RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR846 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000058692

Ensembl transcript IDs: ENSMUST00000214810.2

Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTGGAGAACAGCCAGGATCACCTGTGGTTGAGTTGGGGAAAAGCTaGAAGAAGCTGTGGAGCAGAGCAGCCTCATGGGAAGACCAGCAG +
Preference number: 1 (lower is better)
Translates to: CGEQPGSPVVELGKS*KKLWSRAASWEDQQ
Trigger: CTGCTGGTCTTCCCATGAGGCTGCTCTGCTCCACAGCTTCTTCCAGCTTTTCCCCAACTCAACCACAGGTGATCCTGGCTGTTCTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CCA 90 bp AGGGAGGGAGGGACTTCTTTTGGAGAGGGCACAGGGAGGTACAGCTaGGAACATGATCAGGTGATATGTGTGGGGTGGACAGGAGTGTCT +
Preference number: 1 (lower is better)
Translates to: REGGTSFGEGTGRYS*EHDQVICVGWTGVS
Trigger: AGACACTCCTGTCCACCCCACACATATCACCTGATCATGTTCCCAGCTGTACCTCCCTGTGCCCTCTCCAAAAGAAGTCCCTCCCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR TCA 90 bp CTTTTGGAGAGGGCACAGGGAGGTACAGCTGGGAACATGATCAGGTaGTATGTGTGGGGTGGACAGGAGTGTCTTGAGTGCCAGCAGAAA +
Preference number: 1 (lower is better)
Translates to: LLERAQGGTAGNMIR*YVWGGQECLECQQK
Trigger: TTTCTGCTGGCACTCAAGACACTCCTGTCCACCCCACACATATCACCTGATCATGTTCCCAGCTGTACCTCCCTGTGCCCTCTCCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CCA 90 bp CAAATACTAGCTGTGGAGAACAGCCAGGATCACCTGTGGTTGAGTTaGGGAAAAGCTGGAAGAAGCTGTGGAGCAGAGCAGCCTCATGGG +
Preference number: 1 (lower is better)
Translates to: QILAVENSQDHLWLS*GKAGRSCGAEQPHG
Trigger: CCCATGAGGCTGCTCTGCTCCACAGCTTCTTCCAGCTTTTCCCCAACTCAACCACAGGTGATCCTGGCTGTTCTCCACAGCTAGTATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CCA 90 bp GGTCCAGTCACAGGCTCAAATTTGGATCCAGCTCAACTGGAGGCCTaGGACCCTGACACTCTTACTGATGCTTTGGTTGGCTTACAGACA +
Preference number: 1 (lower is better)
Translates to: GPVTGSNLDPAQLEA*DPDTLTDALVGLQT
Trigger: TGTCTGTAAGCCAACCAAAGCATCAGTAAGAGTGTCAGGGTCCCAGGCCTCCAGTTGAGCTGGATCCAAATTTGAGCCTGTGACTGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CCA 90 bp AGTCCAATGCAAATACTAGCTGTGGAGAACAGCCAGGATCACCTGTaGTTGAGTTGGGGAAAAGCTGGAAGAAGCTGTGGAGCAGAGCAG +
Preference number: 1 (lower is better)
Translates to: SPMQILAVENSQDHL*LSWGKAGRSCGAEQ
Trigger: CTGCTCTGCTCCACAGCTTCTTCCAGCTTTTCCCCAACTCAACCACAGGTGATCCTGGCTGTTCTCCACAGCTAGTATTTGCATTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CCA 90 bp AGAAAGAAGGTCCAGTCACAGGCTCAAATTTGGATCCAGCTCAACTaGAGGCCTGGGACCCTGACACTCTTACTGATGCTTTGGTTGGCT +
Preference number: 1 (lower is better)
Translates to: RKKVQSQAQIWIQLN*RPGTLTLLLMLWLA
Trigger: AGCCAACCAAAGCATCAGTAAGAGTGTCAGGGTCCCAGGCCTCCAGTTGAGCTGGATCCAAATTTGAGCCTGTGACTGGACCTTCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CCA 90 bp GGAGAAAATCATGAGAGAAAGAAGGTCCAGTCACAGGCTCAAATTTaGATCCAGCTCAACTGGAGGCCTGGGACCCTGACACTCTTACTG +
Preference number: 1 (lower is better)
Translates to: GENHERKKVQSQAQI*IQLNWRPGTLTLLL
Trigger: CAGTAAGAGTGTCAGGGTCCCAGGCCTCCAGTTGAGCTGGATCCAAATTTGAGCCTGTGACTGGACCTTCTTTCTCTCATGATTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR GCA 90 bp GGAAATTTGTATAGTCTAGCTCCAGTGGAGGAGCAGGGATGGGTTTaGATTCCCATAGTCAAGAGCTCTGACCCAGAATTGATCCAATCT +
Preference number: 1 (lower is better)
Translates to: GNLYSLAPVEEQGWV*IPIVKSSDPELIQS
Trigger: AGATTGGATCAATTCTGGGTCAGAGCTCTTGACTATGGGAATGCAAACCCATCCCTGCTCCTCCACTGGAGCTAGACTATACAAATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CCA 90 bp AAATGGGGAAATTTGTATAGTCTAGCTCCAGTGGAGGAGCAGGGATaGGTTTGCATTCCCATAGTCAAGAGCTCTGACCCAGAATTGATC +
Preference number: 1 (lower is better)
Translates to: KWGNLYSLAPVEEQG*VCIPIVKSSDPELI
Trigger: GATCAATTCTGGGTCAGAGCTCTTGACTATGGGAATGCAAACCCATCCCTGCTCCTCCACTGGAGCTAGACTATACAAATTTCCCCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR TCA 90 bp CTGAGTTTGACTTCTAGCAATAATTTCAGGCAGCTTACAATAAGCTaGAACTCCAGTATCAGGAATATCCAAGCCCTCTACTTTCACCAT +
Preference number: 1 (lower is better)
Translates to: LSLTSSNNFRQLTIS*NSSIRNIQALYFHH
Trigger: ATGGTGAAAGTAGAGGGCTTGGATATTCCTGATACTGGAGTTTCAGCTTATTGTAAGCTGCCTGAAATTATTGCTAGAAGTCAAACTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR GCA 90 bp AATGAGACTTTGAAAAGCCTAATTGGTCCCATTGGCAATGTACTTTaGCTTAGAGTAGCTTTCCAATTTTATGAGGTCACATTTATGAAT +
Preference number: 1 (lower is better)
Translates to: NETLKSLIGPIGNVL*LRVAFQFYEVTFMN
Trigger: ATTCATAAATGTGACCTCATAAAATTGGAAAGCTACTCTAAGGCAAAGTACATTGCCAATGGGACCAATTAGGCTTTTCAAAGTCTCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CCA 90 bp TTTTCCACCATGTTCATAGTGACCTTGTTTGTGATAGACAGAAACTaGAAACATATGTACTGGAATGAAAGAATAGATACAGAAAGTGAG +
Preference number: 1 (lower is better)
Translates to: FSTMFIVTLFVIDRN*KHMYWNERIDTESE
Trigger: CTCACTTTCTGTATCTATTCTTTCATTCCAGTACATATGTTTCCAGTTTCTGTCTATCACAAACAAGGTCACTATGAACATGGTGGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR GCA 90 bp TCCCCTGCTTCTATGAGGGTGCTCCCCCACCCACCCACTACAACCTCACTGCCCGTGAAGACATACTCTTaGAGACAGGGGAGGAGTTAT +
Preference number: 2 (lower is better)
Translates to: SPASMRVLPHPPTTTSLPVKTYS*RQGRSY
Trigger: ATAACTCCTCCCCTGTCTGCAAGAGTATGTCTTCAC...GGGCAGTGAGGTTGTAGTGGGTGGGTGGGGGAGCACCCTCATAGAAGCAGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CAA 90 bp GCAAATACTAGCTGTGGAGAACAGCCAGGATCACCTGTGGTTGAGTaGGGGAAAAGCTGGAAGAAGCTGTGGAGCAGAGCAGCCTCATGG +
Preference number: 2 (lower is better)
Translates to: ANTSCGEQPGSPVVE*GKSWKKLWSRAASW
Trigger: CCATGAGGCTGCTCTGCTCCACAGCTTCTTCCAGCTTTTCCCCAACTCAACCACAGGTGATCCTGGCTGTTCTCCACAGCTAGTATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR TCA 90 bp TCCCCTGCTTCTATGAGGGTGCTCCCCCACCCACCCACTACAACCTCACTGCCCAAATGGAGAAAATCATaGGAGAAAGAAGGTCCAGTC +
Preference number: 2 (lower is better)
Translates to: SPASMRVLPHPPTTTSLPKWRKS*EKEGPV
Trigger: GACTGGACCTTCTTTCTCTCATGATTTTCTCCATTT...GGGCAGTGAGGTTGTAGTGGGTGGGTGGGGGAGCACCCTCATAGAAGCAGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CAA 90 bp CCAATGCAAATACTAGCTGTGGAGAACAGCCAGGATCACCTGTGGTaGAGTTGGGGAAAAGCTGGAAGAAGCTGTGGAGCAGAGCAGCCT +
Preference number: 2 (lower is better)
Translates to: PMQILAVENSQDHLW*SWGKAGRSCGAEQP
Trigger: AGGCTGCTCTGCTCCACAGCTTCTTCCAGCTTTTCCCCAACTCAACCACAGGTGATCCTGGCTGTTCTCCACAGCTAGTATTTGCATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR CCA 90 bp TCTCCACTGACCCAAACCCCCAAATTCTCTCAGAAAATGATCCAACGACTAGGCGTAGGCCTGGTGGCATaGGGGTGGGAATGTGAAGAC +
Preference number: 2 (lower is better)
Translates to: SPLTQTPKFSQKMIQRLGVGLVA*GWECED
Trigger: GTCTTCACATTCCCACCCCCATGCCACCAGGCCTAC...GCCTAGTCGTTGGATCATTTTCTGAGAGAATTTGGGGGTTTGGGTCAGTGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR CCA 90 bp GAGCAGGGATGGGTTTGCATTCCCATAGTCAAGAGCTCTGACCCAGAATTGATCAGCAGAGCAGCCTCATaGGAAGACCAGCAGTCTCCA +
Preference number: 2 (lower is better)
Translates to: EQGWVCIPIVKSSDPELISRAAS*EDQQSP
Trigger: TGGAGACTGCTGGTCTTCCCATGAGGCTGCTCTGCT...GATCAATTCTGGGTCAGAGCTCTTGACTATGGGAATGCAAACCCATCCCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR CCA 90 bp TCCCCTGCTTCTATGAGGGTGCTCCCCCACCCACCCACTACAACCTCACTGCCCGGCTCATTTACACAATaGAATACTACTCAGCTATTA +
Preference number: 2 (lower is better)
Translates to: SPASMRVLPHPPTTTSLPGSFTQ*NTTQLL
Trigger: TAATAGCTGAGTAGTATTCCATTGTGTAAATGAGCC...GGGCAGTGAGGTTGTAGTGGGTGGGTGGGGGAGCACCCTCATAGAAGCAGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR TCA 90 bp AAAGAGAGAGAGAGAGAGAGAGAGGATAGAGAGAGAGAGAGGGTAGGAAGAGAAGGGAACATGATCAGGTaGTATGTGTGGGGTGGACAG +
Preference number: 2 (lower is better)
Translates to: KEREREREDRERERVGREGNMIR*YVWGGQ
Trigger: CTGTCCACCCCACACATATCACCTGATCATGTTCCC...TTCTCTTCCTACCCTCTCTCTCTCTCTATCCTCTCTCTCTCTCTCTCTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR CCA 90 bp CCTTCCTTCCAATTTCCTTACTACAAACCTTCTAATCCATTCTCCCCTCCCCTGCTGGTGGCATGGGGGTaGGAATGTGAAGACATACTC +
Preference number: 2 (lower is better)
Translates to: PSFQFPYYKPSNPFSPPLLVAWG*ECEDIL
Trigger: GAGTATGTCTTCACATTCCCACCCCCATGCCACCAG...CAGGGGAGGGGAGAATGGATTAGAAGGTTTGTAGTAAGGAAATTGGAAGGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR TCA 90 bp AAAGAGAGAGAGAGAGAGAGAGAGGATAGAGAGAGAGAGAGGGTAGGAAGAGAAATGGGGGTGGGAATGTaGAGACATACTCTTGCAGAC +
Preference number: 2 (lower is better)
Translates to: KEREREREDRERERVGREMGVGM*RHTLAD
Trigger: GTCTGCAAGAGTATGTCTTCACATTCCCACCCCCAT...TTCTCTTCCTACCCTCTCTCTCTCTCTATCCTCTCTCTCTCTCTCTCTCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR TCA 90 bp AAAGAGAGAGAGAGAGAGAGAGAGGATAGAGAGAGAGAGAGGGTAGGAAGAGAATGGACAGGAGTGTCTTaGGTGCCAGCAGAAAGAATG +
Preference number: 2 (lower is better)
Translates to: KEREREREDRERERVGREWTGVS*VPAERM
Trigger: CATTCTTTCTGCTGGCACTCAAGACACTCCTGTCCA...TTCTCTTCCTACCCTCTCTCTCTCTCTATCCTCTCTCTCTCTCTCTCTCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR GCA 90 bp CCTTCCTTCCAATTTCCTTACTACAAACCTTCTAATCCATTCTCCCCTCCCCTGGAGCAGGGATGGGTTTaGATTCCCATAGTCAAGAGC +
Preference number: 2 (lower is better)
Translates to: PSFQFPYYKPSNPFSPPLEQGWV*IPIVKS
Trigger: GCTCTTGACTATGGGAATGCAAACCCATCCCTGCTC...CAGGGGAGGGGAGAATGGATTAGAAGGTTTGTAGTAAGGAAATTGGAAGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR CCA 90 bp AAAGAGAGAGAGAGAGAGAGAGAGGATAGAGAGAGAGAGAGGGTAGGAAGAGAAGAGTTGGGGAAAAGCTaGAAGAAGCTGTGGAGCAGA +
Preference number: 2 (lower is better)
Translates to: KEREREREDRERERVGREELGKS*KKLWSR
Trigger: TCTGCTCCACAGCTTCTTCCAGCTTTTCCCCAACTC...TTCTCTTCCTACCCTCTCTCTCTCTCTATCCTCTCTCTCTCTCTCTCTCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR CCA 90 bp AAAGAGAGAGAGAGAGAGAGAGAGGATAGAGAGAGAGAGAGGGTAGGAAGAGAAGACAGGAGCCTAACATaGCTAACCTCTGAGAGACTC +
Preference number: 2 (lower is better)
Translates to: KEREREREDRERERVGREDRSLT*LTSERL
Trigger: GAGTCTCTCAGAGGTTAGCCATGTTAGGCTCCTGTC...TTCTCTTCCTACCCTCTCTCTCTCTCTATCCTCTCTCTCTCTCTCTCTCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR TCA 90 bp CCTTCCTTCCAATTTCCTTACTACAAACCTTCTAATCCATTCTCCCCTCCCCTGAACATGGCTAACCTCTaGGAGACTCAACGAGAAGCT +
Preference number: 2 (lower is better)
Translates to: PSFQFPYYKPSNPFSPPLNMANL*ETQREA
Trigger: AGCTTCTCGTTGAGTCTCTCAGAGGTTAGCCATGTT...CAGGGGAGGGGAGAATGGATTAGAAGGTTTGTAGTAAGGAAATTGGAAGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR CCA 90 bp AAAGAGAGAGAGAGAGAGAGAGAGGATAGAGAGAGAGAGAGGGTAGGAAGAGAATCACAGGCTCAAATTTaGATCCAGCTCAACTGGAGG +
Preference number: 2 (lower is better)
Translates to: KEREREREDRERERVGRESQAQI*IQLNWR
Trigger: CCTCCAGTTGAGCTGGATCCAAATTTGAGCCTGTGA...TTCTCTTCCTACCCTCTCTCTCTCTCTATCCTCTCTCTCTCTCTCTCTCTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR GCA 90 bp AAAGAGAGAGAGAGAGAGAGAGAGGATAGAGAGAGAGAGAGGGTAGGAAGAGAACAGGAGTGTCTTGAGTaGCAGCAGAAAGAATGGAAA +
Preference number: 2 (lower is better)
Translates to: KEREREREDRERERVGREQECLE*QQKEWK
Trigger: TTTCCATTCTTTCTGCTGGCACTCAAGACACTCCTG...TTCTCTTCCTACCCTCTCTCTCTCTCTATCCTCTCTCTCTCTCTCTCTCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR GCA 90 bp AAAGAGAGAGAGAGAGAGAGAGAGGATAGAGAGAGAGAGAGGGTAGGAAGAGAACAATACCAGTGGGATTaGCAACTGGTAAAACCACTC +
Preference number: 2 (lower is better)
Translates to: KEREREREDRERERVGREQYQWD*QLVKPL
Trigger: GAGTGGTTTTACCAGTTGGCAATCCCACTGGTATTG...TTCTCTTCCTACCCTCTCTCTCTCTCTATCCTCTCTCTCTCTCTCTCTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CAA 90 bp GAGAGGATGTGGAGAGAGAGGAACATTCTTCCAATACCAGTGGGATaGCCAACTGGTAAAACCACTCTAGAAATCAATCTGGAGATTCCT +
Preference number: 2 (lower is better)
Translates to: ERMWRERNILPIPVG*PTGKTTLEINLEIP
Trigger: AGGAATCTCCAGATTGATTTCTAGAGTGGTTTTACCAGTTGGCAATCCCACTGGTATTGGAAGAATGTTCCTCTCTCTCCACATCCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR TCA 90 bp AACAAGGGCATAATGAGTTTTGCATGCAAATCGTTGGAACTAGAAAATATTGTCGGAGGTGAAAGACTCTaGGGACTCAAAGGGAGGGAC +
Preference number: 2 (lower is better)
Translates to: NKGIMSFACKSLELENIVGGERL*GLKGRD
Trigger: GTCCCTCCCTTTGAGTCCTCAGAGTCTTTCACCTCC...GACAATATTTTCTAGTTCCAACGATTTGCATGCAAAACTCATTATGCCCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR TCA 90 bp CCTTCCTTCCAATTTCCTTACTACAAACCTTCTAATCCATTCTCCCCTCCCCTGACTAACCCTACATCTTaGAGTACTCAAGAAGCTAAC +
Preference number: 2 (lower is better)
Translates to: PSFQFPYYKPSNPFSPPLTNPTS*STQEAN
Trigger: GTTAGCTTCTTGAGTACTTCAAGATGTAGGGTTAGT...CAGGGGAGGGGAGAATGGATTAGAAGGTTTGTAGTAAGGAAATTGGAAGGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR TCA 90 bp CTCTTTTCCATTTTCTCTTCTATTGGAACAAATCAGCAACTTACAGATTGGGAACCCCAACCACTTCAATaGATCAGCACTTTTTCTCCC +
Preference number: 2 (lower is better)
Translates to: LFSIFSSIGTNQQLTDWEPQPLQ*ISTFSP
Trigger: GGGAGAAAAAGTGCTGATTCATTGAAGTGGTTGGGG...TTCCCAATCTGTAAGTTGCTGATTTGTTCCAATAGAAGAGAAAATGGAAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR CAA 90 bp TCCCCTGCTTCTATGAGGGTGCTCCCCCACCCACCCACTACAACCTCACTGCCCTCACCTGTGGTTGAGTaGGGGAAAAGCTGGAAGAAG +
Preference number: 3 (lower is better)
Translates to: SPASMRVLPHPPTTTSLPSPVVE*GKSWKK
Trigger: CTTCTTCCAGCTTTTCCCCAACTCAACCACAGGTGA...GGGCAGTGAGGTTGTAGTGGGTGGGTGGGGGAGCACCCTCATAGAAGCAGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CCA 72 bp GCTGTGGAGAACAGCCAGGATCACCTGTGGTTGAGTTaGGGAAAAGCTGGAAGAAGCTGTGGAGCAGAGCAG +
Preference number: 3 (lower is better)
Translates to: AVENSQDHLWLS*GKAGRSCGAEQ
Trigger: CTGCTCTGCTCCACAGCTTCTTCCAGCTTTTCCCCAACTCAACCACAGGTGATCCTGGCTGTTCTCCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR TCA 72 bp GGTGTAGGTAGGCCTGGTGGCATGGGGGTGGGAATGTaGAGACATACTCTTGCAGACAGGGGAGGAGTTATA +
Preference number: 3 (lower is better)
Translates to: GVGRPGGMGVGM*RHTLADRGGVI
Trigger: TATAACTCCTCCCCTGTCTGCAAGAGTATGTCTTCACATTCCCACCCCCATGCCACCAGGCCTACCTACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CCA 72 bp GGGACTTCTTTTGGAGAGGGCACAGGGAGGTACAGCTaGGAACATGATCAGGTGATATGTGTGGGGTGGACA +
Preference number: 3 (lower is better)
Translates to: GTSFGEGTGRYS*EHDQVICVGWT
Trigger: TGTCCACCCCACACATATCACCTGATCATGTTCCCAGCTGTACCTCCCTGTGCCCTCTCCAAAAGAAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR TCA 72 bp GGGGATCAAGCCTTCACAGGACCAAGGGCCTCCCCTTaGTTGATATTGATGCCATATAAGGCCATCCTCTGC +
Preference number: 3 (lower is better)
Translates to: GDQAFTGPRASP*LILMPYKAILC
Trigger: GCAGAGGATGGCCTTATATGGCATCAATATCAATCAAGGGGAGGCCCTTGGTCCTGTGAAGGCTTGATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CCA 72 bp ACAGGCTCAAATTTGGATCCAGCTCAACTGGAGGCCTaGGACCCTGACACTCTTACTGATGCTTTGGTTGGC +
Preference number: 3 (lower is better)
Translates to: TGSNLDPAQLEA*DPDTLTDALVG
Trigger: GCCAACCAAAGCATCAGTAAGAGTGTCAGGGTCCCAGGCCTCCAGTTGAGCTGGATCCAAATTTGAGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CCA 72 bp GTCCAGTCACAGGCTCAAATTTGGATCCAGCTCAACTaGAGGCCTGGGACCCTGACACTCTTACTGATGCTT +
Preference number: 3 (lower is better)
Translates to: VQSQAQIWIQLN*RPGTLTLLLML
Trigger: AAGCATCAGTAAGAGTGTCAGGGTCCCAGGCCTCCAGTTGAGCTGGATCCAAATTTGAGCCTGTGACTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CCA 72 bp CATGAGAGAAAGAAGGTCCAGTCACAGGCTCAAATTTaGATCCAGCTCAACTGGAGGCCTGGGACCCTGACA +
Preference number: 3 (lower is better)
Translates to: HERKKVQSQAQI*IQLNWRPGTLT
Trigger: TGTCAGGGTCCCAGGCCTCCAGTTGAGCTGGATCCAAATTTGAGCCTGTGACTGGACCTTCTTTCTCTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR GCA 72 bp TGGTGGCATGGGGGTGGGAATGTGAAGACATACTCTTaGAGACAGGGGAGGAGTTATAGGATAGGGATCAGT +
Preference number: 3 (lower is better)
Translates to: WWHGGGNVKTYS*RQGRSYRIGIS
Trigger: ACTGATCCCTATCCTATAACTCCTCCCCTGTCTGCAAGAGTATGTCTTCACATTCCCACCCCCATGCCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR CAA 90 bp GAGCAGGGATGGGTTTGCATTCCCATAGTCAAGAGCTCTGACCCAGAATTGATCGTCACAGGCTCAAATTaGGATCCAGCTCAACTGGAG +
Preference number: 3 (lower is better)
Translates to: EQGWVCIPIVKSSDPELIVTGSN*DPAQLE
Trigger: CTCCAGTTGAGCTGGATCCAAATTTGAGCCTGTGAC...GATCAATTCTGGGTCAGAGCTCTTGACTATGGGAATGCAAACCCATCCCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR TCA 72 bp ACATACACAGCAGAGGACTACCTGGTCTGGCCTCAGTaGGAGAAGAAGCACCTAATCCTGCAGAGACTTGAA +
Preference number: 3 (lower is better)
Translates to: TYTAEDYLVWPQ*EKKHLILQRLE
Trigger: TTCAAGTCTCTGCAGGATTAGGTGCTTCTTCTCTCACTGAGGCCAGACCAGGTAGTCCTCTGCTGTGTATGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR TCA 72 bp GATCAGGTGATATGTGTGGGGTGGACAGGAGTGTCTTaGGTGCCAGCAGAAAGAATGGAAACAGGCAACCTA +
Preference number: 3 (lower is better)
Translates to: DQVICVGWTGVS*VPAERMETGNL
Trigger: TAGGTTGCCTGTTTCCATTCTTTCTGCTGGCACTCAAGACACTCCTGTCCACCCCACACATATCACCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR GCA 72 bp TATAGTCTAGCTCCAGTGGAGGAGCAGGGATGGGTTTaGATTCCCATAGTCAAGAGCTCTGACCCAGAATTG +
Preference number: 3 (lower is better)
Translates to: YSLAPVEEQGWV*IPIVKSSDPEL
Trigger: CAATTCTGGGTCAGAGCTCTTGACTATGGGAATGCAAACCCATCCCTGCTCCTCCACTGGAGCTAGACTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CCA 72 bp CAAATACTAGCTGTGGAGAACAGCCAGGATCACCTGTaGTTGAGTTGGGGAAAAGCTGGAAGAAGCTGTGGA +
Preference number: 3 (lower is better)
Translates to: QILAVENSQDHL*LSWGKAGRSCG
Trigger: TCCACAGCTTCTTCCAGCTTTTCCCCAACTCAACCACAGGTGATCCTGGCTGTTCTCCACAGCTAGTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CCA 72 bp AATTTGTATAGTCTAGCTCCAGTGGAGGAGCAGGGATaGGTTTGCATTCCCATAGTCAAGAGCTCTGACCCA +
Preference number: 3 (lower is better)
Translates to: NLYSLAPVEEQG*VCIPIVKSSDP
Trigger: TGGGTCAGAGCTCTTGACTATGGGAATGCAAACCCATCCCTGCTCCTCCACTGGAGCTAGACTATACAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR CAA 90 bp AAAGAGAGAGAGAGAGAGAGAGAGGATAGAGAGAGAGAGAGGGTAGGAAGAGAATCAAAGGGAGGGACCTaGGATGAAGTATTCTATGGT +
Preference number: 3 (lower is better)
Translates to: KEREREREDRERERVGRESKGGT*DEVFYG
Trigger: ACCATAGAATACTTCATCCAAGGTCCCTCCCTTTGA...TTCTCTTCCTACCCTCTCTCTCTCTCTATCCTCTCTCTCTCTCTCTCTCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR-3UTR CAA 90 bp CCTTCCTTCCAATTTCCTTACTACAAACCTTCTAATCCATTCTCCCCTCCCCTGCCTCAAAATGAGACTTaGAAAAGCCTAATTGGTCCC +
Preference number: 3 (lower is better)
Translates to: PSFQFPYYKPSNPFSPPLPQNET*KSLIGP
Trigger: GGGACCAATTAGGCTTTTCAAAGTCTCATTTTGAGG...CAGGGGAGGGGAGAATGGATTAGAAGGTTTGTAGTAAGGAAATTGGAAGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR TCA 72 bp ACTTCTAGCAATAATTTCAGGCAGCTTACAATAAGCTaGAACTCCAGTATCAGGAATATCCAAGCCCTCTAC +
Preference number: 3 (lower is better)
Translates to: TSSNNFRQLTIS*NSSIRNIQALY
Trigger: GTAGAGGGCTTGGATATTCCTGATACTGGAGTTTCAGCTTATTGTAAGCTGCCTGAAATTATTGCTAGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR GCA 72 bp TTGAAAAGCCTAATTGGTCCCATTGGCAATGTACTTTaGCTTAGAGTAGCTTTCCAATTTTATGAGGTCACA +
Preference number: 3 (lower is better)
Translates to: LKSLIGPIGNVL*LRVAFQFYEVT
Trigger: TGTGACCTCATAAAATTGGAAAGCTACTCTAAGGCAAAGTACATTGCCAATGGGACCAATTAGGCTTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CAA 72 bp AGCTGTGGAGAACAGCCAGGATCACCTGTGGTTGAGTaGGGGAAAAGCTGGAAGAAGCTGTGGAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SCGEQPGSPVVE*GKSWKKLWSRA
Trigger: TGCTCTGCTCCACAGCTTCTTCCAGCTTTTCCCCAACTCAACCACAGGTGATCCTGGCTGTTCTCCACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
CDS-3UTR TCA 90 bp GCCTGGTGGCATGGGGGTGGGAATGTGAAGACATACTCTTGCAGACAGGGGAGGGAGACAACTGAAAGGTaGGACCCACAAGTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: AWWHGGGNVKTYSCRQGRETTER*DPQVEK
Trigger: CTTTTCTACTTGTGGGTCTCACCTTTCAGTTGTCTC...CCTCCCCTGTCTGCAAGAGTATGTCTTCACATTCCCACCCCCATGCCACCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CAA 72 bp ATACTAGCTGTGGAGAACAGCCAGGATCACCTGTGGTaGAGTTGGGGAAAAGCTGGAAGAAGCTGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: ILAVENSQDHLW*SWGKAGRSCGA
Trigger: TGCTCCACAGCTTCTTCCAGCTTTTCCCCAACTCAACCACAGGTGATCCTGGCTGTTCTCCACAGCTAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
CDS-3UTR TCA 90 bp GAGCAGGGATGGGTTTGCATTCCCATAGTCAAGAGCTCTGACCCAGAATTGATCGACACTGTAGTTGTCTaGGGGAAAACAGCAATTGAA +
Preference number: 4 (lower is better)
Translates to: EQGWVCIPIVKSSDPELIDTVVV*GKTAIE
Trigger: TTCAATTGCTGTTTTCCCTCAGACAACTACAGTGTC...GATCAATTCTGGGTCAGAGCTCTTGACTATGGGAATGCAAACCCATCCCTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CAA 72 bp GAGGTGAAAGACTCTGAGGACTCAAAGGGAGGGACCTaGGATGAAGTATTCTATGGTGGAAATGGGGAAATT +
Preference number: 4 (lower is better)
Translates to: EVKDSEDSKGGT*DEVFYGGNGEI
Trigger: AATTTCCCCATTTCCACCATAGAATACTTCATCCAAGGTCCCTCCCTTTGAGTCCTCAGAGTCTTTCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
CDS-3UTR TCA 90 bp CTGACCCAAACCCCCAAATTCTCTCAGAAAATGATCCAACGACTAGGCAGCATAAAAGGGTTCAACATTTaGGGGAGCACTGTGTACATA +
Preference number: 4 (lower is better)
Translates to: LTQTPKFSQKMIQRLGSIKGFNI*GSTVYI
Trigger: TATGTACACAGTGCTCCCTCAAATGTTGAACCCTTT...TATGCTGCCTAGTCGTTGGATCATTTTCTGAGAGAATTTGGGGGTTTGGGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
CDS-3UTR CCA 90 bp TCTCCACTGACCCAAACCCCCAAATTCTCTCAGAAAATGATCCAACGACTAGGCAGCAGATCACAGAAGTaGGGATTCATAATTACTGTG +
Preference number: 4 (lower is better)
Translates to: SPLTQTPKFSQKMIQRLGSRSQK*GFIITV
Trigger: CACAGTAATTATGAATCCCCACTTCTGTGATCTGCT...GCCTAGTCGTTGGATCATTTTCTGAGAGAATTTGGGGGTTTGGGTCAGTGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
CDS-3UTR GCA 90 bp TCTCCACTGACCCAAACCCCCAAATTCTCTCAGAAAATGATCCAACGACTAGGCCAGATAAAAGTAATATaGACCTGTTTGGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SPLTQTPKFSQKMIQRLGQIKVI*TCLVSR
Trigger: CCTGGAAACCAAACAGGTGCATATTACTTTTATCTG...GCCTAGTCGTTGGATCATTTTCTGAGAGAATTTGGGGGTTTGGGTCAGTGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
3UTR CAA 72 bp TGGAGAGAGAGGAACATTCTTCCAATACCAGTGGGATaGCCAACTGGTAAAACCACTCTAGAAATCAATCTG +
Preference number: 4 (lower is better)
Translates to: WRERNILPIPVG*PTGKTTLEINL
Trigger: CAGATTGATTTCTAGAGTGGTTTTACCAGTTGGCAATCCCACTGGTATTGGAAGAATGTTCCTCTCTCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
CDS-3UTR TCA 90 bp AACAAGGGCATAATGAGTTTTGCATGCAAATCGTTGGAACTAGAAAATATTGTCGGCAACCTGTGTAACTaGTGCTCTGATCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: NKGIMSFACKSLELENIVGNLCN*CSDPVC
Trigger: ACACACAGGATCAGAGCATCAGTTACACAGGTTGCC...GACAATATTTTCTAGTTCCAACGATTTGCATGCAAAACTCATTATGCCCTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
CDS-3UTR GCA 90 bp CTCTTTTCCATTTTCTCTTCTATTGGAACAAATCAGCAACTTACAGATTGGGAAGCGGTCATAGGCCATTaGAGCAAGGATACAGCTTTC +
Preference number: 4 (lower is better)
Translates to: LFSIFSSIGTNQQLTDWEAVIGH*SKDTAF
Trigger: GAAAGCTGTATCCTTGCTGCAATGGCCTATGACCGC...TTCCCAATCTGTAAGTTGCTGATTTGTTCCAATAGAAGAGAAAATGGAAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
CDS-3UTR TCA 90 bp AACAAGGGCATAATGAGTTTTGCATGCAAATCGTTGGAACTAGAAAATATTGTCGCAGATGTCAGCAAATaGAAGTTTGGAGAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: NKGIMSFACKSLELENIVADVSK*KFGEKV
Trigger: CACTTTCTCTCCAAACTTTCATTTGCTGACATCTGC...GACAATATTTTCTAGTTCCAACGATTTGCATGCAAAACTCATTATGCCCTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
CDS-3UTR TCA 90 bp ACCACTTCAATGAATCAGCACTTTTTCTCCCTTAATTCCATTGACTATCCTTTTAGGGAAAACAGCAATTaGAGAGCTAATATAAACTCC +
Preference number: 4 (lower is better)
Translates to: TTSMNQHFFSLNSIDYPFRENSN*RANINS
Trigger: GGAGTTTATATTAGCTCTTCAATTGCTGTTTTCCCT...AAAAGGATAGTCAATGGAATTAAGGGAGAAAAAGTGCTGATTCATTGAAGTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
CDS-3UTR CAA 90 bp TCCCCTGCTTCTATGAGGGTGCTCCCCCACCCACCCACTACAACCTCACTGCCCAAAAGGGTTCAACATTaGAGGGAGCACTGTGTACAT +
Preference number: 5 (lower is better)
Translates to: SPASMRVLPHPPTTTSLPKRVQH*REHCVH
Trigger: ATGTACACAGTGCTCCCTCAAATGTTGAACCCTTTT...GGGCAGTGAGGTTGTAGTGGGTGGGTGGGGGAGCACCCTCATAGAAGCAGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
CDS-3UTR CAA 90 bp GAGCAGGGATGGGTTTGCATTCCCATAGTCAAGAGCTCTGACCCAGAATTGATCCAAGTAGAAAAGGCTTaGTACTTTCCTCTAAGGGAA +
Preference number: 5 (lower is better)
Translates to: EQGWVCIPIVKSSDPELIQVEKA*YFPLRE
Trigger: TTCCCTTAGAGGAAAGTACAAAGCCTTTTCTACTTG...GATCAATTCTGGGTCAGAGCTCTTGACTATGGGAATGCAAACCCATCCCTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
CDS-3UTR CAA 90 bp GAGCAGGGATGGGTTTGCATTCCCATAGTCAAGAGCTCTGACCCAGAATTGATCAGAGAAAGTGATACATaGGTGTTTGTAGATGAGAGT +
Preference number: 5 (lower is better)
Translates to: EQGWVCIPIVKSSDPELIRESDT*VFVDES
Trigger: ACTCTCATCTACAAACACCAATGTATCACTTTCTCT...GATCAATTCTGGGTCAGAGCTCTTGACTATGGGAATGCAAACCCATCCCTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2
CDS-3UTR CAA 90 bp CTGACCCAAACCCCCAAATTCTCTCAGAAAATGATCCAACGACTAGGCAGCATAGAGGAAGTTCATTATTaGTGCAAAATGATAGTCGCA +
Preference number: 5 (lower is better)
Translates to: LTQTPKFSQKMIQRLGSIEEVHY*CKMIVA
Trigger: TGCGACTATCATTTTGCACAAATAATGAACTTCCTC...TATGCTGCCTAGTCGTTGGATCATTTTCTGAGAGAATTTGGGGGTTTGGGTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214810.2