Pregenerated sensors for OLFR843 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048391Ensembl transcript IDs: ENSMUST00000061365.3, ENSMUST00000214019.2, ENSMUST00000214267.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCAGGGTGGGTTGGTACCTAGGATTCCTTCTCCTTTTCAGAAGTaGAAGGGATGGATGGGCTATGGGCCATATGAGGGGAGATCTGAT | + |
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Preference number: 1 (lower is better) Translates to: CQGGLVPRIPSPFQK*KGWMGYGPYEGRSD Trigger: ATCAGATCTCCCCTCATATGGCCCATAGCCCATCCATCCCTTTCACTTCTGAAAAGGAGAAGGAATCCTAGGTACCAACCCACCCTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR TCA 90 bp | CCAGACACTATTGTGGATGCTGGGAAGTGCTTACTGATGGGACCCTaGTACGGCTGTCTCCTGAGATGCTCTGCCAGAGATGAACAAATA | + |
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Preference number: 1 (lower is better) Translates to: PDTIVDAGKCLLMGP*YGCLLRCSARDEQI Trigger: TATTTGTTCATCTCTGGCAGAGCATCTCAGGAGACAGCCGTATCAGGGTCCCATCAGTAAGCACTTCCCAGCATCCACAATAGTGTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR GCA 90 bp | GGACACATTCCATATACAGTCACCAAAGCCAGACACTATTGTGGATaGTGGGAAGTGCTTACTGATGGGACCCTGATACGGCTGTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: GHIPYTVTKARHYCG*WEVLTDGTLIRLSP Trigger: AGGAGACAGCCGTATCAGGGTCCCATCAGTAAGCACTTCCCAGCATCCACAATAGTGTCTGGCTTTGGTGACTGTATATGGAATGTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR CCA 90 bp | GCCAGAGATGAACAAATACAGGGGCAGATTCTTGAAGCCATCTATTaGACTGTGCACACAGTCCCTGATAGAGGAGTTGGAGAAGAGACC | + |
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Preference number: 1 (lower is better) Translates to: ARDEQIQGQILEAIY*TVHTVPDRGVGEET Trigger: GGTCTCTTCTCCAACTCCTCTATCAGGGACTGTGTGCACAGTCCAATAGATGGCTTCAAGAATCTGCCCCTGTATTTGTTCATCTCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR TCA 90 bp | ATCCTAGAGGTTGCTCCACACATAAAATGTCACAAGCATGACTGGTaGAATATGCACTCCACAGGGTCAAAACCAACAGATATGCCAAAG | + |
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Preference number: 1 (lower is better) Translates to: ILEVAPHIKCHKHDW*NMHSTGSKPTDMPK Trigger: CTTTGGCATATCTGTTGGTTTTGACCCTGTGGAGTGCATATTTCACCAGTCATGCTTGTGACATTTTATGTGTGGAGCAACCTCTAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR TCA 90 bp | TTGGAGTATCCTAGAGGTTGCTCCACACATAAAATGTCACAAGCATaGCTGGTGAAATATGCACTCCACAGGGTCAAAACCAACAGATAT | + |
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Preference number: 1 (lower is better) Translates to: LEYPRGCSTHKMSQA*LVKYALHRVKTNRY Trigger: ATATCTGTTGGTTTTGACCCTGTGGAGTGCATATTTCACCAGTCATGCTTGTGACATTTTATGTGTGGAGCAACCTCTAGGATACTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR CCA 90 bp | TACTCAGCTATTAAAAACAATGACTTCGTGAAAGTCGCAGGCAAATaGATAGAACTTGAAAATACCCTCCTGAGTGAGGTACCTCAGTCA | + |
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Preference number: 1 (lower is better) Translates to: YSAIKNNDFVKVAGK*IELENTLLSEVPQS Trigger: TGACTGAGGTACCTCACTCAGGAGGGTATTTTCAAGTTCTATCCATTTGCCTGCGACTTTCACGAAGTCATTGTTTTTAATAGCTGAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR GCA 90 bp | AACTCTCATAGAAGCAGAAGGAGAAAGGATGGGATAGGGGGTTTCTaGATGGAAGACTTGGAAAGAGGAAAACAATTGAAATGTAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: NSHRSRRRKDGIGGF*MEDLERGKQLKCKE Trigger: TTCTTTACATTTCAATTGTTTTCCTCTTTCCAAGTCTTCCATGCAGAAACCCCCTATCCCATCCTTTCTCCTTCTGCTTCTATGAGAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR CCA 90 bp | AGAACACATCAATGTCCAAGGTTGTATGGTAGTATTTTATGTACATaGTGCATTAGTGCCATGTATATCTTCACACTAATAAACAGTTCC | + |
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Preference number: 1 (lower is better) Translates to: RTHQCPRLYGSILCT*CISAMYIFTLINSS Trigger: GGAACTGTTTATTAGTGTGAAGATATACATGGCACTAATGCACCATGTACATAAAATACTACCATACAACCTTGGACATTGATGTGTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR CAA 90 bp | CTTGTTGGGCATCAGTGGGAGGAGTTACCCTTGGGTCTGAGTGTTTaGATGCCGCAGTGTAGGAGGATGCCAGAGCATAAAGAGAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: LVGHQWEELPLGLSV*MPQCRRMPEHKERR Trigger: CCTTCTCTCTTTATGCTCTGGCATCCTCCTACACTGCGGCATCAAAACACTCAGACCCAAGGGTAACTCCTCCCACTGATGCCCAACAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCACAGTGTCAACTGGTCAGACAACCCGGGATCCTGTGGACCATATGGACAGTGCATGTTAGCTTACTaGGGAGAGAGGCAATCAACA | + |
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Preference number: 2 (lower is better) Translates to: SHSVNWSDNPGSCGPYGQCMLAY*GERQST Trigger: TGTTGATTGCCTCTCTCCTCAGTAAGCTAACATGCA...CTGTCCATATGGTCCACAGGATCCCGGGTTGTCTGACCAGTTGACACTGTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCACAGTGTCAACTGGTCAGACAACCCGGGATCCTGTGGACCATATGGACAGTGTACTTTTCAGATGTaGCCTGACAATGTTCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SHSVNWSDNPGSCGPYGQCTFQM*PDNVPS Trigger: GGAGGGAACATTGTCAGGTCACATCTGAAAAGTACA...CTGTCCATATGGTCCACAGGATCCCGGGTTGTCTGACCAGTTGACACTGTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR TCA 90 bp | GTAACAGGGACATCCCCTGACTTTACTGCTGCTGTCCTGTGGATCCTGTTTTCCTGTACTTTTCAGATGTaGCCTGACAATGTTCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: VTGTSPDFTAAVLWILFSCTFQM*PDNVPS Trigger: GGAGGGAACATTGTCAGGTCACATCTGAAAAGTACA...GGAAAACAGGATCCACAGGACAGCAGCAGTAAAGTCAGGGGATGTCCCTGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCACAGTGTCAACTGGTCAGACAACCCGGGATCCTGTGGACCATATGGACAGAACAAAATTCTCAACTaGCTTTGCTCCAGAATAGCC | + |
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Preference number: 2 (lower is better) Translates to: SHSVNWSDNPGSCGPYGQNKILN*LCSRIA Trigger: GGCTATTCTGGAGCAAAGGCAGTTGAGAATTTTGTT...CTGTCCATATGGTCCACAGGATCCCGGGTTGTCTGACCAGTTGACACTGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCACAGTGTCAACTGGTCAGACAACCCGGGATCCTGTGGACCATATGGACAGTGCTTACCAAAATTTTaGATGCTAAGTCCCTATTGC | + |
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Preference number: 2 (lower is better) Translates to: SHSVNWSDNPGSCGPYGQCLPKF*MLSPYC Trigger: GCAATAGGGACTTAGCATTCAAAATTTTGGTAAGCA...CTGTCCATATGGTCCACAGGATCCCGGGTTGTCTGACCAGTTGACACTGTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR CCA 90 bp | AACAATGACTTCGTGAAAGTCGCAGGCAAATGGATAGAACTTGAAAATACCCTCAGCCACAGTGTCAACTaGTCAGACAACCCGGGATCC | + |
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Preference number: 2 (lower is better) Translates to: NNDFVKVAGKWIELENTLSHSVN*SDNPGS Trigger: GGATCCCGGGTTGTCTGACCAGTTGACACTGTGGCT...GAGGGTATTTTCAAGTTCTATCCATTTGCCTGCGACTTTCACGAAGTCATTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR TCA 90 bp | ACGATTCAATTCACAAACCATATGAAGCCCCAAAAGAAGAAAGACATAACTGTGAATGCTGCAGAGACTTaGGGTGCCAGGGTGGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: TIQFTNHMKPQKKKDITVNAAET*GARVGW Trigger: CCAACCCACCCTGGCACCTCAAGTCTCTGCAGCATT...CACAGTTATGTCTTTCTTCTTTTGGGGCTTCATATGGTTTGTGAATTGAATCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR GCA 90 bp | GTAACAGGGACATCCCCTGACTTTACTGCTGCTGTCCTGTGGATCCTGTTTTCCCATTTGTTTAAGACCTaGTCAGCAAAAAGAAAACCA | + |
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Preference number: 2 (lower is better) Translates to: VTGTSPDFTAAVLWILFSHLFKT*SAKRKP Trigger: TGGTTTTCTTTTTGCTGAGCAGGTCTTAAACAAATG...GGAAAACAGGATCCACAGGACAGCAGCAGTAAAGTCAGGGGATGTCCCTGTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR CCA 90 bp | GTAACAGGGACATCCCCTGACTTTACTGCTGCTGTCCTGTGGATCCTGTTTTCCCCAATCATCATTTTATaGGTAGAAATTTGCTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: VTGTSPDFTAAVLWILFSPIIIL*VEICSH Trigger: ATGGGAGCAAATTTCTACCCATAAAATGATGATTGG...GGAAAACAGGATCCACAGGACAGCAGCAGTAAAGTCAGGGGATGTCCCTGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR TCA 90 bp | AACAATGACTTCGTGAAAGTCGCAGGCAAATGGATAGAACTTGAAAATACCCTCTACAAGGAGGCACAATaGACACTCAGGGCAATTTGC | + |
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Preference number: 2 (lower is better) Translates to: NNDFVKVAGKWIELENTLYKEAQ*TLRAIC Trigger: GCAAATTGCCCTGAGTGTTCATTGTGCCTCCTTGTA...GAGGGTATTTTCAAGTTCTATCCATTTGCCTGCGACTTTCACGAAGTCATTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGAGAGGCAATCAACAAACATACTCTGCTATGAAGCCTGCAGAACACATCAAAAAATGTCACAAGCATaGCTGGTGAAATATGCACTC | + |
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Preference number: 2 (lower is better) Translates to: GERQSTNILCYEACRTHQKMSQA*LVKYAL Trigger: GAGTGCATATTTCACCAGTCATGCTTGTGACATTTT...TTGATGTGTTCTGCAGGCTTCATAGCAGAGTATGTTTGTTGATTGCCTCTCTCC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR GCA 90 bp | ACGATTCAATTCACAAACCATATGAAGCCCCAAAAGAAGAAAGACATAACTGTGGGCTGTCTCCTGAGATaGTCTGCCAGAGATGAACAA | + |
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Preference number: 2 (lower is better) Translates to: TIQFTNHMKPQKKKDITVGCLLR*SARDEQ Trigger: TTGTTCATCTCTGGCAGAGCATCTCAGGAGACAGCC...CACAGTTATGTCTTTCTTCTTTTGGGGCTTCATATGGTTTGTGAATTGAATCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR CCA 90 bp | ACGATTCAATTCACAAACCATATGAAGCCCCAAAAGAAGAAAGACATAACTGTGAGCAGATATGCAGTTTaGTCGTCATGTGAGTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: TIQFTNHMKPQKKKDITVSRYAV*SSCESP Trigger: GGGGGACTCACATGACGACCAAACTGCATATCTGCT...CACAGTTATGTCTTTCTTCTTTTGGGGCTTCATATGGTTTGTGAATTGAATCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR CCA 90 bp | ACGATTCAATTCACAAACCATATGAAGCCCCAAAAGAAGAAAGACATAACTGTGGGGTTTGCAGAACTATaGAGGGAGCCACAGTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: TIQFTNHMKPQKKKDITVGFAEL*REPQCQ Trigger: TTGACACTGTGGCTCCCTCCATAGTTCTGCAAACCC...CACAGTTATGTCTTTCTTCTTTTGGGGCTTCATATGGTTTGTGAATTGAATCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAGAGGCAATCAACAAACATACTCTGCTATGAAGCCTGCAGAACACATCAATAACAAAATTCTCAACTaGCTTTGCTCCAGAATAGCC | + |
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Preference number: 2 (lower is better) Translates to: ERGNQQTYSAMKPAEHINNKILN*LCSRIA Trigger: GGCTATTCTGGAGCAAAGGCAGTTGAGAATTTTGTT...ATTGATGTGTTCTGCAGGCTTCATAGCAGAGTATGTTTGTTGATTGCCTCTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR GCA 90 bp | ACGATTCAATTCACAAACCATATGAAGCCCCAAAAGAAGAAAGACATAACTGTGCGCAGTGTAGGAGGATaGCAGAGCATAAAGAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: TIQFTNHMKPQKKKDITVRSVGG*QSIKRE Trigger: TTCTCTCTTTATGCTCTGGCATCCTCCTACACTGCG...CACAGTTATGTCTTTCTTCTTTTGGGGCTTCATATGGTTTGTGAATTGAATCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR CCA 90 bp | AACAATGACTTCGTGAAAGTCGCAGGCAAATGGATAGAACTTGAAAATACCCTCGCCTATGAAGGACATTaGGGAAAGAATCTTTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: NNDFVKVAGKWIELENTLAYEGH*GKNLSV Trigger: AACAGAAAGATTCTTTCCCCAATGTCCTTCATAGGC...GAGGGTATTTTCAAGTTCTATCCATTTGCCTGCGACTTTCACGAAGTCATTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR CAA 90 bp | GCATGGGAGAAGATACAAGGAGGCACAATGAACACTCAGGGCAATTaGCATGTTCATATGAAAACCTCCTACAGTAAATTGCTTAAAATA | + |
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Preference number: 2 (lower is better) Translates to: AWEKIQGGTMNTQGN*HVHMKTSYSKLLKI Trigger: TATTTTAAGCAATTTACTGTAGGAGGTTTTCATATGAACATGCAAATTGCCCTGAGTGTTCATTGTGCCTCCTTGTATCTTCTCCCATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR TCA 90 bp | AACAATGACTTCGTGAAAGTCGCAGGCAAATGGATAGAACTTGAAAATACCCTCTTTACCATATCTGTATaGAATACCTGGAGCCTCTAT | + |
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Preference number: 2 (lower is better) Translates to: NNDFVKVAGKWIELENTLFTISV*NTWSLY Trigger: ATAGAGGCTCCAGGTATTTCATACAGATATGGTAAA...GAGGGTATTTTCAAGTTCTATCCATTTGCCTGCGACTTTCACGAAGTCATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR TCA 90 bp | ACGATTCAATTCACAAACCATATGAAGCCCCAAAAGAAGAAAGACATAACTGTGAAACATACTCTGCTATaGAGCCTGCAGAACACATCA | + |
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Preference number: 2 (lower is better) Translates to: TIQFTNHMKPQKKKDITVKHTLL*SLQNTS Trigger: TGATGTGTTCTGCAGGCTTCATAGCAGAGTATGTTT...CACAGTTATGTCTTTCTTCTTTTGGGGCTTCATATGGTTTGTGAATTGAATCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR CCA 90 bp | AATACAGGGAGTAGGAGAAATGGTCTTCACCAGGAAAGAAAATACCACTTGAATAAATTTCCATTAGTGTaGATCATAGTCTCCCTATGG | + |
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Preference number: 2 (lower is better) Translates to: NTGSRRNGLHQERKYHLNKFPLV*IIVSLW Trigger: CCATAGGGAGACTATGATCCACACTAATGGAAATTT...ATTCAAGTGGTATTTTCTTTCCTGGTGAAGACCATTTCTCCTACTCCCTGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR CCA 90 bp | AATACAGGGAGTAGGAGAAATGGTCTTCACCAGGAAAGAAAATACCACTTGAATAAGGTGGTGGTAGTATaGCTTCATAAAGATTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: NTGSRRNGLHQERKYHLNKVVVV*LHKDWF Trigger: AAACCAATCTTTATGAAGCCATACTACCACCACCTT...ATTCAAGTGGTATTTTCTTTCCTGGTGAAGACCATTTCTCCTACTCCCTGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR CCA 90 bp | ACGATTCAATTCACAAACCATATGAAGCCCCAAAAGAAGAAAGACATAACTGTGAACCATGCCTGCTACTaGAAACCTAACAAAATAGTG | + |
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Preference number: 2 (lower is better) Translates to: TIQFTNHMKPQKKKDITVNHACY*KPNKIV Trigger: CACTATTTTGTTAGGTTTCCAGTAGCAGGCATGGTT...CACAGTTATGTCTTTCTTCTTTTGGGGCTTCATATGGTTTGTGAATTGAATCGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR TCA 90 bp | ACGATTCAATTCACAAACCATATGAAGCCCCAAAAGAAGAAAGACATAACTGTGAGTGTCATGTTCTCATaGATATTGAAGGAGGTTACT | + |
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Preference number: 2 (lower is better) Translates to: TIQFTNHMKPQKKKDITVSVMFS*ILKEVT Trigger: AGTAACCTCCTTCAATATTCATGAGAACATGACACT...CACAGTTATGTCTTTCTTCTTTTGGGGCTTCATATGGTTTGTGAATTGAATCGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR GCA 90 bp | AATACAGGGAGTAGGAGAAATGGTCTTCACCAGGAAAGAAAATACCACTTGAATAGTACCACAGAGATATaGTTCAACAATTTAAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: NTGSRRNGLHQERKYHLNSTTEI*FNNLKD Trigger: GTCCTTTAAATTGTTGAAGCATATCTCTGTGGTACT...ATTCAAGTGGTATTTTCTTTCCTGGTGAAGACCATTTCTCCTACTCCCTGTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR CCA 90 bp | ACGATTCAATTCACAAACCATATGAAGCCCCAAAAGAAGAAAGACATAACTGTGAAATTTCCATTAGTGTaGATCATAGTCTCCCTATGG | + |
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Preference number: 2 (lower is better) Translates to: TIQFTNHMKPQKKKDITVKFPLV*IIVSLW Trigger: CCATAGGGAGACTATGATCCACACTAATGGAAATTT...CACAGTTATGTCTTTCTTCTTTTGGGGCTTCATATGGTTTGTGAATTGAATCGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR CCA 90 bp | ACGATTCAATTCACAAACCATATGAAGCCCCAAAAGAAGAAAGACATAACTGTGCCAATCATCATTTTATaGGTAGAAATTTGCTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: TIQFTNHMKPQKKKDITVPIIIL*VEICSH Trigger: ATGGGAGCAAATTTCTACCCATAAAATGATGATTGG...CACAGTTATGTCTTTCTTCTTTTGGGGCTTCATATGGTTTGTGAATTGAATCGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR GCA 90 bp | AATATGAAATTTCCATTAGTGTGGATCATAGTCTCCCTATGGGATAAAACCGAAAGTACCACAGAGATATaGTTCAACAATTTAAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: NMKFPLVWIIVSLWDKTESTTEI*FNNLKD Trigger: GTCCTTTAAATTGTTGAAGCATATCTCTGTGGTACT...TTCGGTTTTATCCCATAGGGAGACTATGATCCACACTAATGGAAATTTCATATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR CCA 72 bp | GGCTCAGGCCACATACATAGCAGAAGATGGCCTTGTTaGGCATCAGTGGGAGGAGTTACCCTTGGGTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: GSGHIHSRRWPC*ASVGGVTLGSE Trigger: CTCAGACCCAAGGGTAACTCCTCCCACTGATGCCCAACAAGGCCATCTTCTGCTATGTATGTGGCCTGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR CCA 72 bp | CCACAGTGTCAACTGGTCAGACAACCCGGGATCCTGTaGACCATATGGACAGAACCATGGCTCAGGCCACAT | + |
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Preference number: 3 (lower is better) Translates to: PQCQLVRQPGIL*TIWTEPWLRPH Trigger: ATGTGGCCTGAGCCATGGTTCTGTCCATATGGTCCACAGGATCCCGGGTTGTCTGACCAGTTGACACTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR CAA 90 bp | AGCCACAGTGTCAACTGGTCAGACAACCCGGGATCCTGTGGACCATATGGACAGAAGACCTCTTCTGAGTaGTTGGCCAGGGCTGTCCAA | + |
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Preference number: 3 (lower is better) Translates to: SHSVNWSDNPGSCGPYGQKTSSE*LARAVQ Trigger: TTGGACAGCCCTGGCCAACAACTCAGAAGAGGTCTT...CTGTCCATATGGTCCACAGGATCCCGGGTTGTCTGACCAGTTGACACTGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR TCA 72 bp | ATTGTGGATGCTGGGAAGTGCTTACTGATGGGACCCTaGTACGGCTGTCTCCTGAGATGCTCTGCCAGAGAT | + |
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Preference number: 3 (lower is better) Translates to: IVDAGKCLLMGP*YGCLLRCSARD Trigger: ATCTCTGGCAGAGCATCTCAGGAGACAGCCGTATCAGGGTCCCATCAGTAAGCACTTCCCAGCATCCACAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR CAA 90 bp | GTAACAGGGACATCCCCTGACTTTACTGCTGCTGTCCTGTGGATCCTGTTTTCCAAGACCTCTTCTGAGTaGTTGGCCAGGGCTGTCCAA | + |
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Preference number: 3 (lower is better) Translates to: VTGTSPDFTAAVLWILFSKTSSE*LARAVQ Trigger: TTGGACAGCCCTGGCCAACAACTCAGAAGAGGTCTT...GGAAAACAGGATCCACAGGACAGCAGCAGTAAAGTCAGGGGATGTCCCTGTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| 3UTR-3UTR CAA 90 bp | AGCCACAGTGTCAACTGGTCAGACAACCCGGGATCCTGTGGACCATATGGACAGAAACAGTTCCCTCATTaGTTTAAGACCTGCTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SHSVNWSDNPGSCGPYGQKQFPH*FKTCSA Trigger: TGCTGAGCAGGTCTTAAACAAATGAGGGAACTGTTT...CTGTCCATATGGTCCACAGGATCCCGGGTTGTCTGACCAGTTGACACTGTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCACAGTGTCAACTGGTCAGACAACCCGGGATCCTGTGGACCATATGGACAGTTCCTATGCTATTGGTaGCTCTCTCTACCCATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SHSVNWSDNPGSCGPYGQFLCYW*LSLPIF Trigger: AAAGATGGGTAGAGAGAGCAACCAATAGCATAGGAA...CTGTCCATATGGTCCACAGGATCCCGGGTTGTCTGACCAGTTGACACTGTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR TCA 72 bp | TCAGTGGGAAATGGTAGACTTAATGCTGCAGAGACTTaGGGTGCCAGGGTGGGTTGGTACCTAGGATTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SVGNGRLNAAET*GARVGWYLGFL Trigger: AAGGAATCCTAGGTACCAACCCACCCTGGCACCTCAAGTCTCTGCAGCATTAAGTCTACCATTTCCCACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCACAGTGTCAACTGGTCAGACAACCCGGGATCCTGTGGACCATATGGACAGTTCTGCATGGAAGACTaGGAAAGAGGAAAACAATTG | + |
|
Preference number: 3 (lower is better) Translates to: SHSVNWSDNPGSCGPYGQFCMED*ERGKQL Trigger: CAATTGTTTTCCTCTTTCCAAGTCTTCCATGCAGAA...CTGTCCATATGGTCCACAGGATCCCGGGTTGTCTGACCAGTTGACACTGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR GCA 72 bp | TACAGGGGCAGATTCTTGAAGCCATCTATTGGACTGTaGACACAGTCCCTGATAGAGGAGTTGGAGAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: YRGRFLKPSIGL*TQSLIEELEKR Trigger: TCTCTTCTCCAACTCCTCTATCAGGGACTGTGTGCACAGTCCAATAGATGGCTTCAAGAATCTGCCCCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAACAGGGACATCCCCTGACTTTACTGCTGCTGTCCTGTGGATCCTGTTTTCCAATTCTCAACTGCCTTaGCTCCAGAATAGCCATAAA | + |
|
Preference number: 3 (lower is better) Translates to: VTGTSPDFTAAVLWILFSNSQLP*LQNSHK Trigger: TTTATGGCTATTCTGGAGCAAAGGCAGTTGAGAATT...GGAAAACAGGATCCACAGGACAGCAGCAGTAAAGTCAGGGGATGTCCCTGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAATGACTTCGTGAAAGTCGCAGGCAAATGGATAGAACTTGAAAATACCCTCCAGAAGATGGCCTTGTaGGGCATCAGTGGGAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: NNDFVKVAGKWIELENTLQKMAL*GISGRS Trigger: ACTCCTCCCACTGATGCCCAACAAGGCCATCTTCTG...GAGGGTATTTTCAAGTTCTATCCATTTGCCTGCGACTTTCACGAAGTCATTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR CCA 72 bp | GAACAAATACAGGGGCAGATTCTTGAAGCCATCTATTaGACTGTGCACACAGTCCCTGATAGAGGAGTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: EQIQGQILEAIY*TVHTVPDRGVG Trigger: TCCAACTCCTCTATCAGGGACTGTGTGCACAGTCCAATAGATGGCTTCAAGAATCTGCCCCTGTATTTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAACAGGGACATCCCCTGACTTTACTGCTGCTGTCCTGTGGATCCTGTTTTCCTTCAGGGGCTGTGATTaGAGCTTAGATAAATTAATG | + |
|
Preference number: 3 (lower is better) Translates to: VTGTSPDFTAAVLWILFSFRGCD*SLDKLM Trigger: CATTAATTTATCTAAGCTCAAATCACAGCCCCTGAA...GGAAAACAGGATCCACAGGACAGCAGCAGTAAAGTCAGGGGATGTCCCTGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR TCA 72 bp | CCTAGAGGTTGCTCCACACATAAAATGTCACAAGCATaGCTGGTGAAATATGCACTCCACAGGGTCAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: PRGCSTHKMSQA*LVKYALHRVKT Trigger: GGTTTTGACCCTGTGGAGTGCATATTTCACCAGTCATGCTTGTGACATTTTATGTGTGGAGCAACCTCTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR TCA 72 bp | CAAAATTGTCAAACGCAGACATGGAAAGACCTCTTCTaGGTTGTTGGCCAGGGCTGTCCAAAGGAATATCCA | + |
|
Preference number: 3 (lower is better) Translates to: QNCQTQTWKDLF*VVGQGCPKEYP Trigger: TGGATATTCCTTTGGACAGCCCTGGCCAACAACTCAGAAGAGGTCTTTCCATGTCTGCGTTTGACAATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR TCA 72 bp | CTGAGGAGAGAGGCAATCAACAAACATACTCTGCTATaGAGCCTGCAGAACACATCAATGTCCAAGGTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LRREAINKHTLL*SLQNTSMSKVV Trigger: TACAACCTTGGACATTGATGTGTTCTGCAGGCTTCATAGCAGAGTATGTTTGTTGATTGCCTCTCTCCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR TCA 72 bp | CCTTTAATCTGGACCATAGCTTCTGCTGGTCGCCTATaGAGGACATTGGGGAAAGAATCTTTCTGTTTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: PLIWTIASAGRL*RTLGKESFCLY Trigger: GTACAAACAGAAAGATTCTTTCCCCAATGTCCTTCATAGGCGACCAGCAGAAGCTATGGTCCAGATTAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR CCA 72 bp | TCAAACGCAGACATGGAAAGACCTCTTCTGAGTTGTTaGCCAGGGCTGTCCAAAGGAATATCCAAATATAGA | + |
|
Preference number: 3 (lower is better) Translates to: SNADMERPLLSC*PGLSKGISKYR Trigger: TCTATATTTGGATATTCCTTTGGACAGCCCTGGCCAACAACTCAGAAGAGGTCTTTCCATGTCTGCGTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAGAGGCAATCAACAAACATACTCTGCTATGAAGCCTGCAGAACACATCAAAAACAGTTCCCTCATTaGTTTAAGACCTGCTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GERQSTNILCYEACRTHQKQFPH*FKTCSA Trigger: TGCTGAGCAGGTCTTAAACAAATGAGGGAACTGTTT...TTGATGTGTTCTGCAGGCTTCATAGCAGAGTATGTTTGTTGATTGCCTCTCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR TCA 72 bp | GTTGCTCCACACATAAAATGTCACAAGCATGACTGGTaGAATATGCACTCCACAGGGTCAAAACCAACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: VAPHIKCHKHDW*NMHSTGSKPTD Trigger: ATCTGTTGGTTTTGACCCTGTGGAGTGCATATTTCACCAGTCATGCTTGTGACATTTTATGTGTGGAGCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR TCA 72 bp | TCTCTCATTGAACCCAAAGGCTGCATGTTAGCTTACTaGGGAGAGAGGCAATCAACAAACATACTCTGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: SLIEPKGCMLAY*GERQSTNILCY Trigger: ATAGCAGAGTATGTTTGTTGATTGCCTCTCTCCTCAGTAAGCTAACATGCAGCCTTTGGGTTCAATGAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGATTCAATTCACAAACCATATGAAGCCCCAAAAGAAGAAAGACATAACTGTGTGGGAGGAGTTACCCTaGGGTCTGAGTGTTTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: TIQFTNHMKPQKKKDITVWEELP*GLSVLM Trigger: CATCAAAACACTCAGACCCAAGGGTAACTCCTCCCA...CACAGTTATGTCTTTCTTCTTTTGGGGCTTCATATGGTTTGTGAATTGAATCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR GCA 72 bp | GAAATATGCACTCCACAGGGTCAAAACCAACAGATATaGCAAAGTGAATATGGAAAAACCTACATGGCATCG | + |
|
Preference number: 3 (lower is better) Translates to: EICTPQGQNQQI*QSEYGKTYMAS Trigger: CGATGCCATGTAGGTTTTTCCATATTCACTTTGGCATATCTGTTGGTTTTGACCCTGTGGAGTGCATATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAATGACTTCGTGAAAGTCGCAGGCAAATGGATAGAACTTGAAAATACCCTCAATTCTCAACTGCCTTaGCTCCAGAATAGCCATAAA | + |
|
Preference number: 3 (lower is better) Translates to: NNDFVKVAGKWIELENTLNSQLP*LQNSHK Trigger: TTTATGGCTATTCTGGAGCAAAGGCAGTTGAGAATT...GAGGGTATTTTCAAGTTCTATCCATTTGCCTGCGACTTTCACGAAGTCATTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAATGACTTCGTGAAAGTCGCAGGCAAATGGATAGAACTTGAAAATACCCTCAATGCTAAGTCCCTATaGCTAAAGAAGCCATGTATT | + |
|
Preference number: 3 (lower is better) Translates to: NNDFVKVAGKWIELENTLNAKSL*LKKPCI Trigger: AATACATGGCTTCTTTAGCAATAGGGACTTAGCATT...GAGGGTATTTTCAAGTTCTATCCATTTGCCTGCGACTTTCACGAAGTCATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR CCA 72 bp | ATGTATTTTGGAAATGGGGCTCAGATATGTTTGAGCTaGAAGCGACATAAATGTCTAAGGACTATCTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: MYFGNGAQICLS*KRHKCLRTISH Trigger: ATGAGAGATAGTCCTTAGACATTTATGTCGCTTCCAGCTCAAACATATCTGAGCCCCATTTCCAAAATACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGATTCAATTCACAAACCATATGAAGCCCCAAAAGAAGAAAGACATAACTGTGTTCTGCATGGAAGACTaGGAAAGAGGAAAACAATTG | + |
|
Preference number: 3 (lower is better) Translates to: TIQFTNHMKPQKKKDITVFCMED*ERGKQL Trigger: CAATTGTTTTCCTCTTTCCAAGTCTTCCATGCAGAA...CACAGTTATGTCTTTCTTCTTTTGGGGCTTCATATGGTTTGTGAATTGAATCGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGATTCAATTCACAAACCATATGAAGCCCCAAAAGAAGAAAGACATAACTGTGCACCAGTTATTGCAGTaGTTTTTGACACATTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TIQFTNHMKPQKKKDITVHQLLQ*FLTHSE Trigger: TTCTGAATGTGTCAAAAACAACTGCAATAACTGGTG...CACAGTTATGTCTTTCTTCTTTTGGGGCTTCATATGGTTTGTGAATTGAATCGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR TCA 72 bp | TATGTAAACAAAAATATCTGCAGCAAGACAAGAGTATaGAGAAGGGTATTCTCAGGGAAAACAAACAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: YVNKNICSKTRV*RRVFSGKTNRA Trigger: TGCTCTGTTTGTTTTCCCTGAGAATACCCTTCTTCATACTCTTGTCTTGCTGCAGATATTTTTGTTTACATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR CCA 72 bp | CAATGTCCAAGGTTGTATGGTAGTATTTTATGTACATaGTGCATTAGTGCCATGTATATCTTCACACTAATA | + |
|
Preference number: 3 (lower is better) Translates to: QCPRLYGSILCT*CISAMYIFTLI Trigger: TATTAGTGTGAAGATATACATGGCACTAATGCACCATGTACATAAAATACTACCATACAACCTTGGACATTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| CDS-3UTR TCA 90 bp | AGCCACAGTGTCAACTGGTCAGACAACCCGGGATCCTGTGGACCATATGGACAGGATACAACTGAGAGATaGGATCCGCAAGTGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SHSVNWSDNPGSCGPYGQDTTER*DPQVEK Trigger: CTTTTCCACTTGCGGATCTCATCTCTCAGTTGTATC...CTGTCCATATGGTCCACAGGATCCCGGGTTGTCTGACCAGTTGACACTGTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| CDS-3UTR CCA 90 bp | AGCCACAGTGTCAACTGGTCAGACAACCCGGGATCCTGTGGACCATATGGACAGTCAGAGGATGAACTATaGCCAAGTAACGGTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHSVNWSDNPGSCGPYGQSEDEL*PSNGHR Trigger: CCTATGACCGTTACTTGGCCATAGTTCATCCTCTGA...CTGTCCATATGGTCCACAGGATCCCGGGTTGTCTGACCAGTTGACACTGTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR CAA 72 bp | GCTCTGCCAGAGATGAACAAATACAGGGGCAGATTCTaGAAGCCATCTATTGGACTGTGCACACAGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALPEMNKYRGRF*KPSIGLCTQSL Trigger: CAGGGACTGTGTGCACAGTCCAATAGATGGCTTCAAGAATCTGCCCCTGTATTTGTTCATCTCTGGCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| CDS-3UTR TCA 90 bp | AGCCACAGTGTCAACTGGTCAGACAACCCGGGATCCTGTGGACCATATGGACAGAGTTCACAGAAGAAATaGAGGATATTCTGGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SHSVNWSDNPGSCGPYGQSSQKK*RIFWSL Trigger: CAAAGACCAGAATATCCTTCATTTCTTCTGTGAACT...CTGTCCATATGGTCCACAGGATCCCGGGTTGTCTGACCAGTTGACACTGTGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| CDS-3UTR GCA 90 bp | GTAACAGGGACATCCCCTGACTTTACTGCTGCTGTCCTGTGGATCCTGTTTTCCAGGTGTCTCATGGCTTaGTTCATTTCTCTGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTGTSPDFTAAVLWILFSRCLMA*FISLFL Trigger: GAGAAACAGAGAAATGAAGCAAGCCATGAGACACCT...GGAAAACAGGATCCACAGGACAGCAGCAGTAAAGTCAGGGGATGTCCCTGTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| CDS-3UTR TCA 90 bp | GTAACAGGGACATCCCCTGACTTTACTGCTGCTGTCCTGTGGATCCTGTTTTCCGCATGTTTGATGACTTaGACAAGTTCACAGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VTGTSPDFTAAVLWILFSACLMT*TSSQKK Trigger: TTTCTTCTGTGAACTTGTTCAAGTCATCAAACATGC...GGAAAACAGGATCCACAGGACAGCAGCAGTAAAGTCAGGGGATGTCCCTGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| CDS-3UTR GCA 90 bp | GTAACAGGGACATCCCCTGACTTTACTGCTGCTGTCCTGTGGATCCTGTTTTCCAGAAGAATCAGAAACTaGAGAACTCATATACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTGTSPDFTAAVLWILFSRRIRN*RTHIHS Trigger: GGAGTGTATATGAGTTCTGCAGTTTCTGATTCTTCT...GGAAAACAGGATCCACAGGACAGCAGCAGTAAAGTCAGGGGATGTCCCTGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| CDS-3UTR GCA 90 bp | GGAGAGAGGCAATCAACAAACATACTCTGCTATGAAGCCTGCAGAACACATCAAAGGTGTCTCATGGCTTaGTTCATTTCTCTGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GERQSTNILCYEACRTHQRCLMA*FISLFL Trigger: GAGAAACAGAGAAATGAAGCAAGCCATGAGACACCT...TTGATGTGTTCTGCAGGCTTCATAGCAGAGTATGTTTGTTGATTGCCTCTCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| CDS-3UTR CCA 90 bp | AACAATGACTTCGTGAAAGTCGCAGGCAAATGGATAGAACTTGAAAATACCCTCGATGAGATCCGCAAGTaGAAAAGGCTTTATTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: NNDFVKVAGKWIELENTLDEIRK*KRLYSV Trigger: GACGGAATAAAGCCTTTTCCACTTGCGGATCTCATC...GAGGGTATTTTCAAGTTCTATCCATTTGCCTGCGACTTTCACGAAGTCATTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGGCAATCAACAAACATACTCTGCTATGAAGCCTGCAGAACACATCAATAGAGAAGGTGTCTCATaGCTTGCTTCATTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ERGNQQTYSAMKPAEHINREGVS*LASFLC Trigger: ACAGAGAAATGAAGCAAGCCATGAGACACCTTCTCT...ATTGATGTGTTCTGCAGGCTTCATAGCAGAGTATGTTTGTTGATTGCCTCTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR CAA 72 bp | GAAGCCATGTATTTTGGAAATGGGGCTCAGATATGTTaGAGCTGGAAGCGACATAAATGTCTAAGGACTATC | + |
|
Preference number: 4 (lower is better) Translates to: EAMYFGNGAQIC*SWKRHKCLRTI Trigger: GATAGTCCTTAGACATTTATGTCGCTTCCAGCTCAAACATATCTGAGCCCCATTTCCAAAATACATGGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAGAGGCAATCAACAAACATACTCTGCTATGAAGCCTGCAGAACACATCAAAGTTCACAGAAGAAATaGAGGATATTCTGGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GERQSTNILCYEACRTHQSSQKK*RIFWSL Trigger: CAAAGACCAGAATATCCTTCATTTCTTCTGTGAACT...TTGATGTGTTCTGCAGGCTTCATAGCAGAGTATGTTTGTTGATTGCCTCTCTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| CDS-3UTR CCA 90 bp | AATACAGGGAGTAGGAGAAATGGTCTTCACCAGGAAAGAAAATACCACTTGAATGATGAGATCCGCAAGTaGAAAAGGCTTTATTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: NTGSRRNGLHQERKYHLNDEIRK*KRLYSV Trigger: GACGGAATAAAGCCTTTTCCACTTGCGGATCTCATC...ATTCAAGTGGTATTTTCTTTCCTGGTGAAGACCATTTCTCCTACTCCCTGTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR CAA 72 bp | AGAAGCATTGTGGAAGTCATGGCAGAAATAATTGCATaGGAGTATCCTAGAGGTTGCTCCACACATAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: RSIVEVMAEIIA*EYPRGCSTHKM Trigger: CATTTTATGTGTGGAGCAACCTCTAGGATACTCCAATGCAATTATTTCTGCCATGACTTCCACAATGCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| CDS-3UTR CCA 90 bp | ACACATGAATTGATGTGGAAATTTAAAGAAGTCCTAATCCCTGGAACTTTGCATTCAGAGGATGAACTATaGCCAAGTAACGGTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: THELMWKFKEVLIPGTLHSEDEL*PSNGHR Trigger: CCTATGACCGTTACTTGGCCATAGTTCATCCTCTGA...ATGCAAAGTTCCAGGGATTAGGACTTCTTTAAATTTCCACATCAATTCATGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR CAA 72 bp | AAGATACAAGGAGGCACAATGAACACTCAGGGCAATTaGCATGTTCATATGAAAACCTCCTACAGTAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: KIQGGTMNTQGN*HVHMKTSYSKL Trigger: CAATTTACTGTAGGAGGTTTTCATATGAACATGCAAATTGCCCTGAGTGTTCATTGTGCCTCCTTGTATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| CDS-3UTR GCA 90 bp | AATACAGGGAGTAGGAGAAATGGTCTTCACCAGGAAAGAAAATACCACTTGAATAGAAGAATCAGAAACTaGAGAACTCATATACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: NTGSRRNGLHQERKYHLNRRIRN*RTHIHS Trigger: GGAGTGTATATGAGTTCTGCAGTTTCTGATTCTTCT...ATTCAAGTGGTATTTTCTTTCCTGGTGAAGACCATTTCTCCTACTCCCTGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| CDS-3UTR TCA 90 bp | ACACATGAATTGATGTGGAAATTTAAAGAAGTCCTAATCCCTGGAACTTTGCATGCATGTTTGATGACTTaGACAAGTTCACAGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: THELMWKFKEVLIPGTLHACLMT*TSSQKK Trigger: TTTCTTCTGTGAACTTGTTCAAGTCATCAAACATGC...ATGCAAAGTTCCAGGGATTAGGACTTCTTTAAATTTCCACATCAATTCATGTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| 3UTR CAA 72 bp | CATGTATATCTTCACACTAATAAACAGTTCCCTCATTaGTTTAAGACCTGCTCAGCAAAAAGAAAACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: HVYLHTNKQFPH*FKTCSAKRKPC Trigger: GCATGGTTTTCTTTTTGCTGAGCAGGTCTTAAACAAATGAGGGAACTGTTTATTAGTGTGAAGATATACATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
||
| CDS-3UTR GCA 90 bp | ACACATGAATTGATGTGGAAATTTAAAGAAGTCCTAATCCCTGGAACTTTGCATAACAACATCAGACTATaGAGTAGTGCATTAATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: THELMWKFKEVLIPGTLHNNIRL*SSALMV Trigger: TACCATTAATGCACTACTGCATAGTCTGATGTTGTT...ATGCAAAGTTCCAGGGATTAGGACTTCTTTAAATTTCCACATCAATTCATGTGT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| CDS-3UTR CAA 90 bp | GGAGAGAGGCAATCAACAAACATACTCTGCTATGAAGCCTGCAGAACACATCAAAAGGTGTCTCATGGCTaGCTTCATTTCTCTGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: GERQSTNILCYEACRTHQKVSHG*LHFSVS Trigger: AGAAACAGAGAAATGAAGCAAGCCATGAGACACCTT...TTGATGTGTTCTGCAGGCTTCATAGCAGAGTATGTTTGTTGATTGCCTCTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| CDS-3UTR CAA 90 bp | GAGAGAGGCAATCAACAAACATACTCTGCTATGAAGCCTGCAGAACACATCAATAAGGTGTCTCATGGCTaGCTTCATTTCTCTGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: ERGNQQTYSAMKPAEHINKVSHG*LHFSVS Trigger: AGAAACAGAGAAATGAAGCAAGCCATGAGACACCTT...ATTGATGTGTTCTGCAGGCTTCATAGCAGAGTATGTTTGTTGATTGCCTCTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| CDS-3UTR CAA 90 bp | GAGAGAGGCAATCAACAAACATACTCTGCTATGAAGCCTGCAGAACACATCAATGGCATGTTTGATGACTaGAACAAGTTCACAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: ERGNQQTYSAMKPAEHINGMFDD*NKFTEE Trigger: TTCTTCTGTGAACTTGTTCAAGTCATCAAACATGCC...ATTGATGTGTTCTGCAGGCTTCATAGCAGAGTATGTTTGTTGATTGCCTCTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214019.2 ENSMUST00000214267.2 |
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| CDS TCA 72 bp | AACAAAATATATAGACAGGAACAAGCTGAAGATAAATaGTTCAATGGCTGGAGAATATGTCAGTCCAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: NKIYRQEQAEDK*FNGWRICQSSE Trigger: CTCACTGGACTGACATATTCTCCAGCCATTGAATCATTTATCTTCAGCTTGTTCCTGTCTATATATTTTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061365.3 ENSMUST00000214019.2 ENSMUST00000214267.2 |
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