Pregenerated sensors for OLFR845 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061614Ensembl transcript IDs: ENSMUST00000071259.3, ENSMUST00000213344.2, ENSMUST00000215572.3
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTCCCAAGACCAAGGGCATCTCCTCCCATTGATGGCCAACTAGGCAATCCTCTGGAGAGACACAAACTCTaGGGGTACTGGTTAGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: FPRPRASPPIDGQLGNPLERHKL*GYWLVH Trigger: ATGAACTAACCAGTACCCCCAGAGTTTGTGTCTCTC...CAGAGGATTGCCTAGTTGGCCATCAATGGGAGGAGATGCCCTTGGTCTTGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCTATAGGGTTGCACATCCCTTTAGCTCCTTGGGTTCTTTCTCTAGCTCACATGGCAGGGAAGCCTaGAATTTGCAAGATTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: SSYRVAHPFSSLGSFSSSHGREA*NLQDSE Trigger: TTCTGAATCTTGCAAATTTCAGGCTTCCCTGCCATG...TGAGCTAGAGAAAGAACCCAAGGAGCTAAAGGGATGTGCAACCCTATAGGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR GCA 90 bp | TTCCCAAGACCAAGGGCATCTCCTCCCATTGATGGCCAACTAGGCAATCCTCTGGGGAAGCCTGAAATTTaGAAGATTCAGAAGATCTTT | + |
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Preference number: 2 (lower is better) Translates to: FPRPRASPPIDGQLGNPLGKPEI*KIQKIF Trigger: AAAGATCTTCTGAATCTTGCAAATTTCAGGCTTCCC...CAGAGGATTGCCTAGTTGGCCATCAATGGGAGGAGATGCCCTTGGTCTTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCTATAGGGTTGCACATCCCTTTAGCTCCTTGGGTTCTTTCTCTAGCTCAAATAGGAGAGATGTGTaGGTAAGAGTTTGTTCACCC | + |
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Preference number: 2 (lower is better) Translates to: SSYRVAHPFSSLGSFSSSNRRDV*VRVCSP Trigger: GGGTGAACAAACTCTTACTCACACATCTCTCCTATT...TGAGCTAGAGAAAGAACCCAAGGAGCTAAAGGGATGTGCAACCCTATAGGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR CAA 90 bp | AAACTCTGGGGGTACTGGTTAGTTCATATTGTTCCTCCTATAGGGTaGCACATCCCTTTAGCTCCTTGGGTTCTTTCTCTAGCTCATTCA | + |
|
Preference number: 2 (lower is better) Translates to: KLWGYWLVHIVPPIG*HIPLAPWVLSLAHS Trigger: TGAATGAGCTAGAGAAAGAACCCAAGGAGCTAAAGGGATGTGCAACCCTATAGGAGGAACAATATGAACTAACCAGTACCCCCAGAGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCTATAGGGTTGCACATCCCTTTAGCTCCTTGGGTTCTTTCTCTAGCTCAGAAACAAGATTTCCATaGCAGGGAAGCCTGAAATTT | + |
|
Preference number: 2 (lower is better) Translates to: SSYRVAHPFSSLGSFSSSETRFP*QGSLKF Trigger: AAATTTCAGGCTTCCCTGCCATGGAAATCTTGTTTC...TGAGCTAGAGAAAGAACCCAAGGAGCTAAAGGGATGTGCAACCCTATAGGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR GCA 90 bp | ATTCAGAAGATCTTTCCCAATGTTATTGAATCAGAAATCAGCTGCTGGGTCTGTACACTAACCACCATGTaGTCAGGACTGTGGACCTTC | + |
|
Preference number: 2 (lower is better) Translates to: IQKIFPNVIESEISCWVCTLTTM*SGLWTF Trigger: GAAGGTCCACAGTCCTGAGCACATGGTGGTTAGTGT...ACAGACCCAGCAGCTGATTTCTGATTCAATAACATTGGGAAAGATCTTCTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCTATAGGGTTGCACATCCCTTTAGCTCCTTGGGTTCTTTCTCTAGCTCAGAAATCCAGATAGGGTaGGGAAAAATAACTGAATTC | + |
|
Preference number: 2 (lower is better) Translates to: SSYRVAHPFSSLGSFSSSEIQIG*GKITEF Trigger: GAATTCAGTTATTTTTCCCCACCCTATCTGGATTTC...TGAGCTAGAGAAAGAACCCAAGGAGCTAAAGGGATGTGCAACCCTATAGGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCTATAGGGTTGCACATCCCTTTAGCTCCTTGGGTTCTTTCTCTAGCTCAAGTCTTCATCTGTGCTaGAATGAACTTTTTAGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SSYRVAHPFSSLGSFSSSSLHLC*NELFSV Trigger: AACACTAAAAAGTTCATTCCAGCACAGATGAAGACT...TGAGCTAGAGAAAGAACCCAAGGAGCTAAAGGGATGTGCAACCCTATAGGAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR CCA 90 bp | ATTCAGAAGATCTTTCCCAATGTTATTGAATCAGAAATCAGCTGCTGGGTCTGTATGTGCTCAGGACTGTaGACCTTCCTGATATTCATG | + |
|
Preference number: 2 (lower is better) Translates to: IQKIFPNVIESEISCWVCMCSGL*TFLIFM Trigger: CATGAATATCAGGAAGGTCCACAGTCCTGAGCACAT...ACAGACCCAGCAGCTGATTTCTGATTCAATAACATTGGGAAAGATCTTCTGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR CAA 90 bp | ATTACTTTGTCTGTCATGGATAACATATCTGGCATGAGTAAATGTTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCATATGTGTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: ITLSVMDNISGMSKC*CVCVCVCVCCICVL Trigger: CAACACACATATGCAACACACACACACACACACACACACACACAAACATTTACTCATGCCAGATATGTTATCCATGACAGACAAAGTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR CAA 90 bp | AGTCTTCATCTGTGCTGGAATGAACTTTTTAGTGTTGAGGCTTTTTaGAGTCATCCTGCACCAATAAGTAACTCTTCAACTATACTCCCA | + |
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Preference number: 2 (lower is better) Translates to: SLHLCWNELFSVEAF*SHPAPISNSSTILP Trigger: TGGGAGTATAGTTGAAGAGTTACTTATTGGTGCAGGATGACTCAAAAAAGCCTCAACACTAAAAAGTTCATTCCAGCACAGATGAAGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR TCA 90 bp | CTCTTCAACTATACTCCCATTAGTGACCACAATACAAACTTATTGATCCACCAAAATAGGAGAGATGTGTaGGTAAGAGTTTGTTCACCC | + |
|
Preference number: 2 (lower is better) Translates to: LFNYTPISDHNTNLLIHQNRRDV*VRVCSP Trigger: GGGTGAACAAACTCTTACTCACACATCTCTCCTATT...TTGGTGGATCAATAAGTTTGTATTGTGGTCACTAATGGGAGTATAGTTGAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGTGTGTGTTGCATATGTGTGTTGTAACAGTCCAAGAAAAGTCTCTCATCTTGGTAAATTGCATATaGTATGCTACCACATATCTC | + |
|
Preference number: 2 (lower is better) Translates to: CVCVLHMCVVTVQEKSLILVNCI*YATTYL Trigger: GAGATATGTGGTAGCATAGCATATGCAATTTACCAA...GATGAGAGACTTTTCTTGGACTGTTACAACACACATATGCAACACACACACACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR CCA 90 bp | ATTCAGAAGATCTTTCCCAATGTTATTGAATCAGAAATCAGCTGCTGGGTCTGTGAAATCCAGATAGGGTaGGGAAAAATAACTGAATTC | + |
|
Preference number: 2 (lower is better) Translates to: IQKIFPNVIESEISCWVCEIQIG*GKITEF Trigger: GAATTCAGTTATTTTTCCCCACCCTATCTGGATTTC...ACAGACCCAGCAGCTGATTTCTGATTCAATAACATTGGGAAAGATCTTCTGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR CCA 90 bp | CCACTCATGGAAATCCAGATAGGGTGGGGAAAAATAACTGAATTCAATCCAAAAGTTTCATTATTGTCCTaGAAGAGTTCTCTGGATTTA | + |
|
Preference number: 2 (lower is better) Translates to: PLMEIQIGWGKITEFNPKVSLLS*KSSLDL Trigger: TAAATCCAGAGAACTCTTCCAGGACAATAATGAAAC...TTTTGGATTGAATTCAGTTATTTTTCCCCACCCTATCTGGATTTCCATGAGTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR CCA 90 bp | ATTCAGAAGATCTTTCCCAATGTTATTGAATCAGAAATCAGCTGCTGGGTCTGTGTTTCATTATTGTCCTaGAAGAGTTCTCTGGATTTA | + |
|
Preference number: 2 (lower is better) Translates to: IQKIFPNVIESEISCWVCVSLLS*KSSLDL Trigger: TAAATCCAGAGAACTCTTCCAGGACAATAATGAAAC...ACAGACCCAGCAGCTGATTTCTGATTCAATAACATTGGGAAAGATCTTCTGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR CAA 90 bp | TTCCCAAGACCAAGGGCATCTCCTCCCATTGATGGCCAACTAGGCAATCCTCTGCATCCCTTTAGCTCCTaGGGTTCTTTCTCTAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: FPRPRASPPIDGQLGNPLHPFSS*GSFSSS Trigger: TGAGCTAGAGAAAGAACCCAAGGAGCTAAAGGGATG...CAGAGGATTGCCTAGTTGGCCATCAATGGGAGGAGATGCCCTTGGTCTTGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR CAA 90 bp | TTCCCAAGACCAAGGGCATCTCCTCCCATTGATGGCCAACTAGGCAATCCTCTGAGTGTTGAGGCTTTTTaGAGTCATCCTGCACCAATA | + |
|
Preference number: 3 (lower is better) Translates to: FPRPRASPPIDGQLGNPLSVEAF*SHPAPI Trigger: TATTGGTGCAGGATGACTCAAAAAAGCCTCAACACT...CAGAGGATTGCCTAGTTGGCCATCAATGGGAGGAGATGCCCTTGGTCTTGGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR CAA 90 bp | TCCTCCTATAGGGTTGCACATCCCTTTAGCTCCTTGGGTTCTTTCTCTAGCTCAGTGCCCGTTTCATTATaGTCCTGGAAGAGTTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSYRVAHPFSSLGSFSSSVPVSL*SWKSSL Trigger: CAGAGAACTCTTCCAGGACAATAATGAAACGGGCAC...TGAGCTAGAGAAAGAACCCAAGGAGCTAAAGGGATGTGCAACCCTATAGGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR CAA 90 bp | TTCCCAAGACCAAGGGCATCTCCTCCCATTGATGGCCAACTAGGCAATCCTCTGCTCTCATCAAATATGTaGTGTGCACCTAACACATTT | + |
|
Preference number: 3 (lower is better) Translates to: FPRPRASPPIDGQLGNPLLSSNM*CAPNTF Trigger: AAATGTGTTAGGTGCACACAACATATTTGATGAGAG...CAGAGGATTGCCTAGTTGGCCATCAATGGGAGGAGATGCCCTTGGTCTTGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR CAA 90 bp | TGTGTGTGTGTGTTGCATATGTGTGTTGTAACAGTCCAAGAAAAGTCTCTCATCGTGCCCGTTTCATTATaGTCCTGGAAGAGTTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: CVCVLHMCVVTVQEKSLIVPVSL*SWKSSL Trigger: CAGAGAACTCTTCCAGGACAATAATGAAACGGGCAC...GATGAGAGACTTTTCTTGGACTGTTACAACACACATATGCAACACACACACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR CAA 90 bp | CATCCTGCACCAATAAGTAACTCTTCAACTATACTCCCATTAGTGACCACAATATTTATGCTGAGTCCCTaGAAATCCAGCCACTATGGC | + |
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Preference number: 3 (lower is better) Translates to: HPAPISNSSTILPLVTTIFMLSP*KSSHYG Trigger: GCCATAGTGGCTGGATTTCAAGGGACTCAGCATAAA...TATTGTGGTCACTAATGGGAGTATAGTTGAAGAGTTACTTATTGGTGCAGGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR CAA 90 bp | CTCTTCAACTATACTCCCATTAGTGACCACAATACAAACTTATTGATCCACCAATTTATGCTGAGTCCCTaGAAATCCAGCCACTATGGC | + |
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Preference number: 3 (lower is better) Translates to: LFNYTPISDHNTNLLIHQFMLSP*KSSHYG Trigger: GCCATAGTGGCTGGATTTCAAGGGACTCAGCATAAA...TTGGTGGATCAATAAGTTTGTATTGTGGTCACTAATGGGAGTATAGTTGAAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR CAA 90 bp | ATTCAGAAGATCTTTCCCAATGTTATTGAATCAGAAATCAGCTGCTGGGTCTGTGGCATGAGTAAATGTTaGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: IQKIFPNVIESEISCWVCGMSKC*CVCVCV Trigger: CACACACACACACACACACAAACATTTACTCATGCC...ACAGACCCAGCAGCTGATTTCTGATTCAATAACATTGGGAAAGATCTTCTGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR CAA 90 bp | ATTCAGAAGATCTTTCCCAATGTTATTGAATCAGAAATCAGCTGCTGGGTCTGTTGTGTGAGTAAGAGTTaGTTCACCCACATTCATCGT | + |
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Preference number: 3 (lower is better) Translates to: IQKIFPNVIESEISCWVCCVSKS*FTHIHR Trigger: ACGATGAATGTGGGTGAACAAACTCTTACTCACACA...ACAGACCCAGCAGCTGATTTCTGATTCAATAACATTGGGAAAGATCTTCTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR GCA 72 bp | GGAAACAAGATTTCCATGGCAGGGAAGCCTGAAATTTaGAAGATTCAGAAGATCTTTCCCAATGTTATTGAA | + |
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Preference number: 3 (lower is better) Translates to: GNKISMAGKPEI*KIQKIFPNVIE Trigger: TTCAATAACATTGGGAAAGATCTTCTGAATCTTGCAAATTTCAGGCTTCCCTGCCATGGAAATCTTGTTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR-3UTR CAA 90 bp | CATCCTGCACCAATAAGTAACTCTTCAACTATACTCCCATTAGTGACCACAATACTCTCATCAAATATGTaGTGTGCACCTAACACATTT | + |
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Preference number: 3 (lower is better) Translates to: HPAPISNSSTILPLVTTILSSNM*CAPNTF Trigger: AAATGTGTTAGGTGCACACAACATATTTGATGAGAG...TATTGTGGTCACTAATGGGAGTATAGTTGAAGAGTTACTTATTGGTGCAGGATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR TCA 90 bp | TTCCCAAGACCAAGGGCATCTCCTCCCATTGATGGCCAACTAGGCAATCCTCTGAGCAGGCAAGCTTTATaGTCTGAGCAAGTTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: FPRPRASPPIDGQLGNPLSRQAL*SEQVHR Trigger: TCTGTGAACTTGCTCAGATCATAAAGCTTGCCTGCT...CAGAGGATTGCCTAGTTGGCCATCAATGGGAGGAGATGCCCTTGGTCTTGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR CAA 72 bp | TGTTCCTCCTATAGGGTTGCACATCCCTTTAGCTCCTaGGGTTCTTTCTCTAGCTCATTCATTGGGGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: CSSYRVAHPFSS*GSFSSSFIGGP Trigger: AGGGCCCCCAATGAATGAGCTAGAGAAAGAACCCAAGGAGCTAAAGGGATGTGCAACCCTATAGGAGGAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR GCA 90 bp | TTCCCAAGACCAAGGGCATCTCCTCCCATTGATGGCCAACTAGGCAATCCTCTGGAGCAGAAATTCTATTaGATCTGTTTGATTGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: FPRPRASPPIDGQLGNPLEQKFY*ICLIGG Trigger: TCCACCAATCAAACAGATGCAATAGAATTTCTGCTC...CAGAGGATTGCCTAGTTGGCCATCAATGGGAGGAGATGCCCTTGGTCTTGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTTGCATATGTGTGTTGTAACAGTCCAAGAAAAGTCTCTCATCGTGCAGAAATTCAGATaGAGCACCATGAGACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: CVCVLHMCVVTVQEKSLIVQKFR*STMRLS Trigger: GCTCAGTCTCATGGTGCTGCATCTGAATTTCTGCAC...GATGAGAGACTTTTCTTGGACTGTTACAACACACATATGCAACACACACACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR GCA 90 bp | CATCCTGCACCAATAAGTAACTCTTCAACTATACTCCCATTAGTGACCACAATAGTGCAGAAATTCAGATaGAGCACCATGAGACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: HPAPISNSSTILPLVTTIVQKFR*STMRLS Trigger: GCTCAGTCTCATGGTGCTGCATCTGAATTTCTGCAC...TATTGTGGTCACTAATGGGAGTATAGTTGAAGAGTTACTTATTGGTGCAGGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR GCA 90 bp | TTCCCAATGTTATTGAATCAGAAATCAGCTGCTGGGTCTGTAGACACTAACCACGTGGAAAATGCTTTATaGCTTCCTTGCCTTGATGGA | + |
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Preference number: 4 (lower is better) Translates to: FPMLLNQKSAAGSVDTNHVENAL*LPCLDG Trigger: TCCATCAAGGCAAGGAAGGCATAAAGCATTTTCCAC...GTGGTTAGTGTCTACAGACCCAGCAGCTGATTTCTGATTCAATAACATTGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR TCA 90 bp | CCACTCATGGAAATCCAGATAGGGTGGGGAAAAATAACTGAATTCAATCCAAAACTTTGGGACTGTAGTTaGGCTTATACAGATATCAGC | + |
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Preference number: 4 (lower is better) Translates to: PLMEIQIGWGKITEFNPKLWDCS*AYTDIS Trigger: GCTGATATCTGTATAAGCTCAACTACAGTCCCAAAG...TTTTGGATTGAATTCAGTTATTTTTCCCCACCCTATCTGGATTTCCATGAGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR TCA 90 bp | CATCCTGCACCAATAAGTAACTCTTCAACTATACTCCCATTAGTGACCACAATACTTTGGGACTGTAGTTaGGCTTATACAGATATCAGC | + |
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Preference number: 4 (lower is better) Translates to: HPAPISNSSTILPLVTTILWDCS*AYTDIS Trigger: GCTGATATCTGTATAAGCTCAACTACAGTCCCAAAG...TATTGTGGTCACTAATGGGAGTATAGTTGAAGAGTTACTTATTGGTGCAGGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTTGCATATGTGTGTTGTAACAGTCCAAGAAAAGTCTCTCATCATGCCTTCCTTGCCTTaGTGGAATTTTCAAAACAGA | + |
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Preference number: 4 (lower is better) Translates to: CVCVLHMCVVTVQEKSLIMPSLP*WNFQNR Trigger: TCTGTTTTGAAAATTCCATCAAGGCAAGGAAGGCAT...GATGAGAGACTTTTCTTGGACTGTTACAACACACATATGCAACACACACACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR GCA 90 bp | TTCCCAATGTTATTGAATCAGAAATCAGCTGCTGGGTCTGTAGACACTAACCACGAGCAGAAATTCTATTaGATCTGTTTGATTGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: FPMLLNQKSAAGSVDTNHEQKFY*ICLIGG Trigger: TCCACCAATCAAACAGATGCAATAGAATTTCTGCTC...GTGGTTAGTGTCTACAGACCCAGCAGCTGATTTCTGATTCAATAACATTGGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR GCA 90 bp | TTCCCAATGTTATTGAATCAGAAATCAGCTGCTGGGTCTGTAGACACTAACCACGCTTTATGCCTTCCTTaGCTTGATGGAATTTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: FPMLLNQKSAAGSVDTNHALCLP*LDGIFK Trigger: TTTGAAAATTCCATCAAGGCAAGGAAGGCATAAAGC...GTGGTTAGTGTCTACAGACCCAGCAGCTGATTTCTGATTCAATAACATTGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR GCA 90 bp | CATCCTGCACCAATAAGTAACTCTTCAACTATACTCCCATTAGTGACCACAATAGTGGAAAATGCTTTATaGCTTCCTTGCCTTGATGGA | + |
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Preference number: 4 (lower is better) Translates to: HPAPISNSSTILPLVTTIVENAL*LPCLDG Trigger: TCCATCAAGGCAAGGAAGGCATAAAGCATTTTCCAC...TATTGTGGTCACTAATGGGAGTATAGTTGAAGAGTTACTTATTGGTGCAGGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR CCA 90 bp | CCACTCATGGAAATCCAGATAGGGTGGGGAAAAATAACTGAATTCAATCCAAAATTCACAGAAGAAGTGTaGGATTTCAACCTCTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: PLMEIQIGWGKITEFNPKFTEEV*DFNLCA Trigger: TGCACAGAGGTTGAAATCCCACACTTCTTCTGTGAA...TTTTGGATTGAATTCAGTTATTTTTCCCCACCCTATCTGGATTTCCATGAGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR CAA 72 bp | TCTGTCATGGATAACATATCTGGCATGAGTAAATGTTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCATA | + |
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Preference number: 4 (lower is better) Translates to: SVMDNISGMSKC*CVCVCVCVCCI Trigger: TATGCAACACACACACACACACACACACACACACAAACATTTACTCATGCCAGATATGTTATCCATGACAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR TCA 90 bp | AAAAGAAATATTTATGCTGAGTCCCTTGAAATCCAGCCACTATGGCATAATTCTAGCAGGCAAGCTTTATaGTCTGAGCAAGTTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: KRNIYAESLEIQPLWHNSSRQAL*SEQVHR Trigger: TCTGTGAACTTGCTCAGATCATAAAGCTTGCCTGCT...AGAATTATGCCATAGTGGCTGGATTTCAAGGGACTCAGCATAAATATTTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR GCA 90 bp | CTCTTCAACTATACTCCCATTAGTGACCACAATACAAACTTATTGATCCACCAAGGATTTCAACCTCTGTaGAGAAATTCAGATGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LFNYTPISDHNTNLLIHQGFQPL*RNSDAA Trigger: TGCTGCATCTGAATTTCTGCACAGAGGTTGAAATCC...TTGGTGGATCAATAAGTTTGTATTGTGGTCACTAATGGGAGTATAGTTGAAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| 3UTR CAA 72 bp | CTGTGCTGGAATGAACTTTTTAGTGTTGAGGCTTTTTaGAGTCATCCTGCACCAATAAGTAACTCTTCAACT | + |
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Preference number: 4 (lower is better) Translates to: LCWNELFSVEAF*SHPAPISNSST Trigger: AGTTGAAGAGTTACTTATTGGTGCAGGATGACTCAAAAAAGCCTCAACACTAAAAAGTTCATTCCAGCACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR CCA 90 bp | AAAAGAAATATTTATGCTGAGTCCCTTGAAATCCAGCCACTATGGCATAATTCTTTCACAGAAGAAGTGTaGGATTTCAACCTCTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: KRNIYAESLEIQPLWHNSFTEEV*DFNLCA Trigger: TGCACAGAGGTTGAAATCCCACACTTCTTCTGTGAA...AGAATTATGCCATAGTGGCTGGATTTCAAGGGACTCAGCATAAATATTTCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR GCA 90 bp | CTCTTCAACTATACTCCCATTAGTGACCACAATACAAACTTATTGATCCACCAAGCTTTATGCCTTCCTTaGCTTGATGGAATTTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: LFNYTPISDHNTNLLIHQALCLP*LDGIFK Trigger: TTTGAAAATTCCATCAAGGCAAGGAAGGCATAAAGC...TTGGTGGATCAATAAGTTTGTATTGTGGTCACTAATGGGAGTATAGTTGAAGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR CAA 90 bp | TTCCCAAGACCAAGGGCATCTCCTCCCATTGATGGCCAACTAGGCAATCCTCTGTCTGTGATCCGGTGTTaGGATGTTCAAGAGCATCTT | + |
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Preference number: 5 (lower is better) Translates to: FPRPRASPPIDGQLGNPLSVIRC*DVQEHL Trigger: AAGATGCTCTTGAACATCCAAACACCGGATCACAGA...CAGAGGATTGCCTAGTTGGCCATCAATGGGAGGAGATGCCCTTGGTCTTGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR CAA 90 bp | TCCTCCTATAGGGTTGCACATCCCTTTAGCTCCTTGGGTTCTTTCTCTAGCTCAAGAGCAGAAATTCTATaGCATCTGTTTGATTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: SSYRVAHPFSSLGSFSSSRAEIL*HLFDWW Trigger: CCACCAATCAAACAGATGCAATAGAATTTCTGCTCT...TGAGCTAGAGAAAGAACCCAAGGAGCTAAAGGGATGTGCAACCCTATAGGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR CAA 90 bp | CTCTTCAACTATACTCCCATTAGTGACCACAATACAAACTTATTGATCCACCAATCTGTGATCCGGTGTTaGGATGTTCAAGAGCATCTT | + |
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Preference number: 5 (lower is better) Translates to: LFNYTPISDHNTNLLIHQSVIRC*DVQEHL Trigger: AAGATGCTCTTGAACATCCAAACACCGGATCACAGA...TTGGTGGATCAATAAGTTTGTATTGTGGTCACTAATGGGAGTATAGTTGAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTTGCATATGTGTGTTGTAACAGTCCAAGAAAAGTCTCTCATCTATGCCTTCCTTGCCTaGATGGAATTTTCAAAACAG | + |
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Preference number: 5 (lower is better) Translates to: CVCVLHMCVVTVQEKSLIYAFLA*MEFSKQ Trigger: CTGTTTTGAAAATTCCATCAAGGCAAGGAAGGCATA...GATGAGAGACTTTTCTTGGACTGTTACAACACACATATGCAACACACACACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS-3UTR CAA 90 bp | ATTCAGAAGATCTTTCCCAATGTTATTGAATCAGAAATCAGCTGCTGGGTCTGTAGAGCAGAAATTCTATaGCATCTGTTTGATTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: IQKIFPNVIESEISCWVCRAEIL*HLFDWW Trigger: CCACCAATCAAACAGATGCAATAGAATTTCTGCTCT...ACAGACCCAGCAGCTGATTTCTGATTCAATAACATTGGGAAAGATCTTCTGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS CAA 72 bp | TTCAGATGCAGCACCATGAGACTGAGCAGTAGTGCATaGACAGCACTAATAGCCAAGGAAACTACAATAAGT | + |
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Preference number: 6 (lower is better) Translates to: FRCSTMRLSSSA*TALIAKETTIS Trigger: ACTTATTGTAGTTTCCTTGGCTATTAGTGCTGTCAATGCACTACTGCTCAGTCTCATGGTGCTGCATCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071259.3 ENSMUST00000213344.2 ENSMUST00000215572.3 |
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| CDS CAA 90 bp | GTGCAGAAATTCAGATGCAGCACCATGAGACTGAGCAGTAGTGCATaGACAGCACTAATAGCCAAGGAAACTACAATAAGTATACTACAG | + |
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Preference number: 6 (lower is better) Translates to: VQKFRCSTMRLSSSA*TALIAKETTISILQ Trigger: CTGTAGTATACTTATTGTAGTTTCCTTGGCTATTAGTGCTGTCAATGCACTACTGCTCAGTCTCATGGTGCTGCATCTGAATTTCTGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071259.3 ENSMUST00000213344.2 ENSMUST00000215572.3 |
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