Pregenerated sensors for OLFR836 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059303Ensembl transcript IDs: ENSMUST00000074986.7, ENSMUST00000212730.3, ENSMUST00000215981.2
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTCTACTTCTTTCCTTAAGAGGAGACCTAACTCTAAGACAGGGATaGGTGTTTCCCATGTCCAAGAAAAACAGTGTATACAGACACACA | + |
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Preference number: 1 (lower is better) Translates to: CLLLSLRGDLTLRQG*VFPMSKKNSVYRHT Trigger: TGTGTGTCTGTATACACTGTTTTTCTTGGACATGGGAAACACCCATCCCTGTCTTAGAGTTAGGTCTCCTCTTAAGGAAAGAAGTAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR GCA 90 bp | TCAGTTCTTAAGAGTATTTGCTGCTTTTCCATAGGTTATCTTCCTTaGACTATGGTTGAGCAGCTTACAACTACCAGAGGTTCTACTCAA | + |
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Preference number: 1 (lower is better) Translates to: SVLKSICCFSIGYLP*TMVEQLTTTRGSTQ Trigger: TTGAGTAGAACCTCTGGTAGTTGTAAGCTGCTCAACCATAGTGCAAGGAAGATAACCTATGGAAAAGCAGCAAATACTCTTAAGAACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR GCA 90 bp | AAGTTCATCCTAGTGTTGCCAAATGTAATCAAGTTGACAATAAAGTaGTTACCTGAGTTGATAGAACGATTACACCCTGTACAAGTAGAC | + |
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Preference number: 1 (lower is better) Translates to: KFILVLPNVIKLTIK*LPELIERLHPVQVD Trigger: GTCTACTTGTACAGGGTGTAATCGTTCTATCAACTCAGGTAAGCACTTTATTGTCAACTTGATTACATTTGGCAACACTAGGATGAACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR TCA 90 bp | AAGTTCTATTGGAGAGTCAATTTTCTCCAAGGATGTAACTTCTTTTaGGTTGCCTATGTTTCCAGAAATAGGCTGATGGATATTCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: KFYWRVNFLQGCNFF*VAYVSRNRLMDILQ Trigger: TTGAAGAATATCCATCAGCCTATTTCTGGAAACATAGGCAACTCAAAAGAAGTTACATCCTTGGAGAAAATTGACTCTCCAATAGAACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR TCA 90 bp | CATCCACGGGTAATATTAAAACTTCTCATAATGACCCCTTCCCTGGGATTGAAAATCCCAACCCCCTACTaGTTGGCAGCTACCAATCAT | + |
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Preference number: 2 (lower is better) Translates to: HPRVILKLLIMTPSLGLKIPTPY*LAATNH Trigger: ATGATTGGTAGCTGCCAATCAGTAGGGGGTTGGGAT...TTTCAATCCCAGGGAAGGGGTCATTATGAGAAGTTTTAATATTACCCGTGGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR GCA 90 bp | GCAACTCCAGAGGATCCAGTACACTGTAATAACTTCTGTAGCTATATCATCAGATTCCGTTTAAACCAGTaGCTGCTCCAAAGGAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: ATPEDPVHCNNFCSYIIRFRLNQ*LLQRRA Trigger: GGCTCTCCTTTGGAGCAGGCACTGGTTTAAACGGAA...TCTGATGATATAGCTACAGAAGTTATTACAGTGTACTGGATCCTCTGGAGTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGAAGAAGGAGATTATTTGGGGTTCATTTGTTTATGTATGGCAATAGAGGTCATCCCAACCCCCTACTaGTTGGCAGCTACCAATCAT | + |
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Preference number: 2 (lower is better) Translates to: LEEGDYLGFICLCMAIEVIPTPY*LAATNH Trigger: ATGATTGGTAGCTGCCAATCAGTAGGGGGTTGGGAT...GACCTCTATTGCCATACATAAACAAATGAACCCCAAATAATCTCCTTCTTCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR GCA 90 bp | GAACTATATCAGATTAGTAGGGTGACTTTCCTGGTCTTCTACACATTATTTAGCTTCCGTTTAAACCAGTaGCTGCTCCAAAGGAGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: ELYQISRVTFLVFYTLFSFRLNQ*LLQRRA Trigger: GGCTCTCCTTTGGAGCAGGCACTGGTTTAAACGGAA...GCTAAATAATGTGTAGAAGACCAGGAAAGTCACCCTACTAATCTGATATAGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR CAA 90 bp | GGGCATATCCACAAGTTCATCCTAGTGTTGCCAAATGTAATCAAGTaGACAATAAAGTGCTTACCTGAGTTGATAGAACGATTACACCCT | + |
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Preference number: 2 (lower is better) Translates to: GHIHKFILVLPNVIK*TIKCLPELIERLHP Trigger: AGGGTGTAATCGTTCTATCAACTCAGGTAAGCACTTTATTGTCAACTTGATTACATTTGGCAACACTAGGATGAACTTGTGGATATGCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR TCA 90 bp | GCAACTCCAGAGGATCCAGTACACTGTAATAACTTCTGTAGCTATATCATCAGAGGATGTAACTTCTTTTaGGTTGCCTATGTTTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: ATPEDPVHCNNFCSYIIRGCNFF*VAYVSR Trigger: TCTGGAAACATAGGCAACTCAAAAGAAGTTACATCC...TCTGATGATATAGCTACAGAAGTTATTACAGTGTACTGGATCCTCTGGAGTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR GCA 90 bp | CATCCACGGGTAATATTAAAACTTCTCATAATGACCCCTTCCCTGGGATTGAAAATAGGTTATCTTCCTTaGACTATGGTTGAGCAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: HPRVILKLLIMTPSLGLKIGYLP*TMVEQL Trigger: AAGCTGCTCAACCATAGTGCAAGGAAGATAACCTAT...TTTCAATCCCAGGGAAGGGGTCATTATGAGAAGTTTTAATATTACCCGTGGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR TCA 90 bp | GCAACTCCAGAGGATCCAGTACACTGTAATAACTTCTGTAGCTATATCATCAGATTGACTGTGCTTCTCTaGATCTACCATTATCACTAT | + |
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Preference number: 2 (lower is better) Translates to: ATPEDPVHCNNFCSYIIRLTVLL*IYHYHY Trigger: ATAGTGATAATGGTAGATTCAGAGAAGCACAGTCAA...TCTGATGATATAGCTACAGAAGTTATTACAGTGTACTGGATCCTCTGGAGTTGC 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGAAGAAGGAGATTATTTGGGGTTCATTTGTTTATGTATGGCAATAGAGGTCACTATATGTATCAGTTaGATTTTCTCCCTCACCTGG | + |
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Preference number: 2 (lower is better) Translates to: LEEGDYLGFICLCMAIEVTICIS*IFSLTW Trigger: CCAGGTGAGGGAGAAAATGCAACTGATACATATAGT...GACCTCTATTGCCATACATAAACAAATGAACCCCAAATAATCTCCTTCTTCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR CCA 90 bp | GAACTATATCAGATTAGTAGGGTGACTTTCCTGGTCTTCTACACATTATTTAGCACTCTTTCTGAGGGTTaGAGTTCAGTTCTAAACAAC | + |
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Preference number: 2 (lower is better) Translates to: ELYQISRVTFLVFYTLFSTLSEG*SSVLNN Trigger: GTTGTTTAGAACTGAACTCCAACCCTCAGAAAGAGT...GCTAAATAATGTGTAGAAGACCAGGAAAGTCACCCTACTAATCTGATATAGTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR CAA 90 bp | TATCTAGAGAAAATAATTGGAAGAAGGAGATTATTTGGGGTTCATTaGTTTATGTATGGCAATAGAGGTCTCCCACATCTGCACGTAAGT | + |
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Preference number: 2 (lower is better) Translates to: YLEKIIGRRRLFGVH*FMYGNRGLPHLHVS Trigger: ACTTACGTGCAGATGTGGGAGACCTCTATTGCCATACATAAACAAATGAACCCCAAATAATCTCCTTCTTCCAATTATTTTCTCTAGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR TCA 90 bp | GAACTATATCAGATTAGTAGGGTGACTTTCCTGGTCTTCTACACATTATTTAGCATTGATAGAAAAACTTaGCCATTTGTAGTCCTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: ELYQISRVTFLVFYTLFSIDRKT*PFVVLE Trigger: CTCCAGGACTACAAATGGTCAAGTTTTTCTATCAAT...GCTAAATAATGTGTAGAAGACCAGGAAAGTCACCCTACTAATCTGATATAGTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR GCA 90 bp | AAAAGACAAATGTTAGTTGGAACAGGTTTTGACTTTCTTCCAGGCACCATATTTATAGGTTATCTTCCTTaGACTATGGTTGAGCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: KRQMLVGTGFDFLPGTIFIGYLP*TMVEQL Trigger: AAGCTGCTCAACCATAGTGCAAGGAAGATAACCTAT...AAATATGGTGCCTGGAAGAAAGTCAAAACCTGTTCCAACTAACATTTGTCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGAAGAAGGAGATTATTTGGGGTTCATTTGTTTATGTATGGCAATAGAGGTCAAAGCAAAACTACAGTaGGATAGAGAAAATGTTCCG | + |
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Preference number: 2 (lower is better) Translates to: LEEGDYLGFICLCMAIEVKAKLQ*DRENVP Trigger: CGGAACATTTTCTCTATCCCACTGTAGTTTTGCTTT...GACCTCTATTGCCATACATAAACAAATGAACCCCAAATAATCTCCTTCTTCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAGACAAATGTTAGTTGGAACAGGTTTTGACTTTCTTCCAGGCACCATATTTTTGACTGTGCTTCTCTaGATCTACCATTATCACTAT | + |
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Preference number: 2 (lower is better) Translates to: KRQMLVGTGFDFLPGTIFLTVLL*IYHYHY Trigger: ATAGTGATAATGGTAGATTCAGAGAAGCACAGTCAA...AAATATGGTGCCTGGAAGAAAGTCAAAACCTGTTCCAACTAACATTTGTCTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAGACAAATGTTAGTTGGAACAGGTTTTGACTTTCTTCCAGGCACCATATTTAAAGCAAAACTACAGTaGGATAGAGAAAATGTTCCG | + |
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Preference number: 2 (lower is better) Translates to: KRQMLVGTGFDFLPGTIFKAKLQ*DRENVP Trigger: CGGAACATTTTCTCTATCCCACTGTAGTTTTGCTTT...AAATATGGTGCCTGGAAGAAAGTCAAAACCTGTTCCAACTAACATTTGTCTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR CCA 72 bp | CTTTCCTTAAGAGGAGACCTAACTCTAAGACAGGGATaGGTGTTTCCCATGTCCAAGAAAAACAGTGTATAC | + |
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Preference number: 3 (lower is better) Translates to: LSLRGDLTLRQG*VFPMSKKNSVY Trigger: GTATACACTGTTTTTCTTGGACATGGGAAACACCCATCCCTGTCTTAGAGTTAGGTCTCCTCTTAAGGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR CAA 90 bp | GCAACTCCAGAGGATCCAGTACACTGTAATAACTTCTGTAGCTATATCATCAGATTCCTTGCACTATGGTaGAGCAGCTTACAACTACCA | + |
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Preference number: 3 (lower is better) Translates to: ATPEDPVHCNNFCSYIIRFLALW*SSLQLP Trigger: TGGTAGTTGTAAGCTGCTCAACCATAGTGCAAGGAA...TCTGATGATATAGCTACAGAAGTTATTACAGTGTACTGGATCCTCTGGAGTTGC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR CAA 90 bp | GCAACTCCAGAGGATCCAGTACACTGTAATAACTTCTGTAGCTATATCATCAGAACAGGATTTTTCCCCTaGGCTACCAGAGAATCTAAG | + |
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Preference number: 3 (lower is better) Translates to: ATPEDPVHCNNFCSYIIRTGFFP*ATRESK Trigger: CTTAGATTCTCTGGTAGCCAAGGGGAAAAATCCTGT...TCTGATGATATAGCTACAGAAGTTATTACAGTGTACTGGATCCTCTGGAGTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR CAA 90 bp | GCAACTCCAGAGGATCCAGTACACTGTAATAACTTCTGTAGCTATATCATCAGATCCTTGACTCAGCAGTaGTTGAAAAATATGTGGCAT | + |
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Preference number: 3 (lower is better) Translates to: ATPEDPVHCNNFCSYIIRSLTQQ*LKNMWH Trigger: ATGCCACATATTTTTCAACAACTGCTGAGTCAAGGA...TCTGATGATATAGCTACAGAAGTTATTACAGTGTACTGGATCCTCTGGAGTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR CAA 90 bp | GAACTATATCAGATTAGTAGGGTGACTTTCCTGGTCTTCTACACATTATTTAGCTTCCTTGCACTATGGTaGAGCAGCTTACAACTACCA | + |
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Preference number: 3 (lower is better) Translates to: ELYQISRVTFLVFYTLFSFLALW*SSLQLP Trigger: TGGTAGTTGTAAGCTGCTCAACCATAGTGCAAGGAA...GCTAAATAATGTGTAGAAGACCAGGAAAGTCACCCTACTAATCTGATATAGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR CAA 90 bp | GCAACTCCAGAGGATCCAGTACACTGTAATAACTTCTGTAGCTATATCATCAGATTGACTCAGCAGTTGTaGAAAAATATGTGGCATACA | + |
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Preference number: 3 (lower is better) Translates to: ATPEDPVHCNNFCSYIIRLTQQL*KNMWHT Trigger: TGTATGCCACATATTTTTCAACAACTGCTGAGTCAA...TCTGATGATATAGCTACAGAAGTTATTACAGTGTACTGGATCCTCTGGAGTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR CAA 90 bp | GAACTATATCAGATTAGTAGGGTGACTTTCCTGGTCTTCTACACATTATTTAGCCACTATATGTATCAGTaGCATTTTCTCCCTCACCTG | + |
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Preference number: 3 (lower is better) Translates to: ELYQISRVTFLVFYTLFSHYMYQ*HFLPHL Trigger: CAGGTGAGGGAGAAAATGCAACTGATACATATAGTG...GCTAAATAATGTGTAGAAGACCAGGAAAGTCACCCTACTAATCTGATATAGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGAAGAAGGAGATTATTTGGGGTTCATTTGTTTATGTATGGCAATAGAGGTCCACTATATGTATCAGTaGCATTTTCTCCCTCACCTG | + |
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Preference number: 3 (lower is better) Translates to: LEEGDYLGFICLCMAIEVHYMYQ*HFLPHL Trigger: CAGGTGAGGGAGAAAATGCAACTGATACATATAGTG...GACCTCTATTGCCATACATAAACAAATGAACCCCAAATAATCTCCTTCTTCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGAAGAAGGAGATTATTTGGGGTTCATTTGTTTATGTATGGCAATAGAGGTCAAGTGCTTACCTGAGTaGATAGAACGATTACACCCT | + |
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Preference number: 3 (lower is better) Translates to: LEEGDYLGFICLCMAIEVKCLPE*IERLHP Trigger: AGGGTGTAATCGTTCTATCAACTCAGGTAAGCACTT...GACCTCTATTGCCATACATAAACAAATGAACCCCAAATAATCTCCTTCTTCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR CAA 90 bp | GAACTATATCAGATTAGTAGGGTGACTTTCCTGGTCTTCTACACATTATTTAGCAAGTGCTTACCTGAGTaGATAGAACGATTACACCCT | + |
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Preference number: 3 (lower is better) Translates to: ELYQISRVTFLVFYTLFSKCLPE*IERLHP Trigger: AGGGTGTAATCGTTCTATCAACTCAGGTAAGCACTT...GCTAAATAATGTGTAGAAGACCAGGAAAGTCACCCTACTAATCTGATATAGTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR TCA 72 bp | AATGTATCAGCAGGCAGGAGATTGACTGTGCTTCTCTaGATCTACCATTATCACTATATGTATCAGTTGCAT | + |
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Preference number: 3 (lower is better) Translates to: NVSAGRRLTVLL*IYHYHYMYQLH Trigger: ATGCAACTGATACATATAGTGATAATGGTAGATTCAGAGAAGCACAGTCAATCTCCTGCCTGCTGATACATT 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR TCA 72 bp | GTAGTCCTGGAGAGGAAGGTCAGTGATAAGAGTACTTaGCTTGTATATACTAAATGCGAGAACACAAATAAG | + |
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Preference number: 3 (lower is better) Translates to: VVLERKVSDKST*LVYTKCENTNK Trigger: CTTATTTGTGTTCTCGCATTTAGTATATACAAGTCAAGTACTCTTATCACTGACCTTCCTCTCCAGGACTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR CAA 90 bp | GAACTATATCAGATTAGTAGGGTGACTTTCCTGGTCTTCTACACATTATTTAGCTCCTTGACTCAGCAGTaGTTGAAAAATATGTGGCAT | + |
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Preference number: 3 (lower is better) Translates to: ELYQISRVTFLVFYTLFSSLTQQ*LKNMWH Trigger: ATGCCACATATTTTTCAACAACTGCTGAGTCAAGGA...GCTAAATAATGTGTAGAAGACCAGGAAAGTCACCCTACTAATCTGATATAGTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGAAGAAGGAGATTATTTGGGGTTCATTTGTTTATGTATGGCAATAGAGGTCTCTAGATCATTCTCCTaGACTCAGCAGTTGTTGAAA | + |
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Preference number: 3 (lower is better) Translates to: LEEGDYLGFICLCMAIEVSRSFS*TQQLLK Trigger: TTTCAACAACTGCTGAGTCAAGGAGAATGATCTAGA...GACCTCTATTGCCATACATAAACAAATGAACCCCAAATAATCTCCTTCTTCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR TCA 72 bp | GCCAAATGTAATCAAGTTGACAATAAAGTGCTTACCTaGGTTGATAGAACGATTACACCCTGTACAAGTAGA | + |
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Preference number: 3 (lower is better) Translates to: AKCNQVDNKVLT*VDRTITPCTSR Trigger: TCTACTTGTACAGGGTGTAATCGTTCTATCAACTCAGGTAAGCACTTTATTGTCAACTTGATTACATTTGGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR GCA 72 bp | CTAGTGTTGCCAAATGTAATCAAGTTGACAATAAAGTaGTTACCTGAGTTGATAGAACGATTACACCCTGTA | + |
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Preference number: 3 (lower is better) Translates to: LVLPNVIKLTIK*LPELIERLHPV Trigger: TACAGGGTGTAATCGTTCTATCAACTCAGGTAAGCACTTTATTGTCAACTTGATTACATTTGGCAACACTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR CCA 72 bp | TTAAGGTCAAGAACATTTTCTACTCTTTCTGAGGGTTaGAGTTCAGTTCTAAACAACTTTGAATGGCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: LRSRTFSTLSEG*SSVLNNFEWLR Trigger: TCTGAGCCATTCAAAGTTGTTTAGAACTGAACTCCAACCCTCAGAAAGAGTAGAAAATGTTCTTGACCTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR-3UTR CAA 90 bp | GAACTATATCAGATTAGTAGGGTGACTTTCCTGGTCTTCTACACATTATTTAGCTTGACTCAGCAGTTGTaGAAAAATATGTGGCATACA | + |
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Preference number: 3 (lower is better) Translates to: ELYQISRVTFLVFYTLFSLTQQL*KNMWHT Trigger: TGTATGCCACATATTTTTCAACAACTGCTGAGTCAA...GCTAAATAATGTGTAGAAGACCAGGAAAGTCACCCTACTAATCTGATATAGTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| CDS-3UTR CCA 90 bp | CATCCACGGGTAATATTAAAACTTCTCATAATGACCCCTTCCCTGGGATTGAAAGCAACAAAGCATCCCTaGCTCAGGCAGCCAGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: HPRVILKLLIMTPSLGLKATKHP*LRQPAK Trigger: TTTTGCTGGCTGCCTGAGCCAGGGATGCTTTGTTGC...TTTCAATCCCAGGGAAGGGGTCATTATGAGAAGTTTTAATATTACCCGTGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| CDS-3UTR TCA 90 bp | CATCCACGGGTAATATTAAAACTTCTCATAATGACCCCTTCCCTGGGATTGAAAGCAAAAGTGATCCTCTaGTCCTGTGTTTGTATATTC | + |
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Preference number: 4 (lower is better) Translates to: HPRVILKLLIMTPSLGLKAKVIL*SCVCIF Trigger: GAATATACAAACACAGGATCAGAGGATCACTTTTGC...TTTCAATCCCAGGGAAGGGGTCATTATGAGAAGTTTTAATATTACCCGTGGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| CDS-3UTR TCA 90 bp | GCAACTCCAGAGGATCCAGTACACTGTAATAACTTCTGTAGCTATATCATCAGAGCAAAAGTGATCCTCTaGTCCTGTGTTTGTATATTC | + |
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Preference number: 4 (lower is better) Translates to: ATPEDPVHCNNFCSYIIRAKVIL*SCVCIF Trigger: GAATATACAAACACAGGATCAGAGGATCACTTTTGC...TCTGATGATATAGCTACAGAAGTTATTACAGTGTACTGGATCCTCTGGAGTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| CDS-3UTR TCA 90 bp | TTGGAAGAAGGAGATTATTTGGGGTTCATTTGTTTATGTATGGCAATAGAGGTCAGAAGCAGGGATTCATaGGGACTGTGTATCTTAGAG | + |
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Preference number: 4 (lower is better) Translates to: LEEGDYLGFICLCMAIEVRSRDS*GLCILE Trigger: CTCTAAGATACACAGTCCTCATGAATCCCTGCTTCT...GACCTCTATTGCCATACATAAACAAATGAACCCCAAATAATCTCCTTCTTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| CDS-3UTR TCA 90 bp | GAACTATATCAGATTAGTAGGGTGACTTTCCTGGTCTTCTACACATTATTTAGCAGAAGCAGGGATTCATaGGGACTGTGTATCTTAGAG | + |
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Preference number: 4 (lower is better) Translates to: ELYQISRVTFLVFYTLFSRSRDS*GLCILE Trigger: CTCTAAGATACACAGTCCTCATGAATCCCTGCTTCT...GCTAAATAATGTGTAGAAGACCAGGAAAGTCACCCTACTAATCTGATATAGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| CDS-3UTR TCA 90 bp | GAACTATATCAGATTAGTAGGGTGACTTTCCTGGTCTTCTACACATTATTTAGCATATCAAGATGTTGTTaGTTAGGCTGTCAGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: ELYQISRVTFLVFYTLFSISRCC*LGCQNR Trigger: CCTGTTCTGACAGCCTAATCAACAACATCTTGATAT...GCTAAATAATGTGTAGAAGACCAGGAAAGTCACCCTACTAATCTGATATAGTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| 3UTR CAA 72 bp | AATGTAATCAAGTTGACAATAAAGTGCTTACCTGAGTaGATAGAACGATTACACCCTGTACAAGTAGACCTT | + |
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Preference number: 4 (lower is better) Translates to: NVIKLTIKCLPE*IERLHPVQVDL Trigger: AAGGTCTACTTGTACAGGGTGTAATCGTTCTATCAACTCAGGTAAGCACTTTATTGTCAACTTGATTACATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| CDS-3UTR CAA 90 bp | GCAACTCCAGAGGATCCAGTACACTGTAATAACTTCTGTAGCTATATCATCAGATCAGAACAGGCAAGCTaGAGGATTTGTGCAATTTCA | + |
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Preference number: 5 (lower is better) Translates to: ATPEDPVHCNNFCSYIIRSEQAS*RICAIS Trigger: TGAAATTGCACAAATCCTCAAGCTTGCCTGTTCTGA...TCTGATGATATAGCTACAGAAGTTATTACAGTGTACTGGATCCTCTGGAGTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| CDS-3UTR CAA 90 bp | CATCCACGGGTAATATTAAAACTTCTCATAATGACCCCTTCCCTGGGATTGAAATCAGAACAGGCAAGCTaGAGGATTTGTGCAATTTCA | + |
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Preference number: 5 (lower is better) Translates to: HPRVILKLLIMTPSLGLKSEQAS*RICAIS Trigger: TGAAATTGCACAAATCCTCAAGCTTGCCTGTTCTGA...TTTCAATCCCAGGGAAGGGGTCATTATGAGAAGTTTTAATATTACCCGTGGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| CDS-3UTR CAA 90 bp | GCAACTCCAGAGGATCCAGTACACTGTAATAACTTCTGTAGCTATATCATCAGACCATGGCAATCTTCTTaGGTGAATCAATTACATTTG | + |
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Preference number: 5 (lower is better) Translates to: ATPEDPVHCNNFCSYIIRPWQSS*VNQLHL Trigger: CAAATGTAATTGATTCACCAAAGAAGATTGCCATGG...TCTGATGATATAGCTACAGAAGTTATTACAGTGTACTGGATCCTCTGGAGTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| CDS-3UTR CAA 90 bp | GAACTATATCAGATTAGTAGGGTGACTTTCCTGGTCTTCTACACATTATTTAGCCCATGGCAATCTTCTTaGGTGAATCAATTACATTTG | + |
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Preference number: 5 (lower is better) Translates to: ELYQISRVTFLVFYTLFSPWQSS*VNQLHL Trigger: CAAATGTAATTGATTCACCAAAGAAGATTGCCATGG...GCTAAATAATGTGTAGAAGACCAGGAAAGTCACCCTACTAATCTGATATAGTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| CDS TCA 72 bp | CAACAAAGCATCCCTGGCTCAGGCAGCCAGCAAAAGTaGTCCTCTGATCCTGTGTTTGTATATTCACCAACA | + |
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Preference number: 6 (lower is better) Translates to: QQSIPGSGSQQK*SSDPVFVYSPT Trigger: TGTTGGTGAATATACAAACACAGGATCAGAGGATCACTTTTGCTGGCTGCCTGAGCCAGGGATGCTTTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074986.7 ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| CDS CCA 72 bp | CATAGGCCATTATTCCAAGGAGAAAACACTCAAAGATaGTACAAACAGCAACAAAGCATCCCTGGCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: HRPLFQGENTQR*YKQQQSIPGSG Trigger: GCCTGAGCCAGGGATGCTTTGTTGCTGTTTGTACCATCTTTGAGTGTTTTCTCCTTGGAATAATGGCCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074986.7 ENSMUST00000212730.3 ENSMUST00000215981.2 |
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| CDS CAA 90 bp | TTGGAGGAACTATTGAATACATCACTGAAGCCATGGCAATCTTCTTaGGTGAATCAATTACATTTGAGGAAATGTATACACCAAAACCTG | + |
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Preference number: 6 (lower is better) Translates to: LEELLNTSLKPWQSS*VNQLHLRKCIHQNL Trigger: CAGGTTTTGGTGTATACATTTCCTCAAATGTAATTGATTCACCAAAGAAGATTGCCATGGCTTCAGTGATGTATTCAATAGTTCCTCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074986.7 ENSMUST00000212730.3 ENSMUST00000215981.2 |
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