCATCAACAATATTACCTGGGATTGGTGTCTGCATATAGAATGGATAACTAGGTGGATGGCCTTTCCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CAA 90 bp | GATTCAGAGATGGAAGGAAAGGCCATCCACCTAGTTATCCATTCTATATGCAGACAATCCCAGGTAATATaGTTGATGCCAAGAAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: DSEMEGKAIHLVIHSICRQSQVI*LMPRSA Trigger: AGCACTTCTTGGCATCAACAATATTACCTGGGATTG...TCTGCATATAGAATGGATAACTAGGTGGATGGCCTTTCCTTCCATCTCTGAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR TCA 72 bp | ACCTATGTCATAGGAGGACACTCAGAGTTTTGCCCCTaGTATCCTGTAAATATGGGATTATCTACAACTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TYVIGGHSEFCP*YPVNMGLSTTS Trigger: GGAAGTTGTAGATAATCCCATATTTACAGGATATCAGGGGCAAAACTCTGAGTGTCCTCCTATGACATAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CAA 90 bp | GATTCAGAGATGGAAGGAAAGGCCATCCACCTAGTTATCCATTCTATATGCAGAGACAGGGAGCTGAAATaGTCAAATAAGTTCTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: DSEMEGKAIHLVIHSICRDRELK*SNKFLK Trigger: CTTCAAGAACTTATTTGACAATTTCAGCTCCCTGTC...TCTGCATATAGAATGGATAACTAGGTGGATGGCCTTTCCTTCCATCTCTGAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CAA 90 bp | GATTCAGAGATGGAAGGAAAGGCCATCCACCTAGTTATCCATTCTATATGCAGATACCATAAATGGACGTaGGATGAGACTGTATCAATA | + |
|
Preference number: 3 (lower is better) Translates to: DSEMEGKAIHLVIHSICRYHKWT*DETVSI Trigger: TATTGATACAGTCTCATCCAACGTCCATTTATGGTA...TCTGCATATAGAATGGATAACTAGGTGGATGGCCTTTCCTTCCATCTCTGAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CAA 90 bp | GATTCAGAGATGGAAGGAAAGGCCATCCACCTAGTTATCCATTCTATATGCAGACCTCTTGTAGGTATCTaGAATTGTCTGAACATCATT | + |
|
Preference number: 3 (lower is better) Translates to: DSEMEGKAIHLVIHSICRPLVGI*NCLNII Trigger: AATGATGTTCAGACAATTCAAGATACCTACAAGAGG...TCTGCATATAGAATGGATAACTAGGTGGATGGCCTTTCCTTCCATCTCTGAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTTCCCAGGTAATATTGTaGATGCCAAGAAGTGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFSQVIL*MPRSAC Trigger: GCAAGCACTTCTTGGCATCAACAATATTACCTGGGA...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTAAGAATACACATGGATaGACACATGGGTTCAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFKNTHG*THGFSF Trigger: GAAGCTGAACCCATGTGTCAATCCATGTGTATTCTT...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR TCA 72 bp | ATTGTTGATGCCAAGAAGTGCTTGCTGACAAAAGTTTaGTATAAATATCTCCTGAAAGTCTCTGCCAGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: IVDAKKCLLTKV*YKYLLKVSARV Trigger: GACTCTGGCAGAGACTTTCAGGAGATATTTATATCAAACTTTTGTCAGCAAGCACTTCTTGGCATCAACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR CCA 72 bp | TATGAATACAGTGGAGCATGTGTCCTTGTTATATGTTaGAGCATCTTTGGGTATATGTCCAGGAGTAGTATA | + |
|
Preference number: 3 (lower is better) Translates to: YEYSGACVLVIC*SIFGYMSRSSI Trigger: TATACTACTCCTGGACATATACCCAAAGATGCTCCAACATATAACAAGGACACATGCTCCACTGTATTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTTGCATTTTCAATAAATaGGAAGCACAGCCATTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFCIFNK*EAQPLR Trigger: CCTCAATGGCTGTGCTTCCAATTTATTGAAAATGCA...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTTGCAACGATAACCCTTaGAGGAAGTCTTTTGAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFCNDNP*RKSFEL Trigger: TAACTCAAAAGACTTCCTCAAAGGGTTATCGTTGCA...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR TCA 72 bp | CCCCTGATAAATTGTTACACAGCAGAAATTCCTATTTaGAAGTTTACCATAAATGGACGTTGGATGAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: PLINCYTAEIPI*KFTINGRWMRL Trigger: CAGTCTCATCCAACGTCCATTTATGGTAAACTTTCAAATAGGAATTTCTGCTGTGTAACAATTTATCAGGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTTTTACCCCTGATAAATaGTTACACAGCAGAAATTCC | + |
|
Preference number: 3 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFFTPDK*LHSRNS Trigger: GGAATTTCTGCTGTGTAACAATTTATCAGGGGTAAA...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTTTGTTAGGACTCTCATaGCTTCTGTGTTGTTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFLLGLS*LLCCFL Trigger: AAGAAAACAACACAGAAGCAATGAGAGTCCTAACAA...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTTGTGTATCTATTCAGTaGTTAGGACTCTCATTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFCVSIQ*LGLSLL Trigger: AAGCAATGAGAGTCCTAACAACTGAATAGATACACA...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR TCA 72 bp | GACAATCTTTTGCATGTTGGATGGAACTTTAATAAATaGCTGAGCCACATTGAATCTGCAAGACAACTATTC | + |
|
Preference number: 3 (lower is better) Translates to: DNLLHVGWNFNK*LSHIESARQLF Trigger: GAATAGTTGTCTTGCAGATTCAATGTGGCTCAGTCATTTATTAAAGTTCCATCCAACATGCAAAAGATTGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| CDS-3UTR GCA 90 bp | GTGGAGCATGTGTCCTTGTTATATGTTGGAGCATCTTTGGGTATATGTCCAGGAGGACATTCTGTTCTGTaGAGAAGGACAGTGGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: VEHVSLLYVGASLGICPGGHSVL*RRTVAI Trigger: TATTGCCACTGTCCTTCTGCACAGAACAGAATGTCC...TCCTGGACATATACCCAAAGATGCTCCAACATATAACAAGGACACATGCTCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| CDS-3UTR GCA 90 bp | GTGGAGCATGTGTCCTTGTTATATGTTGGAGCATCTTTGGGTATATGTCCAGGAGTGGAAAATGCTTTATaGCTTCCACCAACTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VEHVSLLYVGASLGICPGVENAL*LPPTDG Trigger: CCCATCAGTTGGTGGAAGGCATAAAGCATTTTCCAC...TCCTGGACATATACCCAAAGATGCTCCAACATATAACAAGGACACATGCTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| CDS-3UTR CCA 90 bp | GTGGAGCATGTGTCCTTGTTATATGTTGGAGCATCTTTGGGTATATGTCCAGGATGTGCAGAAGGACAGTaGCAATACCAGAAGTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: VEHVSLLYVGASLGICPGCAEGQ*QYQKCM Trigger: CATACACTTCTGGTATTGCCACTGTCCTTCTGCACA...TCCTGGACATATACCCAAAGATGCTCCAACATATAACAAGGACACATGCTCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| CDS-3UTR CCA 90 bp | GTGGAGCATGTGTCCTTGTTATATGTTGGAGCATCTTTGGGTATATGTCCAGGAGTTCAACAGCAACTTTaGGACTGTTGTTGTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VEHVSLLYVGASLGICPGVQQQL*DCCCAC Trigger: ACAAGCACAACAACAGTCCCAAAGTTGCTGTTGAAC...TCCTGGACATATACCCAAAGATGCTCCAACATATAACAAGGACACATGCTCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| CDS-3UTR GCA 90 bp | GTGGAGCATGTGTCCTTGTTATATGTTGGAGCATCTTTGGGTATATGTCCAGGAATCCCAATGATGAGCTaGCTCAAGGATCCTTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: VEHVSLLYVGASLGICPGIPMMS*LKDPFI Trigger: AATAAAAGGATCCTTGAGGCAGCTCATCATTGGGAT...TCCTGGACATATACCCAAAGATGCTCCAACATATAACAAGGACACATGCTCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| CDS-3UTR CCA 90 bp | GTGGAGCATGTGTCCTTGTTATATGTTGGAGCATCTTTGGGTATATGTCCAGGACTCTGGTCATGTACTTaGATGTTCAACAGCAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: VEHVSLLYVGASLGICPGLWSCT*MFNSNF Trigger: AAAGTTGCTGTTGAACATCCAAGTACATGACCAGAG...TCCTGGACATATACCCAAAGATGCTCCAACATATAACAAGGACACATGCTCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR CAA 72 bp | CAGGGACTAAACCACTTACTAAAGAATACACATGGATaGACACATGGGTTCAGCTTCATATGTAGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGLNHLLKNTHG*THGFSFICSRG Trigger: TCCTCTGCTACATATGAAGCTGAACCCATGTGTCAATCCATGTGTATTCTTTAGTAAGTGGTTTAGTCCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| CDS-3UTR TCA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTCATAAGCCATCACAGTaGGGAGACAGCTTTCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFHKPSQ*GDSFLK Trigger: TTTTAGAAAGCTGTCTCCTCACTGTGATGGCTTATG...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| CDS-3UTR TCA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTAGCAGGAAAGCTTTGTaGTTTGACCAAGCTCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFSRKAL*FDQAHK Trigger: TTTGTGAGCTTGGTCAAATCACAAAGCTTTCCTGCT...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR CAA 72 bp | AATAAGGTTGCTATGAATACAGTGGAGCATGTGTCCTaGTTATATGTTGGAGCATCTTTGGGTATATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NKVAMNTVEHVS*LYVGASLGICP Trigger: TGGACATATACCCAAAGATGCTCCAACATATAACAAGGACACATGCTCCACTGTATTCATAGCAACCTTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR CAA 72 bp | CTATCAGGCTACATACTTTTAGACAGGGAGCTGAAATaGTCAAATAAGTTCTTGAAGACAGCTTTTTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSGYILLDRELK*SNKFLKTAFYH Trigger: GTGGTAAAAAGCTGTCTTCAAGAACTTATTTGACAATTTCAGCTCCCTGTCTAAAAGTATGTAGCCTGATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR CAA 72 bp | AATCTTATGAAAGGAGGGGTCTGTGTATCTATTCAGTaGTTAGGACTCTCATTGCTTCTGTGTTGTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NLMKGGVCVSIQ*LGLSLLLCCFL Trigger: AAGAAAACAACACAGAAGCAATGAGAGTCCTAACAACTGAATAGATACACAGACCCCTCCTTTCATAAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| CDS-3UTR GCA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTACACACCTAAACCAGTaGCATAGAATAAAGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFTHLNQ*HRIKIP Trigger: TGGTATCTTTATTCTATGGCACTGGTTTAGGTGTGT...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| CDS-3UTR CCA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTAATACCAGAAGTGTATaGAGTAGTGCATTTATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFNTRSV*SSAFIV Trigger: CACTATAAATGCACTACTCCATACACTTCTGGTATT...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| 3UTR CAA 72 bp | ATGTTTCCCTGTGCATGTACACATAGAAGACATGTATaGACAATGGATATATATACCTCACTCAGGATGATT | + |
|
Preference number: 4 (lower is better) Translates to: MFPCACTHRRHV*TMDIYTSLRMI Trigger: AATCATCCTGAGTGAGGTATATATATCCATTGTCAATACATGTCTTCTATGTGTACATGCACAGGGAAACAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| CDS-3UTR CAA 90 bp | GATTCAGAGATGGAAGGAAAGGCCATCCACCTAGTTATCCATTCTATATGCAGATGTTCAACAGCAACTTaGGGACTGTTGTTGTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DSEMEGKAIHLVIHSICRCSTAT*GLLLCL Trigger: CAAGCACAACAACAGTCCCAAAGTTGCTGTTGAACA...TCTGCATATAGAATGGATAACTAGGTGGATGGCCTTTCCTTCCATCTCTGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| CDS CCA 90 bp | ACATTCTGTTCTGTGCAGAAGGACAGTGGCAATACCAGAAGTGTATaGAGTAGTGCATTTATAGTGCTGATGATCAGGGAAAGTAATACT | + |
|
Preference number: 5 (lower is better) Translates to: TFCSVQKDSGNTRSV*SSAFIVLMIRESNT Trigger: AGTATTACTTTCCCTGATCATCAGCACTATAAATGCACTACTCCATACACTTCTGGTATTGCCACTGTCCTTCTGCACAGAACAGAATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064582.6 ENSMUST00000214130.2 |
||
| CDS-3UTR CAA 90 bp | CTTAGTCATTCCATAAGAAGCTCAAAACAAAGGAAGACCAAAGTGTGGATGTTTAGCTCACAAAAGAAGTaGGGGACATTCTGTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSHSIRSSKQRKTKVWMFSSQKK*GTFCSV Trigger: CACAGAACAGAATGTCCCCAACTTCTTTTGTGAGCT...AAACATCCACACTTTGGTCTTCCTTTGTTTTGAGCTTCTTATGGAATGACTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214130.2 |
||
| CDS GCA 72 bp | CAAGCTCACAAAAGAAGTTGGGGACATTCTGTTCTGTaGAGAAGGACAGTGGCAATACCAGAAGTGTATGGA | + |
|
Preference number: 6 (lower is better) Translates to: QAHKRSWGHSVL*RRTVAIPEVYG Trigger: TCCATACACTTCTGGTATTGCCACTGTCCTTCTGCACAGAACAGAATGTCCCCAACTTCTTTTGTGAGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064582.6 ENSMUST00000214130.2 |
||
| CDS CAA 90 bp | TACCTGAGACAAGCAGCCTATATAAGTGATGCTCTGGTCATGTACTaGGATGTTCAACAGCAACTTTGGGACTGTTGTTGTGCTTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: YLRQAAYISDALVMY*DVQQQLWDCCCACA Trigger: TGCACAAGCACAACAACAGTCCCAAAGTTGCTGTTGAACATCCAAGTACATGACCAGAGCATCACTTATATAGGCTGCTTGTCTCAGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064582.6 ENSMUST00000214130.2 |
||
| CDS CAA 72 bp | CAAGCAGCCTATATAAGTGATGCTCTGGTCATGTACTaGGATGTTCAACAGCAACTTTGGGACTGTTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: QAAYISDALVMY*DVQQQLWDCCC Trigger: ACAACAACAGTCCCAAAGTTGCTGTTGAACATCCAAGTACATGACCAGAGCATCACTTATATAGGCTGCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064582.6 ENSMUST00000214130.2 |
||
| CDS TCA 72 bp | AGAGGGGTTGCAGTTCAGGGACATATATTAGTCCTATaGGAAAGAATTCTGAAATACCTGTTTGGTTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RGVAVQGHILVL*ERILKYLFGLQ Trigger: CTGCAAACCAAACAGGTATTTCAGAATTCTTTCTCATAGGACTAATATATGTCCCTGAACTGCAACCCCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064582.6 ENSMUST00000214130.2 |
||