Pregenerated sensors for OLFR844 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049229Ensembl transcript IDs: ENSMUST00000054106.5, ENSMUST00000220268.2
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TATGTGTGTTGTGTGTGTAACTTTATGAACTTTTGTAAGCCTGACACATTTCCCTTAAGTTCTGCCACATaGCAAGTTACTTCCTTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: YVCCVCNFMNFCKPDTFPLSSAT*QVTSFS Trigger: ACTGAAGGAAGTAACTTGCCATGTGGCAGAACTTAA...GGGAAATGTGTCAGGCTTACAAAAGTTCATAAAGTTACACACACAACACACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220268.2 |
||
| CDS-3UTR TCA 90 bp | TATGTGTGTTGTGTGTGTAACTTTATGAACTTTTGTAAGCCTGACACATTTCCCGTATGGAGTTTGGGATaGAGACTGACTGCGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: YVCCVCNFMNFCKPDTFPVWSLG*RLTAQM Trigger: CATCTGCGCAGTCAGTCTTCATCCCAAACTCCATAC...GGGAAATGTGTCAGGCTTACAAAAGTTCATAAAGTTACACACACAACACACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220268.2 |
||
| CDS-3UTR CCA 90 bp | TATGTGTGTTGTGTGTGTAACTTTATGAACTTTTGTAAGCCTGACACATTTCCCAGTGTGACCCACAGGTaGAAAGGGCCTTGTAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: YVCCVCNFMNFCKPDTFPSVTHR*KGPCNY Trigger: GTAGTTACAAGGCCCTTTCCACCTGTGGGTCACACT...GGGAAATGTGTCAGGCTTACAAAAGTTCATAAAGTTACACACACAACACACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220268.2 |
||
| CDS-3UTR TCA 90 bp | TATGTGTGTTGTGTGTGTAACTTTATGAACTTTTGTAAGCCTGACACATTTCCCATAGACCCCAATCACTaGGCCATAAAACAGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: YVCCVCNFMNFCKPDTFPIDPNH*AIKQGN Trigger: GTTTCCCTGTTTTATGGCTCAGTGATTGGGGTCTAT...GGGAAATGTGTCAGGCTTACAAAAGTTCATAAAGTTACACACACAACACACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000220268.2 |
||
| CDS-3UTR GCA 90 bp | TATGTGTGTTGTGTGTGTAACTTTATGAACTTTTGTAAGCCTGACACATTTCCCGGGATGAAGACTGACTaGGCAGATGATGATGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: YVCCVCNFMNFCKPDTFPGMKTD*ADDDEI Trigger: AATCTCATCATCATCTGCGCAGTCAGTCTTCATCCC...GGGAAATGTGTCAGGCTTACAAAAGTTCATAAAGTTACACACACAACACACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220268.2 |
||
| CDS-3UTR TCA 90 bp | TATGTGTGTTGTGTGTGTAACTTTATGAACTTTTGTAAGCCTGACACATTTCCCCATCTATCGTGCTACTaGGCACTGACAACAAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: YVCCVCNFMNFCKPDTFPHLSCY*ALTTKL Trigger: TAACTTTGTTGTCAGTGCTCAGTAGCACGATAGATG...GGGAAATGTGTCAGGCTTACAAAAGTTCATAAAGTTACACACACAACACACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220268.2 |
||
| CDS-3UTR TCA 90 bp | TATGTGTGTTGTGTGTGTAACTTTATGAACTTTTGTAAGCCTGACACATTTCCCGAAGTCCACCAAATATaGAAGTTGCCAAGTATACCA | + |
|
Preference number: 4 (lower is better) Translates to: YVCCVCNFMNFCKPDTFPEVHQI*KLPSIP Trigger: TGGTATACTTGGCAACTTTCATATTTGGTGGACTTC...GGGAAATGTGTCAGGCTTACAAAAGTTCATAAAGTTACACACACAACACACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220268.2 |
||
| CDS-3UTR GCA 90 bp | TATGTGTGTTGTGTGTGTAACTTTATGAACTTTTGTAAGCCTGACACATTTCCCGCGATCATAAGCCATTaGTGCAAGAAGAAAGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YVCCVCNFMNFCKPDTFPAIISH*CKKKVF Trigger: GAAAACTTTCTTCTTGCAGCAATGGCTTATGATCGC...GGGAAATGTGTCAGGCTTACAAAAGTTCATAAAGTTACACACACAACACACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220268.2 |
||
| CDS-3UTR TCA 90 bp | TATGTGTGTTGTGTGTGTAACTTTATGAACTTTTGTAAGCCTGACACATTTCCCGACAGCTTGATTATATaGGCAAGTTCACAGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YVCCVCNFMNFCKPDTFPDSLII*ASSQKK Trigger: CTTTTTCTGTGAACTTGCTCATATAATCAAGCTGTC...GGGAAATGTGTCAGGCTTACAAAAGTTCATAAAGTTACACACACAACACACATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220268.2 |
||
| CDS-3UTR CCA 90 bp | TATGTGTGTTGTGTGTGTAACTTTATGAACTTTTGTAAGCCTGACACATTTCCCCAGAATACAGATGCTTaGATTCATAATGACCGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: YVCCVCNFMNFCKPDTFPQNTDA*IHNDRV Trigger: TACACGGTCATTATGAATCCAAGCATCTGTATTCTG...GGGAAATGTGTCAGGCTTACAAAAGTTCATAAAGTTACACACACAACACACATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220268.2 |
||
| CDS-3UTR GCA 90 bp | TATGTGTGTTGTGTGTGTAACTTTATGAACTTTTGTAAGCCTGACACATTTCCCATCATAAGCCATTGCTaGAAGAAGAAAGTTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YVCCVCNFMNFCKPDTFPIISHC*KKKVFH Trigger: ATGGAAAACTTTCTTCTTGCAGCAATGGCTTATGAT...GGGAAATGTGTCAGGCTTACAAAAGTTCATAAAGTTACACACACAACACACATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220268.2 |
||
| CDS-3UTR CCA 90 bp | TATGTGTGTTGTGTGTGTAACTTTATGAACTTTTGTAAGCCTGACACATTTCCCAATAATGCCCCAAAATaGAAGTCCACCAAATATGAA | + |
|
Preference number: 4 (lower is better) Translates to: YVCCVCNFMNFCKPDTFPNNAPK*KSTKYE Trigger: TTCATATTTGGTGGACTTCCATTTTGGGGCATTATT...GGGAAATGTGTCAGGCTTACAAAAGTTCATAAAGTTACACACACAACACACATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000220268.2 |
||
| CDS TCA 90 bp | GTCGCAAAACCAACAGGCTGTGTAGCAGGGCATCTATCGTGCTACTaGGCACTGACAACAAAGTTAGCAGAATACAGATGCTTGGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: VAKPTGCVAGHLSCY*ALTTKLAEYRCLDS Trigger: TGAATCCAAGCATCTGTATTCTGCTAACTTTGTTGTCAGTGCTCAGTAGCACGATAGATGCCCTGCTACACAGCCTGTTGGTTTTGCGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054106.5 ENSMUST00000220268.2 |
||
| CDS-3UTR CAA 90 bp | TATGTGTGTTGTGTGTGTAACTTTATGAACTTTTGTAAGCCTGACACATTTCCCCAGATGATGATGAGATaGCCTAGCACTGTGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: YVCCVCNFMNFCKPDTFPQMMMR*PSTVTR Trigger: TCTGGTCACAGTGCTAGGCAATCTCATCATCATCTG...GGGAAATGTGTCAGGCTTACAAAAGTTCATAAAGTTACACACACAACACACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220268.2 |
||
| CDS TCA 72 bp | AGTATACAATACCGAAGCTACTGCAGCCTTTCTAGATaGGTCAGTCACTGCGAAGCTGATATAGACCCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SIQYRSYCSLSR*VSHCEADIDPN Trigger: ATTGGGGTCTATATCAGCTTCGCAGTGACTGACTCATCTAGAAAGGCTGCAGTAGCTTCGGTATTGTATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054106.5 ENSMUST00000220268.2 |
||